CaUC05G103430 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGTGGCAACAGGATTGCTCATACTTTGCTCCATCGAGCTCGAATCGCCTCCGTTTCCTCTTCACTCTCCTCCGTCGGAGCACCGTCTTCCATAGTCTGTGGCTCCGAAGCAACGTCTTCTCAAAGTGCTTGCTCCTCTTCCTCCCGTCGCAACTACACATTCGCCTTTTCCCCCGCTGCAACCCTGCGGTTATTCAATACCAACTCGTCTAAAGACTTTCAAGATGAAGTGAAAGAACATAATCCACCCCAGTGTACGGATGCGTTTTCTTATTCTTATGCAATCCGTCAATTCTCTTATTTTGACGCTTCAATCGAGATTACCGTTTGTAATATGATTAATTAATGGCTCTGCGTAGTTTTTTGCTGCAGATGGTGTTTTCTGTTTAGTGGAATATCTTACTAAGAGTGTGGTGTGATTCAGTCATGTTCAGTTGTTTTGATTGTTGAACTGCTTATCTAGTGTATTATGTTTCGTCGAGCTTTTTGTTCCTTTATTTATCCATGCAGTTCTAACGCTTGAAAAGCTTTATGATTACAATATTATATGACTAGTTGCTTTGAGTGTCGATAACCGGTGATTGTTGTAGTGTTATTTGTAAAATTTTTAGTGGGCGTTTGAGGTACTGAGTTGGTTATTATAGTTTGTAGGTTATAATAGTATTTTTTTGGGTGTAGATTATTTTAGTCTGTGTTTGGGGTGCAAATTATTTTGGTTTGACAAAGAAGGAAAAAGATGATGACTAGGAAATAGTAAACACTACAGCAAATAGGGATATGAAATAGTAATTATGCTGTTAATTGTAAGTTACAATAGTTGAAAACATCAATCGGTGTAATTGGTGCCCCAAACATGTAGCCCACTCCATGAACTTCAAGTTGGTGGGCCAAACACCTTTAAGTGTAAAATGATAATGGTGTACTATAGATTTGATGCATAAGAGGTCCCCTTCGCTTCAGTCTATGAAGTTTTCCCCATTCTAATGATAGTGTGTAAAATGATAATGGTGTACTATAGATTTGATGCATAAGGTCCCCTTCGCTTCAGTCTATGAAGTTTTCCCCATTCTAATGATGATATTAGTGTGTTCGTTGCTAGTTGTACATTTGTCCAGCTATTTTTTACTCTCTTACAGCCAATATTGGCTATTGGAATTTCTAATTCAAGACTTGTTTAAGCAATGCCTAAAGCTTGAGGCCTCAATCTTGGAAATCTCTGAACTTTTGTAGATGGGAGGGATGAACGGGGAGAAACCACGGATGGATGGGAAGAAGACGATGATCTGGAACCTGAGGTAATTCCATCTACTGAACTGAGCTTTTTATTTCACTATTATTATAGCCATAGGTGATGCTAATTGTTGATAACATAGCTTGGTGATGGAGGGGGTGGTGGCGGTGTTGTTTTGCAAGGCGTACCATGGGGTGAGCATGTTCTTCTTCTTGCTCAAGAGGTCCTGCGGCAATTTGGTGATGACATAAAACTCTATTCTTTCAAGACCACTCCACGTGGATACATTTATGTCAGATTAGACAAACTCTCAAACGAGTAATTTTCTTCTTTTTGTTTGTTCATATTTTTCTCACATAAGAGCTATGCGTTCTATCTTCTGAGTACTGGGGAATTTGATTTGCAGTCGCATTTTAAGCCCTTTTTGCTTGTGGGAGAGATTAGCAATCAACTCAACCTTGTCTTCTAATAACAGGAGAACAAGAATAATGATAAACTCAACTGTCTCCAAACTTTTTAAATTTTATTTCAACCTTTCTCTTTGTCACCATGAATTTGGCTGACTCTGACGGTTGTGTTATCCCCAACTAGTTAATATTGAAAATTTCTATTCTTTGCTGAGAATCTATTCGTTTTTGTTTGAGTTATATATTTGTTTTTGGATAGGAAATCTGTAGTCATGTATTTGTGATGATAGCATAACCATGAAAACAAACTGAGGTGGGCATTCAGTCAGTTTGAATTTCATAATTAAGAATTACAGGCTGCTTTAACTTGGATTTATGAATTTACAATTTATAAAATATTATTCTCTTCTTAGATTTGGTTGTCCCGGCTTGGAGGAGCTTGAGAGTTATAGCCAAGAGTACAAGAAAAGATTAGATGAAACTGGAGCACTTGGAAATATTCCCGATGATTTAGCTTTTGAGGTAATAGCTGATAGACTTTGCTATCCATCCCTACTGTACAAAAATGATTACTTAGTGGTTAGTGCACACTTATGGCTGCATACATTAAAACCTTTACAATCATGCTTCTGTTGAAGGTATCATCTCCAGGTGCAGAGAGGTTACTGAAGGTCCCAGATGATCTGTTTAGATTCAAAGCCATGCCAATGCGAGTTTCCTACATTGAAGACGTAGACTTGAGAGGCACTGAAAATGATGGAGTTTTTATGCTGGATCATGTAGAATTAGAATCTAAGAGCTGTATTTGGAAATTGGCAAATGTGAGGGAAAACCGAGATCCTTTAAGTAAGGGTAGGCCTTTGACTCGCAAGCAGAAAGAATGGAGGTTAAAGTTACCCTATGCAAATCATAAGAAGGTATTCCTTTACATTGAATGCTGAATGTCAGCACCTGAAGGTCCAAAAGAAAGCATGGGTGTCCTTATTTCATGAGGTTAGTTTTAGTTTTACAGTGGCATTATTTCTATTTGAGGTCTTGGAGCTTTTCCAATTGGACACTTTCTTCTGTTTGGAAAAGCTGTCTGTAGCTCAAGCTTTATTTTCTAATAGGATATTTTTCTTCTTTTGGAATTGATATCTTTGTAAGGACTTGGTATATTTGGTATATCTTCCAGCTCTGCTTATGTCAGCTCTTCAACTGATATTTCTTTTCTCAACTATATTGAACTTCAAAGTTGATATTTTTTCCCCTAATCTAATTCGTTTTCACGACCTAAGTGGTGTTTTCTTTTAGATATATATTCTCTTTCATTTACTAGGTCCCCCCCTTTCCCTTCACTGCACTTCTGGCGTAATCTTTTAATACTTGCTCTTAAACTTGGGCTTCTCTTTTGGTATTGCCTCTCTCTCTCTTTCTACTCTATTGGTTAAAGTTCTGTAAATCAGAGTAAGTGTCTTTTTCACCCTTTCCCAGTCGATATAAGCATTTTCCCTTTATCAATTTATTCTGTGATAATCTCATTATCTAAGTTGCATGCGCATTAGTTGTTGTGAAAGCCTTGAAGATTTTTCCTTTATCGCATTATATGGTAAGAATATTCTTGCATGGTACATCCCAGCAGGATTTTAACTTTAAAATAAAAATAAAAGTGCAGATATATAGCTGTCTTACACGTTGATTAAACAAAGAGCTGATTCAGTTAGATGGTCATGGGAACAAAATTGGTTGACTTCGTATTATACGCATTTGGTTTGCTGACGTTAAAATCTTGAAAAAAGAGTGAGGTATTGCCCTTCTTGATTTGATTCTTTCTATAAGAATGTTGAATTAAAACTATTTGAATAAAACCATCATGGGTTGGATTAGTGGCAGTTGGAATATTTTAAAAAGTCCAAATGGCCAAGGGGTTATGGGTTCAATCCATGATGACCATCTATCTAGGATTTAATATCCTACGGATTTCCTTGACACCCAAATGTTGTCAGGTCAGGGGGTTATCCCGTGAGATTAGTCGAGGTGCGTGTAAGTTGGCTCGAACCCTCACGGATATTAAAAAAAAAAAATTATTTGAATAATATTCACGAGAATGATATTGTTTATTTTAGAGTAACATTTAGAGTGATGTCATTTTGAATCTACCACATCAAAGAAGTATAAGAATGACAACATTACGATTCCTAGAAGAATAATACTTTGCTGAAAGATACTAGAAAGCTTGAGCATATTTTTTTAGTATGATTCAATATTAAATATATAGCTTTTTCCTCCTATCCTTGACCCAATAGAAATAAACATATAAAAGATTAAGTAAAATTTCTTATTAACTTATGTGTAACAAAAAATTTCTTCTCTTCTACTAGAACAACATTCATCCATGCATATTACACAATAGAACCATAAGAGCTGACGGTCTTTTGGAGGACATCCAACTGAGCCACAGTAATCTTATCATCCATCACGGCTGGAGGGTCAGTTAACAAATTTCAAACTTGGCACGTATTGTTTGTCACACTCGTAGAACGAGCCAACGAGGAGTACTTTTCCTAAGTGGTTATAGATCCTACGAGTAATTTGTACATTAATGAAACTCATCTGAATGGTTTAGTTGCTTTTGGGTAGTGAAATGTCCACCACAAGGTCTTGTGCTTCTCCTGTTTGTATATATATATATATATATTTATTTATTTATTTTTTTTCCTTCTTTCTTTTTCAGCCCGTCTCCGTCAGCAGTAAAGTATTTTGTGGGTGTTAGCTCTCTAATTCCTCTTTCTAAATTTGTCTCAGTTCATTTTTGTTCTCTCTGACTCAACCTCATCTCTTTTGTTTGTTCATAGCTAACTACCACAAATTAATAAAGTTTTAGCGGTATTTTATTTTTCAATATTTGATAATTACAAATAACGTGGCATCATATAATCTATCTATGATATTATTTTTCTCACAGGTCTGTTGACATCAATATTTCCATCATGAATATATAAACTCTACATTTTATCTATGATAACAGGCACATTCAACAAAGGTAGAGCCAAGATACTTATTGTCAATCAAAAGGAGGTGTCCATGTTGCCATGTTGGGCAGGCCCCCGGCTGTAGAGATAGATAGCTCATTATGGATAAGTGGACCACTGAATGGTTTTATTATTTCTTAGAAAGAAAATTCATGTTGCATCATGTGCTTTGGACATATCCTTTCTCACTAATTGACAAGAACCGATTTAGGTCCAATTACAACCCCATTCAGCTTGGGCATTGTAGTTATTCTGGTTTTTGCATGAACAAGTCCCTTTCATGAGTACCTACTTCTGTACATTTTGCACCTCTCCTTCAATAAAAAAGTTGCCTGATGTCAGAAGAAAACAACTTGGGAAATTTTGGAGGTATTAAATAATTTC ATGCGTGGCAACAGGATTGCTCATACTTTGCTCCATCGAGCTCGAATCGCCTCCGTTTCCTCTTCACTCTCCTCCGTCGGAGCACCGTCTTCCATAGTCTGTGGCTCCGAAGCAACGTCTTCTCAAAGTGCTTGCTCCTCTTCCTCCCGTCGCAACTACACATTCGCCTTTTCCCCCGCTGCAACCCTGCGGTTATTCAATACCAACTCGTCTAAAGACTTTCAAGATGAAGTGAAAGAACATAATCCACCCCAGTGTACGGATGCGTTTTCTTATTCTTATGCAATCCGTCAATTCTCTTATTTTGACGCTTCAATCGAGATTACCGTTTATGGGAGGGATGAACGGGGAGAAACCACGGATGGATGGGAAGAAGACGATGATCTGGAACCTGAGCTTGGTGATGGAGGGGGTGGTGGCGGTGTTGTTTTGCAAGGCGTACCATGGGGTGAGCATGTTCTTCTTCTTGCTCAAGAGGTCCTGCGGCAATTTGGTGATGACATAAAACTCTATTCTTTCAAGACCACTCCACGTGGATACATTTATGTCAGATTAGACAAACTCTCAAACGAATTTGGTTGTCCCGGCTTGGAGGAGCTTGAGAGTTATAGCCAAGAGTACAAGAAAAGATTAGATGAAACTGGAGCACTTGGAAATATTCCCGATGATTTAGCTTTTGAGGTATCATCTCCAGGTGCAGAGAGGTTACTGAAGGTCCCAGATGATCTGTTTAGATTCAAAGCCATGCCAATGCGAGTTTCCTACATTGAAGACGTAGACTTGAGAGGCACTGAAAATGATGGAGTTTTTATGCTGGATCATGTAGAATTAGAATCTAAGAGCTGTATTTGGAAATTGGCAAATGTGAGGGAAAACCGAGATCCTTTAAGTAAGGGTAGGCCTTTGACTCGCAAGCAGAAAGAATGGAGGTTAAAGTTACCCTATGCAAATCATAAGAAGGTATTCCTTTACATTGAATGCTGAATGTCAGCACCTGAAGGTCCAAAAGAAAGCATGGGTGTCCTTATTTCATGAGGCACATTCAACAAAGGTAGAGCCAAGATACTTATTGTCAATCAAAAGGAGGTGTCCATGTTGCCATGTTGGGCAGGCCCCCGGCTGTAGAGATAGATAGCTCATTATGGATAAGTGGACCACTGAATGGTTTTATTATTTCTTAGAAAGAAAATTCATGTTGCATCATGTGCTTTGGACATATCCTTTCTCACTAATTGACAAGAACCGATTTAGGTCCAATTACAACCCCATTCAGCTTGGGCATTGTAGTTATTCTGGTTTTTGCATGAACAAGTCCCTTTCATGAGTACCTACTTCTGTACATTTTGCACCTCTCCTTCAATAAAAAAGTTGCCTGATGTCAGAAGAAAACAACTTGGGAAATTTTGGAGGTATTAAATAATTTC ATGCGTGGCAACAGGATTGCTCATACTTTGCTCCATCGAGCTCGAATCGCCTCCGTTTCCTCTTCACTCTCCTCCGTCGGAGCACCGTCTTCCATAGTCTGTGGCTCCGAAGCAACGTCTTCTCAAAGTGCTTGCTCCTCTTCCTCCCGTCGCAACTACACATTCGCCTTTTCCCCCGCTGCAACCCTGCGGTTATTCAATACCAACTCGTCTAAAGACTTTCAAGATGAAGTGAAAGAACATAATCCACCCCAGTGTACGGATGCGTTTTCTTATTCTTATGCAATCCGTCAATTCTCTTATTTTGACGCTTCAATCGAGATTACCGTTTATGGGAGGGATGAACGGGGAGAAACCACGGATGGATGGGAAGAAGACGATGATCTGGAACCTGAGCTTGGTGATGGAGGGGGTGGTGGCGGTGTTGTTTTGCAAGGCGTACCATGGGGTGAGCATGTTCTTCTTCTTGCTCAAGAGGTCCTGCGGCAATTTGGTGATGACATAAAACTCTATTCTTTCAAGACCACTCCACGTGGATACATTTATGTCAGATTAGACAAACTCTCAAACGAATTTGGTTGTCCCGGCTTGGAGGAGCTTGAGAGTTATAGCCAAGAGTACAAGAAAAGATTAGATGAAACTGGAGCACTTGGAAATATTCCCGATGATTTAGCTTTTGAGGTATCATCTCCAGGTGCAGAGAGGTTACTGAAGGTCCCAGATGATCTGTTTAGATTCAAAGCCATGCCAATGCGAGTTTCCTACATTGAAGACGTAGACTTGAGAGGCACTGAAAATGATGGAGTTTTTATGCTGGATCATGTAGAATTAGAATCTAAGAGCTGTATTTGGAAATTGGCAAATGTGAGGGAAAACCGAGATCCTTTAAGTAAGGGTAGGCCTTTGACTCGCAAGCAGAAAGAATGGAGGTTAAAGTTACCCTATGCAAATCATAAGAAGGTATTCCTTTACATTGAATGCTGA MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIVCGSEATSSQSACSSSSRRNYTFAFSPAATLRLFNTNSSKDFQDEVKEHNPPQCTDAFSYSYAIRQFSYFDASIEITVYGRDERGETTDGWEEDDDLEPELGDGGGGGGVVLQGVPWGEHVLLLAQEVLRQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTENDGVFMLDHVELESKSCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYIEC Homology
BLAST of CaUC05G103430 vs. NCBI nr
Match: XP_038891543.1 (uncharacterized protein LOC120080930 [Benincasa hispida] >XP_038891544.1 uncharacterized protein LOC120080930 [Benincasa hispida]) HSP 1 Score: 531.9 bits (1369), Expect = 3.8e-147 Identity = 275/327 (84.10%), Postives = 284/327 (86.85%), Query Frame = 0
BLAST of CaUC05G103430 vs. NCBI nr
Match: XP_008446453.1 (PREDICTED: uncharacterized protein LOC103489189 isoform X3 [Cucumis melo] >XP_016900168.1 PREDICTED: uncharacterized protein LOC103489189 isoform X3 [Cucumis melo]) HSP 1 Score: 495.0 bits (1273), Expect = 5.1e-136 Identity = 256/328 (78.05%), Postives = 276/328 (84.15%), Query Frame = 0
BLAST of CaUC05G103430 vs. NCBI nr
Match: XP_011655714.1 (uncharacterized protein LOC101211568 [Cucumis sativus] >KGN51986.1 hypothetical protein Csa_008608 [Cucumis sativus]) HSP 1 Score: 485.0 bits (1247), Expect = 5.3e-133 Identity = 253/328 (77.13%), Postives = 272/328 (82.93%), Query Frame = 0
BLAST of CaUC05G103430 vs. NCBI nr
Match: KAG7013097.1 (rimP, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 484.6 bits (1246), Expect = 6.9e-133 Identity = 251/331 (75.83%), Postives = 271/331 (81.87%), Query Frame = 0
BLAST of CaUC05G103430 vs. NCBI nr
Match: XP_022944994.1 (uncharacterized protein LOC111449365 [Cucurbita moschata]) HSP 1 Score: 483.4 bits (1243), Expect = 1.5e-132 Identity = 250/331 (75.53%), Postives = 271/331 (81.87%), Query Frame = 0
BLAST of CaUC05G103430 vs. ExPASy Swiss-Prot
Match: Q72NX1 (Ribosome maturation factor RimP OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) OX=267671 GN=rimP PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 7.2e-08 Identity = 39/107 (36.45%), Postives = 57/107 (53.27%), Query Frame = 0
BLAST of CaUC05G103430 vs. ExPASy Swiss-Prot
Match: Q8F7K3 (Ribosome maturation factor RimP OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) OX=189518 GN=rimP PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 7.2e-08 Identity = 39/107 (36.45%), Postives = 57/107 (53.27%), Query Frame = 0
BLAST of CaUC05G103430 vs. ExPASy Swiss-Prot
Match: B0SH16 (Ribosome maturation factor RimP OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) OX=355278 GN=rimP PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.6e-07 Identity = 32/97 (32.99%), Postives = 55/97 (56.70%), Query Frame = 0
BLAST of CaUC05G103430 vs. ExPASy Swiss-Prot
Match: B0SQH2 (Ribosome maturation factor RimP OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) OX=456481 GN=rimP PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.6e-07 Identity = 32/97 (32.99%), Postives = 55/97 (56.70%), Query Frame = 0
BLAST of CaUC05G103430 vs. ExPASy Swiss-Prot
Match: Q04U33 (Ribosome maturation factor RimP OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) OX=355277 GN=rimP PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 2.1e-07 Identity = 35/92 (38.04%), Postives = 51/92 (55.43%), Query Frame = 0
BLAST of CaUC05G103430 vs. ExPASy TrEMBL
Match: A0A1S3BF38 (uncharacterized protein LOC103489189 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103489189 PE=3 SV=1) HSP 1 Score: 495.0 bits (1273), Expect = 2.5e-136 Identity = 256/328 (78.05%), Postives = 276/328 (84.15%), Query Frame = 0
BLAST of CaUC05G103430 vs. ExPASy TrEMBL
Match: A0A0A0KW71 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606760 PE=3 SV=1) HSP 1 Score: 485.0 bits (1247), Expect = 2.5e-133 Identity = 253/328 (77.13%), Postives = 272/328 (82.93%), Query Frame = 0
BLAST of CaUC05G103430 vs. ExPASy TrEMBL
Match: A0A6J1FZQ6 (uncharacterized protein LOC111449365 OS=Cucurbita moschata OX=3662 GN=LOC111449365 PE=4 SV=1) HSP 1 Score: 483.4 bits (1243), Expect = 7.4e-133 Identity = 250/331 (75.53%), Postives = 271/331 (81.87%), Query Frame = 0
BLAST of CaUC05G103430 vs. ExPASy TrEMBL
Match: A0A1S3BEL4 (uncharacterized protein LOC103489189 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489189 PE=3 SV=1) HSP 1 Score: 480.3 bits (1235), Expect = 6.3e-132 Identity = 250/321 (77.88%), Postives = 269/321 (83.80%), Query Frame = 0
BLAST of CaUC05G103430 vs. ExPASy TrEMBL
Match: A0A1S3BF35 (uncharacterized protein LOC103489189 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489189 PE=3 SV=1) HSP 1 Score: 480.3 bits (1235), Expect = 6.3e-132 Identity = 250/321 (77.88%), Postives = 269/321 (83.80%), Query Frame = 0
BLAST of CaUC05G103430 vs. TAIR 10
Match: AT1G69210.1 (Uncharacterised protein family UPF0090 ) HSP 1 Score: 278.5 bits (711), Expect = 7.0e-75 Identity = 130/211 (61.61%), Postives = 172/211 (81.52%), Query Frame = 0
BLAST of CaUC05G103430 vs. TAIR 10
Match: AT1G77122.1 (Uncharacterised protein family UPF0090 ) HSP 1 Score: 189.1 bits (479), Expect = 5.6e-48 Identity = 97/217 (44.70%), Postives = 142/217 (65.44%), Query Frame = 0
BLAST of CaUC05G103430 vs. TAIR 10
Match: AT1G69210.2 (Uncharacterised protein family UPF0090 ) HSP 1 Score: 148.3 bits (373), Expect = 1.1e-35 Identity = 69/113 (61.06%), Postives = 91/113 (80.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|