CSPI07G09040 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCTTTAGCTTGACAAATGCTTTCACAACCTTAATGTATGAGGTATTCCTGAGTATCTAGATCAATTTCTTGATGACATTGTGGTTTTCAGTTCCAGCCTTGAAAAACACTAGACCCACCTTCGATTAGTCTTTGACAAGTTCCAACAGAATAAATTATATGTTAAGAAAGACAAATGTGCTTTTGCTCAACAACATATCAATTTTCTAGTTCACGTCATTGAATATTCGAATAGACGAGGATAAGTTGCAAGCTATTAAAGAGTGGAGAGACCCCACTTCCGTGATAGAATTACGCTCCTTCCTTGGATTGGCTAATTACTGTTGTCGGTTCATTGAAGGATTCTCAAGAAGGGTTGCATTATTGACTAAGTTATTGAAGAAAGGTAGGACTTGGATATGGCTAGTCGAATGTCAAACTGCTTTTGACAAACTAAAGGTGACAATAATGAGGGGTCTTGTCTTCAGATTGGTGGATGTCTCTAAGCTGTTTGTAGTTGAGACTGACGTGTCAGATTTTTCTCTTGAGGGCGTCCTTACCCAAGAGGGTCACCAAATAGCTTATGCGAGCCGTAAGCTTAATAGTACTAAGAGGAGGTATACTGTCTTCGAGAAAGAAATGCTTTCAGTGGTCCATTGTCTAAGGACCTGGAGGCAATATTTACTAGGATCACAATTCATGGTGAAATCTGACAACTCTATCTGTCACTTCTTTAGCCAACCTAAGTTGACCTTTAAGTAA ATGTCCTTTAGCTTGACAAATGCTTTCACAACCTTAATGTATGAGTTCACGTCATTGAATATTCGAATAGACGAGGATAAGTTGCAAGCTATTAAAGAGTGGAGAGACCCCACTTCCGTGATAGAATTACGCTCCTTCCTTGGATTGGCTAATTACTGTTGTCGGTTCATTGAAGGATTCTCAAGAAGGGTTGCATTATTGACTAAGTTATTGAAGAAAGGTAGGACTTGGATATGGCTAGTCGAATGTCAAACTGCTTTTGACAAACTAAAGGTGACAATAATGAGGGGTCTTGTCTTCAGATTGGTGGATGTCTCTAAGCTGTTTGTAGTTGAGACTGACGTGTCAGATTTTTCTCTTGAGGGCGTCCTTACCCAAGAGGGTCACCAAATAGCTTATGCGAGCCGTAAGCTTAATAGTACTAAGAGGAGGTATACTGTCTTCGAGAAAGAAATGCTTTCAGTGGTCCATTGTCTAAGGACCTGGAGGCAATATTTACTAGGATCACAATTCATGGTGAAATCTGACAACTCTATCTGTCACTTCTTTAGCCAACCTAAGTTGACCTTTAAGTAA ATGTCCTTTAGCTTGACAAATGCTTTCACAACCTTAATGTATGAGTTCACGTCATTGAATATTCGAATAGACGAGGATAAGTTGCAAGCTATTAAAGAGTGGAGAGACCCCACTTCCGTGATAGAATTACGCTCCTTCCTTGGATTGGCTAATTACTGTTGTCGGTTCATTGAAGGATTCTCAAGAAGGGTTGCATTATTGACTAAGTTATTGAAGAAAGGTAGGACTTGGATATGGCTAGTCGAATGTCAAACTGCTTTTGACAAACTAAAGGTGACAATAATGAGGGGTCTTGTCTTCAGATTGGTGGATGTCTCTAAGCTGTTTGTAGTTGAGACTGACGTGTCAGATTTTTCTCTTGAGGGCGTCCTTACCCAAGAGGGTCACCAAATAGCTTATGCGAGCCGTAAGCTTAATAGTACTAAGAGGAGGTATACTGTCTTCGAGAAAGAAATGCTTTCAGTGGTCCATTGTCTAAGGACCTGGAGGCAATATTTACTAGGATCACAATTCATGGTGAAATCTGACAACTCTATCTGTCACTTCTTTAGCCAACCTAAGTTGACCTTTAAGTAA MSFSLTNAFTTLMYEFTSLNIRIDEDKLQAIKEWRDPTSVIELRSFLGLANYCCRFIEGFSRRVALLTKLLKKGRTWIWLVECQTAFDKLKVTIMRGLVFRLVDVSKLFVVETDVSDFSLEGVLTQEGHQIAYASRKLNSTKRRYTVFEKEMLSVVHCLRTWRQYLLGSQFMVKSDNSICHFFSQPKLTFK* Homology
BLAST of CSPI07G09040 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 9.3e-24 Identity = 63/169 (37.28%), Postives = 99/169 (58.58%), Query Frame = 0
BLAST of CSPI07G09040 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.6e-23 Identity = 64/153 (41.83%), Postives = 94/153 (61.44%), Query Frame = 0
BLAST of CSPI07G09040 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.3e-17 Identity = 49/147 (33.33%), Postives = 79/147 (53.74%), Query Frame = 0
BLAST of CSPI07G09040 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.3e-17 Identity = 49/147 (33.33%), Postives = 79/147 (53.74%), Query Frame = 0
BLAST of CSPI07G09040 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.3e-17 Identity = 49/147 (33.33%), Postives = 79/147 (53.74%), Query Frame = 0
BLAST of CSPI07G09040 vs. ExPASy TrEMBL
Match: A0A6J1IEF9 (uncharacterized protein LOC111474945 OS=Cucurbita maxima OX=3661 GN=LOC111474945 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 1.1e-59 Identity = 119/172 (69.19%), Postives = 138/172 (80.23%), Query Frame = 0
BLAST of CSPI07G09040 vs. ExPASy TrEMBL
Match: A0A6J1D906 (Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 4.6e-58 Identity = 117/172 (68.02%), Postives = 138/172 (80.23%), Query Frame = 0
BLAST of CSPI07G09040 vs. ExPASy TrEMBL
Match: A0A6J1IDF7 (uncharacterized protein LOC111474215 OS=Cucurbita maxima OX=3661 GN=LOC111474215 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 2.3e-57 Identity = 115/172 (66.86%), Postives = 136/172 (79.07%), Query Frame = 0
BLAST of CSPI07G09040 vs. ExPASy TrEMBL
Match: A0A6J1IKW3 (uncharacterized protein LOC111475039 OS=Cucurbita maxima OX=3661 GN=LOC111475039 PE=4 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 3.0e-57 Identity = 118/184 (64.13%), Postives = 139/184 (75.54%), Query Frame = 0
BLAST of CSPI07G09040 vs. ExPASy TrEMBL
Match: A0A6J1IGF5 (uncharacterized protein LOC111474513 OS=Cucurbita maxima OX=3661 GN=LOC111474513 PE=4 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 1.1e-56 Identity = 118/184 (64.13%), Postives = 138/184 (75.00%), Query Frame = 0
BLAST of CSPI07G09040 vs. NCBI nr
Match: XP_022975516.1 (uncharacterized protein LOC111474945, partial [Cucurbita maxima]) HSP 1 Score: 239.6 bits (610), Expect = 2.3e-59 Identity = 119/172 (69.19%), Postives = 138/172 (80.23%), Query Frame = 0
BLAST of CSPI07G09040 vs. NCBI nr
Match: XP_023537907.1 (uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 238.8 bits (608), Expect = 3.9e-59 Identity = 120/172 (69.77%), Postives = 136/172 (79.07%), Query Frame = 0
BLAST of CSPI07G09040 vs. NCBI nr
Match: XP_023524533.1 (uncharacterized protein LOC111788429 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 238.8 bits (608), Expect = 3.9e-59 Identity = 120/172 (69.77%), Postives = 136/172 (79.07%), Query Frame = 0
BLAST of CSPI07G09040 vs. NCBI nr
Match: XP_022150099.1 (uncharacterized protein LOC111018360 [Momordica charantia]) HSP 1 Score: 234.2 bits (596), Expect = 9.5e-58 Identity = 117/172 (68.02%), Postives = 138/172 (80.23%), Query Frame = 0
BLAST of CSPI07G09040 vs. NCBI nr
Match: XP_022975176.1 (uncharacterized protein LOC111474215 [Cucurbita maxima]) HSP 1 Score: 231.9 bits (590), Expect = 4.7e-57 Identity = 115/172 (66.86%), Postives = 136/172 (79.07%), Query Frame = 0
BLAST of CSPI07G09040 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein ) HSP 1 Score: 54.3 bits (129), Expect = 1.3e-07 Identity = 37/107 (34.58%), Postives = 54/107 (50.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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