CaUC02G043120 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC02G043120
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionMannan endo-1,4-beta-mannosidase
LocationCiama_Chr02: 30629082 .. 30629543 (-)
RNA-Seq ExpressionCaUC02G043120
SyntenyCaUC02G043120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGTAGACAAATCAAGCCAGAAGGAAGGAAGAAGAAAGGAGCCATCTTTGAGACCAAAACTATGGCCTCTAGCTCTACTACTCTTGGGCTGTACTTCTGGTGTCATTCTATTTAGTTTGGTGTGGCAAAATGGCAGTAGTAGTAGTACTACTAGCGTGGTTGTGGTTGGTGGTTTGTTGGTTTCGACAGCGGTGGCAGTAGCGGTGGCGGTTATTGGTGCGGCGGCTTTGGTGACGTGGATCACAGTTATGGTGTTGTTATCCTTGGTTGGGAGGTCGAGAAGGAGGTTGGTGGCGGAGGGGAGGAAGATTAGTAAAGATATAATGGTGGGGTTTGTGGTGAAGGTTTTGTTGAAGGAAGCCAATGTTTTGGGTGCTATTTCGGCTGCTTTTTTGGGCTACTTGGCCTTTGCTTGGGGTCCATTATTGTTCCTTCCTATTCCAAATTATTTTGGTTGA

mRNA sequence

ATGGCAGTAGACAAATCAAGCCAGAAGGAAGGAAGAAGAAAGGAGCCATCTTTGAGACCAAAACTATGGCCTCTAGCTCTACTACTCTTGGGCTGTACTTCTGGTGTCATTCTATTTAGTTTGGTGTGGCAAAATGGCAGTAGTAGTAGTACTACTAGCGTGGTTGTGGTTGGTGGTTTGTTGGTTTCGACAGCGGTGGCAGTAGCGGTGGCGGTTATTGGTGCGGCGGCTTTGGTGACGTGGATCACAGTTATGGTGTTGTTATCCTTGGTTGGGAGGTCGAGAAGGAGGTTGGTGGCGGAGGGGAGGAAGATTAGTAAAGATATAATGGTGGGGTTTGTGGTGAAGGTTTTGTTGAAGGAAGCCAATGTTTTGGGTGCTATTTCGGCTGCTTTTTTGGGCTACTTGGCCTTTGCTTGGGGTCCATTATTGTTCCTTCCTATTCCAAATTATTTTGGTTGA

Coding sequence (CDS)

ATGGCAGTAGACAAATCAAGCCAGAAGGAAGGAAGAAGAAAGGAGCCATCTTTGAGACCAAAACTATGGCCTCTAGCTCTACTACTCTTGGGCTGTACTTCTGGTGTCATTCTATTTAGTTTGGTGTGGCAAAATGGCAGTAGTAGTAGTACTACTAGCGTGGTTGTGGTTGGTGGTTTGTTGGTTTCGACAGCGGTGGCAGTAGCGGTGGCGGTTATTGGTGCGGCGGCTTTGGTGACGTGGATCACAGTTATGGTGTTGTTATCCTTGGTTGGGAGGTCGAGAAGGAGGTTGGTGGCGGAGGGGAGGAAGATTAGTAAAGATATAATGGTGGGGTTTGTGGTGAAGGTTTTGTTGAAGGAAGCCAATGTTTTGGGTGCTATTTCGGCTGCTTTTTTGGGCTACTTGGCCTTTGCTTGGGGTCCATTATTGTTCCTTCCTATTCCAAATTATTTTGGTTGA

Protein sequence

MAVDKSSQKEGRRKEPSLRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYFG
Homology
BLAST of CaUC02G043120 vs. NCBI nr
Match: XP_038902352.1 (uncharacterized protein LOC120088986 [Benincasa hispida])

HSP 1 Score: 198.4 bits (503), Expect = 4.6e-47
Identity = 114/139 (82.01%), Postives = 124/139 (89.21%), Query Frame = 0

Query: 15  EPSLRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIG 74
           EPSLRPKLWPLALLLLG TSG ILF LV QNG SS+TT+VV++GGLL+S AVAVAV    
Sbjct: 3   EPSLRPKLWPLALLLLGSTSGAILFGLVHQNG-SSTTTTVVMIGGLLLS-AVAVAVVAAA 62

Query: 75  AAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVLLKEANVLGAISAAFLG 134
           A ALVTWITVMVLLSL+GR+RRRLVAEG+KISK+IMVGFVVKVLLKE NV+GAISAA LG
Sbjct: 63  AMALVTWITVMVLLSLIGRTRRRLVAEGKKISKEIMVGFVVKVLLKEGNVMGAISAAVLG 122

Query: 135 YLAFAWGPLLFLPIPNYFG 154
           YLAFAWGPLLF P PNYFG
Sbjct: 123 YLAFAWGPLLFFPTPNYFG 139

BLAST of CaUC02G043120 vs. NCBI nr
Match: KAE8646853.1 (hypothetical protein Csa_020628 [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 5.8e-34
Identity = 99/143 (69.23%), Postives = 110/143 (76.92%), Query Frame = 0

Query: 5   KSSQKEGRRKEPS-LRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVS 64
           K+SQKE R KEPS   PK WPL LLLLGCT G ILF  V QN    S+ SVVVVGGL+V 
Sbjct: 65  KTSQKEERTKEPSWSSPKQWPLVLLLLGCTFGSILFGSVHQN----SSASVVVVGGLMVL 124

Query: 65  TA--VAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVLLKE 124
            A  VAVAVAVIG A LVTWITV+V L L+GRSRRRLVAEGRKISK++MVGF+V+VLLKE
Sbjct: 125 AAVGVAVAVAVIGVAGLVTWITVVVFLWLIGRSRRRLVAEGRKISKEVMVGFMVRVLLKE 184

Query: 125 ANVLGAISAAFLGYLAFAWGPLL 145
            NVLGAISAA  GYL    G ++
Sbjct: 185 GNVLGAISAAVFGYLGLCMGSII 203

BLAST of CaUC02G043120 vs. NCBI nr
Match: XP_022970724.1 (uncharacterized protein LOC111469624 [Cucurbita maxima])

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-24
Identity = 85/146 (58.22%), Postives = 99/146 (67.81%), Query Frame = 0

Query: 7   SQKEGRRKEPSLRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAV 66
           +Q EG RK P  RP+LW  A   LGC  GV+ F LV          S+VVVGGLLV  A+
Sbjct: 41  TQMEGARKAPFFRPQLWAAA---LGC--GVVAFCLV----QLGHYCSLVVVGGLLVCLAM 100

Query: 67  AVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVLLKEANVLG 126
           A       AAA+VTWITV+VLL L+GRSRRR+VAEGRKISK+IMVG VVKVLLKE  VLG
Sbjct: 101 A------AAAAVVTWITVVVLLVLIGRSRRRVVAEGRKISKEIMVGLVVKVLLKEGKVLG 160

Query: 127 AISAAFLGYLAFAWGPLLFLPIPNYF 153
            +  A LG LA AWGP   LP+ +Y+
Sbjct: 161 GLCGAALGCLAVAWGP--SLPVAHYY 169

BLAST of CaUC02G043120 vs. NCBI nr
Match: XP_023534045.1 (uncharacterized protein LOC111795714 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 118.2 bits (295), Expect = 6.1e-23
Identity = 82/143 (57.34%), Postives = 96/143 (67.13%), Query Frame = 0

Query: 10  EGRRKEPSLRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVA 69
           EG RK P   P+LW  A   LGC  GV+ F LV          ++VVVGGLLVS A+A  
Sbjct: 2   EGARKAPFFPPQLWAAA---LGC--GVVAFCLV----QLGHYCTLVVVGGLLVSLAMA-- 61

Query: 70  VAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVLLKEANVLGAIS 129
                AAA+VTWITV+V L L+GRSR+R+VAEGRKISK+IMVG VVKVLLKE  VLG + 
Sbjct: 62  ----AAAAVVTWITVVVFLVLIGRSRQRVVAEGRKISKEIMVGLVVKVLLKEGKVLGGLC 121

Query: 130 AAFLGYLAFAWGPLLFLPIPNYF 153
            A LG LA AWGP   LPI +Y+
Sbjct: 122 GAVLGCLAVAWGP--SLPIAHYY 127

BLAST of CaUC02G043120 vs. NCBI nr
Match: XP_022947668.1 (uncharacterized protein LOC111451463 [Cucurbita moschata])

HSP 1 Score: 116.3 bits (290), Expect = 2.3e-22
Identity = 82/143 (57.34%), Postives = 95/143 (66.43%), Query Frame = 0

Query: 10  EGRRKEPSLRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVA 69
           EG RK P  RP+LW  A   LGC  GV+ F LV          ++VVVGGLLV  A+A  
Sbjct: 2   EGVRKAPFFRPQLWAAA---LGC--GVVAFCLV----QLGHYCTLVVVGGLLVCLAMA-- 61

Query: 70  VAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVLLKEANVLGAIS 129
                AAA+VTWITV+V L L+GRSRRR+VAEGRKISK+IMVG VVKVLLKE  VLG + 
Sbjct: 62  ----AAAAVVTWITVVVFLVLIGRSRRRVVAEGRKISKEIMVGLVVKVLLKEGKVLGGLC 121

Query: 130 AAFLGYLAFAWGPLLFLPIPNYF 153
            A L  LA AWGP   LPI +Y+
Sbjct: 122 GAVLCCLAVAWGP--SLPIAHYY 127

BLAST of CaUC02G043120 vs. ExPASy TrEMBL
Match: A0A0A0KE95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G127980 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.8e-34
Identity = 99/143 (69.23%), Postives = 110/143 (76.92%), Query Frame = 0

Query: 5   KSSQKEGRRKEPS-LRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVS 64
           K+SQKE R KEPS   PK WPL LLLLGCT G ILF  V QN    S+ SVVVVGGL+V 
Sbjct: 36  KTSQKEERTKEPSWSSPKQWPLVLLLLGCTFGSILFGSVHQN----SSASVVVVGGLMVL 95

Query: 65  TA--VAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVLLKE 124
            A  VAVAVAVIG A LVTWITV+V L L+GRSRRRLVAEGRKISK++MVGF+V+VLLKE
Sbjct: 96  AAVGVAVAVAVIGVAGLVTWITVVVFLWLIGRSRRRLVAEGRKISKEVMVGFMVRVLLKE 155

Query: 125 ANVLGAISAAFLGYLAFAWGPLL 145
            NVLGAISAA  GYL    G ++
Sbjct: 156 GNVLGAISAAVFGYLGLCMGSII 174

BLAST of CaUC02G043120 vs. ExPASy TrEMBL
Match: A0A6J1I6G7 (uncharacterized protein LOC111469624 OS=Cucurbita maxima OX=3661 GN=LOC111469624 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 5.3e-25
Identity = 85/146 (58.22%), Postives = 99/146 (67.81%), Query Frame = 0

Query: 7   SQKEGRRKEPSLRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAV 66
           +Q EG RK P  RP+LW  A   LGC  GV+ F LV          S+VVVGGLLV  A+
Sbjct: 41  TQMEGARKAPFFRPQLWAAA---LGC--GVVAFCLV----QLGHYCSLVVVGGLLVCLAM 100

Query: 67  AVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVLLKEANVLG 126
           A       AAA+VTWITV+VLL L+GRSRRR+VAEGRKISK+IMVG VVKVLLKE  VLG
Sbjct: 101 A------AAAAVVTWITVVVLLVLIGRSRRRVVAEGRKISKEIMVGLVVKVLLKEGKVLG 160

Query: 127 AISAAFLGYLAFAWGPLLFLPIPNYF 153
            +  A LG LA AWGP   LP+ +Y+
Sbjct: 161 GLCGAALGCLAVAWGP--SLPVAHYY 169

BLAST of CaUC02G043120 vs. ExPASy TrEMBL
Match: A0A6J1G791 (uncharacterized protein LOC111451463 OS=Cucurbita moschata OX=3662 GN=LOC111451463 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-22
Identity = 82/143 (57.34%), Postives = 95/143 (66.43%), Query Frame = 0

Query: 10  EGRRKEPSLRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVA 69
           EG RK P  RP+LW  A   LGC  GV+ F LV          ++VVVGGLLV  A+A  
Sbjct: 2   EGVRKAPFFRPQLWAAA---LGC--GVVAFCLV----QLGHYCTLVVVGGLLVCLAMA-- 61

Query: 70  VAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVLLKEANVLGAIS 129
                AAA+VTWITV+V L L+GRSRRR+VAEGRKISK+IMVG VVKVLLKE  VLG + 
Sbjct: 62  ----AAAAVVTWITVVVFLVLIGRSRRRVVAEGRKISKEIMVGLVVKVLLKEGKVLGGLC 121

Query: 130 AAFLGYLAFAWGPLLFLPIPNYF 153
            A L  LA AWGP   LPI +Y+
Sbjct: 122 GAVLCCLAVAWGP--SLPIAHYY 127

BLAST of CaUC02G043120 vs. ExPASy TrEMBL
Match: A0A7J7CEJ2 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW17G00088 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.0e-08
Identity = 53/119 (44.54%), Postives = 77/119 (64.71%), Query Frame = 0

Query: 28  LLLGCTSGVILFSLVW---QNGSSSSTT------SVVVVGGLLVSTAVAVAVAVIGAAAL 87
           ++L C+   I F L W   Q+  SSS++      + V++GG+    ++  A+AV   A L
Sbjct: 44  IILSCSWNFIKFILSWYKLQSQPSSSSSGWPALYASVLLGGVFGLLSMVAALAVAVPATL 103

Query: 88  VTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVLLKEANVLGAISAAFLGYLA 138
           V WITV+VLL+  G+ RR LV EGRKI+++I VGFV+K+LLKE N++ A+  A LGY A
Sbjct: 104 VIWITVVVLLAFFGKPRRVLVVEGRKITREI-VGFVLKILLKEGNIVAAV-CAILGYFA 160

BLAST of CaUC02G043120 vs. ExPASy TrEMBL
Match: A0A7J7DCH0 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW08G00668 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.7e-08
Identity = 53/119 (44.54%), Postives = 79/119 (66.39%), Query Frame = 0

Query: 28  LLLGCTSGVILFSLVW---QNGSSSSTT------SVVVVGGLLVSTAVAVAVAVIGAAAL 87
           ++L C+   + F L W   Q+ +SSS++      + V++GG+    ++  A+AV   A L
Sbjct: 44  IILSCSWNFLKFILSWYKLQSQTSSSSSGWHALYASVLLGGVFGLLSMIAALAVAVPATL 103

Query: 88  VTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVLLKEANVLGAISAAFLGYLA 138
           V WITV+VLL+ +G+ R  LV EGRKI+K+I VGFV+K+LLKE NV+ A+  A LGY+A
Sbjct: 104 VIWITVLVLLAFLGKPRWVLVIEGRKITKEI-VGFVLKILLKEGNVVAAV-CAILGYIA 160

BLAST of CaUC02G043120 vs. TAIR 10
Match: AT4G03600.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 4.1e-09
Identity = 39/82 (47.56%), Postives = 56/82 (68.29%), Query Frame = 0

Query: 55  VVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFV 114
           VV+G +  + ++  A+ V   A +V WI+V+VLL+  G+SRR LV EGRKI++++ VGFV
Sbjct: 73  VVLGAMFGAMSMVAAMTVAVPAVMVIWISVVVLLAFFGKSRRVLVVEGRKITREV-VGFV 132

Query: 115 VKVLLKEANVLGAISAAFLGYL 137
            KVLLKE NV+ A  A    +L
Sbjct: 133 FKVLLKEGNVVAAFCAVLAYFL 153

BLAST of CaUC02G043120 vs. TAIR 10
Match: AT1G03730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G03600.1); Has 50 Blast hits to 50 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 56.6 bits (135), Expect = 2.0e-08
Identity = 39/81 (48.15%), Postives = 55/81 (67.90%), Query Frame = 0

Query: 55  VVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFV 114
           VV+G +  + ++  A AV   A +V WI+V+VLL+  G+SRR LV E RKI++++  GFV
Sbjct: 78  VVLGAVFGAMSMVAAAAVAVPAVMVIWISVVVLLAFFGKSRRVLVVEARKITREVF-GFV 137

Query: 115 VKVLLKEANVLGAISAAFLGY 136
            KVLLKE N + A+  A LGY
Sbjct: 138 FKVLLKEGNAVAAV-CAVLGY 156

BLAST of CaUC02G043120 vs. TAIR 10
Match: AT4G28330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28340.1); Has 48 Blast hits to 48 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 8.5e-07
Identity = 35/84 (41.67%), Postives = 56/84 (66.67%), Query Frame = 0

Query: 55  VVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFV 114
           V++G +    ++A A+ +   A +V WI+V+V ++  G+SR+R+V EGRK++K+I  GFV
Sbjct: 69  VLLGAVFGVLSMAAALFIAVPAIVVIWISVVVTMAFAGKSRKRVVIEGRKVTKEI-AGFV 128

Query: 115 VKVLLKEANVLGAISAAFLGYLAF 139
            +VLLKE N + A+  A L Y  F
Sbjct: 129 FRVLLKEGNFV-ALLCALLAYFVF 150

BLAST of CaUC02G043120 vs. TAIR 10
Match: AT4G28340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28330.1); Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 7.9e-05
Identity = 32/84 (38.10%), Postives = 55/84 (65.48%), Query Frame = 0

Query: 55  VVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFV 114
           V++G +    ++A A+ +   A +V WI+V+V ++   +SR+++V EGRK++K+I  G+V
Sbjct: 69  VLLGAVFGVLSMAAALFIAVPAIVVIWISVVVTIAFPVKSRKKVVIEGRKVTKEI-AGYV 128

Query: 115 VKVLLKEANVLGAISAAFLGYLAF 139
            KVLLKE N + A+  A + Y  F
Sbjct: 129 FKVLLKEGNFV-ALLCAVIAYFVF 150

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038902352.14.6e-4782.01uncharacterized protein LOC120088986 [Benincasa hispida][more]
KAE8646853.15.8e-3469.23hypothetical protein Csa_020628 [Cucumis sativus][more]
XP_022970724.11.1e-2458.22uncharacterized protein LOC111469624 [Cucurbita maxima][more]
XP_023534045.16.1e-2357.34uncharacterized protein LOC111795714 [Cucurbita pepo subsp. pepo][more]
XP_022947668.12.3e-2257.34uncharacterized protein LOC111451463 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KE952.8e-3469.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G127980 PE=4 SV=1[more]
A0A6J1I6G75.3e-2558.22uncharacterized protein LOC111469624 OS=Cucurbita maxima OX=3661 GN=LOC111469624... [more]
A0A6J1G7911.1e-2257.34uncharacterized protein LOC111451463 OS=Cucurbita moschata OX=3662 GN=LOC1114514... [more]
A0A7J7CEJ22.0e-0844.54Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW17G00088 ... [more]
A0A7J7DCH02.7e-0844.54Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW08G00668 ... [more]
Match NameE-valueIdentityDescription
AT4G03600.14.1e-0947.56unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G03730.12.0e-0848.15unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G28330.18.5e-0741.67unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G28340.17.9e-0538.10unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34656:SF1PYRROLINE-5-CARBOXYLATE REDUCTASEcoord: 52..139
NoneNo IPR availablePANTHERPTHR34656PYRROLINE-5-CARBOXYLATE REDUCTASEcoord: 52..139
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..32
score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC02G043120.1CaUC02G043120.1mRNA