CaUC04G075420 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTATGTGTTGTAATTAATAAAATGCATTACAATTTTCACTAGTCATAAACGAACAAGTTATCAAACTCAAACGAGTTTTGTGACAGTAAAGATTGAAATTTTTAAAAAATGACGATAGGCACATCAAGGACAAAATGTGATGGCATAATCAGCTCCACCGGTGCAAGTAAAAGTACTTGTCTTATCATCATAAGCGTAGCTATAAGCTTGCGGACACTGATTCTTGAAAATCATTGAATAATTGGTTGGCGGGCAAGTTTCCGGCTGATTATGGTCGCCACTGCAGCAATATTCAGGCTGATTAAAGGCCATACAAGCACTTTTACAAGCGATCACTGCGCCACCTTCATCTGTAATGGCTAATTCCAGTGGACAAACAGCATTTACATTTCCTGTACAAAGTACCGTTTGGCACGCCCCACCCGAACCGCCAATCGGCGCCACTGAAACAGGTAAATTGAAGCCATCGACAAGGCTGATGTCGAAGAAATCTTGGCCGCCGCTTGACGCAATTGTGAATTCCACTAGGCTTGCTGGCGGAATTCCGCCGGCGCCGTTACATGTGACTTGGCCACTACCACAATCGGCGGTTGCGCAAGAGAACTTTCCACTTGCATCAGTGGAACAGAGTGTTCTTGCCCAAAATCTGCCGGACCACGGCGGAGAAGTCGTTACCGTTGTTGTTGATCCGGGGAGTAATTCGAAGCCAGTGGTTGATAGTTGGTTGCCGGCACCGGTTAAAGCTCCCGGCCAAATTGGGAACGGACAATTGTTTTTAATGGCGAAATTAATTGAGTAA ATGGGCACATCAAGGACAAAATGTGATGGCATAATCAGCTCCACCGGTGCAAGTAAAAGTACTTGTCTTATCATCATAAGCGCCATACAAGCACTTTTACAAGCGATCACTGCGCCACCTTCATCTGTAATGGCTAATTCCAGTGGACAAACAGCATTTACATTTCCTGTACAAAGTACCGTTTGGCACGCCCCACCCGAACCGCCAATCGGCGCCACTGAAACAGGTAAATTGAAGCCATCGACAAGGCTGATGTCGAAGAAATCTTGGCCGCCGCTTGACGCAATTGTGAATTCCACTAGGCTTGCTGGCGGAATTCCGCCGGCGCCGTTACATGTGACTTGGCCACTACCACAATCGGCGGTTGCGCAAGAGAACTTTCCACTTGCATCAGTGGAACAGAGTGTTCTTGCCCAAAATCTGCCGGACCACGGCGGAGAAGTCGTTACCGTTGTTGTTGATCCGGGGAGTAATTCGAAGCCAGTGGTTGATAGTTGGTTGCCGGCACCGGTTAAAGCTCCCGGCCAAATTGGGAACGGACAATTGTTTTTAATGGCGAAATTAATTGAGTAA ATGGGCACATCAAGGACAAAATGTGATGGCATAATCAGCTCCACCGGTGCAAGTAAAAGTACTTGTCTTATCATCATAAGCGCCATACAAGCACTTTTACAAGCGATCACTGCGCCACCTTCATCTGTAATGGCTAATTCCAGTGGACAAACAGCATTTACATTTCCTGTACAAAGTACCGTTTGGCACGCCCCACCCGAACCGCCAATCGGCGCCACTGAAACAGGTAAATTGAAGCCATCGACAAGGCTGATGTCGAAGAAATCTTGGCCGCCGCTTGACGCAATTGTGAATTCCACTAGGCTTGCTGGCGGAATTCCGCCGGCGCCGTTACATGTGACTTGGCCACTACCACAATCGGCGGTTGCGCAAGAGAACTTTCCACTTGCATCAGTGGAACAGAGTGTTCTTGCCCAAAATCTGCCGGACCACGGCGGAGAAGTCGTTACCGTTGTTGTTGATCCGGGGAGTAATTCGAAGCCAGTGGTTGATAGTTGGTTGCCGGCACCGGTTAAAGCTCCCGGCCAAATTGGGAACGGACAATTGTTTTTAATGGCGAAATTAATTGAGTAA MGTSRTKCDGIISSTGASKSTCLIIISAIQALLQAITAPPSSVMANSSGQTAFTFPVQSTVWHAPPEPPIGATETGKLKPSTRLMSKKSWPPLDAIVNSTRLAGGIPPAPLHVTWPLPQSAVAQENFPLASVEQSVLAQNLPDHGGEVVTVVVDPGSNSKPVVDSWLPAPVKAPGQIGNGQLFLMAKLIE Homology
BLAST of CaUC04G075420 vs. NCBI nr
Match: KAF9867878.1 (hypothetical protein H0E87_026561 [Populus deltoides]) HSP 1 Score: 114.0 bits (284), Expect = 1.4e-21 Identity = 80/166 (48.19%), Postives = 91/166 (54.82%), Query Frame = 0
BLAST of CaUC04G075420 vs. NCBI nr
Match: KAB5520191.1 (hypothetical protein DKX38_024510 [Salix brachista]) HSP 1 Score: 101.3 bits (251), Expect = 9.5e-18 Identity = 71/165 (43.03%), Postives = 86/165 (52.12%), Query Frame = 0
BLAST of CaUC04G075420 vs. NCBI nr
Match: OAY83427.1 (hypothetical protein ACMD2_25315 [Ananas comosus]) HSP 1 Score: 95.1 bits (235), Expect = 6.8e-16 Identity = 71/162 (43.83%), Postives = 81/162 (50.00%), Query Frame = 0
BLAST of CaUC04G075420 vs. NCBI nr
Match: KAB8091045.1 (hypothetical protein EE612_016443 [Oryza sativa] >BAS83223.1 Os03g0244333 [Oryza sativa Japonica Group]) HSP 1 Score: 92.8 bits (229), Expect = 3.4e-15 Identity = 57/113 (50.44%), Postives = 66/113 (58.41%), Query Frame = 0
BLAST of CaUC04G075420 vs. NCBI nr
Match: KAB5520105.1 (hypothetical protein DKX38_024424 [Salix brachista]) HSP 1 Score: 88.2 bits (217), Expect = 8.3e-14 Identity = 61/138 (44.20%), Postives = 71/138 (51.45%), Query Frame = 0
BLAST of CaUC04G075420 vs. ExPASy TrEMBL
Match: A0A6N2MKD6 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS383472 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 2.4e-19 Identity = 74/163 (45.40%), Postives = 85/163 (52.15%), Query Frame = 0
BLAST of CaUC04G075420 vs. ExPASy TrEMBL
Match: A0A5N5JLH5 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_024510 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 4.6e-18 Identity = 71/165 (43.03%), Postives = 86/165 (52.12%), Query Frame = 0
BLAST of CaUC04G075420 vs. ExPASy TrEMBL
Match: A0A199W1T3 (Uncharacterized protein OS=Ananas comosus OX=4615 GN=ACMD2_25315 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 3.3e-16 Identity = 71/162 (43.83%), Postives = 81/162 (50.00%), Query Frame = 0
BLAST of CaUC04G075420 vs. ExPASy TrEMBL
Match: A0A0P0VVF4 (Os03g0244333 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0244333 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.6e-15 Identity = 57/113 (50.44%), Postives = 66/113 (58.41%), Query Frame = 0
BLAST of CaUC04G075420 vs. ExPASy TrEMBL
Match: A0A0A9LR02 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 3.6e-15 Identity = 56/102 (54.90%), Postives = 66/102 (64.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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