CaUC01G017460 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATAATCTTCACAAAAATAATGGTTACTTAATTCATTTGACGTCGAAGGTAACAAACAATAATCACTCCTTCCAATTATTCTCAACATCTCTTCTCATTTCCAGGTTTAAAGTTTAAAATCGCACAAATTCTTCTATATGTATAAATAGTTCTGTACTTCAATTTCACAGTTTTTTTCGTTTTTTTTTTCTATAGGGTTTCTTTCACATGTTGTATATATCCTTTAATTTGTTGGTTTTAATTAGCTTATCTTGGTTTTGTTATATATAGAGTGAGGCTCAAGCGTCAACTTGCTCCATTTTTCTTTTCAGTTGCAAGCAAAAGTATATCGTCTCTTTGATGGAAATCTCATCGGCCAAATGGTTATCCGAACTAGTAAGGCTAAATTTAATTTTAGATGCTTATTGATTTTAATATGCTCTTAATACTTGGAATTAATTTAGATGAATGTTTTTGAGTTTTAGGAAATGATGGAGTGTTCATATGAATATGAGATGAACAATTACACCCTAGATGAGCTCAATTTTCCAGGGAGCAAAAAAGTCAATACTTTGACCTCTTCCCAATTGATTTCATTTGGGGATTCTTCAGCTGAAATTGAGAATAAGTTTGATTATGGGAGCTGTGTTAATTGGGTTGGTGTGGACAAAGATAAAGATTTCTCCTTCTTAATATCGAATCAAAATAATGGGAATTTAATTGGATTTGAAGAAGAAGGGCATGAAATTAAGAAGGCTGCAACAACAATAATGGGTCCAAATAATTATGGAAATGGTAAAGAACATGTTATAGCTGAGAGAAGACGAAGAGAGAAACTTAGCCAAAACTTTGTTGCTCTTTCAGCTCTCATCCCCGGCCTCAACAAGGTAAATACTTTAATTTCCTCAATAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTCTATTTATTAGGGTTGGTATCTCTTGTTAGAAGTACAACTAAGATTTGTCGATATTTTTACATGGATATGATAGTAAGTCGTCTAATATGACAATTTTTGCATTCCATATATGATAAGAGATTAGTAGAACTTCCAAGGAAAAGAAAAACTATATGAAAAGCTTCCAATTTCTTATCCCAATTGCTAACACCAAAAAAGGGTTTAATGTTACATTTTTTTTAATTCTTTGTGGTTTAATAAGGTTTTAAGTGAAATTGGTTTTTATACTCTTAACAATTTCATTTGTTATGTTCATTCTTTGATTAATTAACGCTAGATATATTTATAAGGATTAAAGAAAAAAATAGGGATATGAAATCATGCATGTATAATCAATAAAATTTTGGAAAAAAGGATCTCTAAATAGATATGAAACACAATATTTTTGGTGAAAGAGGGACAAAGCTTCGGTGCTTGGGGAAGCAATCAAGTATGTGAAAGAGCTACAAGAACGTCTCAAATGGGCTGAGGAAGAAGCAGCAGATCAGAAGAGAGTAATTAAATCCGTCGTGTTTGGGCCGAAAAGAATCGATCTCGACTCCGACTCCGACTCCGACGACAAAACCTCTTCATGGGACGAGAATGGTGGCGTATTTTCAGTCCAACCAATTCCTAAGATAGAAACAAGAGTTTTGGAGAAGGATGTTTTGGTAAGAATTCATTGCAAGAAACACAAAGGATGTTTAACAAACATATTAAGCCAAATAGAGAAGCTTAATCTTACAATTGTGAATAGTTGCGTTTTGCCATTTGGCCACTCCAGACTTGATATTACCATTGTTGCCAAGGTAAAACCCCTTTCTCTATTTTAATTATTACTAGATTTTTCTTAGGATAAATTTCATTAATAAATATGGATTACTTTTTGTTCTAGATGGAGGTTGGTTTCTGCATGACAGCGAGAAATCTTGGGAAGAAGCTGAGGGAGACTTTGGTCGAGTTCATATAG ATGCATAATCTTCACAAAAATAATGGTTACTTAATTCATTTGACGTCGAAGTTCTGTACTTCAATTTCACAGTTTTTTTCGTTTTTTTTTTCTATAGGGTTTCTTTCACATGTTTTGCAAGCAAAAGTATATCGTCTCTTTGATGGAAATCTCATCGGCCAAATGGTTATCCGAACTACTGAAATTGAGAATAAGTTTGATTATGGGAGCTGTGTTAATTGGGTTGGTGTGGACAAAGATAAAGATTTCTCCTTCTTAATATCGAATCAAAATAATGGGAATTTAATTGGATTTGAAGAAGAAGGGCATGAAATTAAGAAGGCTGCAACAACAATAATGGGTCCAAATAATTATGGAAATGGTAAAGAACATGTTATAGCTGAGAGAAGACGAAGAGAGAAACTTAGCCAAAACTTTGTTGCTCTTTCAGCTCTCATCCCCGGCCTCAACAAGAGGGACAAAGCTTCGGTGCTTGGGGAAGCAATCAAGTATGTGAAAGAGCTACAAGAACGTCTCAAATGGGCTGAGGAAGAAGCAGCAGATCAGAAGAGAGTAATTAAATCCGTCGTGTTTGGGCCGAAAAGAATCGATCTCGACTCCGACTCCGACTCCGACGACAAAACCTCTTCATGGGACGAGAATGGTGGCGTATTTTCAGTCCAACCAATTCCTAAGATAGAAACAAGAGTTTTGGAGAAGGATGTTTTGGTAAGAATTCATTGCAAGAAACACAAAGGATGTTTAACAAACATATTAAGCCAAATAGAGAAGCTTAATCTTACAATTGTGAATAGTTGCGTTTTGCCATTTGGCCACTCCAGACTTGATATTACCATTGTTGCCAAGATGGAGGTTGGTTTCTGCATGACAGCGAGAAATCTTGGGAAGAAGCTGAGGGAGACTTTGGTCGAGTTCATATAG ATGCATAATCTTCACAAAAATAATGGTTACTTAATTCATTTGACGTCGAAGTTCTGTACTTCAATTTCACAGTTTTTTTCGTTTTTTTTTTCTATAGGGTTTCTTTCACATGTTTTGCAAGCAAAAGTATATCGTCTCTTTGATGGAAATCTCATCGGCCAAATGGTTATCCGAACTACTGAAATTGAGAATAAGTTTGATTATGGGAGCTGTGTTAATTGGGTTGGTGTGGACAAAGATAAAGATTTCTCCTTCTTAATATCGAATCAAAATAATGGGAATTTAATTGGATTTGAAGAAGAAGGGCATGAAATTAAGAAGGCTGCAACAACAATAATGGGTCCAAATAATTATGGAAATGGTAAAGAACATGTTATAGCTGAGAGAAGACGAAGAGAGAAACTTAGCCAAAACTTTGTTGCTCTTTCAGCTCTCATCCCCGGCCTCAACAAGAGGGACAAAGCTTCGGTGCTTGGGGAAGCAATCAAGTATGTGAAAGAGCTACAAGAACGTCTCAAATGGGCTGAGGAAGAAGCAGCAGATCAGAAGAGAGTAATTAAATCCGTCGTGTTTGGGCCGAAAAGAATCGATCTCGACTCCGACTCCGACTCCGACGACAAAACCTCTTCATGGGACGAGAATGGTGGCGTATTTTCAGTCCAACCAATTCCTAAGATAGAAACAAGAGTTTTGGAGAAGGATGTTTTGGTAAGAATTCATTGCAAGAAACACAAAGGATGTTTAACAAACATATTAAGCCAAATAGAGAAGCTTAATCTTACAATTGTGAATAGTTGCGTTTTGCCATTTGGCCACTCCAGACTTGATATTACCATTGTTGCCAAGATGGAGGTTGGTTTCTGCATGACAGCGAGAAATCTTGGGAAGAAGCTGAGGGAGACTTTGGTCGAGTTCATATAG MHNLHKNNGYLIHLTSKFCTSISQFFSFFFSIGFLSHVLQAKVYRLFDGNLIGQMVIRTTEIENKFDYGSCVNWVGVDKDKDFSFLISNQNNGNLIGFEEEGHEIKKAATTIMGPNNYGNGKEHVIAERRRREKLSQNFVALSALIPGLNKRDKASVLGEAIKYVKELQERLKWAEEEAADQKRVIKSVVFGPKRIDLDSDSDSDDKTSSWDENGGVFSVQPIPKIETRVLEKDVLVRIHCKKHKGCLTNILSQIEKLNLTIVNSCVLPFGHSRLDITIVAKMEVGFCMTARNLGKKLRETLVEFI Homology
BLAST of CaUC01G017460 vs. NCBI nr
Match: XP_038882258.1 (transcription factor NAI1-like [Benincasa hispida]) HSP 1 Score: 364.8 bits (935), Expect = 7.4e-97 Identity = 198/253 (78.26%), Postives = 211/253 (83.40%), Query Frame = 0
BLAST of CaUC01G017460 vs. NCBI nr
Match: KAE8647532.1 (hypothetical protein Csa_003884 [Cucumis sativus]) HSP 1 Score: 303.5 bits (776), Expect = 2.0e-78 Identity = 168/234 (71.79%), Postives = 189/234 (80.77%), Query Frame = 0
BLAST of CaUC01G017460 vs. NCBI nr
Match: XP_008440468.1 (PREDICTED: transcription factor bHLH25-like [Cucumis melo] >XP_008440469.1 PREDICTED: transcription factor bHLH25-like [Cucumis melo]) HSP 1 Score: 289.7 bits (740), Expect = 3.0e-74 Identity = 165/234 (70.51%), Postives = 184/234 (78.63%), Query Frame = 0
BLAST of CaUC01G017460 vs. NCBI nr
Match: XP_022977221.1 (transcription factor bHLH25-like [Cucurbita maxima]) HSP 1 Score: 254.6 bits (649), Expect = 1.1e-63 Identity = 145/235 (61.70%), Postives = 167/235 (71.06%), Query Frame = 0
BLAST of CaUC01G017460 vs. NCBI nr
Match: KAG6604086.1 (Transcription factor basic helix-loop-helix 25, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 248.4 bits (633), Expect = 7.8e-62 Identity = 143/234 (61.11%), Postives = 165/234 (70.51%), Query Frame = 0
BLAST of CaUC01G017460 vs. ExPASy Swiss-Prot
Match: Q8S3F1 (Transcription factor NAI1 OS=Arabidopsis thaliana OX=3702 GN=NAI1 PE=2 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 8.1e-38 Identity = 88/191 (46.07%), Postives = 127/191 (66.49%), Query Frame = 0
BLAST of CaUC01G017460 vs. ExPASy Swiss-Prot
Match: Q9T072 (Transcription factor bHLH25 OS=Arabidopsis thaliana OX=3702 GN=BHLH25 PE=2 SV=2) HSP 1 Score: 155.6 bits (392), Expect = 9.0e-37 Identity = 93/190 (48.95%), Postives = 130/190 (68.42%), Query Frame = 0
BLAST of CaUC01G017460 vs. ExPASy Swiss-Prot
Match: Q1PF17 (Transcription factor bHLH18 OS=Arabidopsis thaliana OX=3702 GN=BHLH18 PE=1 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.9e-34 Identity = 98/224 (43.75%), Postives = 137/224 (61.16%), Query Frame = 0
BLAST of CaUC01G017460 vs. ExPASy Swiss-Prot
Match: Q1PF16 (Transcription factor bHLH19 OS=Arabidopsis thaliana OX=3702 GN=BHLH19 PE=1 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.3e-32 Identity = 78/183 (42.62%), Postives = 119/183 (65.03%), Query Frame = 0
BLAST of CaUC01G017460 vs. ExPASy Swiss-Prot
Match: A0A3Q7HRZ6 (Transcription factor MYC2 OS=Solanum lycopersicum OX=4081 GN=MYC2 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.8e-14 Identity = 52/152 (34.21%), Postives = 86/152 (56.58%), Query Frame = 0
BLAST of CaUC01G017460 vs. ExPASy TrEMBL
Match: A0A0A0KLM8 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G497120 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 1.1e-74 Identity = 167/252 (66.27%), Postives = 188/252 (74.60%), Query Frame = 0
BLAST of CaUC01G017460 vs. ExPASy TrEMBL
Match: A0A1S3B1X4 (transcription factor bHLH25-like OS=Cucumis melo OX=3656 GN=LOC103484897 PE=4 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 1.5e-74 Identity = 165/234 (70.51%), Postives = 184/234 (78.63%), Query Frame = 0
BLAST of CaUC01G017460 vs. ExPASy TrEMBL
Match: A0A6J1IJA5 (transcription factor bHLH25-like OS=Cucurbita maxima OX=3661 GN=LOC111477596 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 5.2e-64 Identity = 145/235 (61.70%), Postives = 167/235 (71.06%), Query Frame = 0
BLAST of CaUC01G017460 vs. ExPASy TrEMBL
Match: A0A6J1GFR7 (transcription factor bHLH25-like OS=Cucurbita moschata OX=3662 GN=LOC111453758 PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 1.4e-61 Identity = 143/234 (61.11%), Postives = 163/234 (69.66%), Query Frame = 0
BLAST of CaUC01G017460 vs. ExPASy TrEMBL
Match: A0A5D3CQZ4 (Transcription factor bHLH25-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003580 PE=4 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 6.0e-52 Identity = 116/154 (75.32%), Postives = 130/154 (84.42%), Query Frame = 0
BLAST of CaUC01G017460 vs. TAIR 10
Match: AT2G22770.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 159.1 bits (401), Expect = 5.8e-39 Identity = 88/191 (46.07%), Postives = 127/191 (66.49%), Query Frame = 0
BLAST of CaUC01G017460 vs. TAIR 10
Match: AT4G37850.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 155.6 bits (392), Expect = 6.4e-38 Identity = 93/190 (48.95%), Postives = 130/190 (68.42%), Query Frame = 0
BLAST of CaUC01G017460 vs. TAIR 10
Match: AT2G22750.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 147.9 bits (372), Expect = 1.3e-35 Identity = 98/224 (43.75%), Postives = 137/224 (61.16%), Query Frame = 0
BLAST of CaUC01G017460 vs. TAIR 10
Match: AT2G22750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 143.7 bits (361), Expect = 2.5e-34 Identity = 94/208 (45.19%), Postives = 131/208 (62.98%), Query Frame = 0
BLAST of CaUC01G017460 vs. TAIR 10
Match: AT2G22760.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 141.7 bits (356), Expect = 9.5e-34 Identity = 78/183 (42.62%), Postives = 119/183 (65.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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