CaUC06G107410 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATACCACCAAAACGATGCGTTTACCTCCTCGTAGATTAATGACGTCACCCAGGCCCAATAAGAGAAAAGAAAGAGAGGGCCTTGATGATGAGGCCCACCAACTATCATTAACGGCTAAAGTACCGAGGCAGCCGCCGCCGTCTCATGCGAACCAGCTCTTAGCCGGCTACTTGGCTCACGAGTTCCTCACTAAAGGGACTCTCTTCGGCCAGGCTTGGGATCCTGATCTTCCGGATCCGACTATGGCTTCTTCACTCCCTGAGCCAAGCGAGAAACGCCAAGCCGAACTGCACCCCAAGAGTTACCAATCCTACGTGGAGGTAGCTAATTTGTTGAAACATAGTGGGCCCCACTTTCAAGGTATTGTAAATCCCACCCAGCTAGCTCACTTGCTAAACTTATGA ATGAATACCACCAAAACGATGCGTTTACCTCCTCGTAGATTAATGACGTCACCCAGGCCCAATAAGAGAAAAGAAAGAGAGGGCCTTGATGATGAGGCCCACCAACTATCATTAACGGCTAAAGTACCGAGGCAGCCGCCGCCGTCTCATGCGAACCAGCTCTTAGCCGGCTACTTGGCTCACGAGTTCCTCACTAAAGGGACTCTCTTCGGCCAGGCTTGGGATCCTGATCTTCCGGATCCGACTATGGCTTCTTCACTCCCTGAGCCAAGCGAGAAACGCCAAGCCGAACTGCACCCCAAGAGTTACCAATCCTACGTGGAGGTAGCTAATTTGTTGAAACATAGTGGGCCCCACTTTCAAGGTATTGTAAATCCCACCCAGCTAGCTCACTTGCTAAACTTATGA ATGAATACCACCAAAACGATGCGTTTACCTCCTCGTAGATTAATGACGTCACCCAGGCCCAATAAGAGAAAAGAAAGAGAGGGCCTTGATGATGAGGCCCACCAACTATCATTAACGGCTAAAGTACCGAGGCAGCCGCCGCCGTCTCATGCGAACCAGCTCTTAGCCGGCTACTTGGCTCACGAGTTCCTCACTAAAGGGACTCTCTTCGGCCAGGCTTGGGATCCTGATCTTCCGGATCCGACTATGGCTTCTTCACTCCCTGAGCCAAGCGAGAAACGCCAAGCCGAACTGCACCCCAAGAGTTACCAATCCTACGTGGAGGTAGCTAATTTGTTGAAACATAGTGGGCCCCACTTTCAAGGTATTGTAAATCCCACCCAGCTAGCTCACTTGCTAAACTTATGA MNTTKTMRLPPRRLMTSPRPNKRKEREGLDDEAHQLSLTAKVPRQPPPSHANQLLAGYLAHEFLTKGTLFGQAWDPDLPDPTMASSLPEPSEKRQAELHPKSYQSYVEVANLLKHSGPHFQGIVNPTQLAHLLNL Homology
BLAST of CaUC06G107410 vs. NCBI nr
Match: XP_038906548.1 (uncharacterized protein LOC120092519 [Benincasa hispida]) HSP 1 Score: 215.7 bits (548), Expect = 2.5e-52 Identity = 120/147 (81.63%), Postives = 123/147 (83.67%), Query Frame = 0
BLAST of CaUC06G107410 vs. NCBI nr
Match: KAG7014604.1 (hypothetical protein SDJN02_24783, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 189.1 bits (479), Expect = 2.5e-44 Identity = 101/133 (75.94%), Postives = 109/133 (81.95%), Query Frame = 0
BLAST of CaUC06G107410 vs. NCBI nr
Match: XP_011656778.1 (uncharacterized protein LOC105435768 [Cucumis sativus] >KGN46382.1 hypothetical protein Csa_005722 [Cucumis sativus]) HSP 1 Score: 184.9 bits (468), Expect = 4.6e-43 Identity = 111/164 (67.68%), Postives = 116/164 (70.73%), Query Frame = 0
BLAST of CaUC06G107410 vs. NCBI nr
Match: KAA0039884.1 (uncharacterized protein E6C27_scaffold122G001610 [Cucumis melo var. makuwa]) HSP 1 Score: 179.1 bits (453), Expect = 2.5e-41 Identity = 107/166 (64.46%), Postives = 115/166 (69.28%), Query Frame = 0
BLAST of CaUC06G107410 vs. NCBI nr
Match: XP_008459949.1 (PREDICTED: uncharacterized protein LOC103498915 [Cucumis melo]) HSP 1 Score: 178.7 bits (452), Expect = 3.3e-41 Identity = 107/167 (64.07%), Postives = 115/167 (68.86%), Query Frame = 0
BLAST of CaUC06G107410 vs. ExPASy TrEMBL
Match: A0A0A0KDC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G088100 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 2.2e-43 Identity = 111/164 (67.68%), Postives = 116/164 (70.73%), Query Frame = 0
BLAST of CaUC06G107410 vs. ExPASy TrEMBL
Match: A0A5A7T8V2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G001610 PE=4 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 1.2e-41 Identity = 107/166 (64.46%), Postives = 115/166 (69.28%), Query Frame = 0
BLAST of CaUC06G107410 vs. ExPASy TrEMBL
Match: A0A1S3CBD7 (uncharacterized protein LOC103498915 OS=Cucumis melo OX=3656 GN=LOC103498915 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 1.6e-41 Identity = 107/167 (64.07%), Postives = 115/167 (68.86%), Query Frame = 0
BLAST of CaUC06G107410 vs. ExPASy TrEMBL
Match: A0A2P5XWB4 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A07G232800v1 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 4.3e-26 Identity = 77/144 (53.47%), Postives = 89/144 (61.81%), Query Frame = 0
BLAST of CaUC06G107410 vs. ExPASy TrEMBL
Match: A0A5D2PWX7 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A07G249800v1 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 4.3e-26 Identity = 77/144 (53.47%), Postives = 89/144 (61.81%), Query Frame = 0
BLAST of CaUC06G107410 vs. TAIR 10
Match: AT5G44060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 92.0 bits (227), Expect = 3.8e-19 Identity = 60/148 (40.54%), Postives = 78/148 (52.70%), Query Frame = 0
BLAST of CaUC06G107410 vs. TAIR 10
Match: AT1G04000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44060.1); Has 62 Blast hits to 62 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 87.4 bits (215), Expect = 9.4e-18 Identity = 62/154 (40.26%), Postives = 79/154 (51.30%), Query Frame = 0
BLAST of CaUC06G107410 vs. TAIR 10
Match: AT3G23440.1 (embryo sac development arrest 6 ) HSP 1 Score: 62.0 bits (149), Expect = 4.2e-10 Identity = 36/84 (42.86%), Postives = 50/84 (59.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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