Homology
BLAST of CaUC01G011100 vs. NCBI nr
Match:
XP_038877791.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Benincasa hispida])
HSP 1 Score: 1367.4 bits (3538), Expect = 0.0e+00
Identity = 678/704 (96.31%), Postives = 694/704 (98.58%), Query Frame = 0
Query: 30 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQE 89
MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTL NSSRLFKLNPIPRHSKPFLQITNVSLQE
Sbjct: 1 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLCNSSRLFKLNPIPRHSKPFLQITNVSLQE 60
Query: 90 YAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRIS 149
YAPQETHNP+PS+DEISKYPDGKS SSSKSSVWVNPRSPRASKLRKQSYEARY SLTRIS
Sbjct: 61 YAPQETHNPSPSNDEISKYPDGKSSSSSKSSVWVNPRSPRASKLRKQSYEARYASLTRIS 120
Query: 150 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTI 209
ESLDSCNPC+EDVADVLK IGSNIL+QDAVVVLNNMSNSQTAL+ALRYFQDVLKSSKQ I
Sbjct: 121 ESLDSCNPCQEDVADVLKEIGSNILQQDAVVVLNNMSNSQTALLALRYFQDVLKSSKQAI 180
Query: 210 FYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 269
FYNVTLKVFRKCRDMEGAEKLFEEML+RGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
Query: 270 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 329
PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 330 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 389
DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
Query: 390 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 449
LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYV EAVEVFQDMKSSGT
Sbjct: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVYEAVEVFQDMKSSGT 420
Query: 450 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVV 509
CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAK VDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 510 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEK 569
RTF+RL+ELGLTPDDRFCGCLLNVITQTPKEELSKLIDCV RANPKLGFVV+LL+GEQ+K
Sbjct: 481 RTFSRLIELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGFVVKLLMGEQDK 540
Query: 570 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRS 629
EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL+LGLTLQ+YKDLQSRS
Sbjct: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQLYKDLQSRS 600
Query: 630 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMASV 689
PTQWSLYLKGLSLGA LTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKG+ASV
Sbjct: 601 PTQWSLYLKGLSLGAGLTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 690 FESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 734
FESHLKEL APFHEAP+KVGWFLTTKVAAKSWLESR+SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of CaUC01G011100 vs. NCBI nr
Match:
XP_008464281.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis melo] >KAA0042345.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK15469.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1340.1 bits (3467), Expect = 0.0e+00
Identity = 664/704 (94.32%), Postives = 685/704 (97.30%), Query Frame = 0
Query: 30 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQE 89
MAFQLCHSP TFFT HHSLSNSLT QRKTTL NSS LFKLNPIPRHS PFLQITN+SLQE
Sbjct: 1 MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60
Query: 90 YAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRIS 149
++PQETHN PSDDEISKY D KSGSSSKSSVWVNPRSPRASKLRKQSYEARY SL RIS
Sbjct: 61 HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120
Query: 150 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTI 209
ESLDSCNPCE DVADVLKVIG+NILEQDAVVVLNNMSNSQTAL+ALRYFQD+LKSSKQTI
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
Query: 210 FYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 269
FYNVTLKVFRKCRDMEGAE+LFEEML RGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
Query: 270 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 329
PSFDCNPDDVTYS MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 330 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 389
DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIK+GFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYASL 360
Query: 390 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 449
LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+FQDMK+SGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSGT 420
Query: 450 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVV 509
CSPDSWTFSSMITIYSCSGKVSEAEEMLN+MVEAGFDPNIFVLTSLIQCYGKAK VDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 510 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEK 569
RTFN+L+ELGLTPDDRFCGCLLNVITQTPKEE+SKLIDCV RANPKLGFVVELLLGEQ+K
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQDK 540
Query: 570 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRS 629
EG+FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRS 600
Query: 630 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMASV 689
PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKG+ASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 690 FESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 734
FESHLKEL APFHEAP+KVGWFLTTKVAAKSWLESR+SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of CaUC01G011100 vs. NCBI nr
Match:
XP_004139516.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis sativus] >KGN64994.1 hypothetical protein Csa_022775 [Cucumis sativus])
HSP 1 Score: 1320.8 bits (3417), Expect = 0.0e+00
Identity = 654/704 (92.90%), Postives = 679/704 (96.45%), Query Frame = 0
Query: 30 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQE 89
MAFQLC+SP TFFT+HH LSNSLT QRKTTL NSS LFKL+PIPRHSKPFLQITNVSLQE
Sbjct: 1 MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
Query: 90 YAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRIS 149
+APQ+T N PS DEISKYPD KSGSSS SSVWVNPRSPRASKLRKQSYEARY SL R+S
Sbjct: 61 HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
Query: 150 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTI 209
ESLDS NPCE DVADVLKVIG+NILE+DA++VLNNMSNSQTAL+ALRYFQD+LKSSKQTI
Sbjct: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
Query: 210 FYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 269
FYNVTLKVFRKCRDMEGAEKLFEEM+ RGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
Query: 270 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 329
PSFDCNPDDVTYS MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 330 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 389
DGCLNVYEEMKAIGIKPNLVIYN LLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
Query: 390 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 449
LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+FQDMKSSGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
Query: 450 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVV 509
CSPDSWTFSSMITIYSC GKVSEAEEMLN+MVEAGFDPNIFVLTSLIQCYGKAK VDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 510 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEK 569
RTFN+L+ELGLTPDDRFCGCLLNVITQTPK EL KLIDCV RANPKLGFVVELLLGEQ+K
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
Query: 570 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRS 629
EG+FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL+LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
Query: 630 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMASV 689
PTQWSLYLKGLSLGAALTALHVWI DLTKVLESGEELPPLLGINTGHGKHKYSDKG+ASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 690 FESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 734
FESHLKEL APFHEAP+KVGWFLTTKVAAKSWLESR+SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of CaUC01G011100 vs. NCBI nr
Match:
XP_022142513.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Momordica charantia])
HSP 1 Score: 1283.5 bits (3320), Expect = 0.0e+00
Identity = 638/704 (90.62%), Postives = 663/704 (94.18%), Query Frame = 0
Query: 30 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQE 89
MAFQLCHSPSTFF+DHH LSNSL SQ + TL SS FKLNP P HSK L+ITNVSLQE
Sbjct: 1 MAFQLCHSPSTFFSDHHPLSNSLNSQHRITLRKSSHRFKLNPTPHHSKTCLRITNVSLQE 60
Query: 90 YAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRIS 149
YA QE NP P+ DE SKYPDGKS SSSKSSVWVNPRSPRASKLR QSYEARY SLTRIS
Sbjct: 61 YAAQEAQNPIPTQDESSKYPDGKSNSSSKSSVWVNPRSPRASKLRNQSYEARYASLTRIS 120
Query: 150 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTI 209
ESLDSCNPCEEDVADVLK +GSNILEQDAV VLNNMSNS TAL+AL+ FQ VLKSSK+ I
Sbjct: 121 ESLDSCNPCEEDVADVLKGMGSNILEQDAVAVLNNMSNSSTALLALQMFQKVLKSSKKAI 180
Query: 210 FYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 269
YNVTLKV RK RDMEGAEKLF+EML+RGVKPDNVTFST+ISCARLCSLPNKAVEWFEKM
Sbjct: 181 LYNVTLKVLRKSRDMEGAEKLFDEMLKRGVKPDNVTFSTVISCARLCSLPNKAVEWFEKM 240
Query: 270 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 329
PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFST+IKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTLIKIHGVAGNY 300
Query: 330 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 389
DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
Query: 390 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 449
LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+F+DMKSSG
Sbjct: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFEDMKSSGA 420
Query: 450 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVV 509
CSPDSWTFSSMITIYSCSGKVSEAEEMLNEM+EAGFDPNIFVLTSLIQCYGK K VDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKGKRVDDVV 480
Query: 510 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEK 569
RTF+RL+ELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERAN KLG+VV+LLLGEQ+K
Sbjct: 481 RTFDRLVELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANSKLGYVVKLLLGEQDK 540
Query: 570 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRS 629
EGD RTEASEL SVVSADVRKAYCNCLIDLCVNLDLL+KACELL+LGLTLQIY LQS S
Sbjct: 541 EGDLRTEASELLSVVSADVRKAYCNCLIDLCVNLDLLEKACELLDLGLTLQIYTGLQSTS 600
Query: 630 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMASV 689
PTQWSL+LKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKG+ASV
Sbjct: 601 PTQWSLHLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 690 FESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 734
FESHLKEL APFHEAP+KVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 704
BLAST of CaUC01G011100 vs. NCBI nr
Match:
KAG6583722.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1273.8 bits (3295), Expect = 0.0e+00
Identity = 634/705 (89.93%), Postives = 664/705 (94.18%), Query Frame = 0
Query: 30 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTL-YNSSRLFKLNPIPRHSKPFLQITNVSLQ 89
MAFQL H PSTFFTDH NSLT KTTL +SSR+FKLNPIP HSKPFLQITNVS Q
Sbjct: 1 MAFQLSHFPSTFFTDH----NSLTFHYKTTLCKSSSRVFKLNPIPYHSKPFLQITNVSQQ 60
Query: 90 EYAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRI 149
EYAPQET NP+PSDDEISK+PDGKSGSSSK+SVWVNP SPRASKLRKQSYEARY SL +I
Sbjct: 61 EYAPQETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKI 120
Query: 150 SESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQT 209
SESLDSCNPCE+DVADVLK I S ILEQDA+ VLNNMSNSQTAL+ LRYFQDVLKSSKQ
Sbjct: 121 SESLDSCNPCEDDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVLRYFQDVLKSSKQA 180
Query: 210 IFYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 269
+FYNVTLKVFRKCRD EGAEKLF+EMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK
Sbjct: 181 VFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240
Query: 270 MPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGN 329
MPSFDCNPD++TYS MIDAYGRAGNVDMAFSLYDRARTENWRID +TFSTMIKIHGVAGN
Sbjct: 241 MPSFDCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGN 300
Query: 330 YDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYAS 389
YDGCLNVYEEMKA+GIKPNL IYNSLL AMGRAKRPWQIKTIYKEM KNGFSPSWATYAS
Sbjct: 301 YDGCLNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYAS 360
Query: 390 LLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSG 449
LLRAY RARY ED +LVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEA+EVF+DMKSSG
Sbjct: 361 LLRAYARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSG 420
Query: 450 TCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDV 509
TCSPDSWTFSSMITIYSCSG VSEAEEMLNEM+EAGFDPNIFVLTSLIQCYGKAK VDDV
Sbjct: 421 TCSPDSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDV 480
Query: 510 VRTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQE 569
VRTF+RLLELGLTPDDRFCGCLLNVITQTPK ELSKLIDCVERANPKLGFVV+LLLGE++
Sbjct: 481 VRTFDRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKD 540
Query: 570 KEGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSR 629
EGDFRTEASELFSVVS DVRKAYCNCLIDLCVNLDLLDKACELL+LGL++QIY DLQSR
Sbjct: 541 MEGDFRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSR 600
Query: 630 SPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMAS 689
SPTQWSLYLKGLSLGAALTALHVWINDLTK L+SGEELPPLLGINTGHGKHKYSDKG++S
Sbjct: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSS 660
Query: 690 VFESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 734
VFESHLKEL APFHEAP+KVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 701
BLAST of CaUC01G011100 vs. ExPASy Swiss-Prot
Match:
Q8GWE0 (Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=P67 PE=1 SV=3)
HSP 1 Score: 937.2 bits (2421), Expect = 1.1e-271
Identity = 463/702 (65.95%), Postives = 565/702 (80.48%), Query Frame = 0
Query: 34 LCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQEYAPQ 93
LC SPS+ D L N L+ K+T + + N HS+ LQ T+VS+QE PQ
Sbjct: 6 LCSSPSSLLHDPLPLCNLLSVYPKSTPRSFLSSYNPNSSHFHSRNLLQATHVSVQEAIPQ 65
Query: 94 ETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRISESLD 153
+ D P ++SKS VWVNP+SPRAS+LR++SY++RY+SL +++ESLD
Sbjct: 66 SEKSKLVDVDLPIPEP-----TASKSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLD 125
Query: 154 SCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTIFYNV 213
+C P E DV DV+ G + EQDAVV LNNM+N +TA + L + +K S++ I YNV
Sbjct: 126 ACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNV 185
Query: 214 TLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFD 273
T+KVFRK +D+E +EKLF+EMLERG+KPDN TF+TIISCAR +P +AVEWFEKM SF
Sbjct: 186 TMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFG 245
Query: 274 CNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCL 333
C PD+VT +AMIDAYGRAGNVDMA SLYDRARTE WRID TFST+I+I+GV+GNYDGCL
Sbjct: 246 CEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCL 305
Query: 334 NVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAY 393
N+YEEMKA+G+KPNLVIYN L+D+MGRAKRPWQ K IYK++I NGF+P+W+TYA+L+RAY
Sbjct: 306 NIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAY 365
Query: 394 GRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGTCSPD 453
GRARYG+DAL +Y+EMKEKGL L VILYNTLL+MCAD YV+EA E+FQDMK+ TC PD
Sbjct: 366 GRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPD 425
Query: 454 SWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVVRTFN 513
SWTFSS+IT+Y+CSG+VSEAE L +M EAGF+P +FVLTS+IQCYGKAK VDDVVRTF+
Sbjct: 426 SWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFD 485
Query: 514 RLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQE-KEGD 573
++LELG+TPDDRFCGCLLNV+TQTP EE+ KLI CVE+A PKLG VV++L+ EQ +EG
Sbjct: 486 QVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGV 545
Query: 574 FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRSPTQ 633
F+ EASEL + +DV+KAY NCLIDLCVNL+ L++ACE+L+LGL IY LQS+S TQ
Sbjct: 546 FKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQ 605
Query: 634 WSLYLKGLSLGAALTALHVWINDLTK-VLESGEELPPLLGINTGHGKHKYSDKGMASVFE 693
WSL+LK LSLGAALTALHVW+NDL++ LESGEE PPLLGINTGHGKHKYSDKG+A+VFE
Sbjct: 606 WSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFE 665
Query: 694 SHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 734
SHLKEL APFHEAPDKVGWFLTT VAAK+WLESR S V+A
Sbjct: 666 SHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESRRSAGGVSA 702
BLAST of CaUC01G011100 vs. ExPASy Swiss-Prot
Match:
Q10PZ4 (Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0215900 PE=3 SV=1)
HSP 1 Score: 720.7 bits (1859), Expect = 1.7e-206
Identity = 368/674 (54.60%), Postives = 477/674 (70.77%), Query Frame = 0
Query: 65 RLFKLNPIPRHSKPFLQITNVSLQEYAPQETH-NPTPSDDEISKYPDGKSGSSSKSSVWV 124
R L+ P++ P VS+Q+ P + NP+P G+S ++S+ VWV
Sbjct: 13 RAISLSFQPKNPSPSPATARVSVQDPPPPPSDANPSP----------GRSSNTSR-YVWV 72
Query: 125 NPRSPRASKL-RKQSYEARYTSLTRISESLDSCNPCEEDVADVLK-VIGSNILEQDAVVV 184
NP SPRA+ L R ++ R L + +L +C E VA L+ EQDAV+V
Sbjct: 73 NPNSPRAAGLARARAGSGRRARLAAAAAALAACEAGEAPVAAALEAAFPEPPSEQDAVIV 132
Query: 185 LNNMSNSQTALI-ALRYFQDVLKSSKQTIFYNVTLKVFRKCRDMEGAEKLFEEMLERGVK 244
LN S A++ AL +F + K+ I YNV LK RK R AE L+EEML GV+
Sbjct: 133 LNTTSARPAAVVLALWWFLRNAEVRKEVILYNVALKALRKRRRWSDAEALWEEMLREGVQ 192
Query: 245 PDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSL 304
PDN TFST+ISCAR C +P KAVEWFEKMP F C+PD +TYSA+IDAYGRAG+ + A L
Sbjct: 193 PDNATFSTVISCARACGMPGKAVEWFEKMPDFGCSPDMLTYSAVIDAYGRAGDAETALRL 252
Query: 305 YDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGR 364
YDRAR E W++DP +T+I++H +GN+DG LNV+EEMKA G+KPNLV+YN++LDAMGR
Sbjct: 253 YDRARAEKWQLDPVICATVIRVHSSSGNFDGALNVFEEMKAAGVKPNLVVYNTVLDAMGR 312
Query: 365 AKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALLVYKEMKEKGLQLNVIL 424
A RPW +KTI++E++ P+ ATY LL AY RARYGEDA+ VY+ MK++ + ++V+L
Sbjct: 313 AMRPWVVKTIHRELVSQEAVPNKATYCCLLHAYTRARYGEDAMAVYRVMKDEVMDIDVVL 372
Query: 425 YNTLLAMCADVGYVNEAVEVFQDMKSS--GTCSPDSWTFSSMITIYSCSGKVSEAEEMLN 484
YN LL+MCAD+GYV EA E+F+DMK+S PDSW++SSM+T+YSC+G V+ AE +LN
Sbjct: 373 YNMLLSMCADIGYVEEAEEIFRDMKASMDSRSKPDSWSYSSMVTLYSCTGNVAGAEGILN 432
Query: 485 EMVEAGFDPNIFVLTSLIQCYGKAKHVDDVVRTFNRLLELGLTPDDRFCGCLLNVITQTP 544
EMVEAGF PNIF+LTSLI+CYGKA DDVVR+F L +LG+TPDDRFCGCLL V TP
Sbjct: 433 EMVEAGFKPNIFILTSLIRCYGKAGRTDDVVRSFAMLEDLGITPDDRFCGCLLTVAAGTP 492
Query: 545 KEELSKLIDCVERANPKLGFVVELLLGEQEKEGDFRTEASELFSVVSADVRKAYCNCLID 604
+EL K+I C++R++ +LG VV LL+ R A EL VR YCNCL+D
Sbjct: 493 ADELGKVIGCIDRSSAQLGAVVRLLVDAAAPSEPLREAAGELLGGARGVVRMPYCNCLMD 552
Query: 605 LCVNLDLLDKACELLELGLTLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTK 664
L VNL ++KAC LL++ L L IY ++Q+R+ TQWSL+L+GLS+GAALT LHVW++DL
Sbjct: 553 LAVNLSQMEKACALLDVALRLGIYSNVQTRTQTQWSLHLRGLSVGAALTTLHVWMSDLYA 612
Query: 665 VLESGEELPPLLGINTGHGKHKYSDKGMASVFESHLKELKAPFHEAPDKVGWFLTTKVAA 724
L++G+ELPPLLGI+TG GK+ YS KG+A+VFESHLKEL APFHEAPDK GWFLTT VAA
Sbjct: 613 ALQAGDELPPLLGIHTGQGKNTYSYKGLATVFESHLKELDAPFHEAPDKAGWFLTTSVAA 672
Query: 725 KSWLESRASPELVA 733
+ WLE++ S ELVA
Sbjct: 673 RHWLETKKSAELVA 675
BLAST of CaUC01G011100 vs. ExPASy Swiss-Prot
Match:
B4F8Z1 (Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4577 GN=ATP4 PE=2 SV=1)
HSP 1 Score: 720.3 bits (1858), Expect = 2.2e-206
Identity = 379/709 (53.46%), Postives = 488/709 (68.83%), Query Frame = 0
Query: 34 LCHSPSTFFTD--HHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQEYA 93
LC SPS+ H +S S + + +P+ H VS+QE
Sbjct: 6 LCRSPSSLLPSWPHRPISASFNPKNPS-----------SPVAAH---------VSVQETP 65
Query: 94 PQETHNPTPSDDEISKYPDGKSGSSSKSS--VWVNPRSPRASKL-RKQSYEARYTSLTRI 153
PQ PSD P+G SSS ++ +WVNP SPRA+ + R ++ R L
Sbjct: 66 PQPQDPSPPSDSN----PNGTRPSSSSNTRFLWVNPNSPRAADVARARAGSGRRARLASA 125
Query: 154 SESLDSCNPCEEDVADVLK-VIGSNILEQDAVVVLNN--MSNSQTALIALRYFQDVLKSS 213
+ +L +C E V L+ EQDAV+VLN + ++TA++ALR+F K
Sbjct: 126 AAALGACETTESAVEAALQAAFPEPPSEQDAVIVLNTAAATRAETAVLALRWFLGNAKVR 185
Query: 214 KQTIFYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEW 273
K+ I YNV LK+ RK R E L+ EML GV+PDN TFST+ISCAR C L +KAVEW
Sbjct: 186 KKVILYNVVLKLLRKKRLWSETEALWAEMLRDGVQPDNATFSTVISCARACGLHSKAVEW 245
Query: 274 FEKMPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGV 333
F+KMP F C+PD +TYSA+IDAYG AGN + A LYDRAR E W++DP ST+IK+H
Sbjct: 246 FDKMPEFGCSPDMLTYSAVIDAYGHAGNSEAALRLYDRARAEKWQLDPVICSTVIKVHST 305
Query: 334 AGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWAT 393
+GN+DG LNV+EEMKAIG++PNLV+YN++LDAMGRA RPW +KTI++EM+ PS AT
Sbjct: 306 SGNFDGALNVFEEMKAIGVRPNLVVYNTMLDAMGRALRPWVVKTIHREMVDQQVQPSRAT 365
Query: 394 YASLLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMK 453
Y LL AY RARYGEDA+ VY+ MK++ + ++V+LYN LL+MCAD+GYV+EA E+F+DMK
Sbjct: 366 YCCLLHAYTRARYGEDAMAVYRLMKDEAMGIDVMLYNMLLSMCADIGYVDEAEEIFRDMK 425
Query: 454 SS--GTCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAK 513
+S PDSW++SSM+T+YS + V AE +LNEMVEAGF PNIFVLTSLI+CYGK
Sbjct: 426 ASMGAHSKPDSWSYSSMVTLYSSTANVLSAEGILNEMVEAGFKPNIFVLTSLIRCYGKVG 485
Query: 514 HVDDVVRTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELL 573
DDVVR+F L +LG+ PDDRFCGCLL+V TP EEL K+I C+ER+N +LG VV+LL
Sbjct: 486 RTDDVVRSFGMLQDLGIIPDDRFCGCLLSVAANTPAEELGKVISCIERSNVQLGAVVKLL 545
Query: 574 LGEQEKEGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYK 633
+ E FR A EL V+ YCNCL+DLCVNL+ ++KAC LL+ L IY
Sbjct: 546 VDRSSSE-SFREAARELLRSSRGVVKMPYCNCLMDLCVNLNQMEKACALLDAAQQLGIYA 605
Query: 634 DLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEE-LPPLLGINTGHGKHKYS 693
++Q+R+ TQWSL+L+GLS+GAALT LHVW+NDL L++G E LPPLLGI+TG GK+ YS
Sbjct: 606 NIQTRTQTQWSLHLRGLSVGAALTTLHVWMNDLYTSLQTGNEGLPPLLGIHTGQGKNTYS 665
Query: 694 DKGMASVFESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELV 732
D+G+A++FE+HLKEL APFHEAPDK GWFLTT VAAK WLES+A+ ELV
Sbjct: 666 DRGLAAMFEAHLKELDAPFHEAPDKAGWFLTTNVAAKQWLESKAASELV 689
BLAST of CaUC01G011100 vs. ExPASy Swiss-Prot
Match:
Q9LS25 (Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g46580 PE=2 SV=1)
HSP 1 Score: 473.0 bits (1216), Expect = 6.1e-132
Identity = 270/720 (37.50%), Postives = 410/720 (56.94%), Query Frame = 0
Query: 26 TITGMAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLN--------PIPRHSK 85
T+ A +C +P T HSL K +L+ SR KLN P +
Sbjct: 3 TVLTTAIDVCFNPQNSDTKKHSLF------LKPSLFRQSRSRKLNISCSSLKQPKTLEEE 62
Query: 86 PFLQITNVSLQEYAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQ- 145
P T ++ P +I P SVWVNP P+ S L Q
Sbjct: 63 PITTKTPSLSEQLKPLSATTLRQEQTQILSKP---------KSVWVNPTRPKRSVLSLQR 122
Query: 146 ------SYEARYTSLTRISESLDSCNPCEE-DVADVLKVIGSNILEQDAVVVLNNMSNSQ 205
SY + L + L+S E+ + +L I +A++VLN++ Q
Sbjct: 123 QKRSAYSYNPQIKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQ 182
Query: 206 TALIALRYFQDVLKSSKQTIFYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTI 265
+ + +TIFYNVT+K R R + E++ EM++ GV+ DN+T+STI
Sbjct: 183 KTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTI 242
Query: 266 ISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENW 325
I+CA+ C+L NKA+EWFE+M PD+VTYSA++D Y ++G V+ SLY+RA W
Sbjct: 243 ITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGW 302
Query: 326 RIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKT 385
+ D FS + K+ G AG+YDG V +EMK++ +KPN+V+YN+LL+AMGRA +P ++
Sbjct: 303 KPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARS 362
Query: 386 IYKEMIKNGFSPSWATYASLLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCA 445
++ EM++ G +P+ T +L++ YG+AR+ DAL +++EMK K ++ ILYNTLL MCA
Sbjct: 363 LFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCA 422
Query: 446 DVGYVNEAVEVFQDMKSSGTCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNI 505
D+G EA +F DMK S C PD++++++M+ IY GK +A E+ EM++AG N+
Sbjct: 423 DIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNV 482
Query: 506 FVLTSLIQCYGKAKHVDDVVRTFNRLLELGLTPDDRFCGCLLNVITQ-TPKEELSKLIDC 565
T L+QC GKAK +DDVV F+ ++ G+ PDDR CGCLL+V+ E+ K++ C
Sbjct: 483 MGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMAC 542
Query: 566 VERANPKLGFVVELLLGEQEKEGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDK 625
+ERAN KL V L++ E+ + + E + + + R+ +CNCLID+C + ++
Sbjct: 543 LERANKKLVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHER 602
Query: 626 ACELLELGLTLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPP 685
A ELL LG +Y L +++ +WSL ++ LS+GAA TAL W+ L +++ EELP
Sbjct: 603 AHELLYLGTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPE 662
Query: 686 LLGINTGHGKHKYSDKGMASVFESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASP 729
L TG G H++S +G+A+ F HL++L APF ++ D+ G F+ TK SWLES+ P
Sbjct: 663 LFLAQTGTGTHRFS-QGLANSFALHLQQLSAPFRQS-DRPGIFVATKEDLVSWLESKFPP 705
BLAST of CaUC01G011100 vs. ExPASy Swiss-Prot
Match:
Q9SIC9 (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)
HSP 1 Score: 194.1 bits (492), Expect = 5.5e-48
Identity = 149/591 (25.21%), Postives = 284/591 (48.05%), Query Frame = 0
Query: 172 NILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQ--TIFYNVTLKVFRKCRDMEGAEK 231
N++ +AV+ + +A ++F ++ ++ Q I +N L V + E A
Sbjct: 302 NLVTYNAVIDACGKGGMEFKQVA-KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARN 361
Query: 232 LFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSAMIDAYG 291
LF+EM R ++ D +++T++ + A E +MP P+ V+YS +ID +
Sbjct: 362 LFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFA 421
Query: 292 RAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLV 351
+AG D A +L+ R +D +++T++ I+ G + L++ EM ++GIK ++V
Sbjct: 422 KAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV 481
Query: 352 IYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALLVYKEM 411
YN+LL G+ + ++K ++ EM + P+ TY++L+ Y + ++A+ +++E
Sbjct: 482 TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF 541
Query: 412 KEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGTCSPDSWTFSSMITI------ 471
K GL+ +V+LY+ L+ G V AV + +M G SP+ T++S+I
Sbjct: 542 KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG-ISPNVVTYNSIIDAFGRSAT 601
Query: 472 ------YSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLI---------QCYGKAKHVDDV 531
YS G + + L+ + E + I + L C + + +
Sbjct: 602 MDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCI 661
Query: 532 VRTFNRLLELGLTPDDRFCGCLLNVITQTPK-EELSKLIDCVERANPKL-GFVVELLLGE 591
+ F ++ +L + P+ +LN ++ E+ S L++ + + K+ G V LL+G+
Sbjct: 662 LEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQ 721
Query: 592 QEKEGDFRTEASELFSVVS---ADVRKAYCNCLIDLCVNLDLLDKACELLEL-GLTLQIY 651
+E + +A LF V+ A+ N L D+ + + EL+ L G + Q++
Sbjct: 722 RE---NVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFG-QKRGAELVALEGRSRQVW 781
Query: 652 KDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHK-- 711
+++ S S L L +S GAA +H W+ ++ ++ G ELP +L I TG GKH
Sbjct: 782 ENVWSDS----CLDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKV 841
Query: 712 YSDKGMASVFESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELV 732
D + E L+ + APFH + +G F ++ +WL A+ +L+
Sbjct: 842 VGDGALRRAVEVLLRGMDAPFHLSKCNMGRFTSSGSVVATWLRESATLKLL 882
BLAST of CaUC01G011100 vs. ExPASy TrEMBL
Match:
A0A5A7TLM5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00400 PE=3 SV=1)
HSP 1 Score: 1340.1 bits (3467), Expect = 0.0e+00
Identity = 664/704 (94.32%), Postives = 685/704 (97.30%), Query Frame = 0
Query: 30 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQE 89
MAFQLCHSP TFFT HHSLSNSLT QRKTTL NSS LFKLNPIPRHS PFLQITN+SLQE
Sbjct: 1 MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60
Query: 90 YAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRIS 149
++PQETHN PSDDEISKY D KSGSSSKSSVWVNPRSPRASKLRKQSYEARY SL RIS
Sbjct: 61 HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120
Query: 150 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTI 209
ESLDSCNPCE DVADVLKVIG+NILEQDAVVVLNNMSNSQTAL+ALRYFQD+LKSSKQTI
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
Query: 210 FYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 269
FYNVTLKVFRKCRDMEGAE+LFEEML RGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
Query: 270 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 329
PSFDCNPDDVTYS MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 330 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 389
DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIK+GFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYASL 360
Query: 390 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 449
LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+FQDMK+SGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSGT 420
Query: 450 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVV 509
CSPDSWTFSSMITIYSCSGKVSEAEEMLN+MVEAGFDPNIFVLTSLIQCYGKAK VDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 510 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEK 569
RTFN+L+ELGLTPDDRFCGCLLNVITQTPKEE+SKLIDCV RANPKLGFVVELLLGEQ+K
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQDK 540
Query: 570 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRS 629
EG+FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRS 600
Query: 630 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMASV 689
PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKG+ASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 690 FESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 734
FESHLKEL APFHEAP+KVGWFLTTKVAAKSWLESR+SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of CaUC01G011100 vs. ExPASy TrEMBL
Match:
A0A1S3CL39 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502208 PE=3 SV=1)
HSP 1 Score: 1340.1 bits (3467), Expect = 0.0e+00
Identity = 664/704 (94.32%), Postives = 685/704 (97.30%), Query Frame = 0
Query: 30 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQE 89
MAFQLCHSP TFFT HHSLSNSLT QRKTTL NSS LFKLNPIPRHS PFLQITN+SLQE
Sbjct: 1 MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60
Query: 90 YAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRIS 149
++PQETHN PSDDEISKY D KSGSSSKSSVWVNPRSPRASKLRKQSYEARY SL RIS
Sbjct: 61 HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120
Query: 150 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTI 209
ESLDSCNPCE DVADVLKVIG+NILEQDAVVVLNNMSNSQTAL+ALRYFQD+LKSSKQTI
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
Query: 210 FYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 269
FYNVTLKVFRKCRDMEGAE+LFEEML RGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
Query: 270 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 329
PSFDCNPDDVTYS MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 330 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 389
DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIK+GFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYASL 360
Query: 390 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 449
LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+FQDMK+SGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSGT 420
Query: 450 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVV 509
CSPDSWTFSSMITIYSCSGKVSEAEEMLN+MVEAGFDPNIFVLTSLIQCYGKAK VDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 510 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEK 569
RTFN+L+ELGLTPDDRFCGCLLNVITQTPKEE+SKLIDCV RANPKLGFVVELLLGEQ+K
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQDK 540
Query: 570 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRS 629
EG+FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRS 600
Query: 630 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMASV 689
PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKG+ASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 690 FESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 734
FESHLKEL APFHEAP+KVGWFLTTKVAAKSWLESR+SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of CaUC01G011100 vs. ExPASy TrEMBL
Match:
A0A0A0LVP1 (Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G173140 PE=3 SV=1)
HSP 1 Score: 1320.8 bits (3417), Expect = 0.0e+00
Identity = 654/704 (92.90%), Postives = 679/704 (96.45%), Query Frame = 0
Query: 30 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQE 89
MAFQLC+SP TFFT+HH LSNSLT QRKTTL NSS LFKL+PIPRHSKPFLQITNVSLQE
Sbjct: 1 MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
Query: 90 YAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRIS 149
+APQ+T N PS DEISKYPD KSGSSS SSVWVNPRSPRASKLRKQSYEARY SL R+S
Sbjct: 61 HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
Query: 150 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTI 209
ESLDS NPCE DVADVLKVIG+NILE+DA++VLNNMSNSQTAL+ALRYFQD+LKSSKQTI
Sbjct: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
Query: 210 FYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 269
FYNVTLKVFRKCRDMEGAEKLFEEM+ RGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
Query: 270 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 329
PSFDCNPDDVTYS MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 330 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 389
DGCLNVYEEMKAIGIKPNLVIYN LLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
Query: 390 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 449
LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+FQDMKSSGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
Query: 450 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVV 509
CSPDSWTFSSMITIYSC GKVSEAEEMLN+MVEAGFDPNIFVLTSLIQCYGKAK VDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 510 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEK 569
RTFN+L+ELGLTPDDRFCGCLLNVITQTPK EL KLIDCV RANPKLGFVVELLLGEQ+K
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
Query: 570 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRS 629
EG+FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL+LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
Query: 630 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMASV 689
PTQWSLYLKGLSLGAALTALHVWI DLTKVLESGEELPPLLGINTGHGKHKYSDKG+ASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 690 FESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 734
FESHLKEL APFHEAP+KVGWFLTTKVAAKSWLESR+SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of CaUC01G011100 vs. ExPASy TrEMBL
Match:
A0A6J1CNE5 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012613 PE=3 SV=1)
HSP 1 Score: 1283.5 bits (3320), Expect = 0.0e+00
Identity = 638/704 (90.62%), Postives = 663/704 (94.18%), Query Frame = 0
Query: 30 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQE 89
MAFQLCHSPSTFF+DHH LSNSL SQ + TL SS FKLNP P HSK L+ITNVSLQE
Sbjct: 1 MAFQLCHSPSTFFSDHHPLSNSLNSQHRITLRKSSHRFKLNPTPHHSKTCLRITNVSLQE 60
Query: 90 YAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRIS 149
YA QE NP P+ DE SKYPDGKS SSSKSSVWVNPRSPRASKLR QSYEARY SLTRIS
Sbjct: 61 YAAQEAQNPIPTQDESSKYPDGKSNSSSKSSVWVNPRSPRASKLRNQSYEARYASLTRIS 120
Query: 150 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTI 209
ESLDSCNPCEEDVADVLK +GSNILEQDAV VLNNMSNS TAL+AL+ FQ VLKSSK+ I
Sbjct: 121 ESLDSCNPCEEDVADVLKGMGSNILEQDAVAVLNNMSNSSTALLALQMFQKVLKSSKKAI 180
Query: 210 FYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 269
YNVTLKV RK RDMEGAEKLF+EML+RGVKPDNVTFST+ISCARLCSLPNKAVEWFEKM
Sbjct: 181 LYNVTLKVLRKSRDMEGAEKLFDEMLKRGVKPDNVTFSTVISCARLCSLPNKAVEWFEKM 240
Query: 270 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 329
PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFST+IKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTLIKIHGVAGNY 300
Query: 330 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 389
DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
Query: 390 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 449
LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+F+DMKSSG
Sbjct: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFEDMKSSGA 420
Query: 450 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVV 509
CSPDSWTFSSMITIYSCSGKVSEAEEMLNEM+EAGFDPNIFVLTSLIQCYGK K VDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKGKRVDDVV 480
Query: 510 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEK 569
RTF+RL+ELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERAN KLG+VV+LLLGEQ+K
Sbjct: 481 RTFDRLVELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANSKLGYVVKLLLGEQDK 540
Query: 570 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRS 629
EGD RTEASEL SVVSADVRKAYCNCLIDLCVNLDLL+KACELL+LGLTLQIY LQS S
Sbjct: 541 EGDLRTEASELLSVVSADVRKAYCNCLIDLCVNLDLLEKACELLDLGLTLQIYTGLQSTS 600
Query: 630 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMASV 689
PTQWSL+LKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKG+ASV
Sbjct: 601 PTQWSLHLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 690 FESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 734
FESHLKEL APFHEAP+KVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 704
BLAST of CaUC01G011100 vs. ExPASy TrEMBL
Match:
A0A6J1EHV4 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434309 PE=3 SV=1)
HSP 1 Score: 1269.2 bits (3283), Expect = 0.0e+00
Identity = 633/705 (89.79%), Postives = 661/705 (93.76%), Query Frame = 0
Query: 30 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNS-SRLFKLNPIPRHSKPFLQITNVSLQ 89
MAFQL H PSTFFTDH NSLT KTTL S SR+FKLNPIP HSKPFLQITNVS Q
Sbjct: 1 MAFQLSHFPSTFFTDH----NSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQ 60
Query: 90 EYAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRI 149
EYAPQET NP+PSDDEISK+PDGKSGSSSK+SVWVNP SPRASKLRKQSYEARY SL +I
Sbjct: 61 EYAPQETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKI 120
Query: 150 SESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQT 209
SESLDSCNPCE DVADVLK I S ILEQDA+ VLNNMSNSQTAL+ RYFQDVLKSSKQ
Sbjct: 121 SESLDSCNPCEVDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQA 180
Query: 210 IFYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 269
+FYNVTLKVFRKCRD EGAEKLF+EMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK
Sbjct: 181 VFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240
Query: 270 MPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGN 329
MPSFDCNPD++TYS MIDAYGRAGNVDMAFSLYDRARTENWRID +TFSTMIKIHGVAGN
Sbjct: 241 MPSFDCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGN 300
Query: 330 YDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYAS 389
YDGCLNVYEEMKA+GIKPNL IYNSLL AMGRAKRPWQIKTIYKEM KNGFSPSWATYAS
Sbjct: 301 YDGCLNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYAS 360
Query: 390 LLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSG 449
LLRAY RARY ED +LVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEA+EVF+DMKSSG
Sbjct: 361 LLRAYARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSG 420
Query: 450 TCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDV 509
TCSPDSWTFSSMITIYSCSG VSEAEEMLNEM+EAGFDPNIFVLTSLIQCYGKAK VDDV
Sbjct: 421 TCSPDSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDV 480
Query: 510 VRTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQE 569
VRTF+RLLELGLTPDDRFCGCLLNVITQTPK ELSKLIDCVERANPKLGFVV+LLLGE++
Sbjct: 481 VRTFDRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKD 540
Query: 570 KEGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSR 629
EGDFRTEASELFSVVS DVRKAYCNCLIDLCVNLDLLDKACELL+LGL++QIY DLQSR
Sbjct: 541 MEGDFRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSR 600
Query: 630 SPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMAS 689
SPTQWSLYLKGLSLGAALTALHVWINDLTK L+SGEELPPLLGINTGHGKHKYSDKG++S
Sbjct: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSS 660
Query: 690 VFESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 734
VFESHLKEL APFHEAP+KVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 701
BLAST of CaUC01G011100 vs. TAIR 10
Match:
AT4G16390.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 937.2 bits (2421), Expect = 8.1e-273
Identity = 463/702 (65.95%), Postives = 565/702 (80.48%), Query Frame = 0
Query: 34 LCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQEYAPQ 93
LC SPS+ D L N L+ K+T + + N HS+ LQ T+VS+QE PQ
Sbjct: 6 LCSSPSSLLHDPLPLCNLLSVYPKSTPRSFLSSYNPNSSHFHSRNLLQATHVSVQEAIPQ 65
Query: 94 ETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRISESLD 153
+ D P ++SKS VWVNP+SPRAS+LR++SY++RY+SL +++ESLD
Sbjct: 66 SEKSKLVDVDLPIPEP-----TASKSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLD 125
Query: 154 SCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTIFYNV 213
+C P E DV DV+ G + EQDAVV LNNM+N +TA + L + +K S++ I YNV
Sbjct: 126 ACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNV 185
Query: 214 TLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFD 273
T+KVFRK +D+E +EKLF+EMLERG+KPDN TF+TIISCAR +P +AVEWFEKM SF
Sbjct: 186 TMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFG 245
Query: 274 CNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCL 333
C PD+VT +AMIDAYGRAGNVDMA SLYDRARTE WRID TFST+I+I+GV+GNYDGCL
Sbjct: 246 CEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCL 305
Query: 334 NVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAY 393
N+YEEMKA+G+KPNLVIYN L+D+MGRAKRPWQ K IYK++I NGF+P+W+TYA+L+RAY
Sbjct: 306 NIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAY 365
Query: 394 GRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGTCSPD 453
GRARYG+DAL +Y+EMKEKGL L VILYNTLL+MCAD YV+EA E+FQDMK+ TC PD
Sbjct: 366 GRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPD 425
Query: 454 SWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVVRTFN 513
SWTFSS+IT+Y+CSG+VSEAE L +M EAGF+P +FVLTS+IQCYGKAK VDDVVRTF+
Sbjct: 426 SWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFD 485
Query: 514 RLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQE-KEGD 573
++LELG+TPDDRFCGCLLNV+TQTP EE+ KLI CVE+A PKLG VV++L+ EQ +EG
Sbjct: 486 QVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGV 545
Query: 574 FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRSPTQ 633
F+ EASEL + +DV+KAY NCLIDLCVNL+ L++ACE+L+LGL IY LQS+S TQ
Sbjct: 546 FKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQ 605
Query: 634 WSLYLKGLSLGAALTALHVWINDLTK-VLESGEELPPLLGINTGHGKHKYSDKGMASVFE 693
WSL+LK LSLGAALTALHVW+NDL++ LESGEE PPLLGINTGHGKHKYSDKG+A+VFE
Sbjct: 606 WSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFE 665
Query: 694 SHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 734
SHLKEL APFHEAPDKVGWFLTT VAAK+WLESR S V+A
Sbjct: 666 SHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESRRSAGGVSA 702
BLAST of CaUC01G011100 vs. TAIR 10
Match:
AT5G46580.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 473.0 bits (1216), Expect = 4.3e-133
Identity = 270/720 (37.50%), Postives = 410/720 (56.94%), Query Frame = 0
Query: 26 TITGMAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLN--------PIPRHSK 85
T+ A +C +P T HSL K +L+ SR KLN P +
Sbjct: 3 TVLTTAIDVCFNPQNSDTKKHSLF------LKPSLFRQSRSRKLNISCSSLKQPKTLEEE 62
Query: 86 PFLQITNVSLQEYAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQ- 145
P T ++ P +I P SVWVNP P+ S L Q
Sbjct: 63 PITTKTPSLSEQLKPLSATTLRQEQTQILSKP---------KSVWVNPTRPKRSVLSLQR 122
Query: 146 ------SYEARYTSLTRISESLDSCNPCEE-DVADVLKVIGSNILEQDAVVVLNNMSNSQ 205
SY + L + L+S E+ + +L I +A++VLN++ Q
Sbjct: 123 QKRSAYSYNPQIKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQ 182
Query: 206 TALIALRYFQDVLKSSKQTIFYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTI 265
+ + +TIFYNVT+K R R + E++ EM++ GV+ DN+T+STI
Sbjct: 183 KTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTI 242
Query: 266 ISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENW 325
I+CA+ C+L NKA+EWFE+M PD+VTYSA++D Y ++G V+ SLY+RA W
Sbjct: 243 ITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGW 302
Query: 326 RIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKT 385
+ D FS + K+ G AG+YDG V +EMK++ +KPN+V+YN+LL+AMGRA +P ++
Sbjct: 303 KPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARS 362
Query: 386 IYKEMIKNGFSPSWATYASLLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCA 445
++ EM++ G +P+ T +L++ YG+AR+ DAL +++EMK K ++ ILYNTLL MCA
Sbjct: 363 LFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCA 422
Query: 446 DVGYVNEAVEVFQDMKSSGTCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNI 505
D+G EA +F DMK S C PD++++++M+ IY GK +A E+ EM++AG N+
Sbjct: 423 DIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNV 482
Query: 506 FVLTSLIQCYGKAKHVDDVVRTFNRLLELGLTPDDRFCGCLLNVITQ-TPKEELSKLIDC 565
T L+QC GKAK +DDVV F+ ++ G+ PDDR CGCLL+V+ E+ K++ C
Sbjct: 483 MGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMAC 542
Query: 566 VERANPKLGFVVELLLGEQEKEGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDK 625
+ERAN KL V L++ E+ + + E + + + R+ +CNCLID+C + ++
Sbjct: 543 LERANKKLVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHER 602
Query: 626 ACELLELGLTLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPP 685
A ELL LG +Y L +++ +WSL ++ LS+GAA TAL W+ L +++ EELP
Sbjct: 603 AHELLYLGTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPE 662
Query: 686 LLGINTGHGKHKYSDKGMASVFESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASP 729
L TG G H++S +G+A+ F HL++L APF ++ D+ G F+ TK SWLES+ P
Sbjct: 663 LFLAQTGTGTHRFS-QGLANSFALHLQQLSAPFRQS-DRPGIFVATKEDLVSWLESKFPP 705
BLAST of CaUC01G011100 vs. TAIR 10
Match:
AT2G31400.1 (genomes uncoupled 1 )
HSP 1 Score: 194.1 bits (492), Expect = 3.9e-49
Identity = 149/591 (25.21%), Postives = 284/591 (48.05%), Query Frame = 0
Query: 172 NILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQ--TIFYNVTLKVFRKCRDMEGAEK 231
N++ +AV+ + +A ++F ++ ++ Q I +N L V + E A
Sbjct: 302 NLVTYNAVIDACGKGGMEFKQVA-KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARN 361
Query: 232 LFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSAMIDAYG 291
LF+EM R ++ D +++T++ + A E +MP P+ V+YS +ID +
Sbjct: 362 LFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFA 421
Query: 292 RAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLV 351
+AG D A +L+ R +D +++T++ I+ G + L++ EM ++GIK ++V
Sbjct: 422 KAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV 481
Query: 352 IYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALLVYKEM 411
YN+LL G+ + ++K ++ EM + P+ TY++L+ Y + ++A+ +++E
Sbjct: 482 TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF 541
Query: 412 KEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGTCSPDSWTFSSMITI------ 471
K GL+ +V+LY+ L+ G V AV + +M G SP+ T++S+I
Sbjct: 542 KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG-ISPNVVTYNSIIDAFGRSAT 601
Query: 472 ------YSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLI---------QCYGKAKHVDDV 531
YS G + + L+ + E + I + L C + + +
Sbjct: 602 MDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCI 661
Query: 532 VRTFNRLLELGLTPDDRFCGCLLNVITQTPK-EELSKLIDCVERANPKL-GFVVELLLGE 591
+ F ++ +L + P+ +LN ++ E+ S L++ + + K+ G V LL+G+
Sbjct: 662 LEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQ 721
Query: 592 QEKEGDFRTEASELFSVVS---ADVRKAYCNCLIDLCVNLDLLDKACELLEL-GLTLQIY 651
+E + +A LF V+ A+ N L D+ + + EL+ L G + Q++
Sbjct: 722 RE---NVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFG-QKRGAELVALEGRSRQVW 781
Query: 652 KDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHK-- 711
+++ S S L L +S GAA +H W+ ++ ++ G ELP +L I TG GKH
Sbjct: 782 ENVWSDS----CLDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKV 841
Query: 712 YSDKGMASVFESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELV 732
D + E L+ + APFH + +G F ++ +WL A+ +L+
Sbjct: 842 VGDGALRRAVEVLLRGMDAPFHLSKCNMGRFTSSGSVVATWLRESATLKLL 882
BLAST of CaUC01G011100 vs. TAIR 10
Match:
AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 166.0 bits (419), Expect = 1.1e-40
Identity = 100/350 (28.57%), Postives = 177/350 (50.57%), Query Frame = 0
Query: 193 IALRYFQDVLKSSK-QTIFYNVTLKVFRKCRDMEG----AEKLFEEMLERGVKPDNVTFS 252
+ALR F +K Q++ N + + EG A +F + E G D +++
Sbjct: 153 LALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYT 212
Query: 253 TIISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSAMIDAYGRAGNV-DMAFSLYDRART 312
++IS +AV F+KM C P +TY+ +++ +G+ G + SL ++ ++
Sbjct: 213 SLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKS 272
Query: 313 ENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQ 372
+ D T++T+I + V+EEMKA G + V YN+LLD G++ RP +
Sbjct: 273 DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
Query: 373 IKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLA 432
+ EM+ NGFSPS TY SL+ AY R ++A+ + +M EKG + +V Y TLL+
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 433 MCADVGYVNEAVEVFQDMKSSGTCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFD 492
G V A+ +F++M+++G C P+ TF++ I +Y GK +E ++ +E+ G
Sbjct: 393 GFERAGKVESAMSIFEEMRNAG-CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 452
Query: 493 PNIFVLTSLIQCYGKAKHVDDVVRTFNRLLELGLTPDDRFCGCLLNVITQ 537
P+I +L+ +G+ +V F + G P+ L++ ++
Sbjct: 453 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501
BLAST of CaUC01G011100 vs. TAIR 10
Match:
AT1G18900.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 159.1 bits (401), Expect = 1.4e-38
Identity = 134/567 (23.63%), Postives = 244/567 (43.03%), Query Frame = 0
Query: 164 DVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTIFYNVTLKVFRKCRD 223
+ L+ +G I A VL M++ AL + + Y + + +
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 224 MEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSA 283
KL +EM+ G +P+ VT++ +I + N+A+ F +M C PD VTY
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 284 MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIG 343
+ID + +AG +D+A +Y R + D T+S +I G AG+ ++ EM G
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 344 IKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDAL 403
PNLV YN ++D +A+ +Y++M GF P TY+ ++ G Y E+A
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 404 LVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGTCSPDSWTFSSMITI 463
V+ EM++K + +Y L+ + G V +A + +Q M +G P+ T +S+++
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG-LRPNVPTCNSLLST 619
Query: 464 YSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCY--GKAKHVDDVVRTFNRLLELGLT 523
+ K++EA E+L M+ G P++ T L+ C G++K L++G
Sbjct: 620 FLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSK------------LDMG-- 679
Query: 524 PDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEKEGDFRTEASELF 583
FCG L+ +P F++++ + E + R A+
Sbjct: 680 ----FCGQLM-----------------ASTGHPAHMFLLKMPAAGPDGE-NVRNHANNFL 739
Query: 584 SVVSADVR---KAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKD-LQSRSPTQWSLYL 643
++ ++ R + + ++D ++A + E+ ++ D L+ +S + W + L
Sbjct: 740 DLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINL 799
Query: 644 KGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHK--YSDKGMASVFESHLK 703
+S G A+TAL + K + + P + I TG G+ + E L
Sbjct: 800 HVMSEGTAVTALSRTLAWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLN 849
Query: 704 ELKAPFHEAPDKVGWFLTTKVAAKSWL 723
+PF G F+ + WL
Sbjct: 860 IFGSPFFTESGNSGCFVGSGEPLNRWL 849
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038877791.1 | 0.0e+00 | 96.31 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Benincasa ... | [more] |
| XP_008464281.1 | 0.0e+00 | 94.32 | PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic ... | [more] |
| XP_004139516.1 | 0.0e+00 | 92.90 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis sa... | [more] |
| XP_022142513.1 | 0.0e+00 | 90.63 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Momordica ... | [more] |
| KAG6583722.1 | 0.0e+00 | 89.93 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q8GWE0 | 1.1e-271 | 65.95 | Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidop... | [more] |
| Q10PZ4 | 1.7e-206 | 54.60 | Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza... | [more] |
| B4F8Z1 | 2.2e-206 | 53.46 | Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4... | [more] |
| Q9LS25 | 6.1e-132 | 37.50 | Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidop... | [more] |
| Q9SIC9 | 5.5e-48 | 25.21 | Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7TLM5 | 0.0e+00 | 94.32 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A1S3CL39 | 0.0e+00 | 94.32 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucumis ... | [more] |
| A0A0A0LVP1 | 0.0e+00 | 92.90 | Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G173140 PE=3 SV... | [more] |
| A0A6J1CNE5 | 0.0e+00 | 90.63 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Momordic... | [more] |
| A0A6J1EHV4 | 0.0e+00 | 89.79 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucurbit... | [more] |
