CSPI07G09040 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G09040
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Reverse transcriptase
Location	Chr7: 6870094 .. 6870837 (+)
RNA-Seq Expression	CSPI07G09040
Synteny	CSPI07G09040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTTTAGCTTGACAAATGCTTTCACAACCTTAATGTATGAGGTATTCCTGAGTATCTAGATCAATTTCTTGATGACATTGTGGTTTTCAGTTCCAGCCTTGAAAAACACTAGACCCACCTTCGATTAGTCTTTGACAAGTTCCAACAGAATAAATTATATGTTAAGAAAGACAAATGTGCTTTTGCTCAACAACATATCAATTTTCTAGTTCACGTCATTGAATATTCGAATAGACGAGGATAAGTTGCAAGCTATTAAAGAGTGGAGAGACCCCACTTCCGTGATAGAATTACGCTCCTTCCTTGGATTGGCTAATTACTGTTGTCGGTTCATTGAAGGATTCTCAAGAAGGGTTGCATTATTGACTAAGTTATTGAAGAAAGGTAGGACTTGGATATGGCTAGTCGAATGTCAAACTGCTTTTGACAAACTAAAGGTGACAATAATGAGGGGTCTTGTCTTCAGATTGGTGGATGTCTCTAAGCTGTTTGTAGTTGAGACTGACGTGTCAGATTTTTCTCTTGAGGGCGTCCTTACCCAAGAGGGTCACCAAATAGCTTATGCGAGCCGTAAGCTTAATAGTACTAAGAGGAGGTATACTGTCTTCGAGAAAGAAATGCTTTCAGTGGTCCATTGTCTAAGGACCTGGAGGCAATATTTACTAGGATCACAATTCATGGTGAAATCTGACAACTCTATCTGTCACTTCTTTAGCCAACCTAAGTTGACCTTTAAGTAA

mRNA sequence

ATGTCCTTTAGCTTGACAAATGCTTTCACAACCTTAATGTATGAGTTCACGTCATTGAATATTCGAATAGACGAGGATAAGTTGCAAGCTATTAAAGAGTGGAGAGACCCCACTTCCGTGATAGAATTACGCTCCTTCCTTGGATTGGCTAATTACTGTTGTCGGTTCATTGAAGGATTCTCAAGAAGGGTTGCATTATTGACTAAGTTATTGAAGAAAGGTAGGACTTGGATATGGCTAGTCGAATGTCAAACTGCTTTTGACAAACTAAAGGTGACAATAATGAGGGGTCTTGTCTTCAGATTGGTGGATGTCTCTAAGCTGTTTGTAGTTGAGACTGACGTGTCAGATTTTTCTCTTGAGGGCGTCCTTACCCAAGAGGGTCACCAAATAGCTTATGCGAGCCGTAAGCTTAATAGTACTAAGAGGAGGTATACTGTCTTCGAGAAAGAAATGCTTTCAGTGGTCCATTGTCTAAGGACCTGGAGGCAATATTTACTAGGATCACAATTCATGGTGAAATCTGACAACTCTATCTGTCACTTCTTTAGCCAACCTAAGTTGACCTTTAAGTAA

Coding sequence (CDS)

ATGTCCTTTAGCTTGACAAATGCTTTCACAACCTTAATGTATGAGTTCACGTCATTGAATATTCGAATAGACGAGGATAAGTTGCAAGCTATTAAAGAGTGGAGAGACCCCACTTCCGTGATAGAATTACGCTCCTTCCTTGGATTGGCTAATTACTGTTGTCGGTTCATTGAAGGATTCTCAAGAAGGGTTGCATTATTGACTAAGTTATTGAAGAAAGGTAGGACTTGGATATGGCTAGTCGAATGTCAAACTGCTTTTGACAAACTAAAGGTGACAATAATGAGGGGTCTTGTCTTCAGATTGGTGGATGTCTCTAAGCTGTTTGTAGTTGAGACTGACGTGTCAGATTTTTCTCTTGAGGGCGTCCTTACCCAAGAGGGTCACCAAATAGCTTATGCGAGCCGTAAGCTTAATAGTACTAAGAGGAGGTATACTGTCTTCGAGAAAGAAATGCTTTCAGTGGTCCATTGTCTAAGGACCTGGAGGCAATATTTACTAGGATCACAATTCATGGTGAAATCTGACAACTCTATCTGTCACTTCTTTAGCCAACCTAAGTTGACCTTTAAGTAA

Protein sequence

MSFSLTNAFTTLMYEFTSLNIRIDEDKLQAIKEWRDPTSVIELRSFLGLANYCCRFIEGFSRRVALLTKLLKKGRTWIWLVECQTAFDKLKVTIMRGLVFRLVDVSKLFVVETDVSDFSLEGVLTQEGHQIAYASRKLNSTKRRYTVFEKEMLSVVHCLRTWRQYLLGSQFMVKSDNSICHFFSQPKLTFK*

Homology

[Close]

BLAST of CSPI07G09040 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 9.3e-24
Identity = 63/169 (37.28%), Postives = 99/169 (58.58%), Query Frame = 0


Query: 10  TTLMYEFTSLNIRIDEDKLQAIKEWRDPTSVIELRSFLGLANYCCRFIEGFSRRVALLTK 69
           T L +  T   I+ + +K++AI+++  PT   E+++FLGL  Y  +FI  F+     +TK
Sbjct: 409 TFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTK 468

Query: 70  LLKKG-RTWIWLVECQTAFDKLKVTIMRGLVFRLVDVSKLFVVETDVSDFSLEGVLTQEG 129
            LKK  +      E  +AF KLK  I    + ++ D +K F + TD SD +L  VL+Q+G
Sbjct: 469 CLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQDG 528

Query: 130 HQIAYASRKLNSTKRRYTVFEKEMLSVVHCLRTWRQYLLGSQFMVKSDN 178
           H ++Y SR LN  +  Y+  EKE+L++V   +T+R YLLG  F + SD+
Sbjct: 529 HPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDH 577

[Close]

BLAST of CSPI07G09040 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.6e-23
Identity = 64/153 (41.83%), Postives = 94/153 (61.44%), Query Frame = 0


Query: 27  KLQAIKEWRDPTSVIELRSFLGLANYCCRFIEGFSRRVALLTKLLKKGRTWI--WLVECQ 86
           K++AI  +  PT   E+R+FLGL  Y  +FI  ++     +T  LKK RT I    +E  
Sbjct: 425 KVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKK-RTKIDTQKLEYI 484

Query: 87  TAFDKLKVTIMRGLVFRLVDVSKLFVVETDVSDFSLEGVLTQEGHQIAYASRKLNSTKRR 146
            AF+KLK  I+R  + +L D  K FV+ TD S+ +L  VL+Q GH I++ SR LN  +  
Sbjct: 485 EAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELN 544

Query: 147 YTVFEKEMLSVVHCLRTWRQYLLGSQFMVKSDN 178
           Y+  EKE+L++V   +T+R YLLG QF++ SD+
Sbjct: 545 YSAIEKELLAIVWATKTFRHYLLGRQFLIASDH 576

[Close]

BLAST of CSPI07G09040 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-17
Identity = 49/147 (33.33%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 25  EDKLQAIKEWRDPTSVIELRSFLGLANYCCRFIEGFSRRVALLTKLLKKGRTWIWLVECQ 84
           ++ +  + +W+ P +  ELR FLG  NY  +FI   S+    L  LLKK   W W     
Sbjct: 624 QENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQT 683

Query: 85  TAFDKLKVTIMRGLVFRLVDVSKLFVVETDVSDFSLEGVLTQEG-----HQIAYASRKLN 144
            A + +K  ++   V R  D SK  ++ETD SD ++  VL+Q+      + + Y S K++
Sbjct: 684 QAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMS 743

Query: 145 STKRRYTVFEKEMLSVVHCLRTWRQYL 167
             +  Y+V +KEML+++  L+ WR YL
Sbjct: 744 KAQLNYSVSDKEMLAIIKSLKHWRHYL 770

[Close]

BLAST of CSPI07G09040 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-17
Identity = 49/147 (33.33%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 25  EDKLQAIKEWRDPTSVIELRSFLGLANYCCRFIEGFSRRVALLTKLLKKGRTWIWLVECQ 84
           ++ +  + +W+ P +  ELR FLG  NY  +FI   S+    L  LLKK   W W     
Sbjct: 624 QENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQT 683

Query: 85  TAFDKLKVTIMRGLVFRLVDVSKLFVVETDVSDFSLEGVLTQEG-----HQIAYASRKLN 144
            A + +K  ++   V R  D SK  ++ETD SD ++  VL+Q+      + + Y S K++
Sbjct: 684 QAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMS 743

Query: 145 STKRRYTVFEKEMLSVVHCLRTWRQYL 167
             +  Y+V +KEML+++  L+ WR YL
Sbjct: 744 KAQLNYSVSDKEMLAIIKSLKHWRHYL 770

[Close]

BLAST of CSPI07G09040 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-17
Identity = 49/147 (33.33%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 25  EDKLQAIKEWRDPTSVIELRSFLGLANYCCRFIEGFSRRVALLTKLLKKGRTWIWLVECQ 84
           ++ +  + +W+ P +  ELR FLG  NY  +FI   S+    L  LLKK   W W     
Sbjct: 624 QENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQT 683

Query: 85  TAFDKLKVTIMRGLVFRLVDVSKLFVVETDVSDFSLEGVLTQEG-----HQIAYASRKLN 144
            A + +K  ++   V R  D SK  ++ETD SD ++  VL+Q+      + + Y S K++
Sbjct: 684 QAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMS 743

Query: 145 STKRRYTVFEKEMLSVVHCLRTWRQYL 167
             +  Y+V +KEML+++  L+ WR YL
Sbjct: 744 KAQLNYSVSDKEMLAIIKSLKHWRHYL 770

[Close]

BLAST of CSPI07G09040 vs. ExPASy TrEMBL
Match: A0A6J1IEF9 (uncharacterized protein LOC111474945 OS=Cucurbita maxima OX=3661 GN=LOC111474945 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.1e-59
Identity = 119/172 (69.19%), Postives = 138/172 (80.23%), Query Frame = 0


Query: 21  IRIDEDKLQAIKEWRDPTSVIELRSFLGLANYCCRFIEGFSRRVALLTKLLKKGRTWIWL 80
           I +D DK++AI+EW+ PTSV +LRSFLGLANY  RF+EGFSRR A LT+LLKK  TW W 
Sbjct: 765 ISMDSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHTWSWS 824

Query: 81  VECQTAFDKLKVTIMRGLVFRLVDVSKLFVVETDVSDFSLEGVLTQEGHQIAYASRKLNS 140
            +CQ AF+ LK T+ RG V  LVDV+K F +ETD SDF+L GVL QEGH IA+ SRKLN 
Sbjct: 825 DDCQMAFEDLKTTMTRGPVLGLVDVTKPFEIETDASDFALGGVLIQEGHPIAFESRKLND 884

Query: 141 TKRRYTVFEKEMLSVVHCLRTWRQYLLGSQFMVKSDNS-ICHFFSQPKLTFK 192
            +RRYTV EKEML+VVHCLR WRQYLLGSQF+VK+DNS ICHFF QPKLT K
Sbjct: 885 AERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSAICHFFDQPKLTAK 936

[Close]

BLAST of CSPI07G09040 vs. ExPASy TrEMBL
Match: A0A6J1D906 (Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 4.6e-58
Identity = 117/172 (68.02%), Postives = 138/172 (80.23%), Query Frame = 0


Query: 21   IRIDEDKLQAIKEWRDPTSVIELRSFLGLANYCCRFIEGFSRRVALLTKLLKKGRTWIWL 80
            I +D DK++AI+EWR PTSVIELRSFLGLANY  RFIEGFSRR   +T+LLKKG TW+W 
Sbjct: 863  ISMDTDKVKAIQEWRVPTSVIELRSFLGLANYYRRFIEGFSRRATPMTELLKKGMTWMWS 922

Query: 81   VECQTAFDKLKVTIMRGLVFRLVDVSKLFVVETDVSDFSLEGVLTQEGHQIAYASRKLNS 140
             E Q AF+ LK  +M+G V  L DV+K F VETD SD++L GVL Q+ H I Y SRKLN+
Sbjct: 923  KESQDAFEDLKAAMMKGPVLGLADVTKPFEVETDASDYALGGVLLQDDHPIXYESRKLNN 982

Query: 141  TKRRYTVFEKEMLSVVHCLRTWRQYLLGSQFMVKSDNS-ICHFFSQPKLTFK 192
             +RRYTV EKEML+VVHCLR+WRQYLLGS F+VK+DNS ICHFF+QPKLT K
Sbjct: 983  AERRYTVSEKEMLAVVHCLRSWRQYLLGSXFVVKTDNSAICHFFNQPKLTSK 1034

[Close]

BLAST of CSPI07G09040 vs. ExPASy TrEMBL
Match: A0A6J1IDF7 (uncharacterized protein LOC111474215 OS=Cucurbita maxima OX=3661 GN=LOC111474215 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 2.3e-57
Identity = 115/172 (66.86%), Postives = 136/172 (79.07%), Query Frame = 0


Query: 21  IRIDEDKLQAIKEWRDPTSVIELRSFLGLANYCCRFIEGFSRRVALLTKLLKKGRTWIWL 80
           I +D DK++AI+EW+ PTSV +LRSFLGLANY  RF+EGFSRR A L +LLKK   W+W 
Sbjct: 766 ISMDSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLKELLKKDHPWLWS 825

Query: 81  VECQTAFDKLKVTIMRGLVFRLVDVSKLFVVETDVSDFSLEGVLTQEGHQIAYASRKLNS 140
            +CQ AF+ LK T+M G V  LVDV+K F +ETD SDF+L GVL QEGH IA+ SRKLN 
Sbjct: 826 NDCQMAFEDLKTTMMWGPVLGLVDVTKPFEIETDASDFALGGVLIQEGHPIAFESRKLND 885

Query: 141 TKRRYTVFEKEMLSVVHCLRTWRQYLLGSQFMVKSDNS-ICHFFSQPKLTFK 192
            +RRY V EK+ML+VVHCLR WRQYLLGSQF+VK+DNS ICHFF QPKLT K
Sbjct: 886 AERRYIVSEKKMLTVVHCLRVWRQYLLGSQFVVKTDNSVICHFFDQPKLTAK 937

[Close]

BLAST of CSPI07G09040 vs. ExPASy TrEMBL
Match: A0A6J1IKW3 (uncharacterized protein LOC111475039 OS=Cucurbita maxima OX=3661 GN=LOC111475039 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 3.0e-57
Identity = 118/184 (64.13%), Postives = 139/184 (75.54%), Query Frame = 0


Query: 16  FTSLNIRI-------DEDKLQAIKEWRDPTSVIELRSFLGLANYCCRFIEGFSRRVALLT 75
           FT L++R        D DK++AI+EW+ PTSV +++SF+GLANY  RF+EGFSRR A LT
Sbjct: 137 FTKLDLRSGCEKIGRDSDKIKAIQEWKVPTSVSDVQSFIGLANYYRRFVEGFSRRAAPLT 196

Query: 76  KLLKKGRTWIWLVECQTAFDKLKVTIMRGLVFRLVDVSKLFVVETDVSDFSLEGVLTQEG 135
           +LLKK   W W  +CQ  F+ LK T+ R  V RLVDV+K F +ETD SDF+L GVL QEG
Sbjct: 197 ELLKKDHPWSWSNKCQMTFEDLKATMTRDPVLRLVDVTKPFEIETDASDFALGGVLIQEG 256

Query: 136 HQIAYASRKLNSTKRRYTVFEKEMLSVVHCLRTWRQYLLGSQFMVKSDNS-ICHFFSQPK 192
           H IAY SRKLN  +RRYTV EKEML+VVHCLR WRQYLLGSQF+VK DNS ICHFF QPK
Sbjct: 257 HLIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFIVKMDNSVICHFFDQPK 316

[Close]

BLAST of CSPI07G09040 vs. ExPASy TrEMBL
Match: A0A6J1IGF5 (uncharacterized protein LOC111474513 OS=Cucurbita maxima OX=3661 GN=LOC111474513 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.1e-56
Identity = 118/184 (64.13%), Postives = 138/184 (75.00%), Query Frame = 0


Query: 16  FTSLNIRI-------DEDKLQAIKEWRDPTSVIELRSFLGLANYCCRFIEGFSRRVALLT 75
           FT L++R        D DK++AI+EW+ PTSV +++SFLGLANY  RF+EGFSRR A LT
Sbjct: 137 FTKLDLRSGCEKIGRDSDKIKAIQEWKIPTSVSDVQSFLGLANYYRRFVEGFSRRAAPLT 196

Query: 76  KLLKKGRTWIWLVECQTAFDKLKVTIMRGLVFRLVDVSKLFVVETDVSDFSLEGVLTQEG 135
           +LLKK   W W  +CQ  F+ LK T+ R  V RLVDV+K F +ETD SDF+L GVL QEG
Sbjct: 197 ELLKKDHPWSWSNKCQMTFEDLKATMTRDPVLRLVDVTKPFEIETDASDFALGGVLIQEG 256

Query: 136 HQIAYASRKLNSTKRRYTVFEKEMLSVVHCLRTWRQYLLGSQFMVKSDNS-ICHFFSQPK 192
           H IAY SRKLN  +RRYTV EKEML+VVHCLR WRQYLLGSQF+VK  NS ICHFF QPK
Sbjct: 257 HLIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFIVKMHNSVICHFFDQPK 316

[Close]

BLAST of CSPI07G09040 vs. NCBI nr
Match: XP_022975516.1 (uncharacterized protein LOC111474945, partial [Cucurbita maxima])

HSP 1 Score: 239.6 bits (610), Expect = 2.3e-59
Identity = 119/172 (69.19%), Postives = 138/172 (80.23%), Query Frame = 0


Query: 21  IRIDEDKLQAIKEWRDPTSVIELRSFLGLANYCCRFIEGFSRRVALLTKLLKKGRTWIWL 80
           I +D DK++AI+EW+ PTSV +LRSFLGLANY  RF+EGFSRR A LT+LLKK  TW W 
Sbjct: 765 ISMDSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHTWSWS 824

Query: 81  VECQTAFDKLKVTIMRGLVFRLVDVSKLFVVETDVSDFSLEGVLTQEGHQIAYASRKLNS 140
            +CQ AF+ LK T+ RG V  LVDV+K F +ETD SDF+L GVL QEGH IA+ SRKLN 
Sbjct: 825 DDCQMAFEDLKTTMTRGPVLGLVDVTKPFEIETDASDFALGGVLIQEGHPIAFESRKLND 884

Query: 141 TKRRYTVFEKEMLSVVHCLRTWRQYLLGSQFMVKSDNS-ICHFFSQPKLTFK 192
            +RRYTV EKEML+VVHCLR WRQYLLGSQF+VK+DNS ICHFF QPKLT K
Sbjct: 885 AERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSAICHFFDQPKLTAK 936

[Close]

BLAST of CSPI07G09040 vs. NCBI nr
Match: XP_023537907.1 (uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238.8 bits (608), Expect = 3.9e-59
Identity = 120/172 (69.77%), Postives = 136/172 (79.07%), Query Frame = 0


Query: 21   IRIDEDKLQAIKEWRDPTSVIELRSFLGLANYCCRFIEGFSRRVALLTKLLKKGRTWIWL 80
            I +D DK++AI+EW+ PTSV ELRSFLGLANY  RF+EGFSRR A LT+LLKK   W W 
Sbjct: 869  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWS 928

Query: 81   VECQTAFDKLKVTIMRGLVFRLVDVSKLFVVETDVSDFSLEGVLTQEGHQIAYASRKLNS 140
             +CQ AF+ LK T+ RG V  LVDV+K F VETD SDF+L GVL QEGH IAY SRKLN 
Sbjct: 929  NDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFALGGVLIQEGHPIAYESRKLND 988

Query: 141  TKRRYTVFEKEMLSVVHCLRTWRQYLLGSQFMVKSDNS-ICHFFSQPKLTFK 192
             +RRYTV EKEML+VVHCLR WRQYLLGSQF+VK+DNS  CHFF QPKLT K
Sbjct: 989  AERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAK 1040

[Close]

BLAST of CSPI07G09040 vs. NCBI nr
Match: XP_023524533.1 (uncharacterized protein LOC111788429 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238.8 bits (608), Expect = 3.9e-59
Identity = 120/172 (69.77%), Postives = 136/172 (79.07%), Query Frame = 0


Query: 21   IRIDEDKLQAIKEWRDPTSVIELRSFLGLANYCCRFIEGFSRRVALLTKLLKKGRTWIWL 80
            I +D DK++AI+EW+ PTSV ELRSFLGLANY  RF+EGFSRR A LT+LLKK   W W 
Sbjct: 869  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWS 928

Query: 81   VECQTAFDKLKVTIMRGLVFRLVDVSKLFVVETDVSDFSLEGVLTQEGHQIAYASRKLNS 140
             +CQ AF+ LK T+ RG V  LVDV+K F VETD SDF+L GVL QEGH IAY SRKLN 
Sbjct: 929  NDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFALGGVLIQEGHPIAYESRKLND 988

Query: 141  TKRRYTVFEKEMLSVVHCLRTWRQYLLGSQFMVKSDNS-ICHFFSQPKLTFK 192
             +RRYTV EKEML+VVHCLR WRQYLLGSQF+VK+DNS  CHFF QPKLT K
Sbjct: 989  AERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAK 1040

[Close]

BLAST of CSPI07G09040 vs. NCBI nr
Match: XP_022150099.1 (uncharacterized protein LOC111018360 [Momordica charantia])

HSP 1 Score: 234.2 bits (596), Expect = 9.5e-58
Identity = 117/172 (68.02%), Postives = 138/172 (80.23%), Query Frame = 0


Query: 21   IRIDEDKLQAIKEWRDPTSVIELRSFLGLANYCCRFIEGFSRRVALLTKLLKKGRTWIWL 80
            I +D DK++AI+EWR PTSVIELRSFLGLANY  RFIEGFSRR   +T+LLKKG TW+W 
Sbjct: 863  ISMDTDKVKAIQEWRVPTSVIELRSFLGLANYYRRFIEGFSRRATPMTELLKKGMTWMWS 922

Query: 81   VECQTAFDKLKVTIMRGLVFRLVDVSKLFVVETDVSDFSLEGVLTQEGHQIAYASRKLNS 140
             E Q AF+ LK  +M+G V  L DV+K F VETD SD++L GVL Q+ H I Y SRKLN+
Sbjct: 923  KESQDAFEDLKAAMMKGPVLGLADVTKPFEVETDASDYALGGVLLQDDHPIXYESRKLNN 982

Query: 141  TKRRYTVFEKEMLSVVHCLRTWRQYLLGSQFMVKSDNS-ICHFFSQPKLTFK 192
             +RRYTV EKEML+VVHCLR+WRQYLLGS F+VK+DNS ICHFF+QPKLT K
Sbjct: 983  AERRYTVSEKEMLAVVHCLRSWRQYLLGSXFVVKTDNSAICHFFNQPKLTSK 1034

[Close]

BLAST of CSPI07G09040 vs. NCBI nr
Match: XP_022975176.1 (uncharacterized protein LOC111474215 [Cucurbita maxima])

HSP 1 Score: 231.9 bits (590), Expect = 4.7e-57
Identity = 115/172 (66.86%), Postives = 136/172 (79.07%), Query Frame = 0


Query: 21  IRIDEDKLQAIKEWRDPTSVIELRSFLGLANYCCRFIEGFSRRVALLTKLLKKGRTWIWL 80
           I +D DK++AI+EW+ PTSV +LRSFLGLANY  RF+EGFSRR A L +LLKK   W+W 
Sbjct: 766 ISMDSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLKELLKKDHPWLWS 825

Query: 81  VECQTAFDKLKVTIMRGLVFRLVDVSKLFVVETDVSDFSLEGVLTQEGHQIAYASRKLNS 140
            +CQ AF+ LK T+M G V  LVDV+K F +ETD SDF+L GVL QEGH IA+ SRKLN 
Sbjct: 826 NDCQMAFEDLKTTMMWGPVLGLVDVTKPFEIETDASDFALGGVLIQEGHPIAFESRKLND 885

Query: 141 TKRRYTVFEKEMLSVVHCLRTWRQYLLGSQFMVKSDNS-ICHFFSQPKLTFK 192
            +RRY V EK+ML+VVHCLR WRQYLLGSQF+VK+DNS ICHFF QPKLT K
Sbjct: 886 AERRYIVSEKKMLTVVHCLRVWRQYLLGSQFVVKTDNSVICHFFDQPKLTAK 937

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BLAST of CSPI07G09040 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 1.3e-07
Identity = 37/107 (34.58%), Postives = 54/107 (50.47%), Query Frame = 0


Query: 21  IRIDEDKLQAIKEWRDPTSVIELRSFLGLANYCCRFIEGFSRRVALLTKLLKKGRTWIWL 80
           +  D  KL+A+  W +P +  ELR FLGL  Y  RF++ + + V  LT+LLKK  +  W 
Sbjct: 44  VSADPAKLEAMVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKK-NSLKWT 103

Query: 81  VECQTAFDKLKVTIMRGLVFRLVDVSKLFVVETDVSDFSLEGVLTQE 128
                AF  LK  +    V  L D+   FV  T V  ++    +T+E
Sbjct: 104 EMAALAFKALKGAVTTLPVLALPDLKLPFV--TRVGKWNWSCFITRE 147

The following BLAST results are available for this feature:

BLAST of CSPI07G09040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	9.3e-24	37.28	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	1.6e-23	41.83	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q9UR07	1.3e-17	33.33	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.3e-17	33.33	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.3e-17	33.33	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of CSPI07G09040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IEF9	1.1e-59	69.19	uncharacterized protein LOC111474945 OS=Cucurbita maxima OX=3661 GN=LOC111474945...	[more]
A0A6J1D906	4.6e-58	68.02	Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1	[more]
A0A6J1IDF7	2.3e-57	66.86	uncharacterized protein LOC111474215 OS=Cucurbita maxima OX=3661 GN=LOC111474215...	[more]
A0A6J1IKW3	3.0e-57	64.13	uncharacterized protein LOC111475039 OS=Cucurbita maxima OX=3661 GN=LOC111475039...	[more]
A0A6J1IGF5	1.1e-56	64.13	uncharacterized protein LOC111474513 OS=Cucurbita maxima OX=3661 GN=LOC111474513...	[more]

BLAST of CSPI07G09040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022975516.1	2.3e-59	69.19	uncharacterized protein LOC111474945, partial [Cucurbita maxima]	[more]
XP_023537907.1	3.9e-59	69.77	uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo]	[more]
XP_023524533.1	3.9e-59	69.77	uncharacterized protein LOC111788429 [Cucurbita pepo subsp. pepo]	[more]
XP_022150099.1	9.5e-58	68.02	uncharacterized protein LOC111018360 [Momordica charantia]	[more]
XP_022975176.1	4.7e-57	66.86	uncharacterized protein LOC111474215 [Cucurbita maxima]	[more]

BLAST of CSPI07G09040 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.3e-07	34.58	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 79..173 e-value: 4.0E-26 score: 90.9
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 25..106 e-value: 1.2E-22 score: 81.7
None	No IPR available	GENE3D	3.10.20.370		coord: 107..175 e-value: 4.2E-7 score: 31.8
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 21..176
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 21..176
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 17..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G09040.1	CSPI07G09040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0003676	nucleic acid binding