CaUC02G043120 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGTAGACAAATCAAGCCAGAAGGAAGGAAGAAGAAAGGAGCCATCTTTGAGACCAAAACTATGGCCTCTAGCTCTACTACTCTTGGGCTGTACTTCTGGTGTCATTCTATTTAGTTTGGTGTGGCAAAATGGCAGTAGTAGTAGTACTACTAGCGTGGTTGTGGTTGGTGGTTTGTTGGTTTCGACAGCGGTGGCAGTAGCGGTGGCGGTTATTGGTGCGGCGGCTTTGGTGACGTGGATCACAGTTATGGTGTTGTTATCCTTGGTTGGGAGGTCGAGAAGGAGGTTGGTGGCGGAGGGGAGGAAGATTAGTAAAGATATAATGGTGGGGTTTGTGGTGAAGGTTTTGTTGAAGGAAGCCAATGTTTTGGGTGCTATTTCGGCTGCTTTTTTGGGCTACTTGGCCTTTGCTTGGGGTCCATTATTGTTCCTTCCTATTCCAAATTATTTTGGTTGA ATGGCAGTAGACAAATCAAGCCAGAAGGAAGGAAGAAGAAAGGAGCCATCTTTGAGACCAAAACTATGGCCTCTAGCTCTACTACTCTTGGGCTGTACTTCTGGTGTCATTCTATTTAGTTTGGTGTGGCAAAATGGCAGTAGTAGTAGTACTACTAGCGTGGTTGTGGTTGGTGGTTTGTTGGTTTCGACAGCGGTGGCAGTAGCGGTGGCGGTTATTGGTGCGGCGGCTTTGGTGACGTGGATCACAGTTATGGTGTTGTTATCCTTGGTTGGGAGGTCGAGAAGGAGGTTGGTGGCGGAGGGGAGGAAGATTAGTAAAGATATAATGGTGGGGTTTGTGGTGAAGGTTTTGTTGAAGGAAGCCAATGTTTTGGGTGCTATTTCGGCTGCTTTTTTGGGCTACTTGGCCTTTGCTTGGGGTCCATTATTGTTCCTTCCTATTCCAAATTATTTTGGTTGA ATGGCAGTAGACAAATCAAGCCAGAAGGAAGGAAGAAGAAAGGAGCCATCTTTGAGACCAAAACTATGGCCTCTAGCTCTACTACTCTTGGGCTGTACTTCTGGTGTCATTCTATTTAGTTTGGTGTGGCAAAATGGCAGTAGTAGTAGTACTACTAGCGTGGTTGTGGTTGGTGGTTTGTTGGTTTCGACAGCGGTGGCAGTAGCGGTGGCGGTTATTGGTGCGGCGGCTTTGGTGACGTGGATCACAGTTATGGTGTTGTTATCCTTGGTTGGGAGGTCGAGAAGGAGGTTGGTGGCGGAGGGGAGGAAGATTAGTAAAGATATAATGGTGGGGTTTGTGGTGAAGGTTTTGTTGAAGGAAGCCAATGTTTTGGGTGCTATTTCGGCTGCTTTTTTGGGCTACTTGGCCTTTGCTTGGGGTCCATTATTGTTCCTTCCTATTCCAAATTATTTTGGTTGA MAVDKSSQKEGRRKEPSLRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYFG Homology
BLAST of CaUC02G043120 vs. NCBI nr
Match: XP_038902352.1 (uncharacterized protein LOC120088986 [Benincasa hispida]) HSP 1 Score: 198.4 bits (503), Expect = 4.6e-47 Identity = 114/139 (82.01%), Postives = 124/139 (89.21%), Query Frame = 0
BLAST of CaUC02G043120 vs. NCBI nr
Match: KAE8646853.1 (hypothetical protein Csa_020628 [Cucumis sativus]) HSP 1 Score: 154.8 bits (390), Expect = 5.8e-34 Identity = 99/143 (69.23%), Postives = 110/143 (76.92%), Query Frame = 0
BLAST of CaUC02G043120 vs. NCBI nr
Match: XP_022970724.1 (uncharacterized protein LOC111469624 [Cucurbita maxima]) HSP 1 Score: 124.0 bits (310), Expect = 1.1e-24 Identity = 85/146 (58.22%), Postives = 99/146 (67.81%), Query Frame = 0
BLAST of CaUC02G043120 vs. NCBI nr
Match: XP_023534045.1 (uncharacterized protein LOC111795714 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 118.2 bits (295), Expect = 6.1e-23 Identity = 82/143 (57.34%), Postives = 96/143 (67.13%), Query Frame = 0
BLAST of CaUC02G043120 vs. NCBI nr
Match: XP_022947668.1 (uncharacterized protein LOC111451463 [Cucurbita moschata]) HSP 1 Score: 116.3 bits (290), Expect = 2.3e-22 Identity = 82/143 (57.34%), Postives = 95/143 (66.43%), Query Frame = 0
BLAST of CaUC02G043120 vs. ExPASy TrEMBL
Match: A0A0A0KE95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G127980 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 2.8e-34 Identity = 99/143 (69.23%), Postives = 110/143 (76.92%), Query Frame = 0
BLAST of CaUC02G043120 vs. ExPASy TrEMBL
Match: A0A6J1I6G7 (uncharacterized protein LOC111469624 OS=Cucurbita maxima OX=3661 GN=LOC111469624 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 5.3e-25 Identity = 85/146 (58.22%), Postives = 99/146 (67.81%), Query Frame = 0
BLAST of CaUC02G043120 vs. ExPASy TrEMBL
Match: A0A6J1G791 (uncharacterized protein LOC111451463 OS=Cucurbita moschata OX=3662 GN=LOC111451463 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 1.1e-22 Identity = 82/143 (57.34%), Postives = 95/143 (66.43%), Query Frame = 0
BLAST of CaUC02G043120 vs. ExPASy TrEMBL
Match: A0A7J7CEJ2 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW17G00088 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 2.0e-08 Identity = 53/119 (44.54%), Postives = 77/119 (64.71%), Query Frame = 0
BLAST of CaUC02G043120 vs. ExPASy TrEMBL
Match: A0A7J7DCH0 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW08G00668 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 2.7e-08 Identity = 53/119 (44.54%), Postives = 79/119 (66.39%), Query Frame = 0
BLAST of CaUC02G043120 vs. TAIR 10
Match: AT4G03600.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 58.9 bits (141), Expect = 4.1e-09 Identity = 39/82 (47.56%), Postives = 56/82 (68.29%), Query Frame = 0
BLAST of CaUC02G043120 vs. TAIR 10
Match: AT1G03730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G03600.1); Has 50 Blast hits to 50 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 56.6 bits (135), Expect = 2.0e-08 Identity = 39/81 (48.15%), Postives = 55/81 (67.90%), Query Frame = 0
BLAST of CaUC02G043120 vs. TAIR 10
Match: AT4G28330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28340.1); Has 48 Blast hits to 48 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 51.2 bits (121), Expect = 8.5e-07 Identity = 35/84 (41.67%), Postives = 56/84 (66.67%), Query Frame = 0
BLAST of CaUC02G043120 vs. TAIR 10
Match: AT4G28340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28330.1); Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.7 bits (104), Expect = 7.9e-05 Identity = 32/84 (38.10%), Postives = 55/84 (65.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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