CaUC01G000970 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G000970
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	F-box protein
Location	Ciama_Chr01: 727692 .. 731048 (+)
RNA-Seq Expression	CaUC01G000970
Synteny	CaUC01G000970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGATCCATTACAGAGATACCAAAATCTTGCCCTAACAGACTCTCTGGCGAAGAGTTACACCTACCCATTAGCTTGTAAGGAGCTAAGCTTCTTAATCAGAGGCGCTTTCAATAAACTTCCCAAGAATCTCCAATCCCTCATCTACCAACATATTATCACCGCCTTTCATCTCCTCCCGGAGTAAGTCTTCTGTTTGTCCCCTTCTTTCAATTTCTTTTCTTTCTGTTCATTTTTACAAGAAATTATGGATTCGTTTGGTATTTTGTTTTTTGGGTATCAAGAAATTAGAGAAAATTCGGTTCGTTTTTGGTTATGTTTGAAATTCAGTGATTTAGAATTGATATGCTGAGTACCCACGTAGTTTGTCAGTTTCGATTCTCCATGTTCGAATCTAATTAGGAAATGTTATGAACTGTTTGAATGTTTGATTTGGCCATTTGGGAATTGTTCTATTCACTTCATCGATTATAAAAAAGGTTCTTTTAAATCCTTTGCCTGTGCCTGGTTGATTATTGTACATTACTTATTCATTTGTCACATCTGTCATTTTGCTGTCTTCTGCTCAAGCTTGTCTTTTTAGCTACTTCTTCAATAGTCTTCACTTTCTTTCTTGGAGAAGAGTGAGCATCTGTCCCGTTATCAATGGAATAGCTTCCCTTTTAAGGATTCTATCGAATAGTTGGTTGAATGCCTTAATAAACACATTTAGCATCAACTTTAAATGAAGAGTACCATAAATTTGTCTGTCATAAACCAATTTTTCTCTTTAATTACTTCAGCGAGAAAAAAGGATATGCAATCTAGTTAATGTTTTGTTTATCTAAGAACGTAGTTGTGTACACTGTCGATTCCATCTTATGACATTGAAACTGAGCTTAGCTACTATATTTATCTGTATTGTCTGTGAATTTCTTCTTCTTTCCTCTCTCTTATTTATATACATTCTGTCAAGGCTTATTAGAAAATGGGAAGTTTAATATGAAATCAATATGAAATTTTCTGATTAAGGTGTGGTTGATTTAACAAAAGAATGCAGACCAGCTCTGCTGCTTCGGCTGCACATCTCCTTGCTCAGGGTGTTGAAGCTGCTTTGCCTAAGCAAAAGAGAAATTCAGCGATAGTAGAATTTAAGAAAGCAATGGTTGCTCATAAGAGGCGTAGTAAAGCACATCAGGAAGAAAAAGGTGAATTATTTGTAAGATTGGTTTAACTTCTTTGCCCCCTTCTTTCTGGGGTATATGCTATTTATACATCAAATTGAACATATTTTTCATGTTTTGCAACTCAATCTGATTGCTAATCACAATTTCTTTTAGGTTCTGCTCAACTCCCTCAAGACGTTCTCCTCCACATCTTCCGCTTTCTAGATGTTCAATCTTTAGTTTCAGCTGGGCTAGTATGCCGGTAATTTGCTGTCATGATATTTCCTTATCTATCTTGTTATTACCTTAAAGCTCTGCTATTGAACTATTCAACTTAGTTTACTAGGATTTTAAGTTCACAAGCATAGCTAATGGTAATTGCTTCCTTTTAAAATAATGGTCATTATGTACTCAATGTGAAGGTCGTGGAATGTAGCAGCAGATGATGAATATTTGTGGCAGTTGCAGTATACAACATTTTTTGGTTGTTCTGATGACAACAGTAAACCCATTAATGATAAAGACAGTGTGGATGACTTTGCTACCGCACCTCATGTTGATTGGAAAGAGGAATTCAAGAGAGCATATGTAGGTGAGAATTGAGACGGTCTCCAAATTCTGAACAATATATATACACATTTATGGTTTGGTTAGATTTCCCTGCCATTAAGTGATTAACTTAAATTTAAGAAAAATACTATCCATGTAGCTTGTAGTTAGAAATATTATTATGGTATCAAAGGCATATTAGTATATAGCCAAGGAATTTGTTAGTGAGAGTTGATCATAAATAAAGTTGGTGGGAGAAGAGGAGGGTAGACAATTGTTTCTTGGGTTTAGGCTGAAGTGAGATTACTCGAGTGGGAGGTTCAAATACAGTGGGAATTGTTGTATTCCTTTATCTTTTTATCTTTCAGTGTTATTCTACTTATTGTCACTGATTTTCTTAATATAACAAAATTTTCATAAGATGGTTTTGAATTTCATATGGCATTTGGAATGATAGGTAATTCTTTGGGGAGAAACACATATGGAAGGGGATACTGCAAACACTGTGACACAATAGTTTCCTTTAGTACCTTGAGATGTCCCAACGATCATGGTAGAAATAAAAATAAACTAATCAAGCCTTTGTCAATCAACCAGGTACTTTTTTCTATCCCTTTTTCCTAAGTTCATTTTCAGGGTCTTTTAGGTCAGCTTTCACTCTTCGACTATCTTACTCTAGTTATATGAATCTCTCTCTGTCTCTCTCTCTCTCTCTCTAGCTCTGAACACAATTGTAGTTTTTCTATTCCCTCCACCTCACTGAAATAAAACTGCTTCTGCTCATTTGAATGGTCACTTTTTATGAAACTGACTTCTTTTCAGGCTGATGGTAGTATGGCTTTTTTTGCTATTGATTCTTTTAGAGGGGAAAAACAAGGCCATGTTCTTTTAAAAGTATCTATAGAGATTTTATAGCTGCTTTTAAGTTTTTCAAGAATGCTTTTTTATGTAGGGCTGTAAGTAGGTTGATTGGGGAGTCATTTCATTGTCCAAAACTGATTCTGAATTGGCCCATCAATTCAAGAAACATTAAAACTAGATGCTGAAACCAGTATTGGTTAAGTTATAAAAGTACACATATTCTTGAATTTTGCCATTTTGTTAAAAAAAAAAACCCCAACCTCTATTTGTTCTTTCATGAGCCTTGAGTAGAAATCCTTAAGAATTTCATATGAAATTTGGTTGCGGCTTGGAATGATGTAGTAGTGGTGGCCTAGAATGAAATTAGTTTGTCATATTGTTCCAGGTCCCAATTTTTGTGCGAAATTATGAAAGATTGCTACAACAACGGTGGTTTTGAAAGTTTTGTGAAAAATTAAGGATAATATTGCAACTTTTGAAAAAATAATAGTGTTCTTGAAACAAAAGGGTTCATGGTATATTTTATAATTTACCCCCAGTGTTTTTAAAAACAGAAGGGACAATCTGACGAAACTCCACAAAAGAAACAACCAAATGATAGAAAAAAACTAACTGAAATATTTTTGGCTTTTGCTTTTGAACTAATCATGATGTGTATTTTCTTGTAGGTTGTTGAATATGTGTTAAATGGATCTTCAGAATTGATTTATTCTTCAGATAGTGAAACTGATTCAGATGAAGTTGTGATTTCTGAGTTTTGGGCTCTTCCAAAGTACTTGGGCAGTAGGCTTCCGAACTGA

mRNA sequence

ATGTCGGATCCATTACAGAGATACCAAAATCTTGCCCTAACAGACTCTCTGGCGAAGAGTTACACCTACCCATTAGCTTGTAAGGAGCTAAGCTTCTTAATCAGAGGCGCTTTCAATAAACTTCCCAAGAATCTCCAATCCCTCATCTACCAACATATTATCACCGCCTTTCATCTCCTCCCGGAAATGCAGACCAGCTCTGCTGCTTCGGCTGCACATCTCCTTGCTCAGGGTGTTGAAGCTGCTTTGCCTAAGCAAAAGAGAAATTCAGCGATAGTAGAATTTAAGAAAGCAATGGTTGCTCATAAGAGGCGTAGTAAAGCACATCAGGAAGAAAAAGGTTCTGCTCAACTCCCTCAAGACGTTCTCCTCCACATCTTCCGCTTTCTAGATGTTCAATCTTTAGTTTCAGCTGGGCTAGTATGCCGGTCGTGGAATGTAGCAGCAGATGATGAATATTTGTGGCAGTTGCAGTATACAACATTTTTTGGTTGTTCTGATGACAACAGTAAACCCATTAATGATAAAGACAGTGTGGATGACTTTGCTACCGCACCTCATGTTGATTGGAAAGAGGAATTCAAGAGAGCATATGTAGGTAATTCTTTGGGGAGAAACACATATGGAAGGGGATACTGCAAACACTGTGACACAATAGTTTCCTTTAGTACCTTGAGATGTCCCAACGATCATGGTAGAAATAAAAATAAACTAATCAAGCCTTTGTCAATCAACCAGGTTGTTGAATATGTGTTAAATGGATCTTCAGAATTGATTTATTCTTCAGATAGTGAAACTGATTCAGATGAAGTTGTGATTTCTGAGTTTTGGGCTCTTCCAAAGTACTTGGGCAGTAGGCTTCCGAACTGA

Coding sequence (CDS)

ATGTCGGATCCATTACAGAGATACCAAAATCTTGCCCTAACAGACTCTCTGGCGAAGAGTTACACCTACCCATTAGCTTGTAAGGAGCTAAGCTTCTTAATCAGAGGCGCTTTCAATAAACTTCCCAAGAATCTCCAATCCCTCATCTACCAACATATTATCACCGCCTTTCATCTCCTCCCGGAAATGCAGACCAGCTCTGCTGCTTCGGCTGCACATCTCCTTGCTCAGGGTGTTGAAGCTGCTTTGCCTAAGCAAAAGAGAAATTCAGCGATAGTAGAATTTAAGAAAGCAATGGTTGCTCATAAGAGGCGTAGTAAAGCACATCAGGAAGAAAAAGGTTCTGCTCAACTCCCTCAAGACGTTCTCCTCCACATCTTCCGCTTTCTAGATGTTCAATCTTTAGTTTCAGCTGGGCTAGTATGCCGGTCGTGGAATGTAGCAGCAGATGATGAATATTTGTGGCAGTTGCAGTATACAACATTTTTTGGTTGTTCTGATGACAACAGTAAACCCATTAATGATAAAGACAGTGTGGATGACTTTGCTACCGCACCTCATGTTGATTGGAAAGAGGAATTCAAGAGAGCATATGTAGGTAATTCTTTGGGGAGAAACACATATGGAAGGGGATACTGCAAACACTGTGACACAATAGTTTCCTTTAGTACCTTGAGATGTCCCAACGATCATGGTAGAAATAAAAATAAACTAATCAAGCCTTTGTCAATCAACCAGGTTGTTGAATATGTGTTAAATGGATCTTCAGAATTGATTTATTCTTCAGATAGTGAAACTGATTCAGATGAAGTTGTGATTTCTGAGTTTTGGGCTCTTCCAAAGTACTTGGGCAGTAGGCTTCCGAACTGA

Protein sequence

MSDPLQRYQNLALTDSLAKSYTYPLACKELSFLIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAASAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSAQLPQDVLLHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYTTFFGCSDDNSKPINDKDSVDDFATAPHVDWKEEFKRAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKLIKPLSINQVVEYVLNGSSELIYSSDSETDSDEVVISEFWALPKYLGSRLPN

Homology

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BLAST of CaUC01G000970 vs. NCBI nr
Match: XP_038874449.1 (F-box protein At5g52880 isoform X1 [Benincasa hispida])

HSP 1 Score: 550.1 bits (1416), Expect = 1.2e-152
Identity = 273/289 (94.46%), Postives = 279/289 (96.54%), Query Frame = 0


Query: 1   MSDPLQRYQNLALTDSLAKSYTYPLACKELSFLIRGAFNKLPKNLQSLIYQHIITAFHLL 60
           MSDPL+RYQNLALTDSLAKSY+YPLACKELSFLIRGAFNKLPKNLQSLIYQHIITAFHLL
Sbjct: 1   MSDPLERYQNLALTDSLAKSYSYPLACKELSFLIRGAFNKLPKNLQSLIYQHIITAFHLL 60

Query: 61  PEMQTSSAASAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSAQLPQ 120
           PEMQTSSAASAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSAQLPQ
Sbjct: 61  PEMQTSSAASAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSAQLPQ 120

Query: 121 DVLLHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYTTFFGCSDDNSKPINDKDSVD 180
           DVLLHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYT FFGCSDDNSKPINDKDSVD
Sbjct: 121 DVLLHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYTKFFGCSDDNSKPINDKDSVD 180

Query: 181 DFATAPHVDWKEEFKRAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKLIK 240
           DFA+A HVDWKEEFK AY+ NSL RNT GRGYC+HCDTIVS STLRCPNDHGRNKNK IK
Sbjct: 181 DFASARHVDWKEEFKSAYIVNSLRRNTNGRGYCRHCDTIVSSSTLRCPNDHGRNKNKQIK 240

Query: 241 PLSINQVVEYVLNGSSELIYSSDSETDSDEVVISEFWALPKYLGSRLPN 290
           PLSINQVVEYVLNGS+ELIYSSDSETDSDEVVISEFWA PKYLGSR PN
Sbjct: 241 PLSINQVVEYVLNGSTELIYSSDSETDSDEVVISEFWAFPKYLGSRRPN 289

[Close]

BLAST of CaUC01G000970 vs. NCBI nr
Match: XP_008437544.1 (PREDICTED: F-box protein At5g52880 isoform X1 [Cucumis melo])

HSP 1 Score: 521.5 bits (1342), Expect = 4.5e-144
Identity = 261/288 (90.62%), Postives = 269/288 (93.40%), Query Frame = 0


Query: 1   MSDPLQRYQNLALTDSLAKSYTYPLACKELSFLIRGAFNKLPKNLQSLIYQHIITAFHLL 60
           MS+PL+RY  L+L DSL KSY+YPLACKELSFLIRGAF KLPKNLQSLIYQHIITAFHLL
Sbjct: 1   MSNPLERYHKLSLIDSLGKSYSYPLACKELSFLIRGAFIKLPKNLQSLIYQHIITAFHLL 60

Query: 61  PEMQTSSAASAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSAQLPQ 120
           PEMQTSSAASAA LLAQ VEAALPKQKRNS IVE+KKAMV HKRRSKAHQEEKGS QLPQ
Sbjct: 61  PEMQTSSAASAARLLAQAVEAALPKQKRNSVIVEYKKAMVVHKRRSKAHQEEKGSCQLPQ 120

Query: 121 DVLLHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYTTFFGCSDDNSKPINDKDSVD 180
           DVLLHIFRFLDVQSL SAGLVCRSWNVAADDEYLWQLQYTTFFGC DDNSKPINDKDS D
Sbjct: 121 DVLLHIFRFLDVQSLGSAGLVCRSWNVAADDEYLWQLQYTTFFGCPDDNSKPINDKDSED 180

Query: 181 DFATA--PHVDWKEEFKRAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKL 240
           DFA++  PHVDWKEEFK+AYVGNSLGRNT GRGYCKHCDTIVSFSTLRC NDHGRNKNK 
Sbjct: 181 DFASSSTPHVDWKEEFKKAYVGNSLGRNTCGRGYCKHCDTIVSFSTLRCTNDHGRNKNKQ 240

Query: 241 IKPLSINQVVEYVLNGSSELIYSSDSETDSDEVVISEFWALPKYLGSR 287
           IKPLSINQVVEYVLNGSSELIYSSDSETDSDE VISEFWALPKYLGSR
Sbjct: 241 IKPLSINQVVEYVLNGSSELIYSSDSETDSDEDVISEFWALPKYLGSR 288

[Close]

BLAST of CaUC01G000970 vs. NCBI nr
Match: XP_022973056.1 (F-box protein At5g52880 isoform X1 [Cucurbita maxima])

HSP 1 Score: 518.8 bits (1335), Expect = 2.9e-143
Identity = 255/289 (88.24%), Postives = 270/289 (93.43%), Query Frame = 0


Query: 1   MSDPLQRYQNLALTDSLAKSYTYPLACKELSFLIRGAFNKLPKNLQSLIYQHIITAFHLL 60
           M+DPL+RYQNLALTDSLAKSY+YPLACKELSF+ RGAFNKLPKNLQSLI+QHIITAFHLL
Sbjct: 1   MTDPLERYQNLALTDSLAKSYSYPLACKELSFITRGAFNKLPKNLQSLIFQHIITAFHLL 60

Query: 61  PEMQTSSAASAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSAQLPQ 120
           PEMQTSSA SAAHLLAQGVEA+LPKQKRNSAIVEFKKAMVAHKRRSKA QE KGS+QLPQ
Sbjct: 61  PEMQTSSAVSAAHLLAQGVEASLPKQKRNSAIVEFKKAMVAHKRRSKARQEVKGSSQLPQ 120

Query: 121 DVLLHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYTTFFGCSDDNSKPINDKDSVD 180
           DVLLHIFRFLD++SLVSAGLVCRSW+ AADDEYLWQ QYTTFFGCSD+   PIND+DSVD
Sbjct: 121 DVLLHIFRFLDIESLVSAGLVCRSWSAAADDEYLWQFQYTTFFGCSDE---PINDEDSVD 180

Query: 181 DFATAPHVDWKEEFKRAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKLIK 240
             A+ PHVDWKE FKRAYVGNSL RN YGRGYCKHCDTIVSFSTLRCPNDHGRNKN+ IK
Sbjct: 181 GLASTPHVDWKEAFKRAYVGNSLWRNRYGRGYCKHCDTIVSFSTLRCPNDHGRNKNRQIK 240

Query: 241 PLSINQVVEYVLNGSSELIYSSDSETDSDEVVISEFWALPKYLGSRLPN 290
           PLSINQVVEYVLNG SELIYSSDS+TDSDEVVISEFWALPKYLG R PN
Sbjct: 241 PLSINQVVEYVLNGISELIYSSDSDTDSDEVVISEFWALPKYLGRRRPN 286

[Close]

BLAST of CaUC01G000970 vs. NCBI nr
Match: XP_022922152.1 (F-box protein At5g52880 isoform X1 [Cucurbita moschata])

HSP 1 Score: 516.2 bits (1328), Expect = 1.9e-142
Identity = 255/289 (88.24%), Postives = 268/289 (92.73%), Query Frame = 0


Query: 1   MSDPLQRYQNLALTDSLAKSYTYPLACKELSFLIRGAFNKLPKNLQSLIYQHIITAFHLL 60
           M+DPL+RYQNLALTDSLAKSY+YPLACKELSF+ RGAFNKLPKNLQSLI+QHIITAFHLL
Sbjct: 1   MTDPLERYQNLALTDSLAKSYSYPLACKELSFITRGAFNKLPKNLQSLIFQHIITAFHLL 60

Query: 61  PEMQTSSAASAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSAQLPQ 120
           PEMQTSSA SAAHLLAQGVEA+LPKQKRNSAIVEFKKAMVAHKRRSKA QE KGS+QLPQ
Sbjct: 61  PEMQTSSAVSAAHLLAQGVEASLPKQKRNSAIVEFKKAMVAHKRRSKARQEVKGSSQLPQ 120

Query: 121 DVLLHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYTTFFGCSDDNSKPINDKDSVD 180
           DVLLHIFRFLD++SLVSAGLVCRSWN AADDEYLWQ QYTTFFGCSD+   PINDKDSVD
Sbjct: 121 DVLLHIFRFLDIESLVSAGLVCRSWNAAADDEYLWQFQYTTFFGCSDE---PINDKDSVD 180

Query: 181 DFATAPHVDWKEEFKRAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKLIK 240
             A+ PHVDWKE FK AYVGNSL RN  GRGYCKHCDTIVSFSTLRCPNDHGRNKNK IK
Sbjct: 181 GLASTPHVDWKEAFKGAYVGNSLWRNRSGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIK 240

Query: 241 PLSINQVVEYVLNGSSELIYSSDSETDSDEVVISEFWALPKYLGSRLPN 290
           PLSINQVVEYVL G+SELIYSSDS+TDSDEVVISEFWALPKYLG R PN
Sbjct: 241 PLSINQVVEYVLTGTSELIYSSDSDTDSDEVVISEFWALPKYLGRRRPN 286

[Close]

BLAST of CaUC01G000970 vs. NCBI nr
Match: KAG7016844.1 (SPCC24B10.10c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 516.2 bits (1328), Expect = 1.9e-142
Identity = 255/289 (88.24%), Postives = 268/289 (92.73%), Query Frame = 0


Query: 1    MSDPLQRYQNLALTDSLAKSYTYPLACKELSFLIRGAFNKLPKNLQSLIYQHIITAFHLL 60
            M+DPL+RYQNLALTDSLAKSY+YPLACKELSF+ RGAFNKLPKNLQSLI+QHIITAFHLL
Sbjct: 825  MTDPLERYQNLALTDSLAKSYSYPLACKELSFITRGAFNKLPKNLQSLIFQHIITAFHLL 884

Query: 61   PEMQTSSAASAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSAQLPQ 120
            PEMQTSSA SAAHLLAQGVEA+LPKQKRNSAIVEFKKAMVAHKRRSKA QE KGS+QLPQ
Sbjct: 885  PEMQTSSAVSAAHLLAQGVEASLPKQKRNSAIVEFKKAMVAHKRRSKARQEVKGSSQLPQ 944

Query: 121  DVLLHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYTTFFGCSDDNSKPINDKDSVD 180
            DVLLHIFRFLD++SLVSAGLVCRSWN AADDEYLWQ QYTTFFGCSD+   PINDKDSVD
Sbjct: 945  DVLLHIFRFLDIESLVSAGLVCRSWNAAADDEYLWQFQYTTFFGCSDE---PINDKDSVD 1004

Query: 181  DFATAPHVDWKEEFKRAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKLIK 240
              A+ PHVDWKE FK AYVGNSL RN  GRGYCKHCDTIVSFSTLRCPNDHGRNKNK IK
Sbjct: 1005 GLASTPHVDWKEAFKGAYVGNSLWRNRSGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIK 1064

Query: 241  PLSINQVVEYVLNGSSELIYSSDSETDSDEVVISEFWALPKYLGSRLPN 290
            PLSINQVVEYVL G+SELIYSSDS+TDSDEVVISEFWALPKYLG R PN
Sbjct: 1065 PLSINQVVEYVLTGTSELIYSSDSDTDSDEVVISEFWALPKYLGRRRPN 1110

[Close]

BLAST of CaUC01G000970 vs. ExPASy Swiss-Prot
Match: Q9FLX3 (F-box protein At5g52880 OS=Arabidopsis thaliana OX=3702 GN=At5g52880 PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.0e-54
Identity = 130/287 (45.30%), Postives = 176/287 (61.32%), Query Frame = 0


Query: 5   LQRYQNLALTDSLAKSYTYPLACKELSFLIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQ 64
           ++RYQNL + ++ +K+  YP AC ELS ++  A++  PKN+++LI+Q  ++AF LLP++ 
Sbjct: 1   MKRYQNLKVGEAFSKNRIYPFACNELSSILNLAYSLSPKNVKALIFQDTLSAFRLLPDIN 60

Query: 65  TSSAASAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEK-GSAQLPQDVL 124
           TS+A SAA+LL + VEA LPKQK+N AIVEFK+A VA KRRSK  +EE      LPQD+L
Sbjct: 61  TSAAVSAANLLLKSVEAVLPKQKKNLAIVEFKQAKVALKRRSKNREEEDIDIPSLPQDIL 120

Query: 125 LHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYTTFFGCSDDNSKPINDKDSVDDFA 184
           +HIF FL++ SLVS+  V RSWN A  +  LWQ Q+   F     N K +    S     
Sbjct: 121 IHIFSFLEISSLVSSAQVSRSWNQATHENSLWQSQFDLHF-----NHKVLIRMQS----- 180

Query: 185 TAPHVDWKEEFKRAYV-GNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNK--NKLIK 244
               +DW+E FK+AY+  NS      GRGYC +CD+IV    LRC N   R K  NK + 
Sbjct: 181 ---DIDWREAFKKAYIAANSSEALRSGRGYCSYCDSIVWHENLRCLNKQCRLKSGNKPLD 240

Query: 245 PLSINQVVEYVLNGSSELIYSSDSETDS-DEVVISEFWAL---PKYL 284
            ++ +QVV Y+L      I SSD E++S DE      W L   P YL
Sbjct: 241 LITTHQVVNYLLG-----IESSDDESESDDEAFPGRLWKLSYVPDYL 269

[Close]

BLAST of CaUC01G000970 vs. ExPASy Swiss-Prot
Match: Q5UPK8 (Putative F-box protein L127 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_L127 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.3e-05
Identity = 25/57 (43.86%), Postives = 34/57 (59.65%), Query Frame = 0


Query: 118 LPQDVLLHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYTTFFGCSDDNSKPIN 175
           L ++++ HIF FLD+ S +    VCR W   +DDE LW L Y  FFG     +KPI+
Sbjct: 5   LSEEMVYHIFCFLDLSSFIKCSRVCRKWRRISDDEKLWNL-YGEFFG----TNKPID 56

[Close]

BLAST of CaUC01G000970 vs. ExPASy Swiss-Prot
Match: Q969U6 (F-box/WD repeat-containing protein 5 OS=Homo sapiens OX=9606 GN=FBXW5 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.7e-05
Identity = 26/88 (29.55%), Postives = 43/88 (48.86%), Query Frame = 0


Query: 111 EEKGSAQLPQDVLLHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYTTFFGCSDDNS 170
           +E G+  LP  ++  IF  L    +++AGLVCR W   + DE+LW+ Q+  ++  + D  
Sbjct: 2   DEGGTPLLPDSLVYQIFLSLGPADVLAAGLVCRQWQAVSRDEFLWREQFYRYYQVARDVP 61

Query: 171 KPINDKDSVDDFATAPHVDWKEEFKRAY 199
           +                + W EEF+R Y
Sbjct: 62  R------------HPAAMSWYEEFQRLY 77

[Close]

BLAST of CaUC01G000970 vs. ExPASy Swiss-Prot
Match: Q4KLI9 (F-box/WD repeat-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Fbxw5 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.9e-05
Identity = 28/88 (31.82%), Postives = 44/88 (50.00%), Query Frame = 0


Query: 111 EEKGSAQLPQDVLLHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYTTFFGCSDDNS 170
           +E G   LP  ++  IF  L    +++AGLVCR W   + DE+LW+ Q+  ++  + D  
Sbjct: 2   DEGGMPLLPDSLVYQIFLSLGPADVLAAGLVCRQWQAVSRDEFLWREQFYRYYQVARDVP 61

Query: 171 KPINDKDSVDDFATAPHVDWKEEFKRAY 199
           +           AT+    W EEF+R Y
Sbjct: 62  R--------HPAATS----WYEEFRRLY 77

[Close]

BLAST of CaUC01G000970 vs. ExPASy Swiss-Prot
Match: Q9QXW2 (F-box/WD repeat-containing protein 5 OS=Mus musculus OX=10090 GN=Fbxw5 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.8e-05
Identity = 28/88 (31.82%), Postives = 44/88 (50.00%), Query Frame = 0


Query: 111 EEKGSAQLPQDVLLHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYTTFFGCSDDNS 170
           +E G   LP  ++  IF  L    +++AGLVCR W   + DE+LW+ Q+  ++  + D  
Sbjct: 2   DEGGLPLLPDSLVYQIFLSLGPADVLAAGLVCRQWQAVSRDEFLWKEQFYRYYQVARDVP 61

Query: 171 KPINDKDSVDDFATAPHVDWKEEFKRAY 199
           +           AT+    W EEF+R Y
Sbjct: 62  R--------HPAATS----WYEEFRRLY 77

[Close]

BLAST of CaUC01G000970 vs. ExPASy TrEMBL
Match: A0A1S3AUV1 (F-box protein At5g52880 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482926 PE=4 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 2.2e-144
Identity = 261/288 (90.62%), Postives = 269/288 (93.40%), Query Frame = 0


Query: 1   MSDPLQRYQNLALTDSLAKSYTYPLACKELSFLIRGAFNKLPKNLQSLIYQHIITAFHLL 60
           MS+PL+RY  L+L DSL KSY+YPLACKELSFLIRGAF KLPKNLQSLIYQHIITAFHLL
Sbjct: 1   MSNPLERYHKLSLIDSLGKSYSYPLACKELSFLIRGAFIKLPKNLQSLIYQHIITAFHLL 60

Query: 61  PEMQTSSAASAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSAQLPQ 120
           PEMQTSSAASAA LLAQ VEAALPKQKRNS IVE+KKAMV HKRRSKAHQEEKGS QLPQ
Sbjct: 61  PEMQTSSAASAARLLAQAVEAALPKQKRNSVIVEYKKAMVVHKRRSKAHQEEKGSCQLPQ 120

Query: 121 DVLLHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYTTFFGCSDDNSKPINDKDSVD 180
           DVLLHIFRFLDVQSL SAGLVCRSWNVAADDEYLWQLQYTTFFGC DDNSKPINDKDS D
Sbjct: 121 DVLLHIFRFLDVQSLGSAGLVCRSWNVAADDEYLWQLQYTTFFGCPDDNSKPINDKDSED 180

Query: 181 DFATA--PHVDWKEEFKRAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKL 240
           DFA++  PHVDWKEEFK+AYVGNSLGRNT GRGYCKHCDTIVSFSTLRC NDHGRNKNK 
Sbjct: 181 DFASSSTPHVDWKEEFKKAYVGNSLGRNTCGRGYCKHCDTIVSFSTLRCTNDHGRNKNKQ 240

Query: 241 IKPLSINQVVEYVLNGSSELIYSSDSETDSDEVVISEFWALPKYLGSR 287
           IKPLSINQVVEYVLNGSSELIYSSDSETDSDE VISEFWALPKYLGSR
Sbjct: 241 IKPLSINQVVEYVLNGSSELIYSSDSETDSDEDVISEFWALPKYLGSR 288

[Close]

BLAST of CaUC01G000970 vs. ExPASy TrEMBL
Match: A0A6J1I7M6 (F-box protein At5g52880 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471558 PE=4 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.4e-143
Identity = 255/289 (88.24%), Postives = 270/289 (93.43%), Query Frame = 0


Query: 1   MSDPLQRYQNLALTDSLAKSYTYPLACKELSFLIRGAFNKLPKNLQSLIYQHIITAFHLL 60
           M+DPL+RYQNLALTDSLAKSY+YPLACKELSF+ RGAFNKLPKNLQSLI+QHIITAFHLL
Sbjct: 1   MTDPLERYQNLALTDSLAKSYSYPLACKELSFITRGAFNKLPKNLQSLIFQHIITAFHLL 60

Query: 61  PEMQTSSAASAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSAQLPQ 120
           PEMQTSSA SAAHLLAQGVEA+LPKQKRNSAIVEFKKAMVAHKRRSKA QE KGS+QLPQ
Sbjct: 61  PEMQTSSAVSAAHLLAQGVEASLPKQKRNSAIVEFKKAMVAHKRRSKARQEVKGSSQLPQ 120

Query: 121 DVLLHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYTTFFGCSDDNSKPINDKDSVD 180
           DVLLHIFRFLD++SLVSAGLVCRSW+ AADDEYLWQ QYTTFFGCSD+   PIND+DSVD
Sbjct: 121 DVLLHIFRFLDIESLVSAGLVCRSWSAAADDEYLWQFQYTTFFGCSDE---PINDEDSVD 180

Query: 181 DFATAPHVDWKEEFKRAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKLIK 240
             A+ PHVDWKE FKRAYVGNSL RN YGRGYCKHCDTIVSFSTLRCPNDHGRNKN+ IK
Sbjct: 181 GLASTPHVDWKEAFKRAYVGNSLWRNRYGRGYCKHCDTIVSFSTLRCPNDHGRNKNRQIK 240

Query: 241 PLSINQVVEYVLNGSSELIYSSDSETDSDEVVISEFWALPKYLGSRLPN 290
           PLSINQVVEYVLNG SELIYSSDS+TDSDEVVISEFWALPKYLG R PN
Sbjct: 241 PLSINQVVEYVLNGISELIYSSDSDTDSDEVVISEFWALPKYLGRRRPN 286

[Close]

BLAST of CaUC01G000970 vs. ExPASy TrEMBL
Match: A0A6J1E2E9 (F-box protein At5g52880 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430216 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 9.1e-143
Identity = 255/289 (88.24%), Postives = 268/289 (92.73%), Query Frame = 0


Query: 1   MSDPLQRYQNLALTDSLAKSYTYPLACKELSFLIRGAFNKLPKNLQSLIYQHIITAFHLL 60
           M+DPL+RYQNLALTDSLAKSY+YPLACKELSF+ RGAFNKLPKNLQSLI+QHIITAFHLL
Sbjct: 1   MTDPLERYQNLALTDSLAKSYSYPLACKELSFITRGAFNKLPKNLQSLIFQHIITAFHLL 60

Query: 61  PEMQTSSAASAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSAQLPQ 120
           PEMQTSSA SAAHLLAQGVEA+LPKQKRNSAIVEFKKAMVAHKRRSKA QE KGS+QLPQ
Sbjct: 61  PEMQTSSAVSAAHLLAQGVEASLPKQKRNSAIVEFKKAMVAHKRRSKARQEVKGSSQLPQ 120

Query: 121 DVLLHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYTTFFGCSDDNSKPINDKDSVD 180
           DVLLHIFRFLD++SLVSAGLVCRSWN AADDEYLWQ QYTTFFGCSD+   PINDKDSVD
Sbjct: 121 DVLLHIFRFLDIESLVSAGLVCRSWNAAADDEYLWQFQYTTFFGCSDE---PINDKDSVD 180

Query: 181 DFATAPHVDWKEEFKRAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKLIK 240
             A+ PHVDWKE FK AYVGNSL RN  GRGYCKHCDTIVSFSTLRCPNDHGRNKNK IK
Sbjct: 181 GLASTPHVDWKEAFKGAYVGNSLWRNRSGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIK 240

Query: 241 PLSINQVVEYVLNGSSELIYSSDSETDSDEVVISEFWALPKYLGSRLPN 290
           PLSINQVVEYVL G+SELIYSSDS+TDSDEVVISEFWALPKYLG R PN
Sbjct: 241 PLSINQVVEYVLTGTSELIYSSDSDTDSDEVVISEFWALPKYLGRRRPN 286

[Close]

BLAST of CaUC01G000970 vs. ExPASy TrEMBL
Match: A0A0A0KNE5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139890 PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 1.9e-140
Identity = 254/287 (88.50%), Postives = 266/287 (92.68%), Query Frame = 0


Query: 1   MSDPLQRYQNLALTDSLAKSYTYPLACKELSFLIRGAFNKLPKNLQSLIYQHIITAFHLL 60
           MS+PL+RY  L L D LAKSY+YPLACKELSFLIRGAF KLPKNLQSLIY+HIITAFHLL
Sbjct: 1   MSNPLERYHKLCLMDFLAKSYSYPLACKELSFLIRGAFIKLPKNLQSLIYEHIITAFHLL 60

Query: 61  PEMQTSSAASAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSAQLPQ 120
           PEMQTSSAASAA LLA+ VEAALPKQKRNS IVEFKKAMV HKRR+KAHQEEKGS QLPQ
Sbjct: 61  PEMQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQ 120

Query: 121 DVLLHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYTTFFGCSDDNSKPINDKDSVD 180
           DVLLHIFRF+DVQSLVSAGLVCRSWNVAA+DEYLWQLQYTTFF CSDDNSK INDKDS D
Sbjct: 121 DVLLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSED 180

Query: 181 DFATA--PHVDWKEEFKRAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKL 240
            FA++  P VDWKEEFK+AYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKN  
Sbjct: 181 GFASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQ 240

Query: 241 IKPLSINQVVEYVLNGSSELIYSSDSETDSDEVVISEFWALPKYLGS 286
           IKPLSINQVVEYVLNG+SELIYSSDSETDSDE VISEFWALPKYLGS
Sbjct: 241 IKPLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGS 287

[Close]

BLAST of CaUC01G000970 vs. ExPASy TrEMBL
Match: A0A1S3ATY4 (F-box protein At5g52880 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482926 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 6.1e-123
Identity = 223/253 (88.14%), Postives = 234/253 (92.49%), Query Frame = 0


Query: 1   MSDPLQRYQNLALTDSLAKSYTYPLACKELSFLIRGAFNKLPKNLQSLIYQHIITAFHLL 60
           MS+PL+RY  L+L DSL KSY+YPLACKELSFLIRGAF KLPKNLQSLIYQHIITAFHLL
Sbjct: 1   MSNPLERYHKLSLIDSLGKSYSYPLACKELSFLIRGAFIKLPKNLQSLIYQHIITAFHLL 60

Query: 61  PEMQTSSAASAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSAQLPQ 120
           PEMQTSSAASAA LLAQ VEAALPKQKRNS IVE+KKAMV HKRRSKAHQEEKGS QLPQ
Sbjct: 61  PEMQTSSAASAARLLAQAVEAALPKQKRNSVIVEYKKAMVVHKRRSKAHQEEKGSCQLPQ 120

Query: 121 DVLLHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYTTFFGCSDDNSKPINDKDSVD 180
           DVLLHIFRFLDVQSL SAGLVCRSWNVAADDEYLWQLQYTTFFGC DDNSKPINDKDS D
Sbjct: 121 DVLLHIFRFLDVQSLGSAGLVCRSWNVAADDEYLWQLQYTTFFGCPDDNSKPINDKDSED 180

Query: 181 DFATA--PHVDWKEEFKRAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKL 240
           DFA++  PHVDWKEEFK+AYVGNSLGRNT GRGYCKHCDTIVSFSTLRC NDHGRNKNK 
Sbjct: 181 DFASSSTPHVDWKEEFKKAYVGNSLGRNTCGRGYCKHCDTIVSFSTLRCTNDHGRNKNKQ 240

Query: 241 IKPLSINQVVEYV 252
           IKPLSINQ+V+ +
Sbjct: 241 IKPLSINQIVKLI 253

[Close]

BLAST of CaUC01G000970 vs. TAIR 10
Match: AT5G52880.1 (F-box family protein )

HSP 1 Score: 214.2 bits (544), Expect = 1.4e-55
Identity = 130/287 (45.30%), Postives = 176/287 (61.32%), Query Frame = 0


Query: 5   LQRYQNLALTDSLAKSYTYPLACKELSFLIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQ 64
           ++RYQNL + ++ +K+  YP AC ELS ++  A++  PKN+++LI+Q  ++AF LLP++ 
Sbjct: 1   MKRYQNLKVGEAFSKNRIYPFACNELSSILNLAYSLSPKNVKALIFQDTLSAFRLLPDIN 60

Query: 65  TSSAASAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEK-GSAQLPQDVL 124
           TS+A SAA+LL + VEA LPKQK+N AIVEFK+A VA KRRSK  +EE      LPQD+L
Sbjct: 61  TSAAVSAANLLLKSVEAVLPKQKKNLAIVEFKQAKVALKRRSKNREEEDIDIPSLPQDIL 120

Query: 125 LHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYTTFFGCSDDNSKPINDKDSVDDFA 184
           +HIF FL++ SLVS+  V RSWN A  +  LWQ Q+   F     N K +    S     
Sbjct: 121 IHIFSFLEISSLVSSAQVSRSWNQATHENSLWQSQFDLHF-----NHKVLIRMQS----- 180

Query: 185 TAPHVDWKEEFKRAYV-GNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNK--NKLIK 244
               +DW+E FK+AY+  NS      GRGYC +CD+IV    LRC N   R K  NK + 
Sbjct: 181 ---DIDWREAFKKAYIAANSSEALRSGRGYCSYCDSIVWHENLRCLNKQCRLKSGNKPLD 240

Query: 245 PLSINQVVEYVLNGSSELIYSSDSETDS-DEVVISEFWAL---PKYL 284
            ++ +QVV Y+L      I SSD E++S DE      W L   P YL
Sbjct: 241 LITTHQVVNYLLG-----IESSDDESESDDEAFPGRLWKLSYVPDYL 269

[Close]

BLAST of CaUC01G000970 vs. TAIR 10
Match: AT5G45360.1 (F-box family protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.5e-04
Identity = 24/64 (37.50%), Postives = 36/64 (56.25%), Query Frame = 0


Query: 102 HKRRSKAHQEEKG-SAQLPQDVLLHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYT 161
           +K ++ A + E G    +P ++  HI +FL  + LVS  LVC+  N AA DE LW+  Y 
Sbjct: 57  NKDKTDAKRIESGVFTNVPTELFRHILKFLSSEDLVSCSLVCKFLNFAAADESLWRRLYC 116

Query: 162 TFFG 165
             +G
Sbjct: 117 IRWG 120

The following BLAST results are available for this feature:

BLAST of CaUC01G000970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874449.1	1.2e-152	94.46	F-box protein At5g52880 isoform X1 [Benincasa hispida]	[more]
XP_008437544.1	4.5e-144	90.63	PREDICTED: F-box protein At5g52880 isoform X1 [Cucumis melo]	[more]
XP_022973056.1	2.9e-143	88.24	F-box protein At5g52880 isoform X1 [Cucurbita maxima]	[more]
XP_022922152.1	1.9e-142	88.24	F-box protein At5g52880 isoform X1 [Cucurbita moschata]	[more]
KAG7016844.1	1.9e-142	88.24	SPCC24B10.10c [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CaUC01G000970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLX3	2.0e-54	45.30	F-box protein At5g52880 OS=Arabidopsis thaliana OX=3702 GN=At5g52880 PE=2 SV=1	[more]
Q5UPK8	1.3e-05	43.86	Putative F-box protein L127 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIM...	[more]
Q969U6	1.7e-05	29.55	F-box/WD repeat-containing protein 5 OS=Homo sapiens OX=9606 GN=FBXW5 PE=1 SV=1	[more]
Q4KLI9	2.9e-05	31.82	F-box/WD repeat-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Fbxw5 PE=2...	[more]
Q9QXW2	3.8e-05	31.82	F-box/WD repeat-containing protein 5 OS=Mus musculus OX=10090 GN=Fbxw5 PE=1 SV=1	[more]

BLAST of CaUC01G000970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AUV1	2.2e-144	90.63	F-box protein At5g52880 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482926 PE=4 ...	[more]
A0A6J1I7M6	1.4e-143	88.24	F-box protein At5g52880 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471558 P...	[more]
A0A6J1E2E9	9.1e-143	88.24	F-box protein At5g52880 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430216...	[more]
A0A0A0KNE5	1.9e-140	88.50	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139890 PE=4 ...	[more]
A0A1S3ATY4	6.1e-123	88.14	F-box protein At5g52880 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482926 PE=4 ...	[more]

BLAST of CaUC01G000970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52880.1	1.4e-55	45.30	F-box family protein	[more]
AT5G45360.1	1.5e-04	37.50	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 118..158 e-value: 3.2E-9 score: 46.6
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 117..159 e-value: 7.0E-14 score: 51.5
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 112..158 score: 11.828977
None	No IPR available	GENE3D	1.20.1280.50		coord: 100..202 e-value: 3.2E-15 score: 57.8
None	No IPR available	PANTHER	PTHR47744	OS05G0526300 PROTEIN	coord: 1..283
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 116..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G000970.1	CaUC01G000970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding