Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGATTGCTCCGATGAACTCTCCAAGTCTGGGTTCTAGGGTTTTTTGAGACTGTTCCTTTCCATCTTCCTAAATCTGAAAATGGCTGAATTGCCAGATGAGCTGTGGAGGCAAATTCTCGAAATTGGTGTAAAGAGCTGTGGTTTGACTTACAAAGATCTCTGTTGCGTCTCCATTTCTTCTCGTCGACTTCGCCGCCTCTCCGACGACGACTGTCCGTGGTCTCATCTTCTCTCCTCCGATTACCCTTCATCGTCTTCTTCTTTTCCATCCTCCGCCTCCTCCTCAAAGTCCCTTTACAAAATCAGGTAGAAGGAATAATTCATCAACTGCACCATATCTCTGAATCTCTCTCTTCCAATGGCGTTTGCTTGGTTAATCTGATTACGCTGGAACAAATTGGTGAGTTCGTGTTTCTTTACTTCTTCATGACGATGATCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTTAGGTTGGAGAGAGATAGAAATAGGAAGGAAGCGGCGCATAGGAGAGCAGTGCTTAGAAAGGAAAGCCAAATAGCTGAGCACTATAGAAGGCTTGGTGAATTAGAGGAACGGTTGATGGAGGAGACTAACAAATTGACAACGACCTTGACGGAATTGTCTAATTTACGCACAGTCAGGTAGTATTCGGCAATTAATTCAATATTTCAGTAATATTTTCTGTTCCTTTCCTCGTTTGATGTTTCAGGAAGATTTTCTGTGTGCTTGTGCAACTTAGTTGCTTGCAATCAGTAAAGTCGTTGATTGGAATTGTGCTTTAGAAGTATTCTAGGCAGTGGGTAAAAGGAGGAAACTATAATAACTGATTATTGTCATTGTATAAAAATTCACTAGGATCATCTTACTAGATTTTTATGTTCAACAGCATGTGGGGCTGAGGAATTCAAATCTTTTAATGTCTTGGGTCGATGGTATATTGCCTAAACTAGTTCGAACTATACTTAGGTTGGCAAGATCATCTTACTAGATGGCGTGGTACTTCAATTATCTGTTGATATCAAAGCCCAATGGATTCATTTGTCTAACGTGTGTCTAGTCTTGGTAAATTTTTGAACATTTTAACCCCTTCACGTGTAATGCTAAAATGTCAAGTCTGGTTAGGAGTCAAATTTTTTAGACCTGATAATTGTGTTTGTTCGTCTCAGGGAAGCAACAGTAGCTTTGAATGTCTGGCAGCCTGAGGTCATTAGGGCAAGGCAAAAGCAAATTGTTGAACAATGCAGTGTATCCGTTGATTCTCGGTATCGGACTCTAGATATGGAGCTCAAGCTTTGTAAGCAACAAATTGCTATTTTTCGGAAAGCACTTGTAAGTTTTGAATGTGAAAACATTAATTTTCCATCTGATATGAACTGTAATTTTAATTTCTAATACTGCTTGCAACAGAAAGATGAAAAACAGAGACTGGAATTAGCTAAAGAAGAGTTAACTTCATTGAAGTACCACCCTCTAAAGGATCATAAATTTATAGATAGCAGTAATAATGAATCTTGCATCAAGAGGAGGTCAAAGAATGTTATAAACGTAAGGTCCTTTCTTGTTGATCATACTTCAAATTTTCTGATTGCGAGTTTAAATATTTTTGTCATGTTCATGATGGTTTGGTTACCAAGAAATCTAACTGCTCCCCGTGAATTCCTGAATTCTAATGTGTGCACTGTGCTCCATTAA
mRNA sequence
GAGATTGCTCCGATGAACTCTCCAAGTCTGGGTTCTAGGGTTTTTTGAGACTGTTCCTTTCCATCTTCCTAAATCTGAAAATGGCTGAATTGCCAGATGAGCTGTGGAGGCAAATTCTCGAAATTGGTGTAAAGAGCTGTGGTTTGACTTACAAAGATCTCTGTTGCGTCTCCATTTCTTCTCGTCGACTTCGCCGCCTCTCCGACGACGACTGTCCGTGGTCTCATCTTCTCTCCTCCGATTACCCTTCATCGTCTTCTTCTTTTCCATCCTCCGCCTCCTCCTCAAAGTCCCTTTACAAAATCAGGTTGGAGAGAGATAGAAATAGGAAGGAAGCGGCGCATAGGAGAGCAGTGCTTAGAAAGGAAAGCCAAATAGCTGAGCACTATAGAAGGCTTGGTGAATTAGAGGAACGGTTGATGGAGGAGACTAACAAATTGACAACGACCTTGACGGAATTGTCTAATTTACGCACAGTCAGGGAAGCAACAGTAGCTTTGAATGTCTGGCAGCCTGAGGTCATTAGGGCAAGGCAAAAGCAAATTGTTGAACAATGCAGTGTATCCGTTGATTCTCGGTATCGGACTCTAGATATGGAGCTCAAGCTTTGTAAGCAACAAATTGCTATTTTTCGGAAAGCACTTAAAGATGAAAAACAGAGACTGGAATTAGCTAAAGAAGAGTTAACTTCATTGAAGTACCACCCTCTAAAGGATCATAAATTTATAGATAGCAGTAATAATGAATCTTGCATCAAGAGGAGGTCAAAGAATGTTATAAACGTAAGGTCCTTTCTTGTTGATCATACTTCAAATTTTCTGATTGCGAGTTTAAATATTTTTGTCATGTTCATGATGGTTTGGTTACCAAGAAATCTAACTGCTCCCCGTGAATTCCTGAATTCTAATGTGTGCACTGTGCTCCATTAA
Coding sequence (CDS)
ATGGCTGAATTGCCAGATGAGCTGTGGAGGCAAATTCTCGAAATTGGTGTAAAGAGCTGTGGTTTGACTTACAAAGATCTCTGTTGCGTCTCCATTTCTTCTCGTCGACTTCGCCGCCTCTCCGACGACGACTGTCCGTGGTCTCATCTTCTCTCCTCCGATTACCCTTCATCGTCTTCTTCTTTTCCATCCTCCGCCTCCTCCTCAAAGTCCCTTTACAAAATCAGGTTGGAGAGAGATAGAAATAGGAAGGAAGCGGCGCATAGGAGAGCAGTGCTTAGAAAGGAAAGCCAAATAGCTGAGCACTATAGAAGGCTTGGTGAATTAGAGGAACGGTTGATGGAGGAGACTAACAAATTGACAACGACCTTGACGGAATTGTCTAATTTACGCACAGTCAGGGAAGCAACAGTAGCTTTGAATGTCTGGCAGCCTGAGGTCATTAGGGCAAGGCAAAAGCAAATTGTTGAACAATGCAGTGTATCCGTTGATTCTCGGTATCGGACTCTAGATATGGAGCTCAAGCTTTGTAAGCAACAAATTGCTATTTTTCGGAAAGCACTTAAAGATGAAAAACAGAGACTGGAATTAGCTAAAGAAGAGTTAACTTCATTGAAGTACCACCCTCTAAAGGATCATAAATTTATAGATAGCAGTAATAATGAATCTTGCATCAAGAGGAGGTCAAAGAATGTTATAAACGTAAGGTCCTTTCTTGTTGATCATACTTCAAATTTTCTGATTGCGAGTTTAAATATTTTTGTCATGTTCATGATGGTTTGGTTACCAAGAAATCTAACTGCTCCCCGTGAATTCCTGAATTCTAATGTGTGCACTGTGCTCCATTAA
Protein sequence
MAELPDELWRQILEIGVKSCGLTYKDLCCVSISSRRLRRLSDDDCPWSHLLSSDYPSSSSSFPSSASSSKSLYKIRLERDRNRKEAAHRRAVLRKESQIAEHYRRLGELEERLMEETNKLTTTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRYRTLDMELKLCKQQIAIFRKALKDEKQRLELAKEELTSLKYHPLKDHKFIDSSNNESCIKRRSKNVINVRSFLVDHTSNFLIASLNIFVMFMMVWLPRNLTAPREFLNSNVCTVLH
Homology
BLAST of CaUC04G071940 vs. NCBI nr
Match:
XP_038882938.1 (F-box protein SKIP24 [Benincasa hispida] >XP_038882939.1 F-box protein SKIP24 [Benincasa hispida])
HSP 1 Score: 386.3 bits (991), Expect = 2.2e-103
Identity = 211/234 (90.17%), Postives = 217/234 (92.74%), Query Frame = 0
Query: 1 MAELPDELWRQILEIGVKSCGLTYKDLCCVSISSRRLRRLSDDDCPWSHLLSSDYPSSSS 60
M+ELP ELW QILE+GVKS LTYKDLCCVSISS RLRRLSDDDC WSHLLSSDYPSSSS
Sbjct: 1 MSELPVELWTQILEVGVKSYVLTYKDLCCVSISSPRLRRLSDDDCLWSHLLSSDYPSSSS 60
Query: 61 SFPSSASSSKSLYKIRLERDRNRKEAAHRRAVLRKESQIAEHYRRLGELEERLMEETNKL 120
SFPSSASSSKSLYKIRLERDRNRK+AAH RAVLRKESQIAEHYRRLGELE LM ETNKL
Sbjct: 61 SFPSSASSSKSLYKIRLERDRNRKKAAHMRAVLRKESQIAEHYRRLGELENWLMVETNKL 120
Query: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRYRTLDMELKLCKQQ 180
TTTLTELSNLRTVREATVALNVWQPEVIRARQ QIVEQCSVSVDSR RTLDMELK+CKQQ
Sbjct: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQTQIVEQCSVSVDSRSRTLDMELKICKQQ 180
Query: 181 IAIFRKALKDEKQRLELAKEELTSLKYHPLKDHKFIDSSNNESCIKRRSKNVIN 235
IAIF KALKDE+QRL LAKEELTSLKYHPLKDHKFIDSSNN S IKRRSK+ IN
Sbjct: 181 IAIFWKALKDERQRLNLAKEELTSLKYHPLKDHKFIDSSNNVSHIKRRSKDAIN 234
BLAST of CaUC04G071940 vs. NCBI nr
Match:
TYK09707.1 (F-box protein SKIP24 isoform X2 [Cucumis melo var. makuwa])
HSP 1 Score: 385.2 bits (988), Expect = 4.9e-103
Identity = 212/247 (85.83%), Postives = 228/247 (92.31%), Query Frame = 0
Query: 1 MAELPDELWRQILEIGVKSCGLTYKDLCCVSISSRRLRRLSDDDCPWSHLLSSDYPSSSS 60
M+ELPDELW QIL+IGVK+ LTYKDLCCVSISS RLRRLSD D WSHLLSSDYPSSSS
Sbjct: 1 MSELPDELWSQILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSS 60
Query: 61 SFPSSASSSKSLYKIRLERDRNRKEAAHRRAVLRKESQIAEHYRRLGELEERLMEETNKL 120
SFPSSASSSKSLYKIRLERDR RK+AAH RAVLRKESQIAEHYRR+G+LEERL+EET+K
Sbjct: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKC 120
Query: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRYRTLDMELKLCKQQ 180
TTTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSR RTLDMELKLCKQQ
Sbjct: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180
Query: 181 IAIFRKALKDEKQRLELAKEELTSLKYHPLKDHKFIDSSNNESCIKRRSKNVINVRSFLV 240
IAIF+KALKDEK+RLELAKEELTSLKYHPLKDHK ++SSNN+S IKRRSK+ INVR F+
Sbjct: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDSHIKRRSKDAINVR-FIS 240
Query: 241 DHTSNFL 248
+T FL
Sbjct: 241 LNTLLFL 246
BLAST of CaUC04G071940 vs. NCBI nr
Match:
XP_016901824.1 (PREDICTED: F-box protein SKIP24 isoform X2 [Cucumis melo])
HSP 1 Score: 381.7 bits (979), Expect = 5.4e-102
Identity = 206/234 (88.03%), Postives = 220/234 (94.02%), Query Frame = 0
Query: 1 MAELPDELWRQILEIGVKSCGLTYKDLCCVSISSRRLRRLSDDDCPWSHLLSSDYPSSSS 60
M+ELPDELW QIL+IGVK+ LTYKDLCCVSISS RLRRLSD D WSHLLSSDYPSSSS
Sbjct: 1 MSELPDELWSQILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSS 60
Query: 61 SFPSSASSSKSLYKIRLERDRNRKEAAHRRAVLRKESQIAEHYRRLGELEERLMEETNKL 120
SFPSSASSSKSLYKIRLERDR RK+AAH RAVLRKESQIAEHYRR+G+LEERL+EET+K
Sbjct: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKC 120
Query: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRYRTLDMELKLCKQQ 180
TTTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSR RTLDMELKLCKQQ
Sbjct: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180
Query: 181 IAIFRKALKDEKQRLELAKEELTSLKYHPLKDHKFIDSSNNESCIKRRSKNVIN 235
IAIF+KALKDEK+RLELAKEELTSLKYHPLKDHK ++SSNN+S IKRRSK+ IN
Sbjct: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDSHIKRRSKDAIN 234
BLAST of CaUC04G071940 vs. NCBI nr
Match:
KAA0043654.1 (F-box protein SKIP24 isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 379.0 bits (972), Expect = 3.5e-101
Identity = 212/252 (84.13%), Postives = 228/252 (90.48%), Query Frame = 0
Query: 1 MAELPDELWRQILEIGVKSCGLTYKDLCCVSISSRRLRRLSDDDCPWSHLLSSDYPSSSS 60
M+ELPDELW QIL+IGVK+ LTYKDLCCVSISS RLRRLSD D WSHLLSSDYPSSSS
Sbjct: 1 MSELPDELWSQILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSS 60
Query: 61 SFPSSASSSKSLYKIRLERDRNRKEAAHRRAVLRKESQIAEHYRRLGELEERLMEETNKL 120
SFPSSASSSKSLYKIRLERDR RK+AAH RAVLRKESQIAEHYRR+G+LEERL+EET+K
Sbjct: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKC 120
Query: 121 TTTLTELSNLRTV-----REATVALNVWQPEVIRARQKQIVEQCSVSVDSRYRTLDMELK 180
TTTLTELSNLRTV REATVALNVWQPEVIRARQKQIVEQCSVSVDSR RTLDMELK
Sbjct: 121 TTTLTELSNLRTVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELK 180
Query: 181 LCKQQIAIFRKALKDEKQRLELAKEELTSLKYHPLKDHKFIDSSNNESCIKRRSKNVINV 240
LCKQQIAIF+KALKDEK+RLELAKEELTSLKYHPLKDHK ++SSNN+S IKRRSK+ INV
Sbjct: 181 LCKQQIAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDSHIKRRSKDAINV 240
Query: 241 RSFLVDHTSNFL 248
R F+ +T FL
Sbjct: 241 R-FISLNTLLFL 251
BLAST of CaUC04G071940 vs. NCBI nr
Match:
XP_016901822.1 (PREDICTED: F-box protein SKIP24 isoform X1 [Cucumis melo] >XP_016901823.1 PREDICTED: F-box protein SKIP24 isoform X1 [Cucumis melo])
HSP 1 Score: 375.6 bits (963), Expect = 3.9e-100
Identity = 206/239 (86.19%), Postives = 220/239 (92.05%), Query Frame = 0
Query: 1 MAELPDELWRQILEIGVKSCGLTYKDLCCVSISSRRLRRLSDDDCPWSHLLSSDYPSSSS 60
M+ELPDELW QIL+IGVK+ LTYKDLCCVSISS RLRRLSD D WSHLLSSDYPSSSS
Sbjct: 1 MSELPDELWSQILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSS 60
Query: 61 SFPSSASSSKSLYKIRLERDRNRKEAAHRRAVLRKESQIAEHYRRLGELEERLMEETNKL 120
SFPSSASSSKSLYKIRLERDR RK+AAH RAVLRKESQIAEHYRR+G+LEERL+EET+K
Sbjct: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKC 120
Query: 121 TTTLTELSNLRTV-----REATVALNVWQPEVIRARQKQIVEQCSVSVDSRYRTLDMELK 180
TTTLTELSNLRTV REATVALNVWQPEVIRARQKQIVEQCSVSVDSR RTLDMELK
Sbjct: 121 TTTLTELSNLRTVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELK 180
Query: 181 LCKQQIAIFRKALKDEKQRLELAKEELTSLKYHPLKDHKFIDSSNNESCIKRRSKNVIN 235
LCKQQIAIF+KALKDEK+RLELAKEELTSLKYHPLKDHK ++SSNN+S IKRRSK+ IN
Sbjct: 181 LCKQQIAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDSHIKRRSKDAIN 239
BLAST of CaUC04G071940 vs. ExPASy Swiss-Prot
Match:
Q9CAZ0 (F-box protein SKIP24 OS=Arabidopsis thaliana OX=3702 GN=SKIP24 PE=1 SV=2)
HSP 1 Score: 221.9 bits (564), Expect = 9.4e-57
Identity = 129/234 (55.13%), Postives = 171/234 (73.08%), Query Frame = 0
Query: 3 ELPDELWRQILEIGVKSCGLTYKDLCCVSISSRRLRRLSDDDCPWSHLLSSDYPSS-SSS 62
E+PDELWR+ILEIGVKS +YKDLCC+SISSRRL RLS DD W LL D+P+ S+
Sbjct: 5 EIPDELWRKILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFPNHIVSA 64
Query: 63 FPSSASSSKSLYKIRLERDRNRKEAAHRRAVLRKESQIAEHYRRLGELEERLMEETNKLT 122
SS S +K +Y R ER++ RK AAHRRA+LRKES+I+E RR+ ELE RL +E +L
Sbjct: 65 SSSSESPTKFIYMTRFEREKERKLAAHRRALLRKESEISEWGRRIRELEARLSDEAERLQ 124
Query: 123 TTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRYRTLDMELKLCKQQI 182
++ + S+L VR+A+VALNVWQPEV+R RQKQ+VEQ +V V+ R R L+ME+KLCKQQI
Sbjct: 125 SSSLQFSDLLKVRQASVALNVWQPEVVRGRQKQMVEQNAVPVEGRLRALEMEMKLCKQQI 184
Query: 183 AIFRKALKDEKQRLELAKEELTSLKYHPLKDHKFIDSSNNESCIK-RRSKNVIN 235
+AL++ K R ++A +EL S+KYHPL+D+K I + + S K ++ K IN
Sbjct: 185 MGLNRALREVKHRYDIAIKELESMKYHPLRDYKSIRNGDQGSNGKTKKLKTSIN 238
BLAST of CaUC04G071940 vs. ExPASy TrEMBL
Match:
A0A5D3CCI3 (F-box protein SKIP24 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G001230 PE=4 SV=1)
HSP 1 Score: 385.2 bits (988), Expect = 2.4e-103
Identity = 212/247 (85.83%), Postives = 228/247 (92.31%), Query Frame = 0
Query: 1 MAELPDELWRQILEIGVKSCGLTYKDLCCVSISSRRLRRLSDDDCPWSHLLSSDYPSSSS 60
M+ELPDELW QIL+IGVK+ LTYKDLCCVSISS RLRRLSD D WSHLLSSDYPSSSS
Sbjct: 1 MSELPDELWSQILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSS 60
Query: 61 SFPSSASSSKSLYKIRLERDRNRKEAAHRRAVLRKESQIAEHYRRLGELEERLMEETNKL 120
SFPSSASSSKSLYKIRLERDR RK+AAH RAVLRKESQIAEHYRR+G+LEERL+EET+K
Sbjct: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKC 120
Query: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRYRTLDMELKLCKQQ 180
TTTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSR RTLDMELKLCKQQ
Sbjct: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180
Query: 181 IAIFRKALKDEKQRLELAKEELTSLKYHPLKDHKFIDSSNNESCIKRRSKNVINVRSFLV 240
IAIF+KALKDEK+RLELAKEELTSLKYHPLKDHK ++SSNN+S IKRRSK+ INVR F+
Sbjct: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDSHIKRRSKDAINVR-FIS 240
Query: 241 DHTSNFL 248
+T FL
Sbjct: 241 LNTLLFL 246
BLAST of CaUC04G071940 vs. ExPASy TrEMBL
Match:
A0A1S4E0S8 (F-box protein SKIP24 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=1)
HSP 1 Score: 381.7 bits (979), Expect = 2.6e-102
Identity = 206/234 (88.03%), Postives = 220/234 (94.02%), Query Frame = 0
Query: 1 MAELPDELWRQILEIGVKSCGLTYKDLCCVSISSRRLRRLSDDDCPWSHLLSSDYPSSSS 60
M+ELPDELW QIL+IGVK+ LTYKDLCCVSISS RLRRLSD D WSHLLSSDYPSSSS
Sbjct: 1 MSELPDELWSQILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSS 60
Query: 61 SFPSSASSSKSLYKIRLERDRNRKEAAHRRAVLRKESQIAEHYRRLGELEERLMEETNKL 120
SFPSSASSSKSLYKIRLERDR RK+AAH RAVLRKESQIAEHYRR+G+LEERL+EET+K
Sbjct: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKC 120
Query: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRYRTLDMELKLCKQQ 180
TTTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSR RTLDMELKLCKQQ
Sbjct: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180
Query: 181 IAIFRKALKDEKQRLELAKEELTSLKYHPLKDHKFIDSSNNESCIKRRSKNVIN 235
IAIF+KALKDEK+RLELAKEELTSLKYHPLKDHK ++SSNN+S IKRRSK+ IN
Sbjct: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDSHIKRRSKDAIN 234
BLAST of CaUC04G071940 vs. ExPASy TrEMBL
Match:
A0A5A7TK06 (F-box protein SKIP24 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold320G001020 PE=4 SV=1)
HSP 1 Score: 379.0 bits (972), Expect = 1.7e-101
Identity = 212/252 (84.13%), Postives = 228/252 (90.48%), Query Frame = 0
Query: 1 MAELPDELWRQILEIGVKSCGLTYKDLCCVSISSRRLRRLSDDDCPWSHLLSSDYPSSSS 60
M+ELPDELW QIL+IGVK+ LTYKDLCCVSISS RLRRLSD D WSHLLSSDYPSSSS
Sbjct: 1 MSELPDELWSQILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSS 60
Query: 61 SFPSSASSSKSLYKIRLERDRNRKEAAHRRAVLRKESQIAEHYRRLGELEERLMEETNKL 120
SFPSSASSSKSLYKIRLERDR RK+AAH RAVLRKESQIAEHYRR+G+LEERL+EET+K
Sbjct: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKC 120
Query: 121 TTTLTELSNLRTV-----REATVALNVWQPEVIRARQKQIVEQCSVSVDSRYRTLDMELK 180
TTTLTELSNLRTV REATVALNVWQPEVIRARQKQIVEQCSVSVDSR RTLDMELK
Sbjct: 121 TTTLTELSNLRTVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELK 180
Query: 181 LCKQQIAIFRKALKDEKQRLELAKEELTSLKYHPLKDHKFIDSSNNESCIKRRSKNVINV 240
LCKQQIAIF+KALKDEK+RLELAKEELTSLKYHPLKDHK ++SSNN+S IKRRSK+ INV
Sbjct: 181 LCKQQIAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDSHIKRRSKDAINV 240
Query: 241 RSFLVDHTSNFL 248
R F+ +T FL
Sbjct: 241 R-FISLNTLLFL 251
BLAST of CaUC04G071940 vs. ExPASy TrEMBL
Match:
A0A1S4E0Q4 (F-box protein SKIP24 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=1)
HSP 1 Score: 375.6 bits (963), Expect = 1.9e-100
Identity = 206/239 (86.19%), Postives = 220/239 (92.05%), Query Frame = 0
Query: 1 MAELPDELWRQILEIGVKSCGLTYKDLCCVSISSRRLRRLSDDDCPWSHLLSSDYPSSSS 60
M+ELPDELW QIL+IGVK+ LTYKDLCCVSISS RLRRLSD D WSHLLSSDYPSSSS
Sbjct: 1 MSELPDELWSQILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSS 60
Query: 61 SFPSSASSSKSLYKIRLERDRNRKEAAHRRAVLRKESQIAEHYRRLGELEERLMEETNKL 120
SFPSSASSSKSLYKIRLERDR RK+AAH RAVLRKESQIAEHYRR+G+LEERL+EET+K
Sbjct: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKC 120
Query: 121 TTTLTELSNLRTV-----REATVALNVWQPEVIRARQKQIVEQCSVSVDSRYRTLDMELK 180
TTTLTELSNLRTV REATVALNVWQPEVIRARQKQIVEQCSVSVDSR RTLDMELK
Sbjct: 121 TTTLTELSNLRTVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELK 180
Query: 181 LCKQQIAIFRKALKDEKQRLELAKEELTSLKYHPLKDHKFIDSSNNESCIKRRSKNVIN 235
LCKQQIAIF+KALKDEK+RLELAKEELTSLKYHPLKDHK ++SSNN+S IKRRSK+ IN
Sbjct: 181 LCKQQIAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDSHIKRRSKDAIN 239
BLAST of CaUC04G071940 vs. ExPASy TrEMBL
Match:
A0A1S3C1S8 (F-box protein SKIP24 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=1)
HSP 1 Score: 375.6 bits (963), Expect = 1.9e-100
Identity = 206/239 (86.19%), Postives = 220/239 (92.05%), Query Frame = 0
Query: 1 MAELPDELWRQILEIGVKSCGLTYKDLCCVSISSRRLRRLSDDDCPWSHLLSSDYPSSSS 60
M+ELPDELW QIL+IGVK+ LTYKDLCCVSISS RLRRLSD D WSHLLSSDYPSSSS
Sbjct: 1 MSELPDELWSQILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSS 60
Query: 61 SFPSSASSSKSLYKIRLERDRNRKEAAHRRAVLRKESQIAEHYRRLGELEERLMEETNKL 120
SFPSSASSSKSLYKIRLERDR RK+AAH RAVLRKESQIAEHYRR+G+LEERL+EET+K
Sbjct: 61 SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKC 120
Query: 121 TTTLTELSNLRTV-----REATVALNVWQPEVIRARQKQIVEQCSVSVDSRYRTLDMELK 180
TTTLTELSNLRTV REATVALNVWQPEVIRARQKQIVEQCSVSVDSR RTLDMELK
Sbjct: 121 TTTLTELSNLRTVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELK 180
Query: 181 LCKQQIAIFRKALKDEKQRLELAKEELTSLKYHPLKDHKFIDSSNNESCIKRRSKNVIN 235
LCKQQIAIF+KALKDEK+RLELAKEELTSLKYHPLKDHK ++SSNN+S IKRRSK+ IN
Sbjct: 181 LCKQQIAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDSHIKRRSKDAIN 239
BLAST of CaUC04G071940 vs. TAIR 10
Match:
AT1G08710.1 (F-box family protein )
HSP 1 Score: 221.9 bits (564), Expect = 6.7e-58
Identity = 129/234 (55.13%), Postives = 171/234 (73.08%), Query Frame = 0
Query: 3 ELPDELWRQILEIGVKSCGLTYKDLCCVSISSRRLRRLSDDDCPWSHLLSSDYPSS-SSS 62
E+PDELWR+ILEIGVKS +YKDLCC+SISSRRL RLS DD W LL D+P+ S+
Sbjct: 5 EIPDELWRKILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFPNHIVSA 64
Query: 63 FPSSASSSKSLYKIRLERDRNRKEAAHRRAVLRKESQIAEHYRRLGELEERLMEETNKLT 122
SS S +K +Y R ER++ RK AAHRRA+LRKES+I+E RR+ ELE RL +E +L
Sbjct: 65 SSSSESPTKFIYMTRFEREKERKLAAHRRALLRKESEISEWGRRIRELEARLSDEAERLQ 124
Query: 123 TTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRYRTLDMELKLCKQQI 182
++ + S+L VR+A+VALNVWQPEV+R RQKQ+VEQ +V V+ R R L+ME+KLCKQQI
Sbjct: 125 SSSLQFSDLLKVRQASVALNVWQPEVVRGRQKQMVEQNAVPVEGRLRALEMEMKLCKQQI 184
Query: 183 AIFRKALKDEKQRLELAKEELTSLKYHPLKDHKFIDSSNNESCIK-RRSKNVIN 235
+AL++ K R ++A +EL S+KYHPL+D+K I + + S K ++ K IN
Sbjct: 185 MGLNRALREVKHRYDIAIKELESMKYHPLRDYKSIRNGDQGSNGKTKKLKTSIN 238
BLAST of CaUC04G071940 vs. TAIR 10
Match:
AT1G08710.2 (F-box family protein )
HSP 1 Score: 221.9 bits (564), Expect = 6.7e-58
Identity = 129/234 (55.13%), Postives = 171/234 (73.08%), Query Frame = 0
Query: 3 ELPDELWRQILEIGVKSCGLTYKDLCCVSISSRRLRRLSDDDCPWSHLLSSDYPSS-SSS 62
E+PDELWR+ILEIGVKS +YKDLCC+SISSRRL RLS DD W LL D+P+ S+
Sbjct: 5 EIPDELWRKILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFPNHIVSA 64
Query: 63 FPSSASSSKSLYKIRLERDRNRKEAAHRRAVLRKESQIAEHYRRLGELEERLMEETNKLT 122
SS S +K +Y R ER++ RK AAHRRA+LRKES+I+E RR+ ELE RL +E +L
Sbjct: 65 SSSSESPTKFIYMTRFEREKERKLAAHRRALLRKESEISEWGRRIRELEARLSDEAERLQ 124
Query: 123 TTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRYRTLDMELKLCKQQI 182
++ + S+L VR+A+VALNVWQPEV+R RQKQ+VEQ +V V+ R R L+ME+KLCKQQI
Sbjct: 125 SSSLQFSDLLKVRQASVALNVWQPEVVRGRQKQMVEQNAVPVEGRLRALEMEMKLCKQQI 184
Query: 183 AIFRKALKDEKQRLELAKEELTSLKYHPLKDHKFIDSSNNESCIK-RRSKNVIN 235
+AL++ K R ++A +EL S+KYHPL+D+K I + + S K ++ K IN
Sbjct: 185 MGLNRALREVKHRYDIAIKELESMKYHPLRDYKSIRNGDQGSNGKTKKLKTSIN 238
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038882938.1 | 2.2e-103 | 90.17 | F-box protein SKIP24 [Benincasa hispida] >XP_038882939.1 F-box protein SKIP24 [B... | [more] |
TYK09707.1 | 4.9e-103 | 85.83 | F-box protein SKIP24 isoform X2 [Cucumis melo var. makuwa] | [more] |
XP_016901824.1 | 5.4e-102 | 88.03 | PREDICTED: F-box protein SKIP24 isoform X2 [Cucumis melo] | [more] |
KAA0043654.1 | 3.5e-101 | 84.13 | F-box protein SKIP24 isoform X1 [Cucumis melo var. makuwa] | [more] |
XP_016901822.1 | 3.9e-100 | 86.19 | PREDICTED: F-box protein SKIP24 isoform X1 [Cucumis melo] >XP_016901823.1 PREDIC... | [more] |
Match Name | E-value | Identity | Description | |
Q9CAZ0 | 9.4e-57 | 55.13 | F-box protein SKIP24 OS=Arabidopsis thaliana OX=3702 GN=SKIP24 PE=1 SV=2 | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3CCI3 | 2.4e-103 | 85.83 | F-box protein SKIP24 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
A0A1S4E0S8 | 2.6e-102 | 88.03 | F-box protein SKIP24 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=... | [more] |
A0A5A7TK06 | 1.7e-101 | 84.13 | F-box protein SKIP24 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... | [more] |
A0A1S4E0Q4 | 1.9e-100 | 86.19 | F-box protein SKIP24 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=... | [more] |
A0A1S3C1S8 | 1.9e-100 | 86.19 | F-box protein SKIP24 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=... | [more] |