CSPI07G08960 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G08960
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Ty3/gypsy retrotransposon protein
Location	Chr7: 6794619 .. 6801887 (+)
RNA-Seq Expression	CSPI07G08960
Synteny	CSPI07G08960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGTTGCGGTCAAAGGAAAAGGAATTTGCAGTAATGTTGAAGTCACGGTAGGAGAGTGGAAAATTACAAACAGCTTTTTACCCTTGGAGTTAGGAGGGGTTAATGTAATTTTGGGTATGCAGTGGTTGCACTCATTGGGCACGATTGAATTTGATTGGAAAAATTTAGTGATGACATTCTGACATGAAGGAAGGAAGATAGAGATAAAGGGGGACCCTAGTGTCACCTAAACCCAAGTGAGCCTAAAGTCTATGATGAAGACATGGGGAGCTGATAGTCACGGTTATTTGGTAGAATGTCGGGCCATGGAGGGAAGGCTAGCTGAGGAAGGCTTAGAGGATGAAGAAGTGCCAGCCACTGTTGACAACATGATCTCTCCTCTGTTGAGCAAATTTAATGATGTTTTTGATTGGCTGGAAGAGCTGCCTCCGAAGAGGAACATTGAACACCATATACCCCTTAAGAAGGGGGTGGATCCAGTTAATGTCAGACCTTATCATTACCCACATCAGCAAAAGGAGGAAATGGAAAGACTAGTTGATGAAATGTTGAAGACAGGCATCATAAGACCGGGTACCAGTCCGTATTCCAGCCCAGTCCTTCTCGTGAAAAAGAAAGACGATAGCTGGCGATTTTGTATAGATTATCGGGAGTTGAACAATGTCACTATCCCAGATAAGTTTCCAATTCTGGTCATAGATGAGTTATTCAATGAGCTGAACGGGGCCAACATGTTTTCGAAGATTGATTTAAAGGTGGGTTATCACCAGATCAGGATGCATCCGAGAGGTGTAGAGAAGACGACCTTTCGAACACATGAGGGACACTATGAGTTCTTGGTCATGCCGTTTGGGCTAACCAATGCCCCCTCTACGTTCCAAGCATTAATGAACCACATCTTTAAGCCTTATATGAGTAGATTCGTATCCGTGTTTTTCGATGACGTTTTGGTGCACAGCAAGGGAGTAGAAGAACATGGACAACATCTGGAAGTAGTCTTGGAGATCCTTCGGGAGAATGAATTGTATGTGAATTTAGCCAAATGTTGCTTTGCCAAAGGTATAATAGGTTATTTGGGGCATTTCATATCCGAAAAGGGAACTGAAGTTAATCCGGAAAAAATAAGGGCAATTAGGGAATGACCGATTCCCACTAGTGTGCGGGAAGTTCGATGTTTCTTAGGACTCAATTGATACTATAGGAAGTTTGTGCAGAATTATGGCAGTATCGAAAGCCCTTTCACACAGCTTTTAAAGACAGGAACTTATTATGAAGGAGAATTGATAGTAGTAGTGTTTGCGGTGCAAAGGTGGAGACCATATTTGTTAGAGAAGAAATTTATAGTGAAAACTGATCAGAAGTCGCGCAAATTTCTGCTGGAACAAAGGGTGATTCAACCCTAATACCAGAAATGGATAGCCAAGCTTTTGGGATATTCATTTGAGGTAATCTACAATCCCGGATTGGAGAATAAGGCAGTCGATGCTCTATCTAGAACACCTCCTACTATGCACTTAAATCAAATATCAGCCTCAGCACTACTCAATTTAGTGGTGATTCAAGAAGAGGTAAAAAGGGATCAATACCTACAGGAAATCCAGAAGAAAATAGAAAGATAAAAAATTGGGAGTTCCAAACTTTTCAGTACAGTAAGGGGTATTGAAATACAAAGGAAGGTTGGTGCTGTCAAAAACATCTGTTCTACTACCCACTATCATGCATACCTATCATGATTTTTTCCTTGGAGGACATTCAGGGTTCCTAAGAACGTACAAGAGGATGACCGGAGAGATTTACTAGGAAGGAATGAAGAAAGACATAAAGAAATACTATGAAGAACGTCTTGTATGCCAAAGGAATAAAACACTTGCATTATCACCTGTCGGATTGCTGCTGCCACTTGAGATTCCTAACACAGTGTGGTCGGATATTTCCATGGATTTTATAGATGGACTTCCGAAATTAGCTGGAAAAGAAGTGATTTTTGTGGTTGTAGATCGTCTGAGTAAGTATGCACATTTTATAGCTATAAATCATCCTTACATGGGCAGCTTCGTAGCAGAAGTTTTTGTTAAAGAAGTGGTGAGATTGCACGGGTATCCCTAGTCAATTATATCGGATCGAGACAAAATCTTTATTAGTCATTTCTGAAAGGAAATGTTCAGGTTAGTGGGAACTAAAATGAATAGAAGGAAATGTTCAGTTTAGTGGGAACTAAGCCCATATGCACCAAGTTCGAATATAGAACTTGCTTCTTACTGAAAAAATAATGATTATGGGACTTGTTATAAGGGTATCCAATATTCGAAGTAAATGAATGATTACGAAATGATTGTTTCCTCAGTGTGAAGAAGAACAACAAAAAAGAAAAAAGGATAAAAATAAAAAAACAAACTTTCTCGATTATTGATGACCTAGGTAACTTAATCTTAATCCTGAGTTAACTATGAACTCCTGTTCACACGAGATTATCCTTAGATCTGCATAGGTGAGGGCAGCTCATCAGCGTTGGCCCAATAAGCCTCCAATTTCAGGGATAAGATTTAGATAGGTTGTTCTCTTAAGCACTGAATCCAAGTCTTGAACAAGGGGCCCCACCCTCTCATTGGCCCGAGAGGGATTAAGTTTATAGGTTGAACCTTAAACCAATTGTTCAATAGTGGATTAGTGGGACTTAAGGAGCAAGATGTAATCTTGGGGGTAAAACGGTATTTTGACCCAGCCAAGGTTACGAGCAACCTGTGAATGATTAACTTACTGATTATGGTTTTATCAAATGGACACAAATATATCTATAGTGAGGGGAGTGCAACTACGGGACTTTAGTGGAATGACCCGTTAGTTAACGAATGTTGATTAACTCGGTTTAAAAGAGTTTAGCTAGTTAATCTTGAATCGTTGGAGCCCATGATCTATAGGTCCATTAGGTTCCTCTGCTAGCTCATATGGATTAAGCTTAGAACAGTGTGATGAAATAAGTCGAATTGTTCGAATTGGGAGAAAAAAGAGAAACCGACAAATATAGTGATATAGTCGTCGGTCTTCTAATTAGAAATAGAGCTTTATGTTTTACATACTATAAGTATGAATGCATCAGATTCATACTAAGAAGCTCAGAATTGATGGAATTGGTAAAAAAATAGTCAAAAGTCGAAACCGACAAATATAGTGATATAGTCGTCGGTCTTCTAATTAGAAATAGAGCTTTATGTTTTACATACTATAAGTATGAATGCGGATTCATGCTCGGGAGGTTGGAATTAGTCAAGACGGACAAAATGGTAAAAAGTCGAAATATTGACTTTTGACTAAAAAAAGTCAAAGTTTGACTTTTGACTTAAAATATCTAATTACCATTTTACCCTTGGACTAAGTTAGTGGGATTATCCAACATTTTGTTGGATAATCCCACTGGGATATGTGGCTATATGAGATGTAGACACCTAGCCCACTAAGTTGTTATAATTGTTAGTGGAACATTAGGTGTTGAGATTTGGCAAATAAATTGCATGCATTTTAGTTTTCAAATGGTTGAAATTTTTTGCCTTTTTTAATATACTCCAATATCTCAACCAAGAAAAAAAAACTTCTACCTTCCAATTTCCTTTTATCTCCATTACTTTCTACATTAAATTGGGTCCTACAACTCGGTTCTTTGTCCAGAGGATAGTAGTTGAGCACTAGTGGTCGTCTCGGTTTGAATTGCTAAGGAGGTATCAAGTTTTTGAAAGCTTCAAAGGTAATATTTCCTAAAACCCTAATTTGATTAATTTAAGGTTACTTGTTAATTGTGGCAATGAGGGTAGAAATTCGATTCTTTTTCCGCTGTGCATGTCTTAGTTCTATCAGTAGGCGCACAACCAGGAGATGAAATTGATGAGAAACGAGATAAGCTAAATTTCGGCAATGGAAGAAATATTAGCCACGATCAGCGTACAGACAAAGAAGACTCACAAAATGTTGATAATGTTCATGGAATCTATTACTAGAAAGCGTACCGTTATGAGTGTGAAAATGGTCGAGTCGAGTGTACGAGAGACAATATCAACAACAACGAATAAGAAGGAAGGCCTGATCAACAAGGATCATGAGCACGACACAAAGGACGGAAAGATAGGAGGAGAAGACGGAGCGAACGAGCAGAATAAGTTCAAGAAGGTTCTTGGCCCTTCCAAGCAGATAGATATTTTCAGATACACAAATTGACCGATGCTGAGAAGGTGCTGGTTGCGACCATTAATTTTGAAGGCCCGATGTTGAACTAGTATAGGGCACAAGAAGAATGTGGCAAGTTTACTGGTTGATCGAACCTCAAGGAGAGAATACTCATCCGTTTTCAATCAGCAAGAGAGGGGTCCATATGCGGACAATTTCTGAGAATCGGATAACATACAATGGTAGAAGAATATCGAAACCAGTTATATAAGCTGATGGCGCCGTTATTCGATCTACAGGACAGGGTGGTGGAGGAAACATTCATGAACGGTTTACTTCCGTGGATTAAAGCAGAAGTGGATTTTTGTCGTTCGGTCGGCCTGGCTCAAATGGTGCACGCAGCTCAACTCGTAGAAAACCGAGAGATAATTCACAATGAGGCCAACCTTGAGGGGTACGCCCGAGGAAAATATCCGCCTCAAGGTTCTAGGCAAAATACGAGTGTCGCGACGGTGAACGATAGCGACAATAAGGGAAATACATTATTTCTGATGAGAACGATTACTCTAAGAACGACATCCGGAGAAGTTAAGAGAGGGGCAAGTAAAGCGATTGTCAGACGCGAAGTTTCAAGTCAGGAAGGAAAAAGGACTCTGTTTCCGTTGTAATGAGAAATATTCTCATGATCATCGATGCAAAAACAGAGGGTAGAGAGAGTTGAGAATGTACGTGGTCAGGGCGAATTATGAAGAATTTGAAATCATAGAAGAAGTGGAAGAAAATGATGCGGAGCTAAATTGTGTGCAGGGGAAAACCAAACTGTAGTGGAACTATCTATCATTTCAGTGGTAGGCCTATCCAATCCAGGAACAATGAAGGTGAAAGGATTGATACAGGAGAAAGAAGTTATAGTGTTGATAGACTGCAGAGCGACACATAACATCATCTCAGAAAAGTTGGTGAAGGAATTACAGTTGAATACGAAAGAGACATAATTATGGAGTCATATTAGGCTCAGGTATTGCGATTAAAGGAAAAGGTATTTGTGAGGCCGTAGAGTTGATGTTGGGGGAGTGGAAAGTGATGGAAAATTTGTTACCCTTAGAATTGGGAGGGGTAGATGTGTTAGGAATGCAGTAGTTGTATTCATTGGGCATGACAGAAGTAGATTGGAGGAACCTCACAATGACTTTTCTGCAACAAGGAGAAAAGGTAGTGATCAGAGGAGACCCAAGTTTGACCAAATCCAGAGTGAGTCTCAAGAACATGATCAAAACGTGGAAGGATTCGTGATCGAGTGTCGAGCAATGGAGAGAGTCTATGAGCCACAGGAAGATAACAGGATTGAAGAAGTATTAACTACTGATGAAGCAGTATAGGTCGTGTTGAAGAATTTTGAAGATGTTTCTAATTGGTCGGAGACACTACCCCCACAAAGAAATATTGAACATCACATTCATTTGAAACAGGGCACTGATCTGGTAAATGTTCGACCCTATAGATACGCTTATCAACAAAAAGCTGAGATGGACAAACTTGTGGATGAGATGTTGACAATGGGAATTATCCATCCCAGCAACAATCCATATCTAGTCCAGTCCTATTGGTAAGGAAAAAAGATGGCAACTGGCGTTTTTGCGTAGACTACCAAGCACTGAACAACGTAACCATTCCAGGTACGAGGATTACTAGGCCTCACCTGTTACTAAAGAAAGTTCGTTCAGCACTATGGCTTCATTGTCGCACCATTGACTCAACTACTTAGGAAAGGGGGATTCCAGTGGACTGAGGAGTCTAAGGAGGCATTCCAACAACTACAGAATGCCATGATGACCCTGCCCGTTTTGGTGTTGCCTGATTTCAATGCCACCTTTGAAATGGAAACAGATGCATCGAGATATAGGGTAGGAGTCGTACTCGTCCAAGCCAAGCGCCCCATAGCATACTTTAGCCATACGTTAGCCTTAAGAGATAGGGCCAAGCCTATATATGAAAGGGAATTAATGGCAGTAATCTTGCCTGTGCAACGATGGCGACCATATCTGTTGGAAAGAAAATTTATTGTGAAGACCGATCAGAAATCCTTGAAGTTCTTATTACAACAAAGAGTGATACAGCTTCAGTATCAGAAATGGGTAGCGAAGCTAACGGGATACTCATTTGAGGTGGTCTACAAACCCAACTTGGAGAATAAAGCAGCAGACGCCTTGTCTTGGATGCCTCCTACAGTTAACCTCGGTAGCATAACAGCTCCTACATTGGTTGACATTCTGGTGATTAAAAAGGAAGTCGAAGCGGATGAAAAGTTGAGCAAAATAATGGAAGAACTACAAGCAATGGAAGAAGGAACAGAGGGTAAATTCTCCATCCGACAAGGTATGTTAAGATATAAGGATAAGTTTGTGCTGTCCAAAACATCTACATTGATACCCACAATCCTACATACTTACCATGATTCGGTACTTGGAGACCATTCTGGATTTTTATGCACATACAAACGACCAACTGGTGAGCTATATTAGGAAGGAATGAAGGCGGATGTTAAGAAGTATTGTAAGGAATGTGTAATATGTCAGAAGAACAACTCCCTAGCACTATCCCCCACCCGACTGCTGCTGTCCCTGGACAGTCCAAACAATATTTGGAGCGATATATCTATGGACTTTATCGAGGGCTTACCAAGATCGAATGGTTTCGAAGTCATCTTTGTAGTGGTGGACAGATTCAGCAAATATATTTGTTAAGGAGATTGTCCGACTTCATGGCTTTCCCAAATCGATAGTGTCCGACCGAGATAAGGTATTCTTGAGCAACTTTTGGCAAGAAATGTTCAAAATGGCAGGCACCCGATTAAATCGAAGCACCGCTTATCACCCTCAGTCGGATGGGAAAACTGAGGTGGTTAATAGGGGAGTGGAGACGTATCTGCGATGTTTTTGTGGAGAACGGCCTAAGGAATGGTCAAAATGGATACATTGGGCTGAATATTGGTACAACACTACTTTTTAGAGATCCGTAGGGGTCACTCCATTTCAAGCTATCTATGGACGTATGCCACCACCCTTGATGTTTTATGGTGACCGGGACACTCCAAACACTACCTTAAACGAATAG

mRNA sequence

GGGTTGCGGTCAAAGGAAAAGGAATTTGCAGTAATGTTGAAGTCACGGTAGGAGAGTGGAAAATTACAAACAGCTTTTTACCCTTGGAGTTAGGAGGGGTTAATGTAATTTTGGGTATGCAGTGGTTGCACTCATTGGGCACGATTGAATTTGATTGGAAAAATTTAGGAAGGCTAGCTGAGGAAGGCTTAGAGGATGAAGAAGTGCCAGCCACTGTTGACAACATGATCTCTCCTCTGTTGAGCAAATTTAATGATGTTTTTGATTGGCTGGAAGAGCTGCCTCCGAAGAGGAACATTGAACACCATATACCCCTTAAGAAGGGGGTGGATCCAGTTAATGTCAGACCTTATCATTACCCACATCAGCAAAAGGAGGAAATGGAAAGACTAGTTGATGAAATGTTGAAGACAGGCATCATAAGACCGGGTACCAGTCCGTATTCCAGCCCAGTCCTTCTCGTGAAAAAGAAAGACGATAGCTGGCGATTTTGTATAGATTATCGGGAGTTGAACAATGTCACTATCCCAGATAAGTTTCCAATTCTGGTCATAGATGAGTTATTCAATGAGCTGAACGGGGCCAACATGTTTTCGAAGATTGATTTAAAGGTGGGTTATCACCAGATCAGGATGCATCCGAGAGGTGTAGAGAAGACGACCTTTCGAACACATGAGGGACACTATGAGTTCTTGGTCATGCCGTTTGGGCTAACCAATGCCCCCTCTACGTTCCAAGCATTAATGAACCACATCTTTAAGCCTTATATGAGTAGATTCGTATCCGTGTTTTTCGATGACGTTTTGGTGCACAGCAAGGGAGTAGAAGAACATGGACAACATCTGGAAGTAGTCTTGGAGATCCTTCGGGAGAATGAATTGTATGTGAATTTAGCCAAATGTTGCTTTGCCAAAGGTATAATAGGTTATTTGGGGCATTTCATATCCGAAAAGGGAACTGAATTCGTTCAGCACTATGGCTTCATTGTCGCACCATTGACTCAACTACTTAGGAAAGGGGGATTCCAGTGGACTGAGGAGTCTAAGGAGGCATTCCAACAACTACAGAATGCCATGATGACCCTGCCCGTTTTGGTGTTGCCTGATTTCAATGCCACCTTTGAAATGGAAACAGATGCATCGAGATATAGGGTAGGAGTCGTACTCGTCCAAGCCAAGCGCCCCATAGCATACTTTAGCCATACGTTAGCCTTAAGAGATAGGGCCAAGCCTATATATGAAAGGGAATTAATGGCAGTAATCTTGCCTGTGCAACGATGGCGACCATATCTGTTGGAAAGAAAATTTATTGTGAAGACCGATCAGAAATCCTTGAAGTTCTTATTACAACAAAGAGTGATACAGCTTCAGTATCAGAAATGGGTAGCGAAGCTAACGGGATACTCATTTGAGGTGGTCTACAAACCCAACTTGGAGAATAAAGCAGCAGACGCCTTGTCTTGGATGCCTCCTACAGTTAACCTCGGTAGCATAACAGCTCCTACATTGGTTGACATTCTGGTGATTAAAAAGGAAGTCGAAGCGGATGAAAAGTTGAGCAAAATAATGGAAGAACTACAAGCAATGGAAGAAGGAACAGAGGGTAAATTCTCCATCCGACAAGGTATGTTAAGATATAAGGATAAGTTTGTGCTGTCCAAAACATCTACATTGATACCCACAATCCTACATACTTACCATGATTCGAACAACTCCCTAGCACTATCCCCCACCCGACTGCTGCTGTCCCTGGACAGTCCAAACAATATTTGGAGCGATATATCTATGGACTTTATCGAGGGCTTACCAAGATCGAATGATTCAGCAAATATATTTGTTAAGGAGATTGTCCGACTTCATGGCTTTCCCAAATCGATAGTGTCCGACCGAGATAAGGTATTCTTGAGCAACTTTTGGCAAGAAATGTTCAAAATGGCAGGCACCCGATTAAATCGAAGCACCGCTTATCACCCTCAGTCGGATGGGAAAACTGAGAGATCCGTAGGGGTCACTCCATTTCAAGCTATCTATGGACGTATGCCACCACCCTTGATGTTTTATGGTGACCGGGACACTCCAAACACTACCTTAAACGAATAG

Coding sequence (CDS)

GTTGCGGTCAAAGGAAAAGGAATTTGCAGTAATGTTGAAGTCACGGTAGGAGAGTGGAAAATTACAAACAGCTTTTTACCCTTGGAGTTAGGAGGGGTTAATGTAATTTTGGGTATGCAGTGGTTGCACTCATTGGGCACGATTGAATTTGATTGGAAAAATTTAGGAAGGCTAGCTGAGGAAGGCTTAGAGGATGAAGAAGTGCCAGCCACTGTTGACAACATGATCTCTCCTCTGTTGAGCAAATTTAATGATGTTTTTGATTGGCTGGAAGAGCTGCCTCCGAAGAGGAACATTGAACACCATATACCCCTTAAGAAGGGGGTGGATCCAGTTAATGTCAGACCTTATCATTACCCACATCAGCAAAAGGAGGAAATGGAAAGACTAGTTGATGAAATGTTGAAGACAGGCATCATAAGACCGGGTACCAGTCCGTATTCCAGCCCAGTCCTTCTCGTGAAAAAGAAAGACGATAGCTGGCGATTTTGTATAGATTATCGGGAGTTGAACAATGTCACTATCCCAGATAAGTTTCCAATTCTGGTCATAGATGAGTTATTCAATGAGCTGAACGGGGCCAACATGTTTTCGAAGATTGATTTAAAGGTGGGTTATCACCAGATCAGGATGCATCCGAGAGGTGTAGAGAAGACGACCTTTCGAACACATGAGGGACACTATGAGTTCTTGGTCATGCCGTTTGGGCTAACCAATGCCCCCTCTACGTTCCAAGCATTAATGAACCACATCTTTAAGCCTTATATGAGTAGATTCGTATCCGTGTTTTTCGATGACGTTTTGGTGCACAGCAAGGGAGTAGAAGAACATGGACAACATCTGGAAGTAGTCTTGGAGATCCTTCGGGAGAATGAATTGTATGTGAATTTAGCCAAATGTTGCTTTGCCAAAGGTATAATAGGTTATTTGGGGCATTTCATATCCGAAAAGGGAACTGAATTCGTTCAGCACTATGGCTTCATTGTCGCACCATTGACTCAACTACTTAGGAAAGGGGGATTCCAGTGGACTGAGGAGTCTAAGGAGGCATTCCAACAACTACAGAATGCCATGATGACCCTGCCCGTTTTGGTGTTGCCTGATTTCAATGCCACCTTTGAAATGGAAACAGATGCATCGAGATATAGGGTAGGAGTCGTACTCGTCCAAGCCAAGCGCCCCATAGCATACTTTAGCCATACGTTAGCCTTAAGAGATAGGGCCAAGCCTATATATGAAAGGGAATTAATGGCAGTAATCTTGCCTGTGCAACGATGGCGACCATATCTGTTGGAAAGAAAATTTATTGTGAAGACCGATCAGAAATCCTTGAAGTTCTTATTACAACAAAGAGTGATACAGCTTCAGTATCAGAAATGGGTAGCGAAGCTAACGGGATACTCATTTGAGGTGGTCTACAAACCCAACTTGGAGAATAAAGCAGCAGACGCCTTGTCTTGGATGCCTCCTACAGTTAACCTCGGTAGCATAACAGCTCCTACATTGGTTGACATTCTGGTGATTAAAAAGGAAGTCGAAGCGGATGAAAAGTTGAGCAAAATAATGGAAGAACTACAAGCAATGGAAGAAGGAACAGAGGGTAAATTCTCCATCCGACAAGGTATGTTAAGATATAAGGATAAGTTTGTGCTGTCCAAAACATCTACATTGATACCCACAATCCTACATACTTACCATGATTCGAACAACTCCCTAGCACTATCCCCCACCCGACTGCTGCTGTCCCTGGACAGTCCAAACAATATTTGGAGCGATATATCTATGGACTTTATCGAGGGCTTACCAAGATCGAATGATTCAGCAAATATATTTGTTAAGGAGATTGTCCGACTTCATGGCTTTCCCAAATCGATAGTGTCCGACCGAGATAAGGTATTCTTGAGCAACTTTTGGCAAGAAATGTTCAAAATGGCAGGCACCCGATTAAATCGAAGCACCGCTTATCACCCTCAGTCGGATGGGAAAACTGAGAGATCCGTAGGGGTCACTCCATTTCAAGCTATCTATGGACGTATGCCACCACCCTTGATGTTTTATGGTGACCGGGACACTCCAAACACTACCTTAAACGAATAG

Protein sequence

VAVKGKGICSNVEVTVGEWKITNSFLPLELGGVNVILGMQWLHSLGTIEFDWKNLGRLAEEGLEDEEVPATVDNMISPLLSKFNDVFDWLEELPPKRNIEHHIPLKKGVDPVNVRPYHYPHQQKEEMERLVDEMLKTGIIRPGTSPYSSPVLLVKKKDDSWRFCIDYRELNNVTIPDKFPILVIDELFNELNGANMFSKIDLKVGYHQIRMHPRGVEKTTFRTHEGHYEFLVMPFGLTNAPSTFQALMNHIFKPYMSRFVSVFFDDVLVHSKGVEEHGQHLEVVLEILRENELYVNLAKCCFAKGIIGYLGHFISEKGTEFVQHYGFIVAPLTQLLRKGGFQWTEESKEAFQQLQNAMMTLPVLVLPDFNATFEMETDASRYRVGVVLVQAKRPIAYFSHTLALRDRAKPIYERELMAVILPVQRWRPYLLERKFIVKTDQKSLKFLLQQRVIQLQYQKWVAKLTGYSFEVVYKPNLENKAADALSWMPPTVNLGSITAPTLVDILVIKKEVEADEKLSKIMEELQAMEEGTEGKFSIRQGMLRYKDKFVLSKTSTLIPTILHTYHDSNNSLALSPTRLLLSLDSPNNIWSDISMDFIEGLPRSNDSANIFVKEIVRLHGFPKSIVSDRDKVFLSNFWQEMFKMAGTRLNRSTAYHPQSDGKTERSVGVTPFQAIYGRMPPPLMFYGDRDTPNTTLNE*

Homology

[Close]

BLAST of CSPI07G08960 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 283.1 bits (723), Expect = 8.5e-75
Identity = 207/709 (29.20%), Postives = 318/709 (44.85%), Query Frame = 0


Query: 92   ELPPKR------NIEHHIPLKKGVDPVNVRPYHYPHQQKEEMERLVDEMLKTGIIRPGTS 151
            +LPP+        ++H I +K G     ++PYH   + ++E+ ++V ++L    I P  S
Sbjct: 571  DLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKS 630

Query: 152  PYSSPVLLVKKKDDSWRFCIDYRELNNVTIPDKFPILVIDELFNELNGANMFSKIDLKVG 211
            P SSPV+LV KKD ++R C+DYR LN  TI D FP+  ID L + +  A +F+ +DL  G
Sbjct: 631  PCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSG 690

Query: 212  YHQIRMHPRGVEKTTFRTHEGHYEFLVMPFGLTNAPSTFQALMNHIFKPYMSRFVSVFFD 271
            YHQI M P+   KT F T  G YE+ VMPFGL NAPSTF   M   F+    RFV+V+ D
Sbjct: 691  YHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLD 750

Query: 272  DVLVHSKGVEEHGQHLEVVLEILRENELYVNLAKCCFAKGIIGYLGHFISEKGTEFVQH- 331
            D+L+ S+  EEH +HL+ VLE L+   L V   KC FA     +LG+ I  +    +QH 
Sbjct: 751  DILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHK 810

Query: 332  -------------------YGFI------------VAPLTQLLRKGGFQWTEESKEAFQQ 391
                                G I            +A   QL      QWTE+  +A  +
Sbjct: 811  CAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQWTEKQDKAIDK 870

Query: 392  LQNAMMTLPVLVLPDFNATFEMETDASRYRVGVVLVQAKRP------IAYFSHTLALRDR 451
            L++A+   PVLV  +  A + + TDAS+  +G VL +          + YFS +L    +
Sbjct: 871  LKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQK 930

Query: 452  AKPIYERELMAVILPVQRWRPYLLERKFIVKTDQKSLKFLLQQRVIQLQYQKWVAKLTGY 511
              P  E EL+ +I  +  +R  L  + F ++TD  SL  L  +     + Q+W+  L  Y
Sbjct: 931  NYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATY 990

Query: 512  SFEVVYKPNLENKAADALSWMPPTVNLGSI-------------TAPTLVDILVIKKEVEA 571
             F + Y    +N  ADA+S    T+   +              + P    +L+  KE+  
Sbjct: 991  DFTLEYLAGPKNVVADAISRAVYTITPETSRPIDTESWKSYYKSDPLCSAVLIHMKELTQ 1050

Query: 572  DEKLSKIMEELQAMEEGTE------GKFSIRQGMLRYKDKFVLSKTSTLIPTILHTYHDS 631
                 + M   ++ ++  E        +S+   M+ Y+D+ V+         ++  YHD 
Sbjct: 1051 HNVTPEDMSAFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVPIKQQ--NAVMRLYHDH 1110

Query: 632  N----------NSLALSPT-------------------------------RLLLSLDSPN 668
                           +SP                                 LL  L    
Sbjct: 1111 TLFGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAE 1170

[Close]

BLAST of CSPI07G08960 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 282.3 bits (721), Expect = 1.5e-74
Identity = 207/709 (29.20%), Postives = 318/709 (44.85%), Query Frame = 0


Query: 92   ELPPKR------NIEHHIPLKKGVDPVNVRPYHYPHQQKEEMERLVDEMLKTGIIRPGTS 151
            +LPP+        ++H I +K G     ++PYH   + ++E+ ++V ++L    I P  S
Sbjct: 597  DLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKS 656

Query: 152  PYSSPVLLVKKKDDSWRFCIDYRELNNVTIPDKFPILVIDELFNELNGANMFSKIDLKVG 211
            P SSPV+LV KKD ++R C+DYR LN  TI D FP+  ID L + +  A +F+ +DL  G
Sbjct: 657  PCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSG 716

Query: 212  YHQIRMHPRGVEKTTFRTHEGHYEFLVMPFGLTNAPSTFQALMNHIFKPYMSRFVSVFFD 271
            YHQI M P+   KT F T  G YE+ VMPFGL NAPSTF   M   F+    RFV+V+ D
Sbjct: 717  YHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLD 776

Query: 272  DVLVHSKGVEEHGQHLEVVLEILRENELYVNLAKCCFAKGIIGYLGHFISEKGTEFVQH- 331
            D+L+ S+  EEH +HL+ VLE L+   L V   KC FA     +LG+ I  +    +QH 
Sbjct: 777  DILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHK 836

Query: 332  -------------------YGFI------------VAPLTQLLRKGGFQWTEESKEAFQQ 391
                                G I            +A   QL      QWTE+  +A ++
Sbjct: 837  CAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQWTEKQDKAIEK 896

Query: 392  LQNAMMTLPVLVLPDFNATFEMETDASRYRVGVVLVQAKRP------IAYFSHTLALRDR 451
            L+ A+   PVLV  +  A + + TDAS+  +G VL +          + YFS +L    +
Sbjct: 897  LKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQK 956

Query: 452  AKPIYERELMAVILPVQRWRPYLLERKFIVKTDQKSLKFLLQQRVIQLQYQKWVAKLTGY 511
              P  E EL+ +I  +  +R  L  + F ++TD  SL  L  +     + Q+W+  L  Y
Sbjct: 957  NYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATY 1016

Query: 512  SFEVVYKPNLENKAADALSWMPPTVNLGSI-------------TAPTLVDILVIKKEVEA 571
             F + Y    +N  ADA+S    T+   +              + P    +L+  KE+  
Sbjct: 1017 DFTLEYLAGPKNVVADAISRAIYTITPETSRPIDTESWKSYYKSDPLCSAVLIHMKELTQ 1076

Query: 572  DEKLSKIMEELQAMEEGTE------GKFSIRQGMLRYKDKFVLSKTSTLIPTILHTYHDS 631
                 + M   ++ ++  E        +S+   M+ Y+D+ V+         ++  YHD 
Sbjct: 1077 HNVTPEDMSAFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVPIKQQ--NAVMRLYHDH 1136

Query: 632  N----------NSLALSPT-------------------------------RLLLSLDSPN 668
                           +SP                                 LL  L    
Sbjct: 1137 TLFGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAE 1196

[Close]

BLAST of CSPI07G08960 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.0e-68
Identity = 155/455 (34.07%), Postives = 235/455 (51.65%), Query Frame = 0


Query: 79  LLSKFNDV-------FDWLEELPPKRNIEHHIPLKKGVDPVNVRPYHYPHQQKEEMERLV 138
           LL K++D+         +  +     N +H++PL           Y YP   ++E+E  +
Sbjct: 176 LLQKYHDIQYHEGDKLTFTNQTKHTINTKHNLPL--------YSKYSYPQAYEQEVESQI 235

Query: 139 DEMLKTGIIRPGTSPYSSPVLLVKKKDDS-----WRFCIDYRELNNVTIPDKFPILVIDE 198
            +ML  GIIR   SPY+SP+ +V KK D+     +R  IDYR+LN +T+ D+ PI  +DE
Sbjct: 236 QDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDE 295

Query: 199 LFNELNGANMFSKIDLKVGYHQIRMHPRGVEKTTFRTHEGHYEFLVMPFGLTNAPSTFQA 258
           +  +L   N F+ IDL  G+HQI M P  V KT F T  GHYE+L MPFGL NAP+TFQ 
Sbjct: 296 ILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQR 355

Query: 259 LMNHIFKPYMSRFVSVFFDDVLVHSKGVEEHGQHLEVVLEILRENELYVNLAKCCFAKGI 318
            MN I +P +++   V+ DD++V S  ++EH Q L +V E L +  L + L KC F K  
Sbjct: 356 CMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQE 415

Query: 319 IGYLGHFISEKG---------------------------------TEFVQHYGFIVAPLT 378
             +LGH ++  G                                  +F+ ++  I  P+T
Sbjct: 416 TTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMT 475

Query: 379 QLLRKGGFQWT--EESKEAFQQLQNAMMTLPVLVLPDFNATFEMETDASRYRVGVVLVQA 438
           + L+K     T   E   AF++L+  +   P+L +PDF   F + TDAS   +G VL Q 
Sbjct: 476 KCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQD 535

Query: 439 KRPIAYFSHTLALRDRAKPIYERELMAVILPVQRWRPYLLERKFIVKTDQKSLKFLLQQR 487
             P++Y S TL   +      E+EL+A++   + +R YLL R F + +D + L +L + +
Sbjct: 536 GHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPLSWLYRMK 595

[Close]

BLAST of CSPI07G08960 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 5.9e-68
Identity = 153/449 (34.08%), Postives = 237/449 (52.78%), Query Frame = 0


Query: 79  LLSKFNDV-FDWLEELPPKRNIEHHIPLKKGVDPVNVRPYHYPHQQKEEMERLVDEMLKT 138
           LL+KF ++ +   E+L     I+H +       P+  + Y      + E+E  V EML  
Sbjct: 174 LLNKFRNLEYKEGEKLTFTNTIKHVLNTTHN-SPIYSKQYPLAQTHEIEVENQVQEMLNQ 233

Query: 139 GIIRPGTSPYSSPVLLVKKKDDS-----WRFCIDYRELNNVTIPDKFPILVIDELFNELN 198
           G+IR   SPY+SP  +V KK D+     +R  IDYR+LN +TIPD++PI  +DE+  +L 
Sbjct: 234 GLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLG 293

Query: 199 GANMFSKIDLKVGYHQIRMHPRGVEKTTFRTHEGHYEFLVMPFGLTNAPSTFQALMNHIF 258
               F+ IDL  G+HQI M    + KT F T  GHYE+L MPFGL NAP+TFQ  MN+I 
Sbjct: 294 KCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNIL 353

Query: 259 KPYMSRFVSVFFDDVLVHSKGVEEHGQHLEVVLEILRENELYVNLAKCCFAKGIIGYLGH 318
           +P +++   V+ DD+++ S  + EH   +++V   L +  L + L KC F K    +LGH
Sbjct: 354 RPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGH 413

Query: 319 FISEKG---------------------------------TEFVQHYGFIVAPLTQLLRKG 378
            ++  G                                  +F+ +Y  I  P+T  L+K 
Sbjct: 414 IVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKR 473

Query: 379 GFQWTE--ESKEAFQQLQNAMMTLPVLVLPDFNATFEMETDASRYRVGVVLVQAKRPIAY 438
               T+  E  EAF++L+  ++  P+L LPDF   F + TDAS   +G VL Q   PI++
Sbjct: 474 TKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNGHPISF 533

Query: 439 FSHTLALRDRAKPIYERELMAVILPVQRWRPYLLERKFIVKTDQKSLKFLLQQRVIQLQY 487
            S TL   +      E+EL+A++   + +R YLL R+F++ +D + L++L   +    + 
Sbjct: 534 ISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKL 593

[Close]

BLAST of CSPI07G08960 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 5.5e-66
Identity = 155/487 (31.83%), Postives = 240/487 (49.28%), Query Frame = 0


Query: 67  EVPATVDNMISPLLSKFNDVFDWLEELPPKRNIEHHIPLKKGV-----DPVNVRPYHYPH 126
           E P     +++ LL +F  +F+     PP   +     +K  +     DP+  + Y YP 
Sbjct: 79  EHPDGTQEILNSLLGEFPRIFE-----PPLSGMSVETAVKAEIRTNTQDPIYAKSYPYPV 138

Query: 127 QQKEEMERLVDEMLKTGIIRPGTSPYSSPVLLVKKK-----DDSWRFCIDYRELNNVTIP 186
             + E+ER +DE+L+ GIIRP  SPY+SP+ +V KK     +  +R  +D++ LN VTIP
Sbjct: 139 NMRGEVERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIP 198

Query: 187 DKFPILVIDELFNELNGANMFSKIDLKVGYHQIRMHPRGVEKTTFRTHEGHYEFLVMPFG 246
           D +PI  I+     L  A  F+ +DL  G+HQI M    + KT F T  G YEFL +PFG
Sbjct: 199 DTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFG 258

Query: 247 LTNAPSTFQALMNHIFKPYMSRFVSVFFDDVLVHSKGVEEHGQHLEVVLEILRENELYVN 306
           L NAP+ FQ +++ I + ++ +   V+ DD++V S+  + H ++L +VL  L +  L VN
Sbjct: 259 LKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVN 318

Query: 307 LAKCCFAKGIIGYLGHFISEKG---------------------------------TEFVQ 366
           L K  F    + +LG+ ++  G                                  +F+Q
Sbjct: 319 LEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQ 378

Query: 367 HYGFIVAPLTQLLR------------KGGFQWTEESKEAFQQLQNAMMTLPVLVLPDFNA 426
            Y  +  PLT L R            K      E + ++F  L++ + +  +L  P F  
Sbjct: 379 DYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTK 438

Query: 427 TFEMETDASRYRVGVVLVQ----AKRPIAYFSHTLALRDRAKPIYERELMAVILPVQRWR 486
            F + TDAS + +G VL Q      RPIAY S +L   +      E+E++A+I  +   R
Sbjct: 439 PFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLR 498

Query: 487 PYLLERKFI-VKTDQKSLKFLLQQRVIQLQYQKWVAKLTGYSFEVVYKPNLENKAADALS 494
            YL     I V TD + L F L  R    + ++W A++  Y+ E++YKP   N  ADALS
Sbjct: 499 AYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIEEYNCELIYKPGKSNVVADALS 558

[Close]

BLAST of CSPI07G08960 vs. ExPASy TrEMBL
Match: A0A5A7SIV7 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold124G00310 PE=4 SV=1)

HSP 1 Score: 918.7 bits (2373), Expect = 1.5e-263
Identity = 483/884 (54.64%), Postives = 588/884 (66.52%), Query Frame = 0


Query: 2    AVKGKGICSNVEVTVGEWKITNSFLPLELGGVNVILGMQWLHSLGTIEFDWKNL------ 61
            ++KGKG+C  VE+ +G  K+T+SFLPLELGGV+ ILGMQWLHS+GT E DWKNL      
Sbjct: 785  SIKGKGVCDKVELWLGNCKVTDSFLPLELGGVDAILGMQWLHSIGTTEVDWKNLILTFFE 844

Query: 62   --------------------------------GRLAE------EGLEDEEVPA----TVD 121
                                            G L E      EG+ED EV      T  
Sbjct: 845  HGNKVTIKGDPSLTKTQISLKGMIKSWDTEDQGYLVECRTLEKEGMEDREVDTQITETEG 904

Query: 122  NMISPLLSKFNDVFDWLEELPPKRNIEHHIPLKKGVDPVNVRPYHYPHQQKEEMERLVDE 181
              ++ +L+KF DVF+    LPP+R IEHHI LK+G DPVNVRPY Y HQQKEEMERLVDE
Sbjct: 905  GRMTAILNKFRDVFERPNRLPPQRGIEHHIYLKQGADPVNVRPYRYAHQQKEEMERLVDE 964

Query: 182  MLKTGIIRPGTSPYSSPVLLVKKKDDSWRFCIDYRELNNVTIPDKFPILVIDELFNELNG 241
            ML +GIIRP TSPYSSPVLLV+K+D SWRFC+DYR LNNVT+PDKFPI V++ELF+ELNG
Sbjct: 965  MLSSGIIRPSTSPYSSPVLLVRKRDGSWRFCVDYRALNNVTVPDKFPIPVVEELFDELNG 1024

Query: 242  ANMFSKIDLKVGYHQIRMHPRGVEKTTFRTHEGHYEFLVMPFGLTNAPSTFQALMNHIFK 301
            A++FSKIDLK GYHQIRMHP  +EKT FRTHEGHYEF+VMPFGLTNAPSTFQALMN +FK
Sbjct: 1025 ADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTFQALMNQVFK 1084

Query: 302  PYMSRFVSVFFDDVLVHSKGVEEHGQHLEVVLEILRENELYVNLAKCCFAKGIIGYLGHF 361
            P++ RFV VFFDD+L++SKG+EEHGQHLEVVLEILRE+ELY NL KC FAK  I YLGH+
Sbjct: 1085 PFLRRFVLVFFDDILIYSKGMEEHGQHLEVVLEILRESELYANLDKCHFAKTRISYLGHY 1144

Query: 362  ISEKGTE---------------------------------FVQHYGFIVAPLTQLLRKGG 421
            IS+KG E                                 FVQ+YG I APLTQLL+ G 
Sbjct: 1145 ISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLTQLLKSGA 1204

Query: 422  FQWTEESKEAFQQLQNAMMTLPVLVLPDFNATFEMETDASRYRVGVVLVQAKRPIAYFSH 481
            ++WTEE++ AF++L+ AMMTLPVL +PDFN  FE+E+DAS + VG VLVQ K+P+AYFS 
Sbjct: 1205 YKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKKPVAYFSK 1264

Query: 482  TLALRDRAKPIYERELMAVILPVQRWRPYLLERKFIVKTDQKSLKFLLQQRVIQLQYQKW 541
             L+ RDRA+P+YERELMAV+  VQRWRPYLL RKF VKTDQ+SLKFLL+QRVIQ QYQ+W
Sbjct: 1265 VLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQW 1324

Query: 542  VAKLTGYSFEVVYKPNLENKAADALSWMPPTVNLGSITAPTLVDILVIKKEVEADEKLSK 601
            +AKL GYSFEV+YKP LENKAADALS + PT +L  +TAP L+D+ VI+KEV  D  L +
Sbjct: 1325 IAKLLGYSFEVLYKPGLENKAADALSRIGPTAHLNQLTAPALLDVEVIQKEVRKDPALRE 1384

Query: 602  IMEELQAMEEGTE-GKFSIRQGMLRYKDKFVLSKTSTLIPTILHTYHDS----------- 661
            I+  ++  E+G E   ++  QG+L++K + VLSK STLIPTI+HTYHDS           
Sbjct: 1385 ILSMIE--EQGIEIPHYTCHQGILKFKGRLVLSKASTLIPTIMHTYHDSVFGGHSGFLRT 1444

Query: 662  -----------------------------NNSLALSPTRLLLSLDSPNNIWSDISMDFIE 699
                                         N S ALSP  LLL L+ P+ IWSDISMDFIE
Sbjct: 1445 YKRMAGELYWKGMKKDVQKYCEECMICQKNKSSALSPAGLLLPLEIPDAIWSDISMDFIE 1504

[Close]

BLAST of CSPI07G08960 vs. ExPASy TrEMBL
Match: A0A5D3CXB1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G001180 PE=4 SV=1)

HSP 1 Score: 918.3 bits (2372), Expect = 1.9e-263
Identity = 483/884 (54.64%), Postives = 587/884 (66.40%), Query Frame = 0


Query: 2    AVKGKGICSNVEVTVGEWKITNSFLPLELGGVNVILGMQWLHSLGTIEFDWKNL------ 61
            ++KGKG+C  VE+ +G  K+T+SFLPLELGGV+ ILGMQWLHS+GT E DWKNL      
Sbjct: 525  SIKGKGVCDKVELWLGNCKVTDSFLPLELGGVDAILGMQWLHSIGTTEVDWKNLILTFFE 584

Query: 62   --------------------------------GRLAE------EGLEDEEVPA----TVD 121
                                            G L E      EG+ED EV      T  
Sbjct: 585  HGNKVTIKGDPSLTKTQISLKGMIKSWDTEDQGYLVECRTLEKEGMEDREVDTQITETEG 644

Query: 122  NMISPLLSKFNDVFDWLEELPPKRNIEHHIPLKKGVDPVNVRPYHYPHQQKEEMERLVDE 181
              ++ +L+KF DVF+    LPP+R IEHHI LK+G DPVNVRPY Y HQQKEEMERLVDE
Sbjct: 645  GRMTAILNKFRDVFERPNRLPPQRGIEHHIYLKQGADPVNVRPYRYAHQQKEEMERLVDE 704

Query: 182  MLKTGIIRPGTSPYSSPVLLVKKKDDSWRFCIDYRELNNVTIPDKFPILVIDELFNELNG 241
            ML +GIIRP TSPYSSPVLLV+KKD SWRFC+DYR LNNVT+PDKFPI V++ELF+ELNG
Sbjct: 705  MLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEELFDELNG 764

Query: 242  ANMFSKIDLKVGYHQIRMHPRGVEKTTFRTHEGHYEFLVMPFGLTNAPSTFQALMNHIFK 301
            A++FSKIDLK GYHQIRMHP  +EKT FRTHEGHYEF+VMPFGLTNAPSTFQALMN +FK
Sbjct: 765  ADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTFQALMNQVFK 824

Query: 302  PYMSRFVSVFFDDVLVHSKGVEEHGQHLEVVLEILRENELYVNLAKCCFAKGIIGYLGHF 361
            P++ RFV VFFDD+L++SKG+EEHGQHLEVVLEILRE+ELY N  KC FAK  I YLGH+
Sbjct: 825  PFLRRFVLVFFDDILIYSKGMEEHGQHLEVVLEILRESELYANFDKCHFAKTRISYLGHY 884

Query: 362  ISEKGTE---------------------------------FVQHYGFIVAPLTQLLRKGG 421
            IS+KG E                                 FVQ+YG I APLTQLL+ G 
Sbjct: 885  ISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLTQLLKSGA 944

Query: 422  FQWTEESKEAFQQLQNAMMTLPVLVLPDFNATFEMETDASRYRVGVVLVQAKRPIAYFSH 481
            ++WTEE++ AF++L+ AMMTLPVL +PDFN  FE+E+DAS + VG VLVQ K+P+AYFS 
Sbjct: 945  YKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKKPVAYFSK 1004

Query: 482  TLALRDRAKPIYERELMAVILPVQRWRPYLLERKFIVKTDQKSLKFLLQQRVIQLQYQKW 541
             L+ RDRA+P+YERELMAV+  VQRWRPYLL RKF VKTDQ+SLKFLL+QRVIQ QYQ+W
Sbjct: 1005 VLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQW 1064

Query: 542  VAKLTGYSFEVVYKPNLENKAADALSWMPPTVNLGSITAPTLVDILVIKKEVEADEKLSK 601
            +AKL GYSFEV+YKP LENKAADALS + PT +L  +TAP L+D+ VI+KEV  D  L +
Sbjct: 1065 IAKLLGYSFEVLYKPGLENKAADALSRIGPTAHLNQLTAPALLDVEVIQKEVRKDPALRE 1124

Query: 602  IMEELQAMEEGTE-GKFSIRQGMLRYKDKFVLSKTSTLIPTILHTYHDS----------- 661
            I+  ++  E+G E   ++  QG+L++K + VLSK STLIPTI+HTYHDS           
Sbjct: 1125 ILSMIE--EQGIEIPHYTCHQGILKFKGRLVLSKASTLIPTIMHTYHDSVFGGHSGFLRT 1184

Query: 662  -----------------------------NNSLALSPTRLLLSLDSPNNIWSDISMDFIE 699
                                         N S ALSP  LLL L+ P+ IWSDISMDFIE
Sbjct: 1185 YKRMAGELYWKGMKKDVQKYCEECMICQKNKSSALSPAGLLLPLEIPDAIWSDISMDFIE 1244

[Close]

BLAST of CSPI07G08960 vs. ExPASy TrEMBL
Match: A0A5D3DI73 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00700 PE=4 SV=1)

HSP 1 Score: 918.3 bits (2372), Expect = 1.9e-263
Identity = 483/884 (54.64%), Postives = 587/884 (66.40%), Query Frame = 0


Query: 2    AVKGKGICSNVEVTVGEWKITNSFLPLELGGVNVILGMQWLHSLGTIEFDWKNL------ 61
            ++KGKG+C  VE+ +G  K+T+SFLPLELGGV+ ILGMQWLHS+GT E DWKNL      
Sbjct: 465  SIKGKGVCDKVELWLGNCKVTDSFLPLELGGVDAILGMQWLHSIGTTEVDWKNLILTFFE 524

Query: 62   --------------------------------GRLAE------EGLEDEEVPA----TVD 121
                                            G L E      EG+ED EV      T  
Sbjct: 525  HGNKVTIKGDPSLTKTQISLKGMIKSWDTEDQGYLVECRTLEKEGMEDREVDTQITETEG 584

Query: 122  NMISPLLSKFNDVFDWLEELPPKRNIEHHIPLKKGVDPVNVRPYHYPHQQKEEMERLVDE 181
              ++ +L+KF DVF+    LPP+R IEHHI LK+G DPVNVRPY Y HQQKEEMERLVDE
Sbjct: 585  GRMTAILNKFRDVFERPNRLPPQRGIEHHIYLKQGADPVNVRPYRYAHQQKEEMERLVDE 644

Query: 182  MLKTGIIRPGTSPYSSPVLLVKKKDDSWRFCIDYRELNNVTIPDKFPILVIDELFNELNG 241
            ML +GIIRP TSPYSSPVLLV+KKD SWRFC+DYR LNNVT+PDKFPI V++ELF+ELNG
Sbjct: 645  MLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEELFDELNG 704

Query: 242  ANMFSKIDLKVGYHQIRMHPRGVEKTTFRTHEGHYEFLVMPFGLTNAPSTFQALMNHIFK 301
            A++FSKIDLK GYHQIRMHP  +EKT FRTHEGHYEF+VMPFGLTNAPSTFQALMN +FK
Sbjct: 705  ADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTFQALMNQVFK 764

Query: 302  PYMSRFVSVFFDDVLVHSKGVEEHGQHLEVVLEILRENELYVNLAKCCFAKGIIGYLGHF 361
            P++ RFV VFFDD+L++SKG+EEHGQHLEVVLEILRE+ELY N  KC FAK  I YLGH+
Sbjct: 765  PFLRRFVLVFFDDILIYSKGMEEHGQHLEVVLEILRESELYANFDKCHFAKTRISYLGHY 824

Query: 362  ISEKGTE---------------------------------FVQHYGFIVAPLTQLLRKGG 421
            IS+KG E                                 FVQ+YG I APLTQLL+ G 
Sbjct: 825  ISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLTQLLKSGA 884

Query: 422  FQWTEESKEAFQQLQNAMMTLPVLVLPDFNATFEMETDASRYRVGVVLVQAKRPIAYFSH 481
            ++WTEE++ AF++L+ AMMTLPVL +PDFN  FE+E+DAS + VG VLVQ K+P+AYFS 
Sbjct: 885  YKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKKPVAYFSK 944

Query: 482  TLALRDRAKPIYERELMAVILPVQRWRPYLLERKFIVKTDQKSLKFLLQQRVIQLQYQKW 541
             L+ RDRA+P+YERELMAV+  VQRWRPYLL RKF VKTDQ+SLKFLL+QRVIQ QYQ+W
Sbjct: 945  VLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQW 1004

Query: 542  VAKLTGYSFEVVYKPNLENKAADALSWMPPTVNLGSITAPTLVDILVIKKEVEADEKLSK 601
            +AKL GYSFEV+YKP LENKAADALS + PT +L  +TAP L+D+ VI+KEV  D  L +
Sbjct: 1005 IAKLLGYSFEVLYKPGLENKAADALSRIGPTAHLNQLTAPALLDVEVIQKEVRKDPALRE 1064

Query: 602  IMEELQAMEEGTE-GKFSIRQGMLRYKDKFVLSKTSTLIPTILHTYHDS----------- 661
            I+  ++  E+G E   ++  QG+L++K + VLSK STLIPTI+HTYHDS           
Sbjct: 1065 ILSMIE--EQGIEIPHYTCHQGILKFKGRLVLSKASTLIPTIMHTYHDSVFGGHSGFLRT 1124

Query: 662  -----------------------------NNSLALSPTRLLLSLDSPNNIWSDISMDFIE 699
                                         N S ALSP  LLL L+ P+ IWSDISMDFIE
Sbjct: 1125 YKRMAGELYWKGMKKDVQKYCEECMICQKNKSSALSPAGLLLPLEIPDAIWSDISMDFIE 1184

[Close]

BLAST of CSPI07G08960 vs. ExPASy TrEMBL
Match: A0A5A7U6J3 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G001310 PE=4 SV=1)

HSP 1 Score: 918.3 bits (2372), Expect = 1.9e-263
Identity = 483/884 (54.64%), Postives = 587/884 (66.40%), Query Frame = 0


Query: 2    AVKGKGICSNVEVTVGEWKITNSFLPLELGGVNVILGMQWLHSLGTIEFDWKNL------ 61
            ++KGKG+C  VE+ +G  K+T+SFLPLELGGV+ ILGMQWLHS+GT E DWKNL      
Sbjct: 465  SIKGKGVCDKVELWLGNCKVTDSFLPLELGGVDAILGMQWLHSIGTTEVDWKNLILTFFE 524

Query: 62   --------------------------------GRLAE------EGLEDEEVPA----TVD 121
                                            G L E      EG+ED EV      T  
Sbjct: 525  HGNKVTIKGDPSLTKTQISLKGMIKSWDTEDQGYLVECRTLEKEGMEDREVDTQITETEG 584

Query: 122  NMISPLLSKFNDVFDWLEELPPKRNIEHHIPLKKGVDPVNVRPYHYPHQQKEEMERLVDE 181
              ++ +L+KF DVF+    LPP+R IEHHI LK+G DPVNVRPY Y HQQKEEMERLVDE
Sbjct: 585  GRMTAILNKFRDVFERPNRLPPQRGIEHHIYLKQGADPVNVRPYRYAHQQKEEMERLVDE 644

Query: 182  MLKTGIIRPGTSPYSSPVLLVKKKDDSWRFCIDYRELNNVTIPDKFPILVIDELFNELNG 241
            ML +GIIRP TSPYSSPVLLV+KKD SWRFC+DYR LNNVT+PDKFPI V++ELF+ELNG
Sbjct: 645  MLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEELFDELNG 704

Query: 242  ANMFSKIDLKVGYHQIRMHPRGVEKTTFRTHEGHYEFLVMPFGLTNAPSTFQALMNHIFK 301
            A++FSKIDLK GYHQIRMHP  +EKT FRTHEGHYEF+VMPFGLTNAPSTFQALMN +FK
Sbjct: 705  ADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTFQALMNQVFK 764

Query: 302  PYMSRFVSVFFDDVLVHSKGVEEHGQHLEVVLEILRENELYVNLAKCCFAKGIIGYLGHF 361
            P++ RFV VFFDD+L++SKG+EEHGQHLEVVLEILRE+ELY N  KC FAK  I YLGH+
Sbjct: 765  PFLRRFVLVFFDDILIYSKGMEEHGQHLEVVLEILRESELYANFDKCHFAKTRISYLGHY 824

Query: 362  ISEKGTE---------------------------------FVQHYGFIVAPLTQLLRKGG 421
            IS+KG E                                 FVQ+YG I APLTQLL+ G 
Sbjct: 825  ISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLTQLLKSGA 884

Query: 422  FQWTEESKEAFQQLQNAMMTLPVLVLPDFNATFEMETDASRYRVGVVLVQAKRPIAYFSH 481
            ++WTEE++ AF++L+ AMMTLPVL +PDFN  FE+E+DAS + VG VLVQ K+P+AYFS 
Sbjct: 885  YKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKKPVAYFSK 944

Query: 482  TLALRDRAKPIYERELMAVILPVQRWRPYLLERKFIVKTDQKSLKFLLQQRVIQLQYQKW 541
             L+ RDRA+P+YERELMAV+  VQRWRPYLL RKF VKTDQ+SLKFLL+QRVIQ QYQ+W
Sbjct: 945  VLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQW 1004

Query: 542  VAKLTGYSFEVVYKPNLENKAADALSWMPPTVNLGSITAPTLVDILVIKKEVEADEKLSK 601
            +AKL GYSFEV+YKP LENKAADALS + PT +L  +TAP L+D+ VI+KEV  D  L +
Sbjct: 1005 IAKLLGYSFEVLYKPGLENKAADALSRIGPTAHLNQLTAPALLDVEVIQKEVRKDPALRE 1064

Query: 602  IMEELQAMEEGTE-GKFSIRQGMLRYKDKFVLSKTSTLIPTILHTYHDS----------- 661
            I+  ++  E+G E   ++  QG+L++K + VLSK STLIPTI+HTYHDS           
Sbjct: 1065 ILSMIE--EQGIEIPHYTCHQGILKFKGRLVLSKASTLIPTIMHTYHDSVFGGHSGFLRT 1124

Query: 662  -----------------------------NNSLALSPTRLLLSLDSPNNIWSDISMDFIE 699
                                         N S ALSP  LLL L+ P+ IWSDISMDFIE
Sbjct: 1125 YKRMAGELYWKGMKRDVQKYCEECMICQKNKSSALSPAGLLLPLEIPDAIWSDISMDFIE 1184

[Close]

BLAST of CSPI07G08960 vs. ExPASy TrEMBL
Match: A0A5A7U2S1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00940 PE=4 SV=1)

HSP 1 Score: 915.6 bits (2365), Expect = 1.2e-262
Identity = 481/884 (54.41%), Postives = 585/884 (66.18%), Query Frame = 0


Query: 2    AVKGKGICSNVEVTVGEWKITNSFLPLELGGVNVILGMQWLHSLGTIEFDWKNL------ 61
            ++KGKG+C  VE+ +G  K+T+SFLPLELGGV+ ILGMQWLHS+GT E DWKNL      
Sbjct: 525  SIKGKGVCDKVELWLGNCKVTDSFLPLELGGVDAILGMQWLHSIGTTEVDWKNLTLTFFE 584

Query: 62   --------------------------------GRLAE------EGLEDEEVPA----TVD 121
                                            G L E      EG+ED EV      T  
Sbjct: 585  HGNKVTIKGDPSLTKTQISLKGMIKSWDTEDQGYLVECRTLEKEGMEDREVDTQITETEG 644

Query: 122  NMISPLLSKFNDVFDWLEELPPKRNIEHHIPLKKGVDPVNVRPYHYPHQQKEEMERLVDE 181
               + +L+KF DVF+    LPP+R IEHHI LK+G DP+NVRPY Y HQQKEEMERLVDE
Sbjct: 645  GRTTAILNKFRDVFERPNRLPPQRGIEHHIYLKQGADPINVRPYRYAHQQKEEMERLVDE 704

Query: 182  MLKTGIIRPGTSPYSSPVLLVKKKDDSWRFCIDYRELNNVTIPDKFPILVIDELFNELNG 241
            ML +GIIRP TSPYSSPVLLV+KKD SWRFC+DYR LNNVT+PDKFPI V++ELF+ELNG
Sbjct: 705  MLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEELFDELNG 764

Query: 242  ANMFSKIDLKVGYHQIRMHPRGVEKTTFRTHEGHYEFLVMPFGLTNAPSTFQALMNHIFK 301
            A++FSKIDLK GYHQIRMHP  +EKT FRTHEGHYEF+VMPFGLTNAPSTFQALMN +FK
Sbjct: 765  ADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTFQALMNQVFK 824

Query: 302  PYMSRFVSVFFDDVLVHSKGVEEHGQHLEVVLEILRENELYVNLAKCCFAKGIIGYLGHF 361
            P++ RFV VFFDD+L++SKG+EEHGQHLEVVLEILRE+ELY N  KC FAK  I YLGH+
Sbjct: 825  PFLRRFVLVFFDDILIYSKGMEEHGQHLEVVLEILRESELYANFDKCHFAKTRISYLGHY 884

Query: 362  ISEKGTE---------------------------------FVQHYGFIVAPLTQLLRKGG 421
            IS+KG E                                 FVQ+YG I APLTQLL+ G 
Sbjct: 885  ISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLTQLLKSGA 944

Query: 422  FQWTEESKEAFQQLQNAMMTLPVLVLPDFNATFEMETDASRYRVGVVLVQAKRPIAYFSH 481
            ++WTEE++ AF++L+ AMMTLPVL +PDFN  FE+E+DAS + VG VLVQ K+P+AYFS 
Sbjct: 945  YKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKKPVAYFSK 1004

Query: 482  TLALRDRAKPIYERELMAVILPVQRWRPYLLERKFIVKTDQKSLKFLLQQRVIQLQYQKW 541
             L+ RDRA+P+YERELMAV+  VQRWRPYLL RKF VKTDQ+SLKFLL+QRVIQ QYQ+W
Sbjct: 1005 VLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQW 1064

Query: 542  VAKLTGYSFEVVYKPNLENKAADALSWMPPTVNLGSITAPTLVDILVIKKEVEADEKLSK 601
            + KL GYSFEV+YKP LENKAADALS + PT +L  +TAP L+D+ VI+KEV  D  L +
Sbjct: 1065 IVKLLGYSFEVLYKPGLENKAADALSRIGPTAHLNQLTAPALLDVEVIQKEVRKDPALRE 1124

Query: 602  IMEELQAMEEGTE-GKFSIRQGMLRYKDKFVLSKTSTLIPTILHTYHDS----------- 661
            I+  ++  E+G E   ++  QG+L++K + VLSK STLIPTI+HTYHDS           
Sbjct: 1125 ILSMIE--EQGIEIPHYTCHQGILKFKGRLVLSKASTLIPTIMHTYHDSVFGGHSGFLRT 1184

Query: 662  -----------------------------NNSLALSPTRLLLSLDSPNNIWSDISMDFIE 699
                                         N S ALSP  LLL L+ P+ IWSDISMDFIE
Sbjct: 1185 YKRMAGELYWKGMKKDVQKYCEECMICQKNKSSALSPAGLLLPLEIPDAIWSDISMDFIE 1244

[Close]

BLAST of CSPI07G08960 vs. NCBI nr
Match: KAA0025132.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 918.7 bits (2373), Expect = 3.0e-263
Identity = 483/884 (54.64%), Postives = 588/884 (66.52%), Query Frame = 0


Query: 2    AVKGKGICSNVEVTVGEWKITNSFLPLELGGVNVILGMQWLHSLGTIEFDWKNL------ 61
            ++KGKG+C  VE+ +G  K+T+SFLPLELGGV+ ILGMQWLHS+GT E DWKNL      
Sbjct: 785  SIKGKGVCDKVELWLGNCKVTDSFLPLELGGVDAILGMQWLHSIGTTEVDWKNLILTFFE 844

Query: 62   --------------------------------GRLAE------EGLEDEEVPA----TVD 121
                                            G L E      EG+ED EV      T  
Sbjct: 845  HGNKVTIKGDPSLTKTQISLKGMIKSWDTEDQGYLVECRTLEKEGMEDREVDTQITETEG 904

Query: 122  NMISPLLSKFNDVFDWLEELPPKRNIEHHIPLKKGVDPVNVRPYHYPHQQKEEMERLVDE 181
              ++ +L+KF DVF+    LPP+R IEHHI LK+G DPVNVRPY Y HQQKEEMERLVDE
Sbjct: 905  GRMTAILNKFRDVFERPNRLPPQRGIEHHIYLKQGADPVNVRPYRYAHQQKEEMERLVDE 964

Query: 182  MLKTGIIRPGTSPYSSPVLLVKKKDDSWRFCIDYRELNNVTIPDKFPILVIDELFNELNG 241
            ML +GIIRP TSPYSSPVLLV+K+D SWRFC+DYR LNNVT+PDKFPI V++ELF+ELNG
Sbjct: 965  MLSSGIIRPSTSPYSSPVLLVRKRDGSWRFCVDYRALNNVTVPDKFPIPVVEELFDELNG 1024

Query: 242  ANMFSKIDLKVGYHQIRMHPRGVEKTTFRTHEGHYEFLVMPFGLTNAPSTFQALMNHIFK 301
            A++FSKIDLK GYHQIRMHP  +EKT FRTHEGHYEF+VMPFGLTNAPSTFQALMN +FK
Sbjct: 1025 ADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTFQALMNQVFK 1084

Query: 302  PYMSRFVSVFFDDVLVHSKGVEEHGQHLEVVLEILRENELYVNLAKCCFAKGIIGYLGHF 361
            P++ RFV VFFDD+L++SKG+EEHGQHLEVVLEILRE+ELY NL KC FAK  I YLGH+
Sbjct: 1085 PFLRRFVLVFFDDILIYSKGMEEHGQHLEVVLEILRESELYANLDKCHFAKTRISYLGHY 1144

Query: 362  ISEKGTE---------------------------------FVQHYGFIVAPLTQLLRKGG 421
            IS+KG E                                 FVQ+YG I APLTQLL+ G 
Sbjct: 1145 ISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLTQLLKSGA 1204

Query: 422  FQWTEESKEAFQQLQNAMMTLPVLVLPDFNATFEMETDASRYRVGVVLVQAKRPIAYFSH 481
            ++WTEE++ AF++L+ AMMTLPVL +PDFN  FE+E+DAS + VG VLVQ K+P+AYFS 
Sbjct: 1205 YKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKKPVAYFSK 1264

Query: 482  TLALRDRAKPIYERELMAVILPVQRWRPYLLERKFIVKTDQKSLKFLLQQRVIQLQYQKW 541
             L+ RDRA+P+YERELMAV+  VQRWRPYLL RKF VKTDQ+SLKFLL+QRVIQ QYQ+W
Sbjct: 1265 VLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQW 1324

Query: 542  VAKLTGYSFEVVYKPNLENKAADALSWMPPTVNLGSITAPTLVDILVIKKEVEADEKLSK 601
            +AKL GYSFEV+YKP LENKAADALS + PT +L  +TAP L+D+ VI+KEV  D  L +
Sbjct: 1325 IAKLLGYSFEVLYKPGLENKAADALSRIGPTAHLNQLTAPALLDVEVIQKEVRKDPALRE 1384

Query: 602  IMEELQAMEEGTE-GKFSIRQGMLRYKDKFVLSKTSTLIPTILHTYHDS----------- 661
            I+  ++  E+G E   ++  QG+L++K + VLSK STLIPTI+HTYHDS           
Sbjct: 1385 ILSMIE--EQGIEIPHYTCHQGILKFKGRLVLSKASTLIPTIMHTYHDSVFGGHSGFLRT 1444

Query: 662  -----------------------------NNSLALSPTRLLLSLDSPNNIWSDISMDFIE 699
                                         N S ALSP  LLL L+ P+ IWSDISMDFIE
Sbjct: 1445 YKRMAGELYWKGMKKDVQKYCEECMICQKNKSSALSPAGLLLPLEIPDAIWSDISMDFIE 1504

[Close]

BLAST of CSPI07G08960 vs. NCBI nr
Match: TYK23090.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 918.3 bits (2372), Expect = 4.0e-263
Identity = 483/884 (54.64%), Postives = 587/884 (66.40%), Query Frame = 0


Query: 2    AVKGKGICSNVEVTVGEWKITNSFLPLELGGVNVILGMQWLHSLGTIEFDWKNL------ 61
            ++KGKG+C  VE+ +G  K+T+SFLPLELGGV+ ILGMQWLHS+GT E DWKNL      
Sbjct: 465  SIKGKGVCDKVELWLGNCKVTDSFLPLELGGVDAILGMQWLHSIGTTEVDWKNLILTFFE 524

Query: 62   --------------------------------GRLAE------EGLEDEEVPA----TVD 121
                                            G L E      EG+ED EV      T  
Sbjct: 525  HGNKVTIKGDPSLTKTQISLKGMIKSWDTEDQGYLVECRTLEKEGMEDREVDTQITETEG 584

Query: 122  NMISPLLSKFNDVFDWLEELPPKRNIEHHIPLKKGVDPVNVRPYHYPHQQKEEMERLVDE 181
              ++ +L+KF DVF+    LPP+R IEHHI LK+G DPVNVRPY Y HQQKEEMERLVDE
Sbjct: 585  GRMTAILNKFRDVFERPNRLPPQRGIEHHIYLKQGADPVNVRPYRYAHQQKEEMERLVDE 644

Query: 182  MLKTGIIRPGTSPYSSPVLLVKKKDDSWRFCIDYRELNNVTIPDKFPILVIDELFNELNG 241
            ML +GIIRP TSPYSSPVLLV+KKD SWRFC+DYR LNNVT+PDKFPI V++ELF+ELNG
Sbjct: 645  MLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEELFDELNG 704

Query: 242  ANMFSKIDLKVGYHQIRMHPRGVEKTTFRTHEGHYEFLVMPFGLTNAPSTFQALMNHIFK 301
            A++FSKIDLK GYHQIRMHP  +EKT FRTHEGHYEF+VMPFGLTNAPSTFQALMN +FK
Sbjct: 705  ADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTFQALMNQVFK 764

Query: 302  PYMSRFVSVFFDDVLVHSKGVEEHGQHLEVVLEILRENELYVNLAKCCFAKGIIGYLGHF 361
            P++ RFV VFFDD+L++SKG+EEHGQHLEVVLEILRE+ELY N  KC FAK  I YLGH+
Sbjct: 765  PFLRRFVLVFFDDILIYSKGMEEHGQHLEVVLEILRESELYANFDKCHFAKTRISYLGHY 824

Query: 362  ISEKGTE---------------------------------FVQHYGFIVAPLTQLLRKGG 421
            IS+KG E                                 FVQ+YG I APLTQLL+ G 
Sbjct: 825  ISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLTQLLKSGA 884

Query: 422  FQWTEESKEAFQQLQNAMMTLPVLVLPDFNATFEMETDASRYRVGVVLVQAKRPIAYFSH 481
            ++WTEE++ AF++L+ AMMTLPVL +PDFN  FE+E+DAS + VG VLVQ K+P+AYFS 
Sbjct: 885  YKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKKPVAYFSK 944

Query: 482  TLALRDRAKPIYERELMAVILPVQRWRPYLLERKFIVKTDQKSLKFLLQQRVIQLQYQKW 541
             L+ RDRA+P+YERELMAV+  VQRWRPYLL RKF VKTDQ+SLKFLL+QRVIQ QYQ+W
Sbjct: 945  VLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQW 1004

Query: 542  VAKLTGYSFEVVYKPNLENKAADALSWMPPTVNLGSITAPTLVDILVIKKEVEADEKLSK 601
            +AKL GYSFEV+YKP LENKAADALS + PT +L  +TAP L+D+ VI+KEV  D  L +
Sbjct: 1005 IAKLLGYSFEVLYKPGLENKAADALSRIGPTAHLNQLTAPALLDVEVIQKEVRKDPALRE 1064

Query: 602  IMEELQAMEEGTE-GKFSIRQGMLRYKDKFVLSKTSTLIPTILHTYHDS----------- 661
            I+  ++  E+G E   ++  QG+L++K + VLSK STLIPTI+HTYHDS           
Sbjct: 1065 ILSMIE--EQGIEIPHYTCHQGILKFKGRLVLSKASTLIPTIMHTYHDSVFGGHSGFLRT 1124

Query: 662  -----------------------------NNSLALSPTRLLLSLDSPNNIWSDISMDFIE 699
                                         N S ALSP  LLL L+ P+ IWSDISMDFIE
Sbjct: 1125 YKRMAGELYWKGMKKDVQKYCEECMICQKNKSSALSPAGLLLPLEIPDAIWSDISMDFIE 1184

[Close]

BLAST of CSPI07G08960 vs. NCBI nr
Match: TYK15990.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 918.3 bits (2372), Expect = 4.0e-263
Identity = 483/884 (54.64%), Postives = 587/884 (66.40%), Query Frame = 0


Query: 2    AVKGKGICSNVEVTVGEWKITNSFLPLELGGVNVILGMQWLHSLGTIEFDWKNL------ 61
            ++KGKG+C  VE+ +G  K+T+SFLPLELGGV+ ILGMQWLHS+GT E DWKNL      
Sbjct: 525  SIKGKGVCDKVELWLGNCKVTDSFLPLELGGVDAILGMQWLHSIGTTEVDWKNLILTFFE 584

Query: 62   --------------------------------GRLAE------EGLEDEEVPA----TVD 121
                                            G L E      EG+ED EV      T  
Sbjct: 585  HGNKVTIKGDPSLTKTQISLKGMIKSWDTEDQGYLVECRTLEKEGMEDREVDTQITETEG 644

Query: 122  NMISPLLSKFNDVFDWLEELPPKRNIEHHIPLKKGVDPVNVRPYHYPHQQKEEMERLVDE 181
              ++ +L+KF DVF+    LPP+R IEHHI LK+G DPVNVRPY Y HQQKEEMERLVDE
Sbjct: 645  GRMTAILNKFRDVFERPNRLPPQRGIEHHIYLKQGADPVNVRPYRYAHQQKEEMERLVDE 704

Query: 182  MLKTGIIRPGTSPYSSPVLLVKKKDDSWRFCIDYRELNNVTIPDKFPILVIDELFNELNG 241
            ML +GIIRP TSPYSSPVLLV+KKD SWRFC+DYR LNNVT+PDKFPI V++ELF+ELNG
Sbjct: 705  MLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEELFDELNG 764

Query: 242  ANMFSKIDLKVGYHQIRMHPRGVEKTTFRTHEGHYEFLVMPFGLTNAPSTFQALMNHIFK 301
            A++FSKIDLK GYHQIRMHP  +EKT FRTHEGHYEF+VMPFGLTNAPSTFQALMN +FK
Sbjct: 765  ADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTFQALMNQVFK 824

Query: 302  PYMSRFVSVFFDDVLVHSKGVEEHGQHLEVVLEILRENELYVNLAKCCFAKGIIGYLGHF 361
            P++ RFV VFFDD+L++SKG+EEHGQHLEVVLEILRE+ELY N  KC FAK  I YLGH+
Sbjct: 825  PFLRRFVLVFFDDILIYSKGMEEHGQHLEVVLEILRESELYANFDKCHFAKTRISYLGHY 884

Query: 362  ISEKGTE---------------------------------FVQHYGFIVAPLTQLLRKGG 421
            IS+KG E                                 FVQ+YG I APLTQLL+ G 
Sbjct: 885  ISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLTQLLKSGA 944

Query: 422  FQWTEESKEAFQQLQNAMMTLPVLVLPDFNATFEMETDASRYRVGVVLVQAKRPIAYFSH 481
            ++WTEE++ AF++L+ AMMTLPVL +PDFN  FE+E+DAS + VG VLVQ K+P+AYFS 
Sbjct: 945  YKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKKPVAYFSK 1004

Query: 482  TLALRDRAKPIYERELMAVILPVQRWRPYLLERKFIVKTDQKSLKFLLQQRVIQLQYQKW 541
             L+ RDRA+P+YERELMAV+  VQRWRPYLL RKF VKTDQ+SLKFLL+QRVIQ QYQ+W
Sbjct: 1005 VLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQW 1064

Query: 542  VAKLTGYSFEVVYKPNLENKAADALSWMPPTVNLGSITAPTLVDILVIKKEVEADEKLSK 601
            +AKL GYSFEV+YKP LENKAADALS + PT +L  +TAP L+D+ VI+KEV  D  L +
Sbjct: 1065 IAKLLGYSFEVLYKPGLENKAADALSRIGPTAHLNQLTAPALLDVEVIQKEVRKDPALRE 1124

Query: 602  IMEELQAMEEGTE-GKFSIRQGMLRYKDKFVLSKTSTLIPTILHTYHDS----------- 661
            I+  ++  E+G E   ++  QG+L++K + VLSK STLIPTI+HTYHDS           
Sbjct: 1125 ILSMIE--EQGIEIPHYTCHQGILKFKGRLVLSKASTLIPTIMHTYHDSVFGGHSGFLRT 1184

Query: 662  -----------------------------NNSLALSPTRLLLSLDSPNNIWSDISMDFIE 699
                                         N S ALSP  LLL L+ P+ IWSDISMDFIE
Sbjct: 1185 YKRMAGELYWKGMKKDVQKYCEECMICQKNKSSALSPAGLLLPLEIPDAIWSDISMDFIE 1244

[Close]

BLAST of CSPI07G08960 vs. NCBI nr
Match: KAA0049776.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 918.3 bits (2372), Expect = 4.0e-263
Identity = 483/884 (54.64%), Postives = 587/884 (66.40%), Query Frame = 0


Query: 2    AVKGKGICSNVEVTVGEWKITNSFLPLELGGVNVILGMQWLHSLGTIEFDWKNL------ 61
            ++KGKG+C  VE+ +G  K+T+SFLPLELGGV+ ILGMQWLHS+GT E DWKNL      
Sbjct: 465  SIKGKGVCDKVELWLGNCKVTDSFLPLELGGVDAILGMQWLHSIGTTEVDWKNLILTFFE 524

Query: 62   --------------------------------GRLAE------EGLEDEEVPA----TVD 121
                                            G L E      EG+ED EV      T  
Sbjct: 525  HGNKVTIKGDPSLTKTQISLKGMIKSWDTEDQGYLVECRTLEKEGMEDREVDTQITETEG 584

Query: 122  NMISPLLSKFNDVFDWLEELPPKRNIEHHIPLKKGVDPVNVRPYHYPHQQKEEMERLVDE 181
              ++ +L+KF DVF+    LPP+R IEHHI LK+G DPVNVRPY Y HQQKEEMERLVDE
Sbjct: 585  GRMTAILNKFRDVFERPNRLPPQRGIEHHIYLKQGADPVNVRPYRYAHQQKEEMERLVDE 644

Query: 182  MLKTGIIRPGTSPYSSPVLLVKKKDDSWRFCIDYRELNNVTIPDKFPILVIDELFNELNG 241
            ML +GIIRP TSPYSSPVLLV+KKD SWRFC+DYR LNNVT+PDKFPI V++ELF+ELNG
Sbjct: 645  MLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEELFDELNG 704

Query: 242  ANMFSKIDLKVGYHQIRMHPRGVEKTTFRTHEGHYEFLVMPFGLTNAPSTFQALMNHIFK 301
            A++FSKIDLK GYHQIRMHP  +EKT FRTHEGHYEF+VMPFGLTNAPSTFQALMN +FK
Sbjct: 705  ADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTFQALMNQVFK 764

Query: 302  PYMSRFVSVFFDDVLVHSKGVEEHGQHLEVVLEILRENELYVNLAKCCFAKGIIGYLGHF 361
            P++ RFV VFFDD+L++SKG+EEHGQHLEVVLEILRE+ELY N  KC FAK  I YLGH+
Sbjct: 765  PFLRRFVLVFFDDILIYSKGMEEHGQHLEVVLEILRESELYANFDKCHFAKTRISYLGHY 824

Query: 362  ISEKGTE---------------------------------FVQHYGFIVAPLTQLLRKGG 421
            IS+KG E                                 FVQ+YG I APLTQLL+ G 
Sbjct: 825  ISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLTQLLKSGA 884

Query: 422  FQWTEESKEAFQQLQNAMMTLPVLVLPDFNATFEMETDASRYRVGVVLVQAKRPIAYFSH 481
            ++WTEE++ AF++L+ AMMTLPVL +PDFN  FE+E+DAS + VG VLVQ K+P+AYFS 
Sbjct: 885  YKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKKPVAYFSK 944

Query: 482  TLALRDRAKPIYERELMAVILPVQRWRPYLLERKFIVKTDQKSLKFLLQQRVIQLQYQKW 541
             L+ RDRA+P+YERELMAV+  VQRWRPYLL RKF VKTDQ+SLKFLL+QRVIQ QYQ+W
Sbjct: 945  VLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQW 1004

Query: 542  VAKLTGYSFEVVYKPNLENKAADALSWMPPTVNLGSITAPTLVDILVIKKEVEADEKLSK 601
            +AKL GYSFEV+YKP LENKAADALS + PT +L  +TAP L+D+ VI+KEV  D  L +
Sbjct: 1005 IAKLLGYSFEVLYKPGLENKAADALSRIGPTAHLNQLTAPALLDVEVIQKEVRKDPALRE 1064

Query: 602  IMEELQAMEEGTE-GKFSIRQGMLRYKDKFVLSKTSTLIPTILHTYHDS----------- 661
            I+  ++  E+G E   ++  QG+L++K + VLSK STLIPTI+HTYHDS           
Sbjct: 1065 ILSMIE--EQGIEIPHYTCHQGILKFKGRLVLSKASTLIPTIMHTYHDSVFGGHSGFLRT 1124

Query: 662  -----------------------------NNSLALSPTRLLLSLDSPNNIWSDISMDFIE 699
                                         N S ALSP  LLL L+ P+ IWSDISMDFIE
Sbjct: 1125 YKRMAGELYWKGMKRDVQKYCEECMICQKNKSSALSPAGLLLPLEIPDAIWSDISMDFIE 1184

[Close]

BLAST of CSPI07G08960 vs. NCBI nr
Match: KAA0049630.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 915.6 bits (2365), Expect = 2.6e-262
Identity = 481/884 (54.41%), Postives = 585/884 (66.18%), Query Frame = 0


Query: 2    AVKGKGICSNVEVTVGEWKITNSFLPLELGGVNVILGMQWLHSLGTIEFDWKNL------ 61
            ++KGKG+C  VE+ +G  K+T+SFLPLELGGV+ ILGMQWLHS+GT E DWKNL      
Sbjct: 525  SIKGKGVCDKVELWLGNCKVTDSFLPLELGGVDAILGMQWLHSIGTTEVDWKNLTLTFFE 584

Query: 62   --------------------------------GRLAE------EGLEDEEVPA----TVD 121
                                            G L E      EG+ED EV      T  
Sbjct: 585  HGNKVTIKGDPSLTKTQISLKGMIKSWDTEDQGYLVECRTLEKEGMEDREVDTQITETEG 644

Query: 122  NMISPLLSKFNDVFDWLEELPPKRNIEHHIPLKKGVDPVNVRPYHYPHQQKEEMERLVDE 181
               + +L+KF DVF+    LPP+R IEHHI LK+G DP+NVRPY Y HQQKEEMERLVDE
Sbjct: 645  GRTTAILNKFRDVFERPNRLPPQRGIEHHIYLKQGADPINVRPYRYAHQQKEEMERLVDE 704

Query: 182  MLKTGIIRPGTSPYSSPVLLVKKKDDSWRFCIDYRELNNVTIPDKFPILVIDELFNELNG 241
            ML +GIIRP TSPYSSPVLLV+KKD SWRFC+DYR LNNVT+PDKFPI V++ELF+ELNG
Sbjct: 705  MLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEELFDELNG 764

Query: 242  ANMFSKIDLKVGYHQIRMHPRGVEKTTFRTHEGHYEFLVMPFGLTNAPSTFQALMNHIFK 301
            A++FSKIDLK GYHQIRMHP  +EKT FRTHEGHYEF+VMPFGLTNAPSTFQALMN +FK
Sbjct: 765  ADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTFQALMNQVFK 824

Query: 302  PYMSRFVSVFFDDVLVHSKGVEEHGQHLEVVLEILRENELYVNLAKCCFAKGIIGYLGHF 361
            P++ RFV VFFDD+L++SKG+EEHGQHLEVVLEILRE+ELY N  KC FAK  I YLGH+
Sbjct: 825  PFLRRFVLVFFDDILIYSKGMEEHGQHLEVVLEILRESELYANFDKCHFAKTRISYLGHY 884

Query: 362  ISEKGTE---------------------------------FVQHYGFIVAPLTQLLRKGG 421
            IS+KG E                                 FVQ+YG I APLTQLL+ G 
Sbjct: 885  ISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLTQLLKSGA 944

Query: 422  FQWTEESKEAFQQLQNAMMTLPVLVLPDFNATFEMETDASRYRVGVVLVQAKRPIAYFSH 481
            ++WTEE++ AF++L+ AMMTLPVL +PDFN  FE+E+DAS + VG VLVQ K+P+AYFS 
Sbjct: 945  YKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKKPVAYFSK 1004

Query: 482  TLALRDRAKPIYERELMAVILPVQRWRPYLLERKFIVKTDQKSLKFLLQQRVIQLQYQKW 541
             L+ RDRA+P+YERELMAV+  VQRWRPYLL RKF VKTDQ+SLKFLL+QRVIQ QYQ+W
Sbjct: 1005 VLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQW 1064

Query: 542  VAKLTGYSFEVVYKPNLENKAADALSWMPPTVNLGSITAPTLVDILVIKKEVEADEKLSK 601
            + KL GYSFEV+YKP LENKAADALS + PT +L  +TAP L+D+ VI+KEV  D  L +
Sbjct: 1065 IVKLLGYSFEVLYKPGLENKAADALSRIGPTAHLNQLTAPALLDVEVIQKEVRKDPALRE 1124

Query: 602  IMEELQAMEEGTE-GKFSIRQGMLRYKDKFVLSKTSTLIPTILHTYHDS----------- 661
            I+  ++  E+G E   ++  QG+L++K + VLSK STLIPTI+HTYHDS           
Sbjct: 1125 ILSMIE--EQGIEIPHYTCHQGILKFKGRLVLSKASTLIPTIMHTYHDSVFGGHSGFLRT 1184

Query: 662  -----------------------------NNSLALSPTRLLLSLDSPNNIWSDISMDFIE 699
                                         N S ALSP  LLL L+ P+ IWSDISMDFIE
Sbjct: 1185 YKRMAGELYWKGMKKDVQKYCEECMICQKNKSSALSPAGLLLPLEIPDAIWSDISMDFIE 1244

[Close]

BLAST of CSPI07G08960 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 8.6e-14
Identity = 46/129 (35.66%), Postives = 62/129 (48.06%), Query Frame = 0


Query: 280 HLEVVLEILRENELYVNLAKCCFAKGIIGYLG--HFISEKGT------------------ 339
           HL +VL+I  +++ Y N  KC F +  I YLG  H IS +G                   
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 340 ---------------EFVQHYGFIVAPLTQLLRKGGFQWTEESKEAFQQLQNAMMTLPVL 374
                           FV++YG IV PLT+LL+K   +WTE +  AF+ L+ A+ TLPVL
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLPVL 122

[Close]

BLAST of CSPI07G08960 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 5.6e-05
Identity = 20/39 (51.28%), Postives = 28/39 (71.79%), Query Frame = 0


Query: 123 QKEEMERLVDEMLKTGIIRPGTSPYSSPVLLVKKKDDSW 162
           ++  ++  + EML+  II+P  SPYSSPVLLV+KKD  W
Sbjct: 41  RRTRLKNWLGEMLEARIIQPSISPYSSPVLLVQKKDGGW 79

The following BLAST results are available for this feature:

BLAST of CSPI07G08960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	8.5e-75	29.20	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	1.5e-74	29.20	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P04323	2.0e-68	34.07	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	5.9e-68	34.08	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q8I7P9	5.5e-66	31.83	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]

BLAST of CSPI07G08960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SIV7	1.5e-263	54.64	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3CXB1	1.9e-263	54.64	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DI73	1.9e-263	54.64	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7U6J3	1.9e-263	54.64	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7U2S1	1.2e-262	54.41	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of CSPI07G08960 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025132.1	3.0e-263	54.64	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK23090.1	4.0e-263	54.64	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK15990.1	4.0e-263	54.64	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0049776.1	4.0e-263	54.64	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0049630.1	2.6e-262	54.41	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of CSPI07G08960 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	8.6e-14	35.66	DNA/RNA polymerases superfamily protein	[more]
ATMG00850.1	5.6e-05	51.28	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 179..314 e-value: 1.0E-86 score: 291.7
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 154..312 e-value: 2.0E-27 score: 96.1
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 135..314 score: 15.127812
None	No IPR available	GENE3D	3.10.20.370		coord: 368..439 e-value: 8.3E-6 score: 27.7
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 99..239 e-value: 1.0E-86 score: 291.7
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 7..54 coord: 75..265
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 319..558
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 7..54 coord: 319..558 coord: 75..265
None	No IPR available	CDD	cd01647	RT_LTR	coord: 138..314 e-value: 1.23391E-87 score: 270.235
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 374..486 e-value: 1.87717E-37 score: 133.772
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 3..43 e-value: 9.09391E-6 score: 42.7088
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 343..437 e-value: 6.0E-27 score: 93.6
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 579..686 e-value: 6.8E-16 score: 60.1
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 555..698 score: 9.531604
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 79..474
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 587..668

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G08960.1	CSPI07G08960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding