CaUC03G059780 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGAGGATATATAAATAGGGCATTGCCCTTCAGGAACTTCTTCACATCGGTAGAATTACAGACCTTCTAGCTTTCTTACGTACGTCAAAACCCAACCAAAACACCTCGACTTCGAAACCATGCCGAGAGATCGTGACCCTCTAGTAGTTGGGAGAGTCATTGGCGACGTCGTCGACCCATTCTTGAGGTCCATTTCGATTAGGGTTACTTACTCCACCAAGGAAGTTAATAATGGCTGTGAGCTCAAACCCTCTCAGGTTGTAAACCAGCCAAGAGTTGAGATTGGTGGTACTGACCTTCGCACCTTCTTCACTTTGGTAAATGCTTTAATTTTTAAAAACTATTTAGGTGTCTCTCATATTAACTTATATTTATATATCCCATCAAATCTTTCAATTATAGTATGTCATGTGACAAATTATCCTTATTTTTTTCTCCAAATATTTTATTATTATTTTTATGTGAATGAGAAGAGTGAATATAGATGCACCTAATTCCGTATATCCTATTTTTTTAATATATAGTAAAAAAAATAAAAATAATTCACTTCTTTGAAAACCAATTTGCAACCTGACAGTTTTTTATTTTATTGGGTGATTGTGCGAGTTTCACAATAAATAATCTAGGACCCAAGCTTTTTTCCTTTCATTTTTACTTTCTTTTGTTTCCACTTTCCATGCTTTTTTTTTTTTTTTTTTTAATTTTTATTATTTATTAATCTTTTTGCTTTGTCCTTTTCTCATTCATTTCCATTTTGTTTGCTTTTTCTTTGTTATAGGTTATGGTGGATCCTGATGCTCCTAGCCCTAGTGATCCTAATCTTAGGGAATACTTGCATTGGTACATCCTTGTTTACTTTCTCAGTCCAAATTAATGAGTTTTCGTTTCTTGTGTTTCTTCTCTTTTTCGTTCAAATTTGTTTCAATTTTGTTCATGCATTTCATAGGCAAGAGTAGATAGGTCAACCTCAATGTAGAAAATAGGATATTCATTTTTTGTTGTCATATCAACATTTCATAGTCATATTCATTGGTCCAAAACTTGAGTATCTAAAGTTTGAAGAGTTCATAAAAATAATAATAAATAAATAAATAAATAACAGAGAATTGAGCAACTTATAGAAAATGTTGCAACAAAATATCACTAATATGGACATAATATGAATGATTAAAAATAATGATTTGATTTGTAAAGCGTAAAATAATTTTATTTTAACTTTATGATTTTTTTTTCCGTAAATTCTATTATTTGTTTGGGAATTATTAAGAAACATCAAGTAAATTTATAAAAGCTGTTAGTTTCGAAATTGTGGTCAAAATAACTTTGCGTGTTTTGGAATAAAATTTGAAGTAAAAGCAAATTTTGATAAATATTTTAGAAAAAGAAAATTCTTTTTTTGTTCTTCTTTTTGTTAGTATATGTTCTCTCCTATAATCAATCTATCTTTTCAAAATAAATGAAATGTACTTTTTTCCAAATATTATCAAGTTAGGTATGGTAAATAAAATATATACAATAACAATAACCACTATAAGAAAATAAAAGTAATTGTTTTAAATGACAAAACTTATGAAAATATTTTTTAATATAACAAAGTCACTATCTATTAGTGATAGATGATAATAGTGTTTCAATGTATTTCACGGATAGACAATGATATTTTACTATATTTGTAAATAATTGAGTTCATTTTACTATATATATTTGAAAACAATCCCAAAAATACTAAATTGGTCTAAAATATTACGTTCTCTTTTGCAATTATCTTCTTCAAATGAAAACAATCCCAAGTTTTTTTTTTCTTTTTTTTAAAGAAAAAATGCATTTACTAAAAGCATTGTTTTACCTATGAAAACTCTTTTGAAAAGGCAAGTTGAGGTTTCTCTAAGTAAGTATATTCTCTTCTTCTTTGTTAGCCTTACTTTTTCTCCTTCCTTTCTTCTTTTCAGTAAAAGGCTAACCTATCTTTTCAAAAAAAATAATAATAATAAAATAATAATAATAATAATAATACTTCTCTCTATAACCTATCATAATTTCCATGAAATATGTATATTTGTGTGTATGAATAGACCTACATTTTCACTCCTAAGTTATGGCTTCATTATGATTTTTTCTTTTACCTTAAAATGTAAATGTAAAAAAATTTGGTTAACTTTCCCAATATAATTTAACTATCCTTAGTGGAAGTTTGAATCTTCCATCTTATAATATTAATATTCTATTTGAAGAGGAAAAAAATTGACCAATAGTAGGGGGGTGTGTAGGAGGATATAAGGAAAATTTAAAAAAATAACAAAATATAGAAAAGAAGAGAGGCTTTTCACTGTTTGGAAAGACAAGGAATAAAGCTGAAACTTGTCTAATTGATAGATCAACTTCAATCCATGAATAAAAGAATTTTTTTACGGCCCTTAAAACAACAATTATTATGATGGGGATTGAAGTGGAGGACAATTGGGAATCGGCGATTATCAGCTTTTGTGTAAACAATTACTTGAAGAGATTCCTTGAACAAGTCCTACACGCTGTTTTCCAATTTTTTTTTTTTTTTTTTTTTTTCTTGCGGCTCAAAAACATGCCCACGAGGACTTGCATTTGATTTCCAATAAAGTTTGAACGTCTTCACACTAACACTTCACATGAAAAAACTGCACGGTTGGAAATACGATGATGAGTGTATAAGTAATGACAATTATTTTCGATTCTCCTATAAGATTTGAGGCATTAAAATAGAAAGGTTTTTGTCTAAAGTAAACCATATATATCACCATTGTGGTGTTATATGTGTAGTGAGGGCCGTTGTGTCTAACAAGTGGTATTAGAGTCATGTCCCTCATTTAGTTTTGTTGGTAGAATCCTCGAGTGTCGAATAAAAAAGTGGTGAGTTTCAAAAGATGATTTGTTGTTAAGTTCTATCGGAAAGGTACTGATGTGCTCCAATGACGAGGAGTTTGGCCTAGATAAGAGTTAGATAGAATATTTGAGGGGAGACTCAGTTATACATTGCCTAGGTAAAATGAAGATCATGAGTATATAACTAAGGACAACTATCTTTAATAGTATGAGACTTTTTGAATAAAAACAAAAGTAAAGTAATGAAGTTTTATACACAAAGTAGATATGAGATAATATTAAGCGTCGTTGTCTCTAAATTTCATGCGAATTTTGATTTAATATTTAATCATTTGTTTGGTTTAATTTAGTTCTTACTATCTTAAATGTTTTAATTTAGTCTTTATGATCCGGTCACATTTTACAAAATGTTATTTAAGGTTACGAACATGACATGTTTTCTATTTATGTACTAGTAATAGGTTGCTGTTTTCTACTCAGTTGAATATATAAGAAATTTAATCAATTGTTAAGTTTCTTTTAATCACAAACATCAAATCAAAATTTTAAAGGTGAAAATTGAAACTCTTAAATAGACCGGTTTTTCATTCAAGATTTATCTTGTGTACAACTTTTTTATAGTATAATTGAGTTTTATTTAATTGGTCGTTCTTTTTCCGTTCCATGAATGACATTTTCTAACGAAGGTGTGCAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATATTATTATTATTATTATTATTATTATTATTATTATTATTTTTTGCAATATGTGAACCCAGACATCAAACAAATTTTGAAGTCGATAGTATAAATTTTATATCAGCTAAACTATGTTCATATAACTGACTTACTTAATGCAAGACTTCAACACCTTTTAACCTCTCTTGATCATTTTCTCTTATACTCTTTTTCTTTTTTTCTTTTTTTTTTATTGAAAATTTTATATACAAAAGTGTATATAAAAATATTTTGGTTCATTTTGCATTTTTTTTTTTTTATTGAAAATTTTATATACAAAAGTGTATATAAAAATATTTTGGTTCATTTTGCATTTTTTTTTTTTTATTGAAAATTTTATATACAAAAGTGTATATAAAAATATTTTGGTTCATTTTGCAGGTTGGTGACTGATATTCCAGCTACAACAGGGGCAACCTTTGGTAATATGTTTTCCTTTTAATTAATGTGTAAACTAAATTCTTTGAAAAAAAAATTACCACTATTTGTTCATTTTAGAGGATTGAGAACCGTTTCTTTTAAGTTGCACAAAATTTTAACCAAGATGTGAGACTTTTCTAATGACTATAAATAATCAATAAATATGTAGTTTCTTCATCAGTTTTACACCCACACAAAATGATGGAGAAAAAAAAAAAAAAAAAATACCTTCTCTCTATTTTTTATATAATTACTTAAGTTCGTTTGATAATTATTTGGATTTTAGTTTTTGATGTTTGAAAATTAAATCTACAAACATCTATTTCTCCTCTAAATTTCTTTCATTTTTATCTACTTTTTACCTATGTGTTTAAAACCAAGCCAAATTTTGAAAACTAAAATTTACCCAAGAAAGATACAAACCATTACAAGAAAATGTAACAAAATAGACTTAATTTTTAAAAAAATTAAAGACCAAAAATAAAAAACAATATGGTTTCTATACAAAGTCTTAAATACTGTAATGTTCTGTTTGTGGAGGATCATATAAAATTCTCTTGAAAAAACAACGTATAAATTAGTTGGGTTTAGTTTAATTTGTGTGATTGTTTGATAATACATGCTTGTTATTTGAATGCGTAGGGCAAGAAATAGTGTGCTATGAGAGTCCAAGACCAACGGTGGGGATCCATCGTTTTGTGTTGGTTTTGTTTCGACAGCTTGGAAGGCAAACAGTATACGCTCCTGGTTGGCGCCAAAACTTCAATACAAGAGACTTTGCAGAGCTTTACAATCTTGGTTTGCCAGTTGCAGCTGTTTATTTCAATTGCCAAAGGGAAAGTGGTTCTGGTGGAAGGAGAAGAGTCCAAGATGATTATTGACTTCAATTAAACCCACTCCACTTTATTTTCACACATTATTATTAAATATATATCTATATATATAGTTACATAATATATCTATATATATATAATATGTGTTTATGTTTTGATTCCCATGCTTCTAGAGAAATAGTTTATGATCGATGTGGACGGGTAAATAAGGACAAATGCATTGTTGTTAATTGCCCTTGTACTATATATATATTGTAATAAGGTCATTTGATGTATTAATAATGAATAGTTTTTGTTCTTTTGGGGTTAA AAGAGGATATATAAATAGGGCATTGCCCTTCAGGAACTTCTTCACATCGGTAGAATTACAGACCTTCTAGCTTTCTTACGTACGTCAAAACCCAACCAAAACACCTCGACTTCGAAACCATGCCGAGAGATCGTGACCCTCTAGTAGTTGGGAGAGTCATTGGCGACGTCGTCGACCCATTCTTGAGGTCCATTTCGATTAGGGTTACTTACTCCACCAAGGAAGTTAATAATGGCTGTGAGCTCAAACCCTCTCAGGTTGTAAACCAGCCAAGAGTTGAGATTGGTGGTACTGACCTTCGCACCTTCTTCACTTTGGTTATGGTGGATCCTGATGCTCCTAGCCCTAGTGATCCTAATCTTAGGGAATACTTGCATTGGTTGGTGACTGATATTCCAGCTACAACAGGGGCAACCTTTGGGCAAGAAATAGTGTGCTATGAGAGTCCAAGACCAACGGTGGGGATCCATCGTTTTGTGTTGGTTTTGTTTCGACAGCTTGGAAGGCAAACAGTATACGCTCCTGGTTGGCGCCAAAACTTCAATACAAGAGACTTTGCAGAGCTTTACAATCTTGGTTTGCCAGTTGCAGCTGTTTATTTCAATTGCCAAAGGGAAAGTGGTTCTGGTGGAAGGAGAAGAGTCCAAGATGATTATTGACTTCAATTAAACCCACTCCACTTTATTTTCACACATTATTATTAAATATATATCTATATATATAGTTACATAATATATCTATATATATATAATATGTGTTTATGTTTTGATTCCCATGCTTCTAGAGAAATAGTTTATGATCGATGTGGACGGGTAAATAAGGACAAATGCATTGTTGTTAATTGCCCTTGTACTATATATATATTGTAATAAGGTCATTTGATGTATTAATAATGAATAGTTTTTGTTCTTTTGGGGTTAA ATGCCGAGAGATCGTGACCCTCTAGTAGTTGGGAGAGTCATTGGCGACGTCGTCGACCCATTCTTGAGGTCCATTTCGATTAGGGTTACTTACTCCACCAAGGAAGTTAATAATGGCTGTGAGCTCAAACCCTCTCAGGTTGTAAACCAGCCAAGAGTTGAGATTGGTGGTACTGACCTTCGCACCTTCTTCACTTTGGTTATGGTGGATCCTGATGCTCCTAGCCCTAGTGATCCTAATCTTAGGGAATACTTGCATTGGTTGGTGACTGATATTCCAGCTACAACAGGGGCAACCTTTGGGCAAGAAATAGTGTGCTATGAGAGTCCAAGACCAACGGTGGGGATCCATCGTTTTGTGTTGGTTTTGTTTCGACAGCTTGGAAGGCAAACAGTATACGCTCCTGGTTGGCGCCAAAACTTCAATACAAGAGACTTTGCAGAGCTTTACAATCTTGGTTTGCCAGTTGCAGCTGTTTATTTCAATTGCCAAAGGGAAAGTGGTTCTGGTGGAAGGAGAAGAGTCCAAGATGATTATTGA MPRDRDPLVVGRVIGDVVDPFLRSISIRVTYSTKEVNNGCELKPSQVVNQPRVEIGGTDLRTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRFVLVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRVQDDY Homology
BLAST of CaUC03G059780 vs. NCBI nr
Match: NP_001292686.1 (protein HEADING DATE 3A [Cucumis sativus] >XP_008443654.1 PREDICTED: protein HEADING DATE 3A [Cucumis melo] >BAH28253.1 FT-like protein [Cucumis sativus]) HSP 1 Score: 375.6 bits (963), Expect = 2.5e-100 Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0
BLAST of CaUC03G059780 vs. NCBI nr
Match: KGN66637.1 (hypothetical protein Csa_007129 [Cucumis sativus]) HSP 1 Score: 372.9 bits (956), Expect = 1.6e-99 Identity = 177/179 (98.88%), Postives = 177/179 (98.88%), Query Frame = 0
BLAST of CaUC03G059780 vs. NCBI nr
Match: XP_038877869.1 (LOW QUALITY PROTEIN: protein HEADING DATE 3A-like [Benincasa hispida]) HSP 1 Score: 369.8 bits (948), Expect = 1.4e-98 Identity = 175/179 (97.77%), Postives = 176/179 (98.32%), Query Frame = 0
BLAST of CaUC03G059780 vs. NCBI nr
Match: XP_022149957.1 (protein HEADING DATE 3A [Momordica charantia]) HSP 1 Score: 367.9 bits (943), Expect = 5.1e-98 Identity = 174/179 (97.21%), Postives = 176/179 (98.32%), Query Frame = 0
BLAST of CaUC03G059780 vs. NCBI nr
Match: XP_023520641.1 (protein HEADING DATE 3A [Cucurbita pepo subsp. pepo] >KAG6588265.1 Protein HEADING DATE 3A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022184.1 Protein HEADING DATE 3A, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 358.2 bits (918), Expect = 4.1e-95 Identity = 167/179 (93.30%), Postives = 173/179 (96.65%), Query Frame = 0
BLAST of CaUC03G059780 vs. ExPASy Swiss-Prot
Match: Q93WI9 (Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica OX=39947 GN=HD3A PE=1 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 6.8e-85 Identity = 140/171 (81.87%), Postives = 159/171 (92.98%), Query Frame = 0
BLAST of CaUC03G059780 vs. ExPASy Swiss-Prot
Match: Q9SXZ2 (Protein FLOWERING LOCUS T OS=Arabidopsis thaliana OX=3702 GN=FT PE=1 SV=2) HSP 1 Score: 298.1 bits (762), Expect = 6.5e-80 Identity = 133/169 (78.70%), Postives = 152/169 (89.94%), Query Frame = 0
BLAST of CaUC03G059780 vs. ExPASy Swiss-Prot
Match: Q8VWH2 (Protein RICE FLOWERING LOCUS T 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RFT1 PE=1 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 6.5e-80 Identity = 132/168 (78.57%), Postives = 152/168 (90.48%), Query Frame = 0
BLAST of CaUC03G059780 vs. ExPASy Swiss-Prot
Match: Q9S7R5 (Protein TWIN SISTER of FT OS=Arabidopsis thaliana OX=3702 GN=TSF PE=2 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 6.8e-77 Identity = 130/169 (76.92%), Postives = 147/169 (86.98%), Query Frame = 0
BLAST of CaUC03G059780 vs. ExPASy Swiss-Prot
Match: Q9XH43 (CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 3.9e-56 Identity = 109/171 (63.74%), Postives = 131/171 (76.61%), Query Frame = 0
BLAST of CaUC03G059780 vs. ExPASy TrEMBL
Match: B9ZYL0 (FT-like protein OS=Cucumis sativus OX=3659 GN=CsFT PE=2 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 1.2e-100 Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0
BLAST of CaUC03G059780 vs. ExPASy TrEMBL
Match: A0A1S3B9B8 (protein HEADING DATE 3A OS=Cucumis melo OX=3656 GN=LOC103487203 PE=3 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 1.2e-100 Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0
BLAST of CaUC03G059780 vs. ExPASy TrEMBL
Match: A0A0A0M0H5 (FT-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G651710 PE=3 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 7.7e-100 Identity = 177/179 (98.88%), Postives = 177/179 (98.88%), Query Frame = 0
BLAST of CaUC03G059780 vs. ExPASy TrEMBL
Match: A0A6J1D9F0 (protein HEADING DATE 3A OS=Momordica charantia OX=3673 GN=LOC111018250 PE=3 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 2.5e-98 Identity = 174/179 (97.21%), Postives = 176/179 (98.32%), Query Frame = 0
BLAST of CaUC03G059780 vs. ExPASy TrEMBL
Match: A6YE10 (FTL2 OS=Cucurbita moschata OX=3662 PE=2 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 2.6e-95 Identity = 166/179 (92.74%), Postives = 173/179 (96.65%), Query Frame = 0
BLAST of CaUC03G059780 vs. TAIR 10
Match: AT1G65480.1 (PEBP (phosphatidylethanolamine-binding protein) family protein ) HSP 1 Score: 298.1 bits (762), Expect = 4.7e-81 Identity = 133/169 (78.70%), Postives = 152/169 (89.94%), Query Frame = 0
BLAST of CaUC03G059780 vs. TAIR 10
Match: AT4G20370.1 (PEBP (phosphatidylethanolamine-binding protein) family protein ) HSP 1 Score: 288.1 bits (736), Expect = 4.8e-78 Identity = 130/169 (76.92%), Postives = 147/169 (86.98%), Query Frame = 0
BLAST of CaUC03G059780 vs. TAIR 10
Match: AT5G62040.1 (PEBP (phosphatidylethanolamine-binding protein) family protein ) HSP 1 Score: 216.1 bits (549), Expect = 2.3e-56 Identity = 105/176 (59.66%), Postives = 137/176 (77.84%), Query Frame = 0
BLAST of CaUC03G059780 vs. TAIR 10
Match: AT2G27550.1 (centroradialis ) HSP 1 Score: 214.9 bits (546), Expect = 5.2e-56 Identity = 105/171 (61.40%), Postives = 132/171 (77.19%), Query Frame = 0
BLAST of CaUC03G059780 vs. TAIR 10
Match: AT5G03840.1 (PEBP (phosphatidylethanolamine-binding protein) family protein ) HSP 1 Score: 213.0 bits (541), Expect = 2.0e-55 Identity = 101/169 (59.76%), Postives = 132/169 (78.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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