CaUC01G025620 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGATTAAATCCCTTTTGAAACATCTATATATTTATATGAATGGAAGGAGATGGTGAGACTGAGAAACCGATTAAGAGTTTTACATTGGTTCGAGCAGGAGAAAGAAACAGAACAAGCTTACAATCAATGGATGAACGAGTAGGACAAGCGGTGAGGAAAAAGAAACATCCGGCTCCAAGTGTACGTCTCTCTCTCTCTCTCTTTCTCTCCTCTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGGTTTGAAATTCAAATGTTTTTACTATGGATGAAGCTCAATGAGTGAATAACGGAAAGACATGTATATATGATATGATATGATATGATGGCAGGAGAAAGATGGATCGGAGAATGTAAAAATACAACCACGAGACCTGAAAATAGCATGGGGCTCCGATGACACTCAGTGGAAAATTGAGAAACCAAACGAAGAGTAAGGACCATGCTTTGCCTTGTAATTATGATGAATATATATATATATATATATATATATATATGCATATATGAATGGCAGAATGGGGTATAGAATGAAATTGTAATGAATGAATTGAATGGTCGTGATTTGTAATTAGGGAAGGGAGCTATGCAGAAGCAATCAAAGTGACGTGGCTTGAAGTAAAAGCAACATATAAGGGGGCAAAAGCAGGGAGCAAATATAGGATTGGGTTCAATATAAGCCTAAATTCTGATGCGTTTGGGTGGGATAGCAGTCCAGTGTTCCTGATGGCTAAGGTTGGAGACTCAGGATCCTACACTTGGAAGAGGCTTTATATCAATACCAGGGACATCGGGCTGACGCCTATCGACTTCCCCAGCAATTTCGAGATCAACATTCCAATCTCAGCCGACGACACCACCCTGCGCTTTGGCCTTTATGAAATCTGGGGTGGCAGATGGAAGGGAGGCTTGCGCATTCATCATGCCTTTGTTAACAAAGTTTGACTTTCATCCTCCCTCCACTCATCACATGCTTAATCACTCTCTTTCTCTATGTGTGACCACTGTTTTCTTTTTTCTTTCACTCTTTCAAACCATTACACTTATATGTTACCATCTAAATAATCCATACAATCTCATTTAAACTCCACCATTGGTTTTTGACATGCTAACTTCACTTAGATCAACAATCAAACTCTACTGTAAAGTTTATGCGGAAGGCACAATTAAATTAAATTACGCTTAAAAATGGAAGTTGATAAATAAGTAGCTTCCTGCTTCTGTGCCACTCAGATTAGCATATCTGACAAAATTCTTCCAATATGCGTTCAATAGTCCTCCTTGATGCAATCTTATTAATCTCAAATGCTCTAATTTCATCCGTGAGACCTGCATGCCAACCATGAAAAAATACGCATTTCAATGGCATGTCAAAAGCCGTAAATTATTCAACGGACTGACGCTAGAAGCTATCAGCTGCGCCACCTGTTGATATTATCCTGCAAATACTTTTCCAGAATGAAGAAGGAGAAGAAAAATTACCTGTTTGATGAAGAACTTTCAGGGGTAGTTGTGATTGGGAGGTATCAGTATTTAAAAAGACAAGAAGCTTCTGCATAAGCTCCAAAGAATCAGCAATGGCTAGGATCTCCCTCTAAATTACGCGATATGCACGGTAGACAGAAATAGGGGGGAAGAAGTAGCAACACAAAATCAGTTAGTAATGCAAGTTTCTCAAGACTGGGAACATAGACCAAAGCAAAGTTATCCTTGAATGTTGGTTCAAATATACAGCCATTCTAATGAAGGGAAAATTTTAGATTTGTGGAGTTAAAGATAGATAAAAAATAACTCCAAGAAAAAGGAGAAAATGGGAGATATGTTAGAAGAAAGGCTGGGTCATGGTAACGGAGAAAGAAATAACGAGTTCTAACTTCTAGACACATGCATATAATAGAAAGACACTTAAACATTTCGATTATATTCTATTTCAATTTTGTAATTAAGCCATCATTTATGTTCAACCTACTCCATTCCATCTAATTCTGCCGTTACTCGTCTCCCAAGTCAAAATAGAATGCAATTCCAACAATGTAATTGTAGAATTTTAGCACAGATAATTAGATTGAAGGTTATTAGAAATTAAACGATTAGATTGAAAGATTGGCAGAAGGCTTATCTATTTCAACCTTGAAGTTTTTCCGTGCATCATAATATCCAGAAACAATCACAAGAAGCTGAAGTTTCTCTACACCTGAAAAAGAAAACATTGTTTGAACGATGTTAATAAGTCAACATCTAGAAAGATGTCAGGCTGATTTCCAAAAGGAGCTG CCGATTAAATCCCTTTTGAAACATCTATATATTTATATGAATGGAAGGAGATGGTGAGACTGAGAAACCGATTAAGAGTTTTACATTGGTTCGAGCAGGAGAAAGAAACAGAACAAGCTTACAATCAATGGATGAACGAGTAGGACAAGCGGTGAGGAAAAAGAAACATCCGGCTCCAAGTGAGAAAGATGGATCGGAGAATGTAAAAATACAACCACGAGACCTGAAAATAGCATGGGGCTCCGATGACACTCAGTGGAAAATTGAGAAACCAAACGAAGAGGAAGGGAGCTATGCAGAAGCAATCAAAGTGACGTGGCTTGAAGTAAAAGCAACATATAAGGGGGCAAAAGCAGGGAGCAAATATAGGATTGGGTTCAATATAAGCCTAAATTCTGATGCGTTTGGGTGGGATAGCAGTCCAGTGTTCCTGATGGCTAAGGTTGGAGACTCAGGATCCTACACTTGGAAGAGGCTTTATATCAATACCAGGGACATCGGGCTGACGCCTATCGACTTCCCCAGCAATTTCGAGATCAACATTCCAATCTCAGCCGACGACACCACCCTGCGCTTTGGCCTTTATGAAATCTGGGGTGGCAGATGGAAGGGAGGCTTGCGCATTCATCATGCCTTTGTTAACAAAGTTTGACTTTCATCCTCCCTCCACTCATCACATGCTTAATCACTCTCTTTCTCTATGTGTGACCACTGTTTTCTTTTTTCTTTCACTCTTTCAAACCATTACACTTATATGTTACCATCTAAATAATCCATACAATCTCATTTAAACTCCACCATTGGTTTTTGACATGCTAACTTCACTTAGATCAACAATCAAACTCTACTGTAAAGTTTATGCGGAAGGCACAATTAAATTAAATTACGCTTAAAAATGGAAGTTGATAAATAAGTAGCTTCCTGCTTCTGTGCCACTCAGATTAGCATATCTGACAAAATTCTTCCAATATGCGTTCAATAGTCCTCCTTGATGCAATCTTATTAATCTCAAATGCTCTAATTTCATCCGTGAGACCTGCATGCCAACCATGAAAAAATACGCATTTCAATGGCATGTCAAAAGCCGTAAATTATTCAACGGACTGACGCTAGAAGCTATCAGCTGCGCCACCTGTTGATATTATCCTGCAAATACTTTTCCAGAATGAAGAAGGAGAAGAAAAATTACCTGTTTGATGAAGAACTTTCAGGGGTAGTTGTGATTGGGAGGTATCAGTATTTAAAAAGACAAGAAGCTTCTGCATAAGCTCCAAAGAATCAGCAATGGCTAGGATCTCCCTCTAAATTACGCGATATGCACGGTAGACAGAAATAGGGGGGAAGAAGTAGCAACACAAAATCAGTTAGTAATGCAAGTTTCTCAAGACTGGGAACATAGACCAAAGCAAAGTTATCCTTGAATGTTGGTTCAAATATACAGCCATTCTAATGAAGGGAAAATTTTAGATTTGTGGAGTTAAAGATAGATAAAAAATAACTCCAAGAAAAAGGAGAAAATGGGAGATATGTTAGAAGAAAGGCTGGGTCATGGTAACGGAGAAAGAAATAACGAGTTCTAACTTCTAGACACATGCATATAATAGAAAGACACTTAAACATTTCGATTATATTCTATTTCAATTTTGTAATTAAGCCATCATTTATGTTCAACCTACTCCATTCCATCTAATTCTGCCGTTACTCGTCTCCCAAGTCAAAATAGAATGCAATTCCAACAATGTAATTGTAGAATTTTAGCACAGATAATTAGATTGAAGGTTATTAGAAATTAAACGATTAGATTGAAAGATTGGCAGAAGGCTTATCTATTTCAACCTTGAAGTTTTTCCGTGCATCATAATATCCAGAAACAATCACAAGAAGCTGAAGTTTCTCTACACCTGAAAAAGAAAACATTGTTTGAACGATGTTAATAAGTCAACATCTAGAAAGATGTCAGGCTGATTTCCAAAAGGAGCTG ATGGAAGGAGATGGTGAGACTGAGAAACCGATTAAGAGTTTTACATTGGTTCGAGCAGGAGAAAGAAACAGAACAAGCTTACAATCAATGGATGAACGAGTAGGACAAGCGGTGAGGAAAAAGAAACATCCGGCTCCAAGTGAGAAAGATGGATCGGAGAATGTAAAAATACAACCACGAGACCTGAAAATAGCATGGGGCTCCGATGACACTCAGTGGAAAATTGAGAAACCAAACGAAGAGGAAGGGAGCTATGCAGAAGCAATCAAAGTGACGTGGCTTGAAGTAAAAGCAACATATAAGGGGGCAAAAGCAGGGAGCAAATATAGGATTGGGTTCAATATAAGCCTAAATTCTGATGCGTTTGGGTGGGATAGCAGTCCAGTGTTCCTGATGGCTAAGGTTGGAGACTCAGGATCCTACACTTGGAAGAGGCTTTATATCAATACCAGGGACATCGGGCTGACGCCTATCGACTTCCCCAGCAATTTCGAGATCAACATTCCAATCTCAGCCGACGACACCACCCTGCGCTTTGGCCTTTATGAAATCTGGGGTGGCAGATGGAAGGGAGGCTTGCGCATTCATCATGCCTTTGTTAACAAAGTTTGA MEGDGETEKPIKSFTLVRAGERNRTSLQSMDERVGQAVRKKKHPAPSEKDGSENVKIQPRDLKIAWGSDDTQWKIEKPNEEEGSYAEAIKVTWLEVKATYKGAKAGSKYRIGFNISLNSDAFGWDSSPVFLMAKVGDSGSYTWKRLYINTRDIGLTPIDFPSNFEINIPISADDTTLRFGLYEIWGGRWKGGLRIHHAFVNKV Homology
BLAST of CaUC01G025620 vs. NCBI nr
Match: XP_038877535.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida]) HSP 1 Score: 285.4 bits (729), Expect = 3.8e-73 Identity = 136/169 (80.47%), Postives = 147/169 (86.98%), Query Frame = 0
BLAST of CaUC01G025620 vs. NCBI nr
Match: XP_004134524.2 (protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus]) HSP 1 Score: 267.7 bits (683), Expect = 8.2e-68 Identity = 132/203 (65.02%), Postives = 156/203 (76.85%), Query Frame = 0
BLAST of CaUC01G025620 vs. NCBI nr
Match: KAE8647786.1 (hypothetical protein Csa_003897 [Cucumis sativus]) HSP 1 Score: 265.4 bits (677), Expect = 4.1e-67 Identity = 122/165 (73.94%), Postives = 140/165 (84.85%), Query Frame = 0
BLAST of CaUC01G025620 vs. NCBI nr
Match: XP_022146661.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia]) HSP 1 Score: 248.4 bits (633), Expect = 5.1e-62 Identity = 126/187 (67.38%), Postives = 143/187 (76.47%), Query Frame = 0
BLAST of CaUC01G025620 vs. NCBI nr
Match: XP_008439445.1 (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo]) HSP 1 Score: 241.5 bits (615), Expect = 6.3e-60 Identity = 111/154 (72.08%), Postives = 125/154 (81.17%), Query Frame = 0
BLAST of CaUC01G025620 vs. ExPASy Swiss-Prot
Match: Q9SA16 (Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 7.8e-29 Identity = 73/179 (40.78%), Postives = 95/179 (53.07%), Query Frame = 0
BLAST of CaUC01G025620 vs. ExPASy TrEMBL
Match: A0A0A0KJ41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538620 PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 4.0e-68 Identity = 132/203 (65.02%), Postives = 156/203 (76.85%), Query Frame = 0
BLAST of CaUC01G025620 vs. ExPASy TrEMBL
Match: A0A6J1D012 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Momordica charantia OX=3673 GN=LOC111015810 PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 2.5e-62 Identity = 126/187 (67.38%), Postives = 143/187 (76.47%), Query Frame = 0
BLAST of CaUC01G025620 vs. ExPASy TrEMBL
Match: A0A5A7U9J3 (Protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G00170 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 3.0e-60 Identity = 111/154 (72.08%), Postives = 125/154 (81.17%), Query Frame = 0
BLAST of CaUC01G025620 vs. ExPASy TrEMBL
Match: A0A1S3AZF3 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo OX=3656 GN=LOC103484248 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 3.0e-60 Identity = 111/154 (72.08%), Postives = 125/154 (81.17%), Query Frame = 0
BLAST of CaUC01G025620 vs. ExPASy TrEMBL
Match: A0A6J1IRT7 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478757 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 1.0e-47 Identity = 98/158 (62.03%), Postives = 118/158 (74.68%), Query Frame = 0
BLAST of CaUC01G025620 vs. TAIR 10
Match: AT1G31200.1 (phloem protein 2-A9 ) HSP 1 Score: 128.6 bits (322), Expect = 5.5e-30 Identity = 73/179 (40.78%), Postives = 95/179 (53.07%), Query Frame = 0
BLAST of CaUC01G025620 vs. TAIR 10
Match: AT1G10155.1 (phloem protein 2-A10 ) HSP 1 Score: 122.1 bits (305), Expect = 5.2e-28 Identity = 73/185 (39.46%), Postives = 97/185 (52.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|