CaUC04G067940 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTGTGTTTGGGGCTAAGGATTTGATCCTTACAGGATACTCAGACTCTGATTTTCAAACTGATAAGGATTCTAGAAAATCCACATTAGGATCAGTGTTCACTCTTAACGGCGGGGCTGTAGTTTGGCAGAGCATAAAGCAAGGTTGCATTGCTGACTCTACCATGGAGGCAGGATATGTAGCTGCTTGTGAAGCTACTAAGGAGGTCGTCTGGCTTAGGAAGTTTTTTACAGACCTGGAAATTATTCCTAACATATCAATGCCCATCACTCTTTATTGTGATAATAGTGGTGTTATGGCAAATTCCAAGGAGCCTAAAAGCCACACAAACGTGGAAAGCATATTGAGGGCAAGTATCATTTGA ATGCTTGTGTTTGGGGCTAAGGATTTGATCCTTACAGGATACTCAGACTCTGATTTTCAAACTGATAAGGATTCTAGAAAATCCACATTAGGATCAGTGTTCACTCTTAACGGCGGGGCTGTAGTTTGGCAGAGCATAAAGCAAGGTTGCATTGCTGACTCTACCATGGAGGCAGGATATGTAGCTGCTTGTGAAGCTACTAAGGAGGTCGTCTGGCTTAGGAAGTTTTTTACAGACCTGGAAATTATTCCTAACATATCAATGCCCATCACTCTTTATTGTGATAATAGTGGTGTTATGGCAAATTCCAAGGAGCCTAAAAGCCACACAAACGTGGAAAGCATATTGAGGGCAAGTATCATTTGA ATGCTTGTGTTTGGGGCTAAGGATTTGATCCTTACAGGATACTCAGACTCTGATTTTCAAACTGATAAGGATTCTAGAAAATCCACATTAGGATCAGTGTTCACTCTTAACGGCGGGGCTGTAGTTTGGCAGAGCATAAAGCAAGGTTGCATTGCTGACTCTACCATGGAGGCAGGATATGTAGCTGCTTGTGAAGCTACTAAGGAGGTCGTCTGGCTTAGGAAGTTTTTTACAGACCTGGAAATTATTCCTAACATATCAATGCCCATCACTCTTTATTGTGATAATAGTGGTGTTATGGCAAATTCCAAGGAGCCTAAAAGCCACACAAACGTGGAAAGCATATTGAGGGCAAGTATCATTTGA MLVFGAKDLILTGYSDSDFQTDKDSRKSTLGSVFTLNGGAVVWQSIKQGCIADSTMEAGYVAACEATKEVVWLRKFFTDLEIIPNISMPITLYCDNSGVMANSKEPKSHTNVESILRASII Homology
BLAST of CaUC04G067940 vs. NCBI nr
Match: KAA0042496.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 198.0 bits (502), Expect = 4.8e-47 Identity = 94/117 (80.34%), Postives = 105/117 (89.74%), Query Frame = 0
BLAST of CaUC04G067940 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 198.0 bits (502), Expect = 4.8e-47 Identity = 94/117 (80.34%), Postives = 105/117 (89.74%), Query Frame = 0
BLAST of CaUC04G067940 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 198.0 bits (502), Expect = 4.8e-47 Identity = 94/117 (80.34%), Postives = 105/117 (89.74%), Query Frame = 0
BLAST of CaUC04G067940 vs. NCBI nr
Match: KAA0043328.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 195.7 bits (496), Expect = 2.4e-46 Identity = 93/117 (79.49%), Postives = 104/117 (88.89%), Query Frame = 0
BLAST of CaUC04G067940 vs. NCBI nr
Match: TYK17670.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 195.7 bits (496), Expect = 2.4e-46 Identity = 93/117 (79.49%), Postives = 104/117 (88.89%), Query Frame = 0
BLAST of CaUC04G067940 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 7.4e-19 Identity = 48/114 (42.11%), Postives = 67/114 (58.77%), Query Frame = 0
BLAST of CaUC04G067940 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 4.4e-11 Identity = 34/63 (53.97%), Postives = 44/63 (69.84%), Query Frame = 0
BLAST of CaUC04G067940 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 65.9 bits (159), Expect = 3.7e-10 Identity = 35/106 (33.02%), Postives = 57/106 (53.77%), Query Frame = 0
BLAST of CaUC04G067940 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 2.3e-47 Identity = 94/117 (80.34%), Postives = 105/117 (89.74%), Query Frame = 0
BLAST of CaUC04G067940 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 2.3e-47 Identity = 94/117 (80.34%), Postives = 105/117 (89.74%), Query Frame = 0
BLAST of CaUC04G067940 vs. ExPASy TrEMBL
Match: A0A5A7TKM4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold246G00470 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 2.3e-47 Identity = 94/117 (80.34%), Postives = 105/117 (89.74%), Query Frame = 0
BLAST of CaUC04G067940 vs. ExPASy TrEMBL
Match: A0A5D3D214 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14220G00010 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.1e-46 Identity = 93/117 (79.49%), Postives = 104/117 (88.89%), Query Frame = 0
BLAST of CaUC04G067940 vs. ExPASy TrEMBL
Match: A0A5A7TKJ4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G002390 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.1e-46 Identity = 93/117 (79.49%), Postives = 104/117 (88.89%), Query Frame = 0
BLAST of CaUC04G067940 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 ) HSP 1 Score: 68.6 bits (166), Expect = 4.1e-12 Identity = 37/108 (34.26%), Postives = 61/108 (56.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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