CaUC01G010340 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCACAGGATGGTTGGAGGATCTAAAGATCTAGAATTTGAGCCTATGGAGAAATTGAATATCACGGGATGGTTAGATGGTTACCGAAAACCTAGATTCTGGGCCTTTGAGAAGTACCTCTCGTAGGATGGTCAGAGGACCGACGGTTTAACTTTTGAGCCCATAAGAGGTAGGTTTTTATGCACATAGAGAGAATGACGATCTGCTGAGCCAAGTAGAGCTAGTAGGGAATGAGTACGGTATAGAGATAACCTCCAGTATTGTGATTTGAGTAGGTAACCTCATTATGATGTGTATATAAGATGTTTGAAATGTTTAAGGGTCAAGAGGGTCTCTATGATTGTTTGCCACTCACTAGGTATCAATCTCACTCTTTTCTTTTGTGTTTTCCTTCTCAAGTAAGTAAAGGAGTTCCCGTTGTTGTGTGAAGTCGAGGTATGCCACAAGATAATTATACTTTACTAGACATTACTAAGTTGTAAAATAAGCTATAAGTTTGTCTGAGAATTGTATAAATGTTAACCATTCCATCCTTGTTGTTACGCTTGGTTTGGGCACCAAATGAGAATAGTTTGAGATGGACAGTAAATGTCACAAGAGAGTGATGTTTGTTGTCTTATTACGCCTCCTCTTGGGTTAAAGAGGTTAATCTGGGAGGGGGGTGACACAATGATGCTCCAACTTAAATTTATATATTTGCTTCCGTTTTAGGGCAAAATGTATGGAGAAAAGGAGGAGGAACACAACCCCAGCTCGATTTTTCTTTCTCTTTCTCACATCTTAGCTTAGTTTTTCTTCTTAATTTTGGCTTGTAATCATGGATTGAGAACTCTCCCCTCTACTTTCTTTGTGTATGAAGATGTTGAGGTAAGTATTTTCTAGTTCTTGGGAGCAAACCTATGTAATTATTTTGAGACTTATCCTTGTATGAACTTCATATTTTGATTTTTGTTTCTTTGAATCTAATGTATATTTAGATGTATGTTTTTAAGTGATTGATATCGAACCTAATTAGGACTCAAGACTTGTTTTAATTGATAGCTATCGAACCCCTTTAGGACTCAAGACTTGTAGTTTAATTAGAGCCTTTCCTTTAGTTGATAATTAGGACACTTATTTACCTTAATTCTATGAGTTGGTTGCTTGTAGCGTCGAAGAGTTTGATTAAATTAAACAGGTCGTTGTGTAAACAATCAAATATGCATGTGTTTAACCAAAAGTAAGTCAGTGATAGAAATTACGTAGGAACCCAATTGCTCCCAAGAACTAGAGCATCTCACCCTTGGTTTCATTTACCCCTTATCTTTACTTTCTCTTCTTTAATTTTCTCACCCTTGGTAATTAGCTAAACAAAATAGTGTTTGCAGTTCGTGTGGATCGACCCGAATTTGTCACTTGTACTAAGCCATCGTGGTATAGGTAGTAGGGTCCGGTATTATGAATGAAGCCCGGAAGGAATCTCATCAAGGAGGGTGGGATTCTAAAAGGACTCATTCATGAGGTGCTAGTGTGGATGGCTGAGAAGTTGAGTCGTGAAGAATTTATGGACTATGTGGGAAGACAGGAATAAGGTGAACTGTTATTCCCCCCTCATTCCAATGGATTGGAAGAACGAATGGATCGAAAATTATGTTTTTGATGTTAGGAGGGTGGGTGGTCGTCTCGGTCATGTGGCGTCATAGTTCAGTGCAGAGGTGGTTCCCGCCAGTGAGGGGTGGCTTCAAGTTAAACGTTGACGTGGCTTGTCATCTGAATCAGTCGGAGATTGGGCTGGGCGATATGATTAGACATGATGGTGGAAAGGTGGTTGTGGCCCAAGCTCTATTCCGTTTGGGTTGTTTGAATGTTGAGGCAGGGGAGATTTCGACTTTGTTGGCTGGTTTGCTGCTGGCTCATAACTTAGTGTGTGTGGATCTGTGGGTTGAATCTAATATAGAGATTGTGGTGAAGAACCTCCATTCAACTAACTTTCCTTCTTCTCCTTATGCTGAAATCTATGTTGAAGCTTTAGCTTTGGGTTCTAGTTGGAAATTAAGGACCTTTAGTTTGGTTCCTAGAGGTTGTAATATAATGGTCTATAATCTAGCCCATCAATCATGCTGTGTCAAGTATTCTGACCTTCATGAGTGGCTTTCCCAAATTGTAGGACTTTAA ATGCACAGGATGGTTGGAGGATCTAAAGATCTAGAATTTGAGCCTATGGAGAAATTGAATATCACGGGATGGTTAGATGGTTACCGAAAACCTAGATTCTGGGCCTTTGAGAAAGAGAATGACGATCTGCTGAGCCAAGTAGAGCTAGTAGGGAATGAGTACGGAGGGTGGGTGGTCGTCTCGGTCATGTGGCGTCATAGTTCAGTGCAGAGGTGGTTCCCGCCAGTGAGGGGTGGCTTCAAGTTAAACGTTGACGTGGCTTGTCATCTGAATCAGTCGGAGATTGGGCTGGGCGATATGATTAGACATGATGGTGGAAAGGTGGTTGTGGCCCAAGCTCTATTCCGTTTGGGTTGTTTGAATGTTGAGGCAGGGGAGATTTCGACTTTGTTGGCTGGTTTGCTGCTGGCTCATAACTTAGTGTGTGTGGATCTGTGGGTTGAATCTAATATAGAGATTGTGGTGAAGAACCTCCATTCAACTAACTTTCCTTCTTCTCCTTATGCTGAAATCTATGTTGAAGCTTTAGCTTTGGGTTCTAGTTGGAAATTAAGGACCTTTAGTTTGGTTCCTAGAGGTTGTAATATAATGGTCTATAATCTAGCCCATCAATCATGCTGTGTCAAGTATTCTGACCTTCATGAGTGGCTTTCCCAAATTGTAGGACTTTAA ATGCACAGGATGGTTGGAGGATCTAAAGATCTAGAATTTGAGCCTATGGAGAAATTGAATATCACGGGATGGTTAGATGGTTACCGAAAACCTAGATTCTGGGCCTTTGAGAAAGAGAATGACGATCTGCTGAGCCAAGTAGAGCTAGTAGGGAATGAGTACGGAGGGTGGGTGGTCGTCTCGGTCATGTGGCGTCATAGTTCAGTGCAGAGGTGGTTCCCGCCAGTGAGGGGTGGCTTCAAGTTAAACGTTGACGTGGCTTGTCATCTGAATCAGTCGGAGATTGGGCTGGGCGATATGATTAGACATGATGGTGGAAAGGTGGTTGTGGCCCAAGCTCTATTCCGTTTGGGTTGTTTGAATGTTGAGGCAGGGGAGATTTCGACTTTGTTGGCTGGTTTGCTGCTGGCTCATAACTTAGTGTGTGTGGATCTGTGGGTTGAATCTAATATAGAGATTGTGGTGAAGAACCTCCATTCAACTAACTTTCCTTCTTCTCCTTATGCTGAAATCTATGTTGAAGCTTTAGCTTTGGGTTCTAGTTGGAAATTAAGGACCTTTAGTTTGGTTCCTAGAGGTTGTAATATAATGGTCTATAATCTAGCCCATCAATCATGCTGTGTCAAGTATTCTGACCTTCATGAGTGGCTTTCCCAAATTGTAGGACTTTAA MHRMVGGSKDLEFEPMEKLNITGWLDGYRKPRFWAFEKENDDLLSQVELVGNEYGGWVVVSVMWRHSSVQRWFPPVRGGFKLNVDVACHLNQSEIGLGDMIRHDGGKVVVAQALFRLGCLNVEAGEISTLLAGLLLAHNLVCVDLWVESNIEIVVKNLHSTNFPSSPYAEIYVEALALGSSWKLRTFSLVPRGCNIMVYNLAHQSCCVKYSDLHEWLSQIVGL Homology
BLAST of CaUC01G010340 vs. NCBI nr
Match: XP_030939647.1 (uncharacterized protein LOC115964488 [Quercus lobata]) HSP 1 Score: 70.5 bits (171), Expect = 2.1e-08 Identity = 47/158 (29.75%), Postives = 73/158 (46.20%), Query Frame = 0
BLAST of CaUC01G010340 vs. NCBI nr
Match: XP_023873208.1 (uncharacterized protein LOC111985788 [Quercus suber]) HSP 1 Score: 69.7 bits (169), Expect = 3.6e-08 Identity = 50/190 (26.32%), Postives = 83/190 (43.68%), Query Frame = 0
BLAST of CaUC01G010340 vs. NCBI nr
Match: XP_015380596.1 (uncharacterized protein LOC107174324 [Citrus sinensis]) HSP 1 Score: 68.9 bits (167), Expect = 6.1e-08 Identity = 46/160 (28.75%), Postives = 71/160 (44.38%), Query Frame = 0
BLAST of CaUC01G010340 vs. NCBI nr
Match: KAF5470601.1 (hypothetical protein F2P56_011105 [Juglans regia]) HSP 1 Score: 68.6 bits (166), Expect = 8.0e-08 Identity = 51/208 (24.52%), Postives = 89/208 (42.79%), Query Frame = 0
BLAST of CaUC01G010340 vs. NCBI nr
Match: XP_006471930.1 (uncharacterized protein LOC102617744 [Citrus sinensis]) HSP 1 Score: 68.6 bits (166), Expect = 8.0e-08 Identity = 46/141 (32.62%), Postives = 67/141 (47.52%), Query Frame = 0
BLAST of CaUC01G010340 vs. ExPASy TrEMBL
Match: A0A803P8L6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 2.3e-08 Identity = 44/149 (29.53%), Postives = 72/149 (48.32%), Query Frame = 0
BLAST of CaUC01G010340 vs. ExPASy TrEMBL
Match: A0A7J6EAV9 (RNase H domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_015240 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 3.9e-08 Identity = 39/124 (31.45%), Postives = 63/124 (50.81%), Query Frame = 0
BLAST of CaUC01G010340 vs. ExPASy TrEMBL
Match: A0A7J6HHY1 (RNase H domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_002761 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 6.6e-08 Identity = 38/146 (26.03%), Postives = 71/146 (48.63%), Query Frame = 0
BLAST of CaUC01G010340 vs. ExPASy TrEMBL
Match: A0A7J6I0M5 (RNase H domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_023029 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 6.6e-08 Identity = 38/146 (26.03%), Postives = 71/146 (48.63%), Query Frame = 0
BLAST of CaUC01G010340 vs. ExPASy TrEMBL
Match: A0A803PF28 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 8.6e-08 Identity = 38/137 (27.74%), Postives = 64/137 (46.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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