CaUC01G000110 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G000110
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	60S acidic ribosomal protein P1
Location	Ciama_Chr01: 76847 .. 77335 (-)
RNA-Seq Expression	CaUC01G000110
Synteny	CaUC01G000110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTACCAGTGAACTCGCTTGCACCTACACCGCCTTGATTCTTCATGGCGACGCCATCTCCGTCGCTGTACCTATCAATATTCCTTTTTACCTCCTTCCATTTCTAACAACTCTCTTCTTCTTTCTTTCCATATTTTAATTTAGGCCGAGAAGATTTCCAAGTCGGTGAACGCTGCCGGCCTTACCGTCGAATCCTACTGGCCTTCTCTCTTTTCTCTCTCCATCTCATCTTCTGCCGGTAATGCCGCTCCTGCGCCCGTACTTGCCTAAATAACAAATAATTCAAAATTAGGATTATATAAGTTTATACATGATTTTAGATCGCTGAAAGCAATTGAGCCTATAGCTCCTTCTTACTGGAGCATATATATTATTGATTTTGATTTACGTATATTCCTGGTTATATATGGTTGTATTGTACCTGTATCATATGCAGGAAGAGGTGATGGAAGAGAGCGAGGATGAGATGGTCTTGGGCTTTGTTTGA

mRNA sequence

ATGTCTACCAGTGAACTCGCTTGCACCTACACCGCCTTGATTCTTCATGGCGACGCCATCTCCGTCGCTGCCGAGAAGATTTCCAAGTCGGTGAACGCTGCCGGCCTTACCGTCGAATCCTACTGGCCTTCTCTCTTTTCTCTCTCCATCTCATCTTCTGCCGGTAATGCCGCTCCTGCGCCCGAAGAGGTGATGGAAGAGAGCGAGGATGAGATGGTCTTGGGCTTTGTTTGA

Coding sequence (CDS)

ATGTCTACCAGTGAACTCGCTTGCACCTACACCGCCTTGATTCTTCATGGCGACGCCATCTCCGTCGCTGCCGAGAAGATTTCCAAGTCGGTGAACGCTGCCGGCCTTACCGTCGAATCCTACTGGCCTTCTCTCTTTTCTCTCTCCATCTCATCTTCTGCCGGTAATGCCGCTCCTGCGCCCGAAGAGGTGATGGAAGAGAGCGAGGATGAGATGGTCTTGGGCTTTGTTTGA

Protein sequence

MSTSELACTYTALILHGDAISVAAEKISKSVNAAGLTVESYWPSLFSLSISSSAGNAAPAPEEVMEESEDEMVLGFV

Homology

[Close]

BLAST of CaUC01G000110 vs. NCBI nr
Match: XP_022138164.1 (60S acidic ribosomal protein P1-like isoform X2 [Momordica charantia])

HSP 1 Score: 86.3 bits (212), Expect = 1.3e-13
Identity = 58/109 (53.21%), Postives = 65/109 (59.63%), Query Frame = 0


Query: 1   MSTSELACTYTALILHGDAISVAAEKISKSVNAAGLTVESYWPSLF-------------- 60
           MSTSELACTY ALILH DAISV AEKI+  V AAGLTVESYWPSLF              
Sbjct: 1   MSTSELACTYAALILHDDAISVTAEKIATLVKAAGLTVESYWPSLFAKLSSKRNIDDLIL 60

Query: 61  -----------SLSISSSA-GNAAPAP--------EEVMEESEDEMVLG 76
                      S++ SSSA  +AAPAP        EE +EESED++V G
Sbjct: 61  NVGSAAASAPLSMASSSSADASAAPAPAPAPVEKKEEAVEESEDDLVFG 109

[Close]

BLAST of CaUC01G000110 vs. NCBI nr
Match: XP_022138163.1 (60S acidic ribosomal protein P1-like isoform X1 [Momordica charantia])

HSP 1 Score: 79.7 bits (195), Expect = 1.2e-11
Identity = 54/105 (51.43%), Postives = 61/105 (58.10%), Query Frame = 0


Query: 5   ELACTYTALILHGDAISVAAEKISKSVNAAGLTVESYWPSLF------------------ 64
           ELACTY ALILH DAISV AEKI+  V AAGLTVESYWPSLF                  
Sbjct: 33  ELACTYAALILHDDAISVTAEKIATLVKAAGLTVESYWPSLFAKLSSKRNIDDLILNVGS 92

Query: 65  -------SLSISSSA-GNAAPAP--------EEVMEESEDEMVLG 76
                  S++ SSSA  +AAPAP        EE +EESED++V G
Sbjct: 93  AAASAPLSMASSSSADASAAPAPAPAPVEKKEEAVEESEDDLVFG 137

[Close]

BLAST of CaUC01G000110 vs. NCBI nr
Match: XP_006394706.1 (60S acidic ribosomal protein P1 [Eutrema salsugineum] >ESQ31992.1 hypothetical protein EUTSA_v10005602mg [Eutrema salsugineum])

HSP 1 Score: 76.3 bits (186), Expect = 1.3e-10
Identity = 48/107 (44.86%), Postives = 58/107 (54.21%), Query Frame = 0


Query: 2   STSELACTYTALILHGDAISVAAEKISKSVNAAGLTVESYWPSLFS------------LS 61
           +TSELACTY ALILH D I + AEKISK V AA + VESYWPSLF+            ++
Sbjct: 4   TTSELACTYAALILHDDGIEITAEKISKLVKAANVNVESYWPSLFAKLCQKKNIDDLIMN 63

Query: 62  ISSSAGNAAPA---------------------PEEVMEESEDEMVLG 76
           + +S G AAP                       E+V EESED+MV G
Sbjct: 64  VGASGGAAAPVATNDVPAATQAVPAAEDIKKKKEDVKEESEDDMVFG 110

[Close]

BLAST of CaUC01G000110 vs. NCBI nr
Match: VDD28308.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 74.3 bits (181), Expect = 5.0e-10
Identity = 47/105 (44.76%), Postives = 57/105 (54.29%), Query Frame = 0


Query: 2   STSELACTYTALILHGDAISVAAEKISKSVNAAGLTVESYWPSLFS----------LSIS 61
           +TSELACTY ALILH D I + AEKI+K V AA + VESYWPSLF+          +++ 
Sbjct: 3   NTSELACTYAALILHDDGIEITAEKIAKLVKAANVNVESYWPSLFAKLFREEQRLIMNVG 62

Query: 62  SSAGNAAPA---------------------PEEVMEESEDEMVLG 76
           +S   AAP                       EEV EESED+MV G
Sbjct: 63  ASGDAAAPVASNVPTAAQAVPAAEETKNKKKEEVKEESEDDMVFG 107

[Close]

BLAST of CaUC01G000110 vs. NCBI nr
Match: XP_013659163.1 (60S acidic ribosomal protein P1 isoform X2 [Brassica napus])

HSP 1 Score: 73.9 bits (180), Expect = 6.6e-10
Identity = 47/106 (44.34%), Postives = 57/106 (53.77%), Query Frame = 0


Query: 2   STSELACTYTALILHGDAISVAAEKISKSVNAAGLTVESYWPSLFS------------LS 61
           +TSELACTY ALILH D I + AEKI+K V AA + VESYWPSLF+            ++
Sbjct: 3   NTSELACTYAALILHDDGIEITAEKIAKLVKAANVNVESYWPSLFAKLCQKKNIDDLIMN 62

Query: 62  ISSSAGNAAPA--------------------PEEVMEESEDEMVLG 76
           + +S   AAP                      EEV EESED+MV G
Sbjct: 63  VGASGDAAAPVATNVPAAAQAVPSAEETKKKKEEVKEESEDDMVFG 108

[Close]

BLAST of CaUC01G000110 vs. ExPASy Swiss-Prot
Match: P29763 (60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii OX=3055 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 5.8e-09
Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 0


Query: 1  MSTSELACTYTALILHGDAISVAAEKISKSVNAAGLTVESYWPSLFS-----------LS 60
          MSTSELACTY ALILH D + + A+ I+    AAG+ VE YWP+LF+           ++
Sbjct: 1  MSTSELACTYAALILHDDGLEITADNINTICKAAGVEVEGYWPALFAKLFAKKSMDDLIT 60

[Close]

BLAST of CaUC01G000110 vs. ExPASy Swiss-Prot
Match: P52855 (60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.7e-08
Identity = 40/98 (40.82%), Postives = 52/98 (53.06%), Query Frame = 0


Query: 1  MSTSELACTYTALILHGDAISVAAEKISKSVNAAGLTVESYWPSLFS------------L 60
          M++ ELAC Y ALIL  D I++ AEKI+  V AA + VESYWP+LF+            L
Sbjct: 1  MASGELACRYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLIL 60

Query: 61 SISSSAG---------------NAAPAPEEVMEESEDE 72
          S+ S  G                AAPA EE  EE+++E
Sbjct: 61 SVGSGGGAAPVAAAAPAGGAAAAAAPAVEEKKEEAKEE 98

[Close]

BLAST of CaUC01G000110 vs. ExPASy Swiss-Prot
Match: P47955 (60S acidic ribosomal protein P1 OS=Mus musculus OX=10090 GN=Rplp1 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.8e-08
Identity = 39/109 (35.78%), Postives = 55/109 (50.46%), Query Frame = 0


Query: 2   STSELACTYTALILHGDAISVAAEKISKSVNAAGLTVESYWPSLFSLSI----------- 61
           S SELAC Y+ALILH D ++V  +KI+  + AAG++VE +WP LF+ ++           
Sbjct: 3   SVSELACIYSALILHDDEVTVTEDKINALIKAAGVSVEPFWPGLFAKALANVNIGSLICN 62

Query: 62  -----------SSSAGNAAP-------------APEEVMEESEDEMVLG 76
                      ++ AG AAP             A +E  EESED+M  G
Sbjct: 63  VGAGGPAPAAGAAPAGGAAPSTAAAPAEEKKVEAKKEESEESEDDMGFG 111

[Close]

BLAST of CaUC01G000110 vs. ExPASy Swiss-Prot
Match: P18660 (60S acidic ribosomal protein P1 OS=Gallus gallus OX=9031 GN=RPLP1 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 6.4e-08
Identity = 38/109 (34.86%), Postives = 54/109 (49.54%), Query Frame = 0


Query: 2   STSELACTYTALILHGDAISVAAEKISKSVNAAGLTVESYWPSLFSLSISS--------- 61
           S SELAC Y+ALILH D ++V  +KI+  + AAG+ VE +WP LF+ ++++         
Sbjct: 3   SVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANIDIGSLICN 62

Query: 62  -------------------SAGNAAPAPE-------EVMEESEDEMVLG 76
                              + G AAPA E       E  EES+D+M  G
Sbjct: 63  VGAGGGAPAAAAPAGGAAPAGGGAAPAEEKKEEEKKEESEESDDDMGFG 111

[Close]

BLAST of CaUC01G000110 vs. ExPASy Swiss-Prot
Match: Q56K14 (60S acidic ribosomal protein P1 OS=Bos taurus OX=9913 GN=RPLP1 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 8.4e-08
Identity = 29/68 (42.65%), Postives = 43/68 (63.24%), Query Frame = 0


Query: 2  STSELACTYTALILHGDAISVAAEKISKSVNAAGLTVESYWPSLFSLSISS--------S 61
          S SELAC Y+ALILH D ++V  +KI+  + AAG+ VE +WP LF+ ++++        +
Sbjct: 3  SVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICN 62

[Close]

BLAST of CaUC01G000110 vs. ExPASy TrEMBL
Match: A0A6J1C9A3 (60S acidic ribosomal protein P1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009401 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.2e-14
Identity = 58/109 (53.21%), Postives = 65/109 (59.63%), Query Frame = 0


Query: 1   MSTSELACTYTALILHGDAISVAAEKISKSVNAAGLTVESYWPSLF-------------- 60
           MSTSELACTY ALILH DAISV AEKI+  V AAGLTVESYWPSLF              
Sbjct: 1   MSTSELACTYAALILHDDAISVTAEKIATLVKAAGLTVESYWPSLFAKLSSKRNIDDLIL 60

Query: 61  -----------SLSISSSA-GNAAPAP--------EEVMEESEDEMVLG 76
                      S++ SSSA  +AAPAP        EE +EESED++V G
Sbjct: 61  NVGSAAASAPLSMASSSSADASAAPAPAPAPVEKKEEAVEESEDDLVFG 109

[Close]

BLAST of CaUC01G000110 vs. ExPASy TrEMBL
Match: A0A6J1CC92 (60S acidic ribosomal protein P1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009401 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.8e-12
Identity = 54/105 (51.43%), Postives = 61/105 (58.10%), Query Frame = 0


Query: 5   ELACTYTALILHGDAISVAAEKISKSVNAAGLTVESYWPSLF------------------ 64
           ELACTY ALILH DAISV AEKI+  V AAGLTVESYWPSLF                  
Sbjct: 33  ELACTYAALILHDDAISVTAEKIATLVKAAGLTVESYWPSLFAKLSSKRNIDDLILNVGS 92

Query: 65  -------SLSISSSA-GNAAPAP--------EEVMEESEDEMVLG 76
                  S++ SSSA  +AAPAP        EE +EESED++V G
Sbjct: 93  AAASAPLSMASSSSADASAAPAPAPAPVEKKEEAVEESEDDLVFG 137

[Close]

BLAST of CaUC01G000110 vs. ExPASy TrEMBL
Match: V4KQ04 (Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10005602mg PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 6.4e-11
Identity = 48/107 (44.86%), Postives = 58/107 (54.21%), Query Frame = 0


Query: 2   STSELACTYTALILHGDAISVAAEKISKSVNAAGLTVESYWPSLFS------------LS 61
           +TSELACTY ALILH D I + AEKISK V AA + VESYWPSLF+            ++
Sbjct: 4   TTSELACTYAALILHDDGIEITAEKISKLVKAANVNVESYWPSLFAKLCQKKNIDDLIMN 63

Query: 62  ISSSAGNAAPA---------------------PEEVMEESEDEMVLG 76
           + +S G AAP                       E+V EESED+MV G
Sbjct: 64  VGASGGAAAPVATNDVPAATQAVPAAEDIKKKKEDVKEESEDDMVFG 110

[Close]

BLAST of CaUC01G000110 vs. ExPASy TrEMBL
Match: A0A3P6DP70 (Uncharacterized protein OS=Brassica oleracea OX=3712 GN=BOLC9T53631H PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.4e-10
Identity = 47/105 (44.76%), Postives = 57/105 (54.29%), Query Frame = 0


Query: 2   STSELACTYTALILHGDAISVAAEKISKSVNAAGLTVESYWPSLFS----------LSIS 61
           +TSELACTY ALILH D I + AEKI+K V AA + VESYWPSLF+          +++ 
Sbjct: 3   NTSELACTYAALILHDDGIEITAEKIAKLVKAANVNVESYWPSLFAKLFREEQRLIMNVG 62

Query: 62  SSAGNAAPA---------------------PEEVMEESEDEMVLG 76
           +S   AAP                       EEV EESED+MV G
Sbjct: 63  ASGDAAAPVASNVPTAAQAVPAAEETKNKKKEEVKEESEDDMVFG 107

[Close]

BLAST of CaUC01G000110 vs. ExPASy TrEMBL
Match: A0A397XR95 (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRAA09T36288Z PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.2e-10
Identity = 47/106 (44.34%), Postives = 57/106 (53.77%), Query Frame = 0


Query: 2   STSELACTYTALILHGDAISVAAEKISKSVNAAGLTVESYWPSLFS------------LS 61
           +TSELACTY ALILH D I + AEKI+K V AA + VESYWPSLF+            ++
Sbjct: 3   NTSELACTYAALILHDDGIEITAEKIAKLVKAANVNVESYWPSLFAKLCQKKNIDDLIMN 62

Query: 62  ISSSAGNAAPA--------------------PEEVMEESEDEMVLG 76
           + +S   AAP                      EEV EESED+MV G
Sbjct: 63  VGASGDAAAPVATNVPAAAQAVPAAEETKKKKEEVKEESEDDMVFG 108

[Close]

BLAST of CaUC01G000110 vs. TAIR 10
Match: AT5G24510.1 (60S acidic ribosomal protein family )

HSP 1 Score: 70.5 bits (171), Expect = 6.8e-13
Identity = 49/108 (45.37%), Postives = 58/108 (53.70%), Query Frame = 0


Query: 1   MSTSELACTYTALILHGDAISVAAEKISKSVNAAGLTVESYWPSLFS----------LSI 60
           MSTSELACTY ALILH D I + AE ISK V  A + VESYWPSLF+          L +
Sbjct: 1   MSTSELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIM 60

Query: 61  SSSAG---------NAAPA-------PEE-------VMEESEDEMVLG 76
           +  AG          AAP        PEE       + EESED+M++G
Sbjct: 61  NVGAGGCGVARPVTTAAPTASQSVSIPEEKKNEMEVIKEESEDDMIIG 108

[Close]

BLAST of CaUC01G000110 vs. TAIR 10
Match: AT1G01100.3 (60S acidic ribosomal protein family )

HSP 1 Score: 58.9 bits (141), Expect = 2.0e-09
Identity = 36/92 (39.13%), Postives = 54/92 (58.70%), Query Frame = 0


Query: 1  MST-SELACTYTALILHGDAISVAAEKISKSVNAAGLTVESYWPSLFS------------ 60
          MST  ELAC+Y  +IL  + I++ A+KI+  V AAG+++ESYWP LF+            
Sbjct: 1  MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60

Query: 61 LSISSSAGNAAPAPEEVMEE---SEDEMVLGF 77
          +++ +  G AAPA EE  ++    E +  LGF
Sbjct: 61 MNVGAGGGGAAPAAEEKKKDEPAEESDGDLGF 92

[Close]

BLAST of CaUC01G000110 vs. TAIR 10
Match: AT5G47700.1 (60S acidic ribosomal protein family )

HSP 1 Score: 53.9 bits (128), Expect = 6.6e-08
Identity = 29/72 (40.28%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 1  MST-SELACTYTALILHGDAISVAAEKISKSVNAAGLTVESYWPSLFS------------ 60
          MST  ELAC+Y  +IL  + I++ A+KI+  V AAG+T+ESYWP LF+            
Sbjct: 1  MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60

[Close]

BLAST of CaUC01G000110 vs. TAIR 10
Match: AT5G47700.2 (60S acidic ribosomal protein family )

HSP 1 Score: 53.9 bits (128), Expect = 6.6e-08
Identity = 29/72 (40.28%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 1  MST-SELACTYTALILHGDAISVAAEKISKSVNAAGLTVESYWPSLFS------------ 60
          MST  ELAC+Y  +IL  + I++ A+KI+  V AAG+T+ESYWP LF+            
Sbjct: 1  MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60

[Close]

BLAST of CaUC01G000110 vs. TAIR 10
Match: AT1G01100.1 (60S acidic ribosomal protein family )

HSP 1 Score: 52.4 bits (124), Expect = 1.9e-07
Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 1  MST-SELACTYTALILHGDAISVAAEKISKSVNAAGLTVESYWPSLFS------------ 60
          MST  ELAC+Y  +IL  + I++ A+KI+  V AAG+++ESYWP LF+            
Sbjct: 1  MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60

The following BLAST results are available for this feature:

BLAST of CaUC01G000110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138164.1	1.3e-13	53.21	60S acidic ribosomal protein P1-like isoform X2 [Momordica charantia]	[more]
XP_022138163.1	1.2e-11	51.43	60S acidic ribosomal protein P1-like isoform X1 [Momordica charantia]	[more]
XP_006394706.1	1.3e-10	44.86	60S acidic ribosomal protein P1 [Eutrema salsugineum] >ESQ31992.1 hypothetical p...	[more]
VDD28308.1	5.0e-10	44.76	unnamed protein product [Brassica oleracea]	[more]
XP_013659163.1	6.6e-10	44.34	60S acidic ribosomal protein P1 isoform X2 [Brassica napus]	[more]

BLAST of CaUC01G000110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29763	5.8e-09	46.48	60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii OX=3055 PE=3 SV=1	[more]
P52855	1.7e-08	40.82	60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1	[more]
P47955	3.8e-08	35.78	60S acidic ribosomal protein P1 OS=Mus musculus OX=10090 GN=Rplp1 PE=1 SV=1	[more]
P18660	6.4e-08	34.86	60S acidic ribosomal protein P1 OS=Gallus gallus OX=9031 GN=RPLP1 PE=3 SV=1	[more]
Q56K14	8.4e-08	42.65	60S acidic ribosomal protein P1 OS=Bos taurus OX=9913 GN=RPLP1 PE=3 SV=1	[more]

BLAST of CaUC01G000110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C9A3	6.2e-14	53.21	60S acidic ribosomal protein P1-like isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CC92	5.8e-12	51.43	60S acidic ribosomal protein P1-like isoform X1 OS=Momordica charantia OX=3673 G...	[more]
V4KQ04	6.4e-11	44.86	Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10005602mg PE=...	[more]
A0A3P6DP70	2.4e-10	44.76	Uncharacterized protein OS=Brassica oleracea OX=3712 GN=BOLC9T53631H PE=3 SV=1	[more]
A0A397XR95	3.2e-10	44.34	Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRAA09T36288Z PE=3 SV=...	[more]

BLAST of CaUC01G000110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24510.1	6.8e-13	45.37	60S acidic ribosomal protein family	[more]
AT1G01100.3	2.0e-09	39.13	60S acidic ribosomal protein family	[more]
AT5G47700.1	6.6e-08	40.28	60S acidic ribosomal protein family	[more]
AT5G47700.2	6.6e-08	40.28	60S acidic ribosomal protein family	[more]
AT1G01100.1	1.9e-07	38.89	60S acidic ribosomal protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038716	Ribosomal protein P1/P2, N-terminal domain	GENE3D	1.10.10.1410		coord: 1..53 e-value: 2.2E-18 score: 67.9
None	No IPR available	PANTHER	PTHR45696	60S ACIDIC RIBOSOMAL PROTEIN P1	coord: 1..47

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G000110.1	CaUC01G000110.1	mRNA