CaUC02G044080 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC02G044080
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionPolyubiquitin
LocationCiama_Chr02: 31863570 .. 31866406 (+)
RNA-Seq ExpressionCaUC02G044080
SyntenyCaUC02G044080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGATCTTTGTCAAAACCCTAACTGGGAAGACGATCACGCTCGAAGTCGAGAGCAGTGATACCATCGATAATGTCAAAGCCAAGATCCAGGTTTTTTATTTTCTGATTTCCTTCCGTTATATTACCTTTTCAATGAATTCATTTCTCCCCCAAGTTACTAAGGGGAGTAGGTTTCTCTCCTTGAATTTCGGTTCTTCTTTGCCTCTGCTTTATGTTTATGGCTTTTGATTTATGTTTAGTTTGATTATTTGGAGATTCCTTCGCCGTTCGGGAAGTTGTTTCTTCATGCCGTCTCGATTTCTGTTGTGCTTGTTTCCTCGTTTTATCCATGTCTTCGTTGTTGAGGATATGCTATGGAAACTCTGGTTTTTTCTATCAGTTCTCATAACATGCGTTTGCTTCGGATTTCGTGTCATTGCATGAGTCAATGGATGAAGGGTTATGAAATTGGCGTTAGTGATCTCATTTTTCTTGCTTTGTTGGGTTTAGCAGACATGTTAAGTTGGATTTTTGGAGTAAGTTTTATTTTCAAAATGATATTTAATATGTTTGCGTCTCTTAAGTTTATGCTTGTTCTTTATCGTGTGTTTGTTTATCATATTTTAGCTTCTTCCATGACTTGATTTTGTTTTCAGGTGTATTTTTATATTCTTGCCAATTCACTTTACCAAAAAAATTATTTTCCACAGAAACTGGTGTGGCAATTTGATTCCAGCGTGCCTTTTTTTAATAATCATATTTTTAATTTTGGAATGCGCATTTCTTCTAGCTTCAAACAGGGGAGATTAGTGAATTTGGTTTTATTGGTTTGTTTTTATGCAGGACAAGGAAGGTATTCCTCCTGACCAGCAGAGATTAATTTTTGCTGGTAAGCAATTGGAAGATGGTCGAACGCTTGCCGATTATAACATCCAAAAGGAATCAACCCTTCACTTGGTCTTGAGGCTTAGGGGAGGTACTATGATTAAGGTCAAGACTCTGACCGGGAAGGAAATTGAGATTGACATTGAGCCAACTGACACAATTGATCGTATCAAGGAGCGGGTTGAGGAAAAAGAGGGTATTCCCCCTGTACAGCAAAGGTATGCATTTACCTTCTTCTCCAATTACTTGAACTACAATGACTGTAACTTTCTATAGCCATTTGATATTGTGGATAACTTGTTTAATCTCCCTCAAATATGTCAATATGCGCTCTCTGTTTAAGAATAGAATTTGGTGTGGAGCTTTCCTACTTAGCACAGGGTTCGTTAATAGTTATTGGAAAGAAACAATAAAGTTGGTGGATTTTAGAATCCAACATTTTTTTCATACTTGAGTTTTATTTAAAAATGTCCTGACATTACACAAGCGAAGGACTGATCTATTGCTAATTTGAGAAGAGTTTAGTGGATTACATATCTATTTCCCTTTCCTAAGGTTGAAGGATCCATCTCTTGAGAATAGAAGGCCGGACATGTCTATTAAGTATTTTGTATGTATGTTGTATTTTGACATGTTTCAATTCGAAATTTTATACTGAATAGTGAAATGTACACAATACATTTAAAATATGATATAAAGGAAGATGTAAGATTTATAATACTCAGCTAGGTAATGTCTTTTAATGAAGGTTTATTAAAGAAACCTAAGAGCAATAAGCATATTTTCTAGTTGCTTCAAAAAATTATAGTTTTTCAATAATTGAATTTAATATTAAAATACTAGTTTATTTCAATTTTAAGTTAGCGAATTATGGTAAAAAAATCATCCTTTTCAAATTGGTTAAAGTGACAAAAGTCTATGAAATTTTATTTCAAAACCTAGTAAAATTAAAACATCAAATTATTAAAACAATAAATTAAATAAATAATTAGAAAAAATATTCTTCTAAAATTTTTAGTTTATTTTAAACATAACTATCTTACAATAATTAAGATGACAAATTTAAACTAATCTAAAATCTAACAACTGATTAATACAAGAAAATATTTCACAAACTCAAGATTTATAAATTTGCAATTCATTTCTAGGCTTCCTAAGCTTGCCTTCCAAATGCATGCTTCTTAAACCCAGACTTCCAAAACTTGCACTTCAAGCATAGTTTTCTTAAACCCAGGCTACCTAAACCTCCCAGCTTAACTCCGAGGCTTAACATTTCTAGACTTAAGATTCCAAACTTGCATGACAAACACCCTTTTTAAGGATGGGAATTCAAAATAAACATTTCATGTAAAATAGTGTTAGAAGCTGTTGATTCAGAATACTGATATAGACTGACAGAGACTTTTGTTAGTTTCACATACTTAGAAAACTAACTCCACGTTTCAACTTCAAGTATCTGAATTTATATAAATAAATGATTTCAGAAGGTCTACTACAGTAATGCTCAAGTGCCTGAAGATCGATAGTTTGATAGAGTTAGACAGCCACGTTACTTAAGTTCAAGTGTCCATGATTTCTAGGCTTTCTCTAGTTGTCTTCCCATGCTCTTTCTTCTAATATCCATTGTCTGCTATTATTTTCTGGAGTGGCATTAAATATATCCTACCCACGTAATGACAATTAGTGAGTCAACAATTCTGAATTCCATCAAAATTCTTTCTTATATTTCATGTGGTCGGTCATCTATGAACTCTTACTGGGTTAACGGTATTTGTCATTGCTTTTATGGCATTTGGACTGTATGAACATATGGTCGGTCATCGTCAGTGCTTCTTGTAACTTTCCCCACTTTTTGCAGGCTCATTTATGCCGGTAAACAGCTTGGAGATGACAAAACGGCTAAAGACTACAACATTGAGGGTGGTTCTGTTCTCCATCTAGTGCTTGCCCTGAGGGGTGGTTATCTGTAA

mRNA sequence

ATGCAGATCTTTGTCAAAACCCTAACTGGGAAGACGATCACGCTCGAAGTCGAGAGCAGTGATACCATCGATAATGTCAAAGCCAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAGCAGAGATTAATTTTTGCTGGTAAGCAATTGGAAGATGGTCGAACGCTTGCCGATTATAACATCCAAAAGGAATCAACCCTTCACTTGGTCTTGAGGCTTAGGGGAGGTACTATGATTAAGGTCAAGACTCTGACCGGGAAGGAAATTGAGATTGACATTGAGCCAACTGACACAATTGATCGTATCAAGGAGCGGGTTGAGGAAAAAGAGGGTATTCCCCCTGTACAGCAAAGGCTCATTTATGCCGGTAAACAGCTTGGAGATGACAAAACGGCTAAAGACTACAACATTGAGGGTGGTTCTGTTCTCCATCTAGTGCTTGCCCTGAGGGGTGGTTATCTGTAA

Coding sequence (CDS)

ATGCAGATCTTTGTCAAAACCCTAACTGGGAAGACGATCACGCTCGAAGTCGAGAGCAGTGATACCATCGATAATGTCAAAGCCAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAGCAGAGATTAATTTTTGCTGGTAAGCAATTGGAAGATGGTCGAACGCTTGCCGATTATAACATCCAAAAGGAATCAACCCTTCACTTGGTCTTGAGGCTTAGGGGAGGTACTATGATTAAGGTCAAGACTCTGACCGGGAAGGAAATTGAGATTGACATTGAGCCAACTGACACAATTGATCGTATCAAGGAGCGGGTTGAGGAAAAAGAGGGTATTCCCCCTGTACAGCAAAGGCTCATTTATGCCGGTAAACAGCTTGGAGATGACAAAACGGCTAAAGACTACAACATTGAGGGTGGTTCTGTTCTCCATCTAGTGCTTGCCCTGAGGGGTGGTTATCTGTAA

Protein sequence

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL
Homology
[Close]
BLAST of CaUC02G044080 vs. NCBI nr
Match: XP_004139900.1 (ubiquitin-NEDD8-like protein RUB1 [Cucumis sativus] >XP_038900398.1 ubiquitin-NEDD8-like protein RUB1 [Benincasa hispida] >KAE8646873.1 hypothetical protein Csa_020638 [Cucumis sativus])

HSP 1 Score: 300.4 bits (768), Expect = 8.7e-78
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 154

[Close]
BLAST of CaUC02G044080 vs. NCBI nr
Match: XP_022149770.1 (ubiquitin-NEDD8-like protein RUB1 [Momordica charantia])

HSP 1 Score: 299.3 bits (765), Expect = 1.9e-77
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 154

[Close]
BLAST of CaUC02G044080 vs. NCBI nr
Match: XP_008456305.1 (PREDICTED: ubiquitin-NEDD8-like protein RUB1 [Cucumis melo] >KAA0054675.1 ubiquitin-NEDD8-like protein RUB1 [Cucumis melo var. makuwa] >TYK08596.1 ubiquitin-NEDD8-like protein RUB1 [Cucumis melo var. makuwa])

HSP 1 Score: 298.5 bits (763), Expect = 3.3e-77
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG+L
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGHL 154

[Close]
BLAST of CaUC02G044080 vs. NCBI nr
Match: XP_028067984.1 (ubiquitin-NEDD8-like protein RUB2 [Camellia sinensis] >XP_028947901.1 ubiquitin-NEDD8-like protein RUB2 isoform X1 [Malus domestica] >KAB1216920.1 Ubiquitin-NEDD8-like protein RUB2 [Morella rubra] >KAB2608029.1 polyubiquitin [Pyrus ussuriensis x Pyrus communis] >RXH76481.1 hypothetical protein DVH24_019369 [Malus domestica])

HSP 1 Score: 297.0 bits (759), Expect = 9.6e-77
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG L
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGSL 154

[Close]
BLAST of CaUC02G044080 vs. NCBI nr
Match: KAA3464467.1 (ubiquitin-NEDD8-like protein RUB2 isoform X1 [Gossypium australe])

HSP 1 Score: 297.0 bits (759), Expect = 9.6e-77
Identity = 152/154 (98.70%), Postives = 153/154 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 155
           YAGKQL DDKTA+DYNIEGGSVLHLVLALRGGYL
Sbjct: 121 YAGKQLADDKTARDYNIEGGSVLHLVLALRGGYL 154

[Close]
BLAST of CaUC02G044080 vs. ExPASy Swiss-Prot
Match: P0C030 (Ubiquitin-NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica OX=39947 GN=RUB1 PE=2 SV=2)

HSP 1 Score: 296.6 bits (758), Expect = 1.6e-79
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGGY
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 153

[Close]
BLAST of CaUC02G044080 vs. ExPASy Swiss-Prot
Match: P0C073 (Ubiquitin-NEDD8-like protein RUB1 OS=Deschampsia antarctica OX=159298 GN=RUB1 PE=2 SV=2)

HSP 1 Score: 296.2 bits (757), Expect = 2.1e-79
Identity = 151/153 (98.69%), Postives = 152/153 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDR+KERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGGY
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 153

[Close]
BLAST of CaUC02G044080 vs. ExPASy Swiss-Prot
Match: Q9SHE7 (Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana OX=3702 GN=RUB1 PE=1 SV=3)

HSP 1 Score: 295.0 bits (754), Expect = 4.8e-79
Identity = 151/153 (98.69%), Postives = 152/153 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGG+
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGF 153

[Close]
BLAST of CaUC02G044080 vs. ExPASy Swiss-Prot
Match: P0C031 (Ubiquitin-NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica OX=39947 GN=RUB2 PE=2 SV=2)

HSP 1 Score: 293.9 bits (751), Expect = 1.1e-78
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 153
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGG
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 152

[Close]
BLAST of CaUC02G044080 vs. ExPASy Swiss-Prot
Match: Q8RUC6 (Ubiquitin-NEDD8-like protein RUB2 OS=Arabidopsis thaliana OX=3702 GN=RUB2 PE=1 SV=3)

HSP 1 Score: 292.0 bits (746), Expect = 4.0e-78
Identity = 151/154 (98.05%), Postives = 151/154 (98.05%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 155
           YAGKQL DDKTAKDY IEGGSVLHLVLALRGG L
Sbjct: 121 YAGKQLADDKTAKDYAIEGGSVLHLVLALRGGLL 154

[Close]
BLAST of CaUC02G044080 vs. ExPASy TrEMBL
Match: A0A6J1D6N8 (ubiquitin-NEDD8-like protein RUB1 OS=Momordica charantia OX=3673 GN=LOC111018120 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 9.3e-78
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 154

[Close]
BLAST of CaUC02G044080 vs. ExPASy TrEMBL
Match: A0A5D3CE17 (Ubiquitin-NEDD8-like protein RUB1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00180 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.6e-77
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG+L
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGHL 154

[Close]
BLAST of CaUC02G044080 vs. ExPASy TrEMBL
Match: A0A1S3C469 (ubiquitin-NEDD8-like protein RUB1 OS=Cucumis melo OX=3656 GN=LOC103496293 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.6e-77
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG+L
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGHL 154

[Close]
BLAST of CaUC02G044080 vs. ExPASy TrEMBL
Match: A0A498I4U3 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_019369 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 4.6e-77
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG L
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGSL 154

[Close]
BLAST of CaUC02G044080 vs. ExPASy TrEMBL
Match: A0A6A1W291 (Ubiquitin-NEDD8-like protein RUB2 OS=Morella rubra OX=262757 GN=CJ030_MR4G016067 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 4.6e-77
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG L
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGSL 154

[Close]
BLAST of CaUC02G044080 vs. TAIR 10
Match: AT1G31340.1 (related to ubiquitin 1 )

HSP 1 Score: 295.0 bits (754), Expect = 3.4e-80
Identity = 151/153 (98.69%), Postives = 152/153 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGG+
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGF 153

[Close]
BLAST of CaUC02G044080 vs. TAIR 10
Match: AT2G35635.1 (ubiquitin 7 )

HSP 1 Score: 292.0 bits (746), Expect = 2.9e-79
Identity = 151/154 (98.05%), Postives = 151/154 (98.05%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 155
           YAGKQL DDKTAKDY IEGGSVLHLVLALRGG L
Sbjct: 121 YAGKQLADDKTAKDYAIEGGSVLHLVLALRGGLL 154

[Close]
BLAST of CaUC02G044080 vs. TAIR 10
Match: AT4G05320.2 (polyubiquitin 10 )

HSP 1 Score: 243.4 bits (620), Expect = 1.2e-64
Identity = 123/153 (80.39%), Postives = 136/153 (88.89%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 424

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           +AGKQL D +T  DYNI+  S LHLVL LRGG+
Sbjct: 425 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 457

[Close]
BLAST of CaUC02G044080 vs. TAIR 10
Match: AT4G02890.1 (Ubiquitin family protein )

HSP 1 Score: 243.4 bits (620), Expect = 1.2e-64
Identity = 123/153 (80.39%), Postives = 136/153 (88.89%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           +AGKQL D +T  DYNI+  S LHLVL LRGG+
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 229

[Close]
BLAST of CaUC02G044080 vs. TAIR 10
Match: AT4G05050.1 (ubiquitin 11 )

HSP 1 Score: 243.4 bits (620), Expect = 1.2e-64
Identity = 123/153 (80.39%), Postives = 136/153 (88.89%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGY 154
           +AGKQL D +T  DYNI+  S LHLVL LRGG+
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 229

The following BLAST results are available for this feature:
BLAST of CaUC02G044080 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139900.18.7e-78100.00ubiquitin-NEDD8-like protein RUB1 [Cucumis sativus] >XP_038900398.1 ubiquitin-NE... [more]
XP_022149770.11.9e-7799.35ubiquitin-NEDD8-like protein RUB1 [Momordica charantia][more]
XP_008456305.13.3e-7799.35PREDICTED: ubiquitin-NEDD8-like protein RUB1 [Cucumis melo] >KAA0054675.1 ubiqui... [more]
XP_028067984.19.6e-7799.35ubiquitin-NEDD8-like protein RUB2 [Camellia sinensis] >XP_028947901.1 ubiquitin-... [more]
KAA3464467.19.6e-7798.70ubiquitin-NEDD8-like protein RUB2 isoform X1 [Gossypium australe][more]
BLAST of CaUC02G044080 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P0C0301.6e-7999.35Ubiquitin-NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica OX=39947 GN=RU... [more]
P0C0732.1e-7998.69Ubiquitin-NEDD8-like protein RUB1 OS=Deschampsia antarctica OX=159298 GN=RUB1 PE... [more]
Q9SHE74.8e-7998.69Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana OX=3702 GN=RUB1 PE=1 S... [more]
P0C0311.1e-7899.34Ubiquitin-NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica OX=39947 GN=RU... [more]
Q8RUC64.0e-7898.05Ubiquitin-NEDD8-like protein RUB2 OS=Arabidopsis thaliana OX=3702 GN=RUB2 PE=1 S... [more]
BLAST of CaUC02G044080 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D6N89.3e-7899.35ubiquitin-NEDD8-like protein RUB1 OS=Momordica charantia OX=3673 GN=LOC111018120... [more]
A0A5D3CE171.6e-7799.35Ubiquitin-NEDD8-like protein RUB1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S3C4691.6e-7799.35ubiquitin-NEDD8-like protein RUB1 OS=Cucumis melo OX=3656 GN=LOC103496293 PE=4 S... [more]
A0A498I4U34.6e-7799.35Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_019369 PE=4 SV=1[more]
A0A6A1W2914.6e-7799.35Ubiquitin-NEDD8-like protein RUB2 OS=Morella rubra OX=262757 GN=CJ030_MR4G016067... [more]
BLAST of CaUC02G044080 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G31340.13.4e-8098.69related to ubiquitin 1 [more]
AT2G35635.12.9e-7998.05ubiquitin 7 [more]
AT4G05320.21.2e-6480.39polyubiquitin 10 [more]
AT4G02890.11.2e-6480.39Ubiquitin family protein [more]
AT4G05050.11.2e-6480.39ubiquitin 11 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019956Ubiquitin domainPRINTSPR00348UBIQUITINcoord: 53..74
score: 91.18
coord: 11..31
score: 85.2
coord: 32..52
score: 95.05
IPR000626Ubiquitin-like domainSMARTSM00213ubq_7coord: 1..72
e-value: 3.0E-35
score: 133.1
coord: 77..148
e-value: 1.2E-27
score: 107.9
IPR000626Ubiquitin-like domainPFAMPF00240ubiquitincoord: 3..74
e-value: 5.8E-34
score: 115.7
coord: 79..150
e-value: 6.4E-28
score: 96.3
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 77..152
score: 26.423656
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 1..76
score: 30.452106
NoneNo IPR availableGENE3D3.10.20.90coord: 78..153
e-value: 3.6E-34
score: 118.7
coord: 1..77
e-value: 8.3E-47
score: 159.4
NoneNo IPR availablePANTHERPTHR10666:SF364SUBFAMILY NOT NAMEDcoord: 1..152
NoneNo IPR availablePANTHERPTHR10666UBIQUITINcoord: 1..152
NoneNo IPR availableCDDcd01803Ubl_ubiquitincoord: 1..76
e-value: 2.81362E-51
score: 156.065
IPR019954Ubiquitin conserved sitePROSITEPS00299UBIQUITIN_1coord: 103..128
IPR019954Ubiquitin conserved sitePROSITEPS00299UBIQUITIN_1coord: 27..52
IPR038738Nedd8-like ubiquitinCDDcd01806Ubl_NEDD8coord: 79..152
e-value: 1.32508E-47
score: 146.765
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 1..76
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 78..152

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC02G044080.1CaUC02G044080.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019941 modification-dependent protein catabolic process
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0003729 mRNA binding
molecular_function GO:0031386 protein tag
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0005515 protein binding