CaUC02G033410 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC02G033410
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionCytochrome c biogenesis B
LocationCiama_Chr02: 9569771 .. 9571507 (-)
RNA-Seq ExpressionCaUC02G033410
SyntenyCaUC02G033410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACGGTAACCCTCTCCTACGCTACTGGTGGACTGTTGCACAGAAAGGCCGACAGAAGCAACGTTTCTTAGCGCGCTTTTCAAGTGCTTAGCTTCTGCTAGCGGCGGGCGGCAAGGCCATAAAGTCAGTTCAGTTGGAAGCCTAAGCCAAGAAGGTACGAACGAAGTGACGGGCCCTTTTAGAGTTTTAGAGATAGGGTAGGGGGGCGGCTTGATTGTGATAGTAATTTCGAACATCTCTCCCTTTTCTCTTAGCGTGCACAGTTTGCTTGCATGCCGCTTTAGGCACATCTCTCTTTCTTAGTTTCACGCTGGCCTAAGTCAGTCTTTTAGTAAGCGTATAGTTGCAGCTATTTAGTGTATAAGCAATTCTTTAGTGGACGCACCGAAAGGGCGGGATAAGACAAGGCGGTGGAGGTTGGTTGAAGATGATGTTACGCGGCGTTCAGAACCAGCCTTGAAGTGAATGAATTTGAAAGAACGAAGAAGTAAGGAAATGAGACGACTCTTTCTTTCACTATATCATAAACGGATCTTCCCCTCCACACCAATCACGAGTTTTTCTCCATTCCTCTCGTATATCGTCGTAACGCCCTTAATGCTAGGTTTTGAAAAAGACTTTTCATGTCATTCCCATTTAGGTCCGATTCGGATCCCTCCGTTGTTTCCTTTTCCTCCCGCACCTTTTCCTCGAAATGAGAAAGAAGATGGTACACTCGAATTGTATTATTTAAGTGCTTATTGCTTGCCAAAGATCCTACTTCTACAATTGGTAGGTCACCGGGTTATTCAAATAAGTTGTGTTTTCTGTGGTTTTCCCATGTTAAAACTTCCGTACCAATTCGGTCGATCCGGAATGGATCGGTTAAACATTCTATTAGGGAGCCTGGTCTTGACTCTTCTGTGTGGTATTCATTCTCGTTCGGCTCTTGGAATCACATCCAGCCGTGGTTGGAACAGCTCGCAAAATCCAACCACTTCACCTACTTCATTGCCCCCAACCGTTTCTCGTACCTCTATTGAAACAGAATGGTTTCATGTTCCTTCATCGATTGGTTATTCCTCCCCGTTCGTATCTCTTTTTCCAATTTCGGTCTCGATTAGTTTACAAGATTGAATGGCTAATTTTCCTCCGGACCCTCGATTCGATTGTTTTCCAAGAATGTTGAGCCGGGTATGTAAGCCGTGTATCTGGGAGGAAGTTAAAAGAAGGGCTTTTTCCGCAGCTATTGAAATGAAATAATAATCTCTTTTTTGTCCCACCGAATAAAGATTGAATATATGTCCAATCTCTAGTGGTGGTGAAACCAACCAAGATGTATGTCGTCCGACCCGACCTCAGACTCTTTCTTCCCGACCTATTTGACCCTCTGGCCGCTGTTATTTAGGTGGTATCCCGAGATCGAATTCCTCCCGGGAACACACGAAAGAAAGATATGAACTGGGTAAATAGAAATGGAAAAGAGATGTTTCCAATTCATTCAAATCCGAAGCTTTTTCTACATCCATATGATCTACTAAAGTCGATCGGTATTGCCCATATAATGAAAGCAGATCTTGGTCCATAGAGTCCCAAGAAGGTAAGAACTCCAACCTGTCCGATGCTTCTTCGGCCAAATACAATATACAAGTGGGACCTGCACTATGAGCAAGCTGTGCGAAAAACCGCTTCTTTTTTCCGGTTTCGCAACAACTTGGGCGAAATGGGGTTCTACCGGGAAACCATGGATTTTTGA

mRNA sequence

ATGTACGAAAGGCCGACAGAAGCAACGTTTCTTAGCGCGCTTTTCAAGTGCTTAGCTTCTGCTAGCGGCGGGCGGCAAGGCCATAAAGTCAGTTCAGTTGGAAGCCTAAGCCAAGAAGTGGACGCACCGAAAGGGCGGGATAAGACAAGGCGGTGGAGGTTGGTTGAAGATGATGTTACGCGGCGTTCAGAACCAGCCTTGAATAAGGAAATGAGACGACTCTTTCTTTCACTATATCATAAACGGATCTTCCCCTCCACACCAATCACGAGTTTTTCTCCATTCCTCTCGTATATCGTCGTAACGCCCTTAATGCTAGGTTTTGAAAAAGACTTTTCATGTCATTCCCATTTAGGTCCGATTCGGATCCCTCCGTTGTTTCCTTTTCCTCCCGCACCTTTTCCTCGAAATGAGAAAGAAGATGGTACACTCGAATTGTATTATTTAAGTGCTTATTGCTTGCCAAAGATCCTACTTCTACAATTGGTAGGTCACCGGGTTATTCAAATAAGTTGTGTTTTCTGTGGTTTTCCCATGTTAAAACTTCCGTACCAATTCGGTCGATCCGGAATGGATCGGTTAAACATTCTATTAGGGAGCCTGGTCTTGACTCTTCTGTGTGGTATTCATTCTCGTTCGGCTCTTGGAATCACATCCAGCCGTGGTTGGAACAGCTCGCAAAATCCAACCACTTCACCTACTTCATTGCCCCCAACCGTTTCTCGTACCTCTATTGAAACAGAATGGTTTCATGTTCCTTCATCGATTGTTTACAAGATTGAATGGCTAATTTTCCTCCGGACCCTCGATTCGATTGTTTTCCAAGAATTGGTGGTGAAACCAACCAAGATGTATGTCGTCCGACCCGACCTCAGACTCTTTCTTCCCGACCTATTTGACCCTCTGGCCGCTGTGGTATCCCGAGATCGAATTCCTCCCGGGAACACACGAAAGAAAGATATGAACTGGAGTCCCAAGAAGGTAAGAACTCCAACCTGTCCGATGCTTCTTCGGCCAAATACAATATACAAGTGGGACCTGCACTATGAGCAAGCTGTGCGAAAAACCGCTTCTTTTTTCCGGTTTCGCAACAACTTGGGCGAAATGGGGTTCTACCGGGAAACCATGGATTTTTGA

Coding sequence (CDS)

ATGTACGAAAGGCCGACAGAAGCAACGTTTCTTAGCGCGCTTTTCAAGTGCTTAGCTTCTGCTAGCGGCGGGCGGCAAGGCCATAAAGTCAGTTCAGTTGGAAGCCTAAGCCAAGAAGTGGACGCACCGAAAGGGCGGGATAAGACAAGGCGGTGGAGGTTGGTTGAAGATGATGTTACGCGGCGTTCAGAACCAGCCTTGAATAAGGAAATGAGACGACTCTTTCTTTCACTATATCATAAACGGATCTTCCCCTCCACACCAATCACGAGTTTTTCTCCATTCCTCTCGTATATCGTCGTAACGCCCTTAATGCTAGGTTTTGAAAAAGACTTTTCATGTCATTCCCATTTAGGTCCGATTCGGATCCCTCCGTTGTTTCCTTTTCCTCCCGCACCTTTTCCTCGAAATGAGAAAGAAGATGGTACACTCGAATTGTATTATTTAAGTGCTTATTGCTTGCCAAAGATCCTACTTCTACAATTGGTAGGTCACCGGGTTATTCAAATAAGTTGTGTTTTCTGTGGTTTTCCCATGTTAAAACTTCCGTACCAATTCGGTCGATCCGGAATGGATCGGTTAAACATTCTATTAGGGAGCCTGGTCTTGACTCTTCTGTGTGGTATTCATTCTCGTTCGGCTCTTGGAATCACATCCAGCCGTGGTTGGAACAGCTCGCAAAATCCAACCACTTCACCTACTTCATTGCCCCCAACCGTTTCTCGTACCTCTATTGAAACAGAATGGTTTCATGTTCCTTCATCGATTGTTTACAAGATTGAATGGCTAATTTTCCTCCGGACCCTCGATTCGATTGTTTTCCAAGAATTGGTGGTGAAACCAACCAAGATGTATGTCGTCCGACCCGACCTCAGACTCTTTCTTCCCGACCTATTTGACCCTCTGGCCGCTGTGGTATCCCGAGATCGAATTCCTCCCGGGAACACACGAAAGAAAGATATGAACTGGAGTCCCAAGAAGGTAAGAACTCCAACCTGTCCGATGCTTCTTCGGCCAAATACAATATACAAGTGGGACCTGCACTATGAGCAAGCTGTGCGAAAAACCGCTTCTTTTTTCCGGTTTCGCAACAACTTGGGCGAAATGGGGTTCTACCGGGAAACCATGGATTTTTGA

Protein sequence

MYERPTEATFLSALFKCLASASGGRQGHKVSSVGSLSQEVDAPKGRDKTRRWRLVEDDVTRRSEPALNKEMRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIVYKIEWLIFLRTLDSIVFQELVVKPTKMYVVRPDLRLFLPDLFDPLAAVVSRDRIPPGNTRKKDMNWSPKKVRTPTCPMLLRPNTIYKWDLHYEQAVRKTASFFRFRNNLGEMGFYRETMDF
Homology
[Close]
BLAST of CaUC02G033410 vs. NCBI nr
Match: YP_009913630.1 (cytochrome c biogenesis B [Luffa acutangula] >QLJ93004.1 cytochrome c biogenesis B [Luffa acutangula])

HSP 1 Score: 382.9 bits (982), Expect = 3.3e-102
Identity = 190/206 (92.23%), Postives = 193/206 (93.69%), Query Frame = 0 

Query: 71  MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 130
           MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP
Sbjct: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 131 PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLKLPYQFGRSG 190
           PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLKLPYQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLKLPYQFGRSG 120

Query: 191 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWF 250
           MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWF
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWF 180

Query: 251 HVPSSIVYKIEWLIFLRTLDSIVFQE 277
           HVPSSI Y   ++       SI  Q+
Sbjct: 181 HVPSSIGYSSPFVSLFPISVSISLQD 206

[Close]
BLAST of CaUC02G033410 vs. NCBI nr
Match: AEN56106.1 (cytochrome c biogenesis B [Cucumis melo subsp. melo] >AZP40281.1 cytochrome c biogenesis B [Cucumis melo var. momordica])

HSP 1 Score: 379.0 bits (972), Expect = 4.7e-101
Identity = 184/188 (97.87%), Postives = 186/188 (98.94%), Query Frame = 0 

Query: 71  MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 130
           MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP
Sbjct: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 131 PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLKLPYQFGRSG 190
           PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISC+FCGFPM KLPYQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG 120

Query: 191 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWF 250
           MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPT+SRTSIETEWF
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF 180

Query: 251 HVPSSIVY 259
           HVPSSI Y
Sbjct: 181 HVPSSIGY 188

[Close]
BLAST of CaUC02G033410 vs. NCBI nr
Match: YP_004849329.1 (cytochrome c biogenesis B [Cucumis sativus] >ADZ10756.1 cytochrome c biogenesis B [Cucumis sativus])

HSP 1 Score: 374.8 bits (961), Expect = 8.9e-100
Identity = 182/188 (96.81%), Postives = 185/188 (98.40%), Query Frame = 0 

Query: 71  MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 130
           MRRLFL LYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP
Sbjct: 1   MRRLFLELYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 131 PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLKLPYQFGRSG 190
           PAPFPRNEKEDGTLELYYLSAYCLPKILLLQL+GH VIQISC+FCGFPMLKLPYQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLLGHWVIQISCLFCGFPMLKLPYQFGRSG 120

Query: 191 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWF 250
           MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPT+SRTSIETEWF
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF 180

Query: 251 HVPSSIVY 259
           HVPSSI Y
Sbjct: 181 HVPSSIGY 188

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BLAST of CaUC02G033410 vs. NCBI nr
Match: QXE45588.1 (cytochrome c biogenesis B [Prosopis glandulosa])

HSP 1 Score: 368.2 bits (944), Expect = 8.3e-98
Identity = 183/206 (88.83%), Postives = 189/206 (91.75%), Query Frame = 0 

Query: 71  MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 130
           MRRLFL LYHK+IFPSTPITSFSPFLSYIVVTPL+LGFEKDFSCHSHLGPIRIPPLFPFP
Sbjct: 1   MRRLFLELYHKQIFPSTPITSFSPFLSYIVVTPLILGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 131 PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLKLPYQFGRSG 190
           PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPML+LPYQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLQLPYQFGRSG 120

Query: 191 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWF 250
           MDRLNILLGSLVLTLLCGIHSR ALGITSS GWNSSQNPTTSPTSLPPTVSRTSIETEWF
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRLALGITSSSGWNSSQNPTTSPTSLPPTVSRTSIETEWF 180

Query: 251 HVPSSIVYKIEWLIFLRTLDSIVFQE 277
           HV SSI Y   ++       SI  Q+
Sbjct: 181 HVLSSIGYSSPFVSLFPISVSISLQD 206

[Close]
BLAST of CaUC02G033410 vs. NCBI nr
Match: PRQ15603.1 (putative cytochrome c-type biogenesis protein CcmB [Rosa chinensis])

HSP 1 Score: 368.2 bits (944), Expect = 8.3e-98
Identity = 184/214 (85.98%), Postives = 192/214 (89.72%), Query Frame = 0 

Query: 63  SEPALNKEMRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIR 122
           S+   +KEMRRLFL LYHK+IFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIR
Sbjct: 3   SKERRSKEMRRLFLELYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIR 62

Query: 123 IPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLKL 182
           IPPLFPFPPAPF RNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPML+L
Sbjct: 63  IPPLFPFPPAPFSRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLQL 122

Query: 183 PYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSR 242
            YQF +SGMDRLNILLGSLVLTLLCGIHSRSALGITSS GWNSSQNPTT PTSLPPTVSR
Sbjct: 123 LYQFSQSGMDRLNILLGSLVLTLLCGIHSRSALGITSSSGWNSSQNPTTLPTSLPPTVSR 182

Query: 243 TSIETEWFHVPSSIVYKIEWLIFLRTLDSIVFQE 277
           TSIETEWFHVPSSI Y   ++       SI  Q+
Sbjct: 183 TSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD 216

[Close]
BLAST of CaUC02G033410 vs. ExPASy Swiss-Prot
Match: P93280 (Putative cytochrome c biogenesis ccmB-like mitochondrial protein OS=Arabidopsis thaliana OX=3702 GN=CCMB PE=2 SV=2)

HSP 1 Score: 282.0 bits (720), Expect = 1.0e-74
Identity = 152/188 (80.85%), Postives = 154/188 (81.91%), Query Frame = 0 

Query: 71  MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 130
           MRRLF  LY+K IF STPITSFS FL YIVVTPLMLGFEKDF CH HLG I I  LF F 
Sbjct: 1   MRRLFFELYYKLIFSSTPITSFSLFLLYIVVTPLMLGFEKDFLCHFHLGLIWISLLFSFL 60

Query: 131 PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLKLPYQFGRSG 190
            A F RNEKEDGTLELYYLS YCLPKILLLQLVGH VIQISCVFCGFPML+L YQFGRSG
Sbjct: 61  SALFFRNEKEDGTLELYYLSTYCLPKILLLQLVGHWVIQISCVFCGFPMLQLLYQFGRSG 120

Query: 191 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWF 250
           MD LNILLGSLVLTLLCGIHS  ALGITSS GWNSSQN TT PT LP TV  TSIETEWF
Sbjct: 121 MDWLNILLGSLVLTLLCGIHSCLALGITSSSGWNSSQNLTTLPTLLPLTVFCTSIETEWF 180

Query: 251 HVPSSIVY 259
           HV   I Y
Sbjct: 181 HVLLLIGY 188

[Close]
BLAST of CaUC02G033410 vs. ExPASy Swiss-Prot
Match: P38454 (Putative cytochrome c biogenesis ccmB-like mitochondrial protein OS=Marchantia polymorpha OX=3197 GN=CCMB PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.5e-54
Identity = 123/210 (58.57%), Postives = 147/210 (70.00%), Query Frame = 0 

Query: 73  RLFLSLYHKRIF--PSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 132
           ++FL L+++ I    ST IT+FS FL YIVVTPLM+GF KDF CH HLG I I  LF F 
Sbjct: 69  KIFLKLFYQHILLNLSTLITTFSLFLLYIVVTPLMIGFSKDFLCHFHLGLIWICLLFSFL 128

Query: 133 PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLKLPYQFGRSG 192
           P  F +N+ EDGTLELYYLS YCL KILL +L GH V+QIS VFC FP+L+L YQF +S 
Sbjct: 129 PERFFQNDFEDGTLELYYLSGYCLQKILLSKLYGHWVLQISGVFCSFPVLQLLYQFDQSK 188

Query: 193 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWF 252
           M+   I++GS + TL+CGIHS  ALGITS+ GWNS QN TT PT LP  V  TSIETEWF
Sbjct: 189 MNWFTIIIGSQIFTLMCGIHSCLALGITSN-GWNSLQNLTTLPTLLPLIVFCTSIETEWF 248

Query: 253 HVPSSIVYKIEWLIFLRTLDSIVFQELVVK 281
           HV   + Y + +L F   L SI  Q L+ K
Sbjct: 249 HVILLMGYLLLFLFFYPILVSITLQTLLAK 277

[Close]
BLAST of CaUC02G033410 vs. ExPASy TrEMBL
Match: A0A7D6C7C3 (Cytochrome c biogenesis B OS=Luffa acutangula OX=56866 GN=ccmB PE=3 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 1.6e-102
Identity = 190/206 (92.23%), Postives = 193/206 (93.69%), Query Frame = 0 

Query: 71  MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 130
           MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP
Sbjct: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 131 PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLKLPYQFGRSG 190
           PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLKLPYQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLKLPYQFGRSG 120

Query: 191 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWF 250
           MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWF
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWF 180

Query: 251 HVPSSIVYKIEWLIFLRTLDSIVFQE 277
           HVPSSI Y   ++       SI  Q+
Sbjct: 181 HVPSSIGYSSPFVSLFPISVSISLQD 206

[Close]
BLAST of CaUC02G033410 vs. ExPASy TrEMBL
Match: G3EU22 (Cytochrome c biogenesis B OS=Cucumis melo subsp. melo OX=412675 GN=ccmB PE=3 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 2.3e-101
Identity = 184/188 (97.87%), Postives = 186/188 (98.94%), Query Frame = 0 

Query: 71  MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 130
           MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP
Sbjct: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 131 PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLKLPYQFGRSG 190
           PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISC+FCGFPM KLPYQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG 120

Query: 191 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWF 250
           MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPT+SRTSIETEWF
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF 180

Query: 251 HVPSSIVY 259
           HVPSSI Y
Sbjct: 181 HVPSSIGY 188

[Close]
BLAST of CaUC02G033410 vs. ExPASy TrEMBL
Match: A0A3Q9CS08 (Cytochrome c biogenesis B OS=Cucumis melo var. momordica OX=2034244 GN=ccmB PE=3 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 2.3e-101
Identity = 184/188 (97.87%), Postives = 186/188 (98.94%), Query Frame = 0 

Query: 71  MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 130
           MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP
Sbjct: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 131 PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLKLPYQFGRSG 190
           PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISC+FCGFPM KLPYQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG 120

Query: 191 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWF 250
           MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPT+SRTSIETEWF
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF 180

Query: 251 HVPSSIVY 259
           HVPSSI Y
Sbjct: 181 HVPSSIGY 188

[Close]
BLAST of CaUC02G033410 vs. ExPASy TrEMBL
Match: G3EIY1 (Cytochrome c biogenesis B OS=Cucumis sativus OX=3659 GN=ccmB PE=3 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 4.3e-100
Identity = 182/188 (96.81%), Postives = 185/188 (98.40%), Query Frame = 0 

Query: 71  MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 130
           MRRLFL LYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP
Sbjct: 1   MRRLFLELYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 131 PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLKLPYQFGRSG 190
           PAPFPRNEKEDGTLELYYLSAYCLPKILLLQL+GH VIQISC+FCGFPMLKLPYQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLLGHWVIQISCLFCGFPMLKLPYQFGRSG 120

Query: 191 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWF 250
           MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPT+SRTSIETEWF
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF 180

Query: 251 HVPSSIVY 259
           HVPSSI Y
Sbjct: 181 HVPSSIGY 188

[Close]
BLAST of CaUC02G033410 vs. ExPASy TrEMBL
Match: A0A2P6P101 (Putative cytochrome c-type biogenesis protein CcmB OS=Rosa chinensis OX=74649 GN=RchiOBHm_MTg0498291 PE=3 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 4.0e-98
Identity = 184/214 (85.98%), Postives = 192/214 (89.72%), Query Frame = 0 

Query: 63  SEPALNKEMRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIR 122
           S+   +KEMRRLFL LYHK+IFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIR
Sbjct: 3   SKERRSKEMRRLFLELYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIR 62

Query: 123 IPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLKL 182
           IPPLFPFPPAPF RNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPML+L
Sbjct: 63  IPPLFPFPPAPFSRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLQL 122

Query: 183 PYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSR 242
            YQF +SGMDRLNILLGSLVLTLLCGIHSRSALGITSS GWNSSQNPTT PTSLPPTVSR
Sbjct: 123 LYQFSQSGMDRLNILLGSLVLTLLCGIHSRSALGITSSSGWNSSQNPTTLPTSLPPTVSR 182

Query: 243 TSIETEWFHVPSSIVYKIEWLIFLRTLDSIVFQE 277
           TSIETEWFHVPSSI Y   ++       SI  Q+
Sbjct: 183 TSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD 216

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BLAST of CaUC02G033410 vs. TAIR 10
Match: ATMG00110.1 (cytochrome C biogenesis 206 )

HSP 1 Score: 346.7 bits (888), Expect = 2.4e-95
Identity = 174/188 (92.55%), Postives = 175/188 (93.09%), Query Frame = 0 

Query: 71  MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 130
           MRRLFL LYHK IF STPITSFS FLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP
Sbjct: 1   MRRLFLELYHKLIFSSTPITSFSSFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 131 PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLKLPYQFGRSG 190
           PAPFPRNEKEDGTLELYYLS YCLPKILLLQLVGHRVIQIS VFCGFPML+L YQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSTYCLPKILLLQLVGHRVIQISRVFCGFPMLQLSYQFGRSG 120

Query: 191 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWF 250
           MDRLNI LGSLVLTLLCGIHSRSALGITSS GWNSSQNPTTSPT LP TVSRTSIETEWF
Sbjct: 121 MDRLNIPLGSLVLTLLCGIHSRSALGITSSSGWNSSQNPTTSPTLLPLTVSRTSIETEWF 180

Query: 251 HVPSSIVY 259
           HV SSI Y
Sbjct: 181 HVLSSIGY 188

The following BLAST results are available for this feature:
BLAST of CaUC02G033410 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009913630.13.3e-10292.23cytochrome c biogenesis B [Luffa acutangula] >QLJ93004.1 cytochrome c biogenesis... [more]
AEN56106.14.7e-10197.87cytochrome c biogenesis B [Cucumis melo subsp. melo] >AZP40281.1 cytochrome c bi... [more]
YP_004849329.18.9e-10096.81cytochrome c biogenesis B [Cucumis sativus] >ADZ10756.1 cytochrome c biogenesis ... [more]
QXE45588.18.3e-9888.83cytochrome c biogenesis B [Prosopis glandulosa][more]
PRQ15603.18.3e-9885.98putative cytochrome c-type biogenesis protein CcmB [Rosa chinensis][more]
BLAST of CaUC02G033410 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P932801.0e-7480.85Putative cytochrome c biogenesis ccmB-like mitochondrial protein OS=Arabidopsis ... [more]
P384541.5e-5458.57Putative cytochrome c biogenesis ccmB-like mitochondrial protein OS=Marchantia p... [more]
BLAST of CaUC02G033410 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7D6C7C31.6e-10292.23Cytochrome c biogenesis B OS=Luffa acutangula OX=56866 GN=ccmB PE=3 SV=1[more]
G3EU222.3e-10197.87Cytochrome c biogenesis B OS=Cucumis melo subsp. melo OX=412675 GN=ccmB PE=3 SV=... [more]
A0A3Q9CS082.3e-10197.87Cytochrome c biogenesis B OS=Cucumis melo var. momordica OX=2034244 GN=ccmB PE=3... [more]
G3EIY14.3e-10096.81Cytochrome c biogenesis B OS=Cucumis sativus OX=3659 GN=ccmB PE=3 SV=1[more]
A0A2P6P1014.0e-9885.98Putative cytochrome c-type biogenesis protein CcmB OS=Rosa chinensis OX=74649 GN... [more]
BLAST of CaUC02G033410 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG00110.12.4e-9592.55cytochrome C biogenesis 206 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..240
NoneNo IPR availablePANTHERPTHR30070:SF2CYTOCHROME C BIOGENESIS Bcoord: 67..265
IPR003544Cytochrome c-type biogenesis protein CcmBPANTHERPTHR30070HEME EXPORTER PROTEIN Bcoord: 67..265

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC02G033410.1CaUC02G033410.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0017004 cytochrome complex assembly
biological_process GO:0015886 heme transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0016020 membrane
molecular_function GO:0015232 heme transmembrane transporter activity