CaUC05G086610 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G086610
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Unknown protein
Location	Ciama_Chr05: 6684056 .. 6684753 (-)
RNA-Seq Expression	CaUC05G086610
Synteny	CaUC05G086610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAGAAGTTTAAGGACTAATTTTAACCATGAAAATTAAATTTGAGAATGTGATTACAACTGCCACCCATAACAAAATACTAAGCTCTTAATACTCACTCCGGCGGCCCTATGCAGCCACGCGCTTCTCCGACGAATAGACCCACCAGCAGCGACAACTCGACCGAACCCAACATCGGGAACTTCCCGAGAACCTCCATCCACCGACGGGAATCCGGCAACCCACACGAAGTTTCGGATCCAGGGAATAGCTTCAGATCCGGCGAGGCAGAGCGGACCATGGATGAAGCCCCACGAAGAGTACACGCGTGCACTTCCGATCGACGGCCACCCACTACCGCAGTAGACTCCGGTGCTTCACGGCGATGGCCGATTTTCCTGCACCGAAACAGTGGCCTTCAAGGTAAAGAGGGCTGCTTCATCGAAGAAGATGAAGAGAAGATTGGAGGGAGAAGTCGAAGTCGAAGAAGAAGTGGAGAAAAGAAATTCGGAAAAGTGATGGGCCCATTCATTATTATTATTATTATTATTTTATTTTCTCTGTTTAATATTTATCCTAAAAAGTTCTATTAAAAAAAAAAGAAATTTTTTTTTATCAGGCGCTTGCAATATGATAGTCCGAAGGAAACGGCCAGAAATGGAAGAATCTGATCGATCGCAGCCGTCCGATGTGTTCTCTCTCTACAGTTCCCGGTGA

mRNA sequence

ATGCTAGAACCACGCGCTTCTCCGACGAATAGACCCACCAGCAGCGACAACTCGACCGAACCCAACATCGGGAACTTCCCGAGAACCTCCATCCACCGACGGGAATCCGGCAACCCACACGAAGTTTCGGATCCAGGGAATAGCTTCAGATCCGGCGAGGCAGAGCGGACCATGGATGAAGCCCCACGAAGAGTACACGCGTGCACTTCCGATCGACGGCCACCCACTACCGCAGTAGACTCCGGTGCTTCACGGCGATGGCCGATTTTCCTGCACCGAAACAGTGGCCTTCAAGGTAAAGAGGGCTGCTTCATCGAAGAAGATGAAGAGAAGATTGGAGGGAGAAGTCGAAGTCGAAGAAGAAGCGCTTGCAATATGATAGTCCGAAGGAAACGGCCAGAAATGGAAGAATCTGATCGATCGCAGCCGTCCGATGTGTTCTCTCTCTACAGTTCCCGGTGA

Coding sequence (CDS)

ATGCTAGAACCACGCGCTTCTCCGACGAATAGACCCACCAGCAGCGACAACTCGACCGAACCCAACATCGGGAACTTCCCGAGAACCTCCATCCACCGACGGGAATCCGGCAACCCACACGAAGTTTCGGATCCAGGGAATAGCTTCAGATCCGGCGAGGCAGAGCGGACCATGGATGAAGCCCCACGAAGAGTACACGCGTGCACTTCCGATCGACGGCCACCCACTACCGCAGTAGACTCCGGTGCTTCACGGCGATGGCCGATTTTCCTGCACCGAAACAGTGGCCTTCAAGGTAAAGAGGGCTGCTTCATCGAAGAAGATGAAGAGAAGATTGGAGGGAGAAGTCGAAGTCGAAGAAGAAGCGCTTGCAATATGATAGTCCGAAGGAAACGGCCAGAAATGGAAGAATCTGATCGATCGCAGCCGTCCGATGTGTTCTCTCTCTACAGTTCCCGGTGA

Protein sequence

MLEPRASPTNRPTSSDNSTEPNIGNFPRTSIHRRESGNPHEVSDPGNSFRSGEAERTMDEAPRRVHACTSDRRPPTTAVDSGASRRWPIFLHRNSGLQGKEGCFIEEDEEKIGGRSRSRRRSACNMIVRRKRPEMEESDRSQPSDVFSLYSSR

Homology

The following BLAST results are available for this feature:

BLAST of CaUC05G086610 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC05G086610 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC05G086610 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC05G086610 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC05G086610.1	CaUC05G086610.1	mRNA