CSPI07G08810 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G08810
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	Chr7: 6637949 .. 6639009 (+)
RNA-Seq Expression	CSPI07G08810
Synteny	CSPI07G08810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGCAAGGCTACAGAAAAACTACTTCTGATTACTGTGTTTTTGTCCAGAAATTTTCTGATGATGATTTTGTTATATTATTATTATATGTTGATGATATTTTGATTGTTGGCAGGAATGTTTTGAGAATTGATAACTTGAAGAAACAATTGAGCAAATCCTTTGCCATGAAGGATTTGGGGCCAGCAAAGAAAGGTCTTGGAATTCGAATAGTTCGAGATAAAGCATCCGAGAAGTTATACATGTCACAGGAGCAACACATAGAGAAAGTACTTGAACGTTTCAAGATGAGTCAAGAAAAATCAGTTAGTTCCCTTTTACCCAGTCACTTCAAATTGATCAGTAAACAGAGCCCTTCTATAGATAAAGAGAAGGAGGATATAAGTACGGTCATGATGCTTCAGTAGTTGGAAGTCTAATGTATGTCATGGTATGTACTAGACATGATATTGCTCATGATGTTGGTGTTGTTAGTCGTTTTATGTCTAATCCAAGAAAACATTGGGAGGCAGTCAAGTGCATCATGAGATATTTGAGAGGTACTTCCAGTTTGAAGCTCACATTTGGGGATGGAAAGTCAGTACTTGCTGGGTATACTGATTCAGATATGGCAAGGGACTTAGACAGCAGAAAGTCTACTTCTGGTTACTTGATGACATTTGCAGGTGGTGCAGTGTCTTGGCAGTCAAGGTTGCAGAAATGTGTTGCCCTTTCTACAACTGAAGTAGAGTATATTACAGCAGTAGAAGCATGTAAAGAGATGTTGTGGATGAAGCGCTTTGTACAAGAGCTTGGCTTCAAGCAACAACGATATGTGATATATTGTGAGAATCAGAGTGCTATTCACCTTGGTAAGAATGCTTCATTTCATTCCAGAACAACATATATTGATGTGAGATATCACTTGCTTAGAGATGCTTTAAATGATGAATTGTTTGAACTTGAGAAGATACACACTGATCATAATGGATCTAAAATGTTGACAAAGAATCAACCAAGATCGAAGCTTGAGTTTTGTCATTCCACACTAGGAATAACAAATTCATCCTCAAAGTGA

mRNA sequence

ATGGAGGAGCAAGGCTACAGAAAAACTACTTCTGATTACTGTGTTTTTGTCCAGAAATTTTCTGATGATGATTTTGTTATATTATTATTATATGTTGATGATATTTTGATTGTTGGCAGGAATGTTTTGAGAATTGATAACTTGAAGAAACAATTGAGCAAATCCTTTGCCATGAAGGATTTGGGGCCAGCAAAGAAAGGTCTTGGAATTCGAATAGTTCGAGATAAAGCATCCGAGAAGTTATACATGTCACAGGAGCAACACATAGAGAAAGTACTTGAACGTTTCAAGATGAGTCAAGAAAAATCAGTTAGTTCCCTTTTACCCATAGTTGGAAGTCTAATGTATGTCATGGTATGTACTAGACATGATATTGCTCATGATGTTGGTGTTGTTAGTCGTTTTATGTCTAATCCAAGAAAACATTGGGAGGCAGTCAAGTGCATCATGAGATATTTGAGAGGTACTTCCAGTTTGAAGCTCACATTTGGGGATGGAAAGTCAGTACTTGCTGGGTATACTGATTCAGATATGGCAAGGGACTTAGACAGCAGAAAGTCTACTTCTGGTTACTTGATGACATTTGCAGGTGGTGCAGTGTCTTGGCAGTCAAGGTTGCAGAAATGTGTTGCCCTTTCTACAACTGAAGTAGAGTATATTACAGCAGTAGAAGCATGTAAAGAGATGTTGTGGATGAAGCGCTTTGTACAAGAGCTTGGCTTCAAGCAACAACGATATGTGATATATTGTGAGAATCAGAGTGCTATTCACCTTGGTAAGAATGCTTCATTTCATTCCAGAACAACATATATTGATGTGAGATATCACTTGCTTAGAGATGCTTTAAATGATGAATTGTTTGAACTTGAGAAGATACACACTGATCATAATGGATCTAAAATGTTGACAAAGAATCAACCAAGATCGAAGCTTGAGTTTTGTCATTCCACACTAGGAATAACAAATTCATCCTCAAAGTGA

Coding sequence (CDS)

ATGGAGGAGCAAGGCTACAGAAAAACTACTTCTGATTACTGTGTTTTTGTCCAGAAATTTTCTGATGATGATTTTGTTATATTATTATTATATGTTGATGATATTTTGATTGTTGGCAGGAATGTTTTGAGAATTGATAACTTGAAGAAACAATTGAGCAAATCCTTTGCCATGAAGGATTTGGGGCCAGCAAAGAAAGGTCTTGGAATTCGAATAGTTCGAGATAAAGCATCCGAGAAGTTATACATGTCACAGGAGCAACACATAGAGAAAGTACTTGAACGTTTCAAGATGAGTCAAGAAAAATCAGTTAGTTCCCTTTTACCCATAGTTGGAAGTCTAATGTATGTCATGGTATGTACTAGACATGATATTGCTCATGATGTTGGTGTTGTTAGTCGTTTTATGTCTAATCCAAGAAAACATTGGGAGGCAGTCAAGTGCATCATGAGATATTTGAGAGGTACTTCCAGTTTGAAGCTCACATTTGGGGATGGAAAGTCAGTACTTGCTGGGTATACTGATTCAGATATGGCAAGGGACTTAGACAGCAGAAAGTCTACTTCTGGTTACTTGATGACATTTGCAGGTGGTGCAGTGTCTTGGCAGTCAAGGTTGCAGAAATGTGTTGCCCTTTCTACAACTGAAGTAGAGTATATTACAGCAGTAGAAGCATGTAAAGAGATGTTGTGGATGAAGCGCTTTGTACAAGAGCTTGGCTTCAAGCAACAACGATATGTGATATATTGTGAGAATCAGAGTGCTATTCACCTTGGTAAGAATGCTTCATTTCATTCCAGAACAACATATATTGATGTGAGATATCACTTGCTTAGAGATGCTTTAAATGATGAATTGTTTGAACTTGAGAAGATACACACTGATCATAATGGATCTAAAATGTTGACAAAGAATCAACCAAGATCGAAGCTTGAGTTTTGTCATTCCACACTAGGAATAACAAATTCATCCTCAAAGTGA

Protein sequence

MEEQGYRKTTSDYCVFVQKFSDDDFVILLLYVDDILIVGRNVLRIDNLKKQLSKSFAMKDLGPAKKGLGIRIVRDKASEKLYMSQEQHIEKVLERFKMSQEKSVSSLLPIVGSLMYVMVCTRHDIAHDVGVVSRFMSNPRKHWEAVKCIMRYLRGTSSLKLTFGDGKSVLAGYTDSDMARDLDSRKSTSGYLMTFAGGAVSWQSRLQKCVALSTTEVEYITAVEACKEMLWMKRFVQELGFKQQRYVIYCENQSAIHLGKNASFHSRTTYIDVRYHLLRDALNDELFELEKIHTDHNGSKMLTKNQPRSKLEFCHSTLGITNSSSK*

Homology

[Close]

BLAST of CSPI07G08810 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.9e-101
Identity = 192/348 (55.17%), Postives = 251/348 (72.13%), Query Frame = 0


Query: 1    MEEQGYRKTTSDYCVFVQKFSDDDFVILLLYVDDILIVGRNVLRIDNLKKQLSKSFAMKD 60
            M+ Q Y KT SD CV+ ++FS+++F+ILLLYVDD+LIVG++   I  LK  LSKSF MKD
Sbjct: 978  MKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKD 1037

Query: 61   LGPAKKGLGIRIVRDKASEKLYMSQEQHIEKVLERFKMSQEKSVSSLL------------ 120
            LGPA++ LG++IVR++ S KL++SQE++IE+VLERF M   K VS+ L            
Sbjct: 1038 LGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCP 1097

Query: 121  ---------------PIVGSLMYVMVCTRHDIAHDVGVVSRFMSNP-RKHWEAVKCIMRY 180
                             VGSLMY MVCTR DIAH VGVVSRF+ NP ++HWEAVK I+RY
Sbjct: 1098 TTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRY 1157

Query: 181  LRGTSSLKLTFGDGKSVLAGYTDSDMARDLDSRKSTSGYLMTFAGGAVSWQSRLQKCVAL 240
            LRGT+   L FG    +L GYTD+DMA D+D+RKS++GYL TF+GGA+SWQS+LQKCVAL
Sbjct: 1158 LRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVAL 1217

Query: 241  STTEVEYITAVEACKEMLWMKRFVQELGFKQQRYVIYCENQSAIHLGKNASFHSRTTYID 300
            STTE EYI A E  KEM+W+KRF+QELG  Q+ YV+YC++QSAI L KN+ +H+RT +ID
Sbjct: 1218 STTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHID 1277

Query: 301  VRYHLLRDALNDELFELEKIHTDHNGSKMLTKNQPRSKLEFCHSTLGI 321
            VRYH +R+ ++DE  ++ KI T+ N + MLTK  PR+K E C   +G+
Sbjct: 1278 VRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELVGM 1325

[Close]

BLAST of CSPI07G08810 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 190.7 bits (483), Expect = 2.7e-47
Identity = 113/347 (32.56%), Postives = 192/347 (55.33%), Query Frame = 0


Query: 1    MEEQGYRKTTSDYCVFV-QKFSDDDFVILLLYVDDILIVGRNVLRIDNLKKQLSKSFAMK 60
            ++E  +  ++ D C+++  K + ++ + +LLYVDD++I   ++ R++N K+ L + F M 
Sbjct: 1056 LKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMT 1115

Query: 61   DLGPAKKGLGIRIVRDKASEKLYMSQEQHIEKVLERFKMSQEKSVSSLLP---------- 120
            DL   K  +GIRI  +   +K+Y+SQ  +++K+L +F M    +VS+ LP          
Sbjct: 1116 DLNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNS 1175

Query: 121  ----------IVGSLMYVMVCTRHDIAHDVGVVSRFMS-NPRKHWEAVKCIMRYLRGTSS 180
                      ++G LMY+M+CTR D+   V ++SR+ S N  + W+ +K ++RYL+GT  
Sbjct: 1176 DEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTID 1235

Query: 181  LKLTFGDG---KSVLAGYTDSDMARDLDSRKSTSGYLM-TFAGGAVSWQSRLQKCVALST 240
            +KL F      ++ + GY DSD A     RKST+GYL   F    + W ++ Q  VA S+
Sbjct: 1236 MKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASS 1295

Query: 241  TEVEYITAVEACKEMLWMKRFVQELGFKQQRYV-IYCENQSAIHLGKNASFHSRTTYIDV 300
            TE EY+   EA +E LW+K  +  +  K +  + IY +NQ  I +  N S H R  +ID+
Sbjct: 1296 TEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDI 1355

Query: 301  RYHLLRDALNDELFELEKIHTDHNGSKMLTKNQPRSKLEFCHSTLGI 321
            +YH  R+ + + +  LE I T++  + + TK  P ++       LG+
Sbjct: 1356 KYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGL 1400

[Close]

BLAST of CSPI07G08810 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.8e-35
Identity = 112/341 (32.84%), Postives = 170/341 (49.85%), Query Frame = 0


Query: 5    GYRKTTSDYCVFVQKFSDDDFVILLLYVDDILIVGRNVLRIDNLKKQLSKSFAMKDLGPA 64
            G+  + SD  +FV +      V +L+YVDDILI G +   + N    LS+ F++KD    
Sbjct: 1125 GFVNSVSDTSLFVLQ-RGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEEL 1184

Query: 65   KKGLGIRIVRDKASEKLYMSQEQHIEKVLERFKMSQEKSVSSLLP--------------- 124
               LGI   R      L++SQ ++I  +L R  M   K V++ +                
Sbjct: 1185 HYFLGIEAKR--VPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTD 1244

Query: 125  ------IVGSLMYVMVCTRHDIAHDVGVVSRFMSNP-RKHWEAVKCIMRYLRGTSSLKLT 184
                  IVGSL Y +  TR DI++ V  +S+FM  P  +H +A+K I+RYL GT +  + 
Sbjct: 1245 PTEYRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIF 1304

Query: 185  FGDGKSV-LAGYTDSDMARDLDSRKSTSGYLMTFAGGAVSWQSRLQKCVALSTTEVEYIT 244
               G ++ L  Y+D+D A D D   ST+GY++      +SW S+ QK V  S+TE EY +
Sbjct: 1305 LKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRS 1364

Query: 245  AVEACKEMLWMKRFVQELGFKQQR-YVIYCENQSAIHLGKNASFHSRTTYIDVRYHLLRD 304
                  EM W+   + ELG +  R  VIYC+N  A +L  N  FHSR  +I + YH +R+
Sbjct: 1365 VANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRN 1424

Query: 305  ALNDELFELEKIHTDHNGSKMLTKNQPRSKLEFCHSTLGIT 322
             +      +  + T    +  LTK   R+  +   S +G+T
Sbjct: 1425 QVQSGALRVVHVSTHDQLADTLTKPLSRTAFQNFASKIGVT 1461

[Close]

BLAST of CSPI07G08810 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.2e-32
Identity = 105/333 (31.53%), Postives = 166/333 (49.85%), Query Frame = 0


Query: 5    GYRKTTSDYCVFVQKFSDDDFVILLLYVDDILIVGRNVLRIDNLKKQLSKSFAMKDLGPA 64
            G+  + SD  +FV +      + +L+YVDDILI G + + + +    LS+ F++K+    
Sbjct: 1108 GFVNSISDTSLFVLQ-RGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDL 1167

Query: 65   KKGLGIRIVRDKASEKLYMSQEQHIEKVLERFKMSQEKSVS--------------SLLP- 124
               LGI   R    + L++SQ ++   +L R  M   K V+              + LP 
Sbjct: 1168 HYFLGIEAKR--VPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPD 1227

Query: 125  ------IVGSLMYVMVCTRHDIAHDVGVVSRFMSNPR-KHWEAVKCIMRYLRGTSSLKLT 184
                  IVGSL Y +  TR D+++ V  +S++M  P   HW A+K ++RYL GT    + 
Sbjct: 1228 PTEYRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIF 1287

Query: 185  FGDGKSV-LAGYTDSDMARDLDSRKSTSGYLMTFAGGAVSWQSRLQKCVALSTTEVEYIT 244
               G ++ L  Y+D+D A D D   ST+GY++      +SW S+ QK V  S+TE EY +
Sbjct: 1288 LKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRS 1347

Query: 245  AVEACKEMLWMKRFVQELGFK-QQRYVIYCENQSAIHLGKNASFHSRTTYIDVRYHLLRD 304
                  E+ W+   + ELG +     VIYC+N  A +L  N  FHSR  +I + YH +R+
Sbjct: 1348 VANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRN 1407

Query: 305  ALNDELFELEKIHTDHNGSKMLTKNQPRSKLEF 314
             +      +  + T    +  LTK  P S++ F
Sbjct: 1408 QVQSGALRVVHVSTHDQLADTLTK--PLSRVAF 1434

[Close]

BLAST of CSPI07G08810 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.0e-26
Identity = 63/127 (49.61%), Postives = 90/127 (70.87%), Query Frame = 0


Query: 108 LPIVGSLMYVMVCTRHDIAHDVGVVSRFMSNP-RKHWEAVKCIMRYLRGTSSLKLTF-GD 167
           L  VG++MY+MV TR D+A  VGV+S+F S+P   HW+A+K ++RYL+ T +  L F   
Sbjct: 7   LSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYGLEFTRA 66

Query: 168 GKSVLAGYTDSDMARDLDSRKSTSGYLMTFAGGAVSWQSRLQKCVALSTTEVEYITAVEA 227
           G + L GY+D+D A D++SR+STSGYL    GG VSW+S+ Q+ VALS+TE EY+   EA
Sbjct: 67  GTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEYMALSEA 126

Query: 228 CKEMLWM 233
            +E +W+
Sbjct: 127 TQEAVWL 133

[Close]

BLAST of CSPI07G08810 vs. ExPASy TrEMBL
Match: A0A438HN89 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3233 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.3e-132
Identity = 252/354 (71.19%), Postives = 283/354 (79.94%), Query Frame = 0


Query: 1    MEEQGYRKTTSDYCVFVQKFSDDDFVILLLYVDDILIVGRNVLRIDNLKKQLSKSFAMKD 60
            M EQGYRKTTSD+CVFVQKFSDDDFVILLLYVDDILIVGRNV RIDNLKKQLSKSFAMKD
Sbjct: 974  MGEQGYRKTTSDHCVFVQKFSDDDFVILLLYVDDILIVGRNVSRIDNLKKQLSKSFAMKD 1033

Query: 61   LGPAKKGLGIRIVRDKASEKLYMSQEQHIEKVLERFKMSQEKSVSSLL------------ 120
            LGP K+ LGIRI RD+AS+KL M QEQ+IEKVL RF MS+ K VSS L            
Sbjct: 1034 LGPVKRILGIRIERDRASKKLCMLQEQYIEKVLARFNMSKAKVVSSPLASHFKLSSRHSP 1093

Query: 121  ---------------PIVGSLMYVMVCTRHDIAHDVGVVSRFMSNP-RKHWEAVKCIMRY 180
                             VGSLMYVMVCTR DIA+ VGVVSRF+SNP R HWEAVK IMRY
Sbjct: 1094 STDKEKEDMRRVPYASAVGSLMYVMVCTRPDIAYSVGVVSRFLSNPGRHHWEAVKWIMRY 1153

Query: 181  LRGTSSLKLTFGDGKSVLAGYTDSDMARDLDSRKSTSGYLMTFAGGAVSWQSRLQKCVAL 240
            LRGTS LKLTFG GK +L GYTDSDMA D+D+R+STSGYL TF+GGAVSWQSRLQKCV L
Sbjct: 1154 LRGTSKLKLTFGSGKPILVGYTDSDMAGDVDNRRSTSGYLTTFSGGAVSWQSRLQKCVVL 1213

Query: 241  STTEVEYITAVEACKEMLWMKRFVQELGFKQQRYVIYCENQSAIHLGKNASFHSRTTYID 300
            STTE EYI A EACKE+LWMK F+QELGFKQQRYV+YC+NQSAIHL KN+++H+R+ +ID
Sbjct: 1214 STTEAEYIAAAEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHID 1273

Query: 301  VRYHLLRDALNDELFELEKIHTDHNGSKMLTKNQPRSKLEFCHSTLGITNSSSK 327
            VRYH +RDALND LFE+EKIHTD+NGS MLTK  PR KL  C S +G+ +S+ +
Sbjct: 1274 VRYHWMRDALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSIVGMISSNGR 1327

[Close]

BLAST of CSPI07G08810 vs. ExPASy TrEMBL
Match: A0A438CLF9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2520 PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 2.2e-132
Identity = 252/354 (71.19%), Postives = 282/354 (79.66%), Query Frame = 0


Query: 1   MEEQGYRKTTSDYCVFVQKFSDDDFVILLLYVDDILIVGRNVLRIDNLKKQLSKSFAMKD 60
           M EQGYRKTTSD+CVFVQKFSDDDFVILLLYVDDILIVGRNV RIDNLKKQLSKSFAMKD
Sbjct: 225 MGEQGYRKTTSDHCVFVQKFSDDDFVILLLYVDDILIVGRNVSRIDNLKKQLSKSFAMKD 284

Query: 61  LGPAKKGLGIRIVRDKASEKLYMSQEQHIEKVLERFKMSQEKSVSSLL------------ 120
           LGP K+ LGIRI RD+AS+KL M QEQ+IEKVL RF M + K VSS L            
Sbjct: 285 LGPVKRILGIRIERDRASKKLCMLQEQYIEKVLARFNMGKAKVVSSPLASHFKLSSRHSP 344

Query: 121 ---------------PIVGSLMYVMVCTRHDIAHDVGVVSRFMSNP-RKHWEAVKCIMRY 180
                            VGSLMY MVCTR DIA+ VGVVSRF+SNP R HWEAVK IMRY
Sbjct: 345 STDKEKEDMRRVPYASAVGSLMYAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRY 404

Query: 181 LRGTSSLKLTFGDGKSVLAGYTDSDMARDLDSRKSTSGYLMTFAGGAVSWQSRLQKCVAL 240
           LRGTS LKLTFG GK +L GYTDSDMA D+D+R+STSGYLMTF+GGAVSWQSRLQKCVAL
Sbjct: 405 LRGTSKLKLTFGSGKPILVGYTDSDMAGDVDNRRSTSGYLMTFSGGAVSWQSRLQKCVAL 464

Query: 241 STTEVEYITAVEACKEMLWMKRFVQELGFKQQRYVIYCENQSAIHLGKNASFHSRTTYID 300
           STTE EYI A EACKE+LWMK F+QELGFKQQRYV+YC+NQSAIHL KN+++H+R+ +ID
Sbjct: 465 STTEAEYIAAAEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHID 524

Query: 301 VRYHLLRDALNDELFELEKIHTDHNGSKMLTKNQPRSKLEFCHSTLGITNSSSK 327
           VRYH +RDALND LFE+EKIHTD+NGS MLTK  PR KL  C S  G+ +S+ +
Sbjct: 525 VRYHWMRDALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSIAGMISSNGR 578

[Close]

BLAST of CSPI07G08810 vs. ExPASy TrEMBL
Match: A0A438CN91 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3654 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.8e-132
Identity = 252/354 (71.19%), Postives = 284/354 (80.23%), Query Frame = 0


Query: 1    MEEQGYRKTTSDYCVFVQKFSDDDFVILLLYVDDILIVGRNVLRIDNLKKQLSKSFAMKD 60
            M EQGYRKTTSD+CVFVQKFSDDDFVILLLYVDDILIVGRNV RID+LKKQLSKSFAMKD
Sbjct: 865  MGEQGYRKTTSDHCVFVQKFSDDDFVILLLYVDDILIVGRNVSRIDSLKKQLSKSFAMKD 924

Query: 61   LGPAKKGLGIRIVRDKASEKLYMSQEQHIEKVLERFKMSQEKSVSSLL------------ 120
            LGP K+ LGIRI +D+AS+KL M QEQ+IEKVL RF MS+ K VSS L            
Sbjct: 925  LGPVKRILGIRIEQDRASKKLCMLQEQYIEKVLARFNMSKAKVVSSPLASHFKLSSRHSP 984

Query: 121  ---------------PIVGSLMYVMVCTRHDIAHDVGVVSRFMSNP-RKHWEAVKCIMRY 180
                             VGSLMY MVCTR DIA+ VGVVSRF+SNP R HWEAVK IMRY
Sbjct: 985  STDKEKEDMRRVPYASAVGSLMYAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRY 1044

Query: 181  LRGTSSLKLTFGDGKSVLAGYTDSDMARDLDSRKSTSGYLMTFAGGAVSWQSRLQKCVAL 240
            LRGTS LKLTFG GK +L GYTDSDMA D+D+R+STSGYLMTF+GGAVSWQSRLQKCVAL
Sbjct: 1045 LRGTSKLKLTFGSGKPILVGYTDSDMAGDVDNRRSTSGYLMTFSGGAVSWQSRLQKCVAL 1104

Query: 241  STTEVEYITAVEACKEMLWMKRFVQELGFKQQRYVIYCENQSAIHLGKNASFHSRTTYID 300
            STTE EYI A EACKE+LWMK F+QELGFKQQRYV+YC+NQSAIHL KN+++H+R+ +ID
Sbjct: 1105 STTEAEYIAAAEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHID 1164

Query: 301  VRYHLLRDALNDELFELEKIHTDHNGSKMLTKNQPRSKLEFCHSTLGITNSSSK 327
            VRYH +RDALND LFE+EKIHTD+NGS MLTK  PR KL  C S  G+ +S+S+
Sbjct: 1165 VRYHWMRDALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSIAGMISSNSR 1218

[Close]

BLAST of CSPI07G08810 vs. ExPASy TrEMBL
Match: A5C9D7 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_007304 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 8.2e-132
Identity = 252/354 (71.19%), Postives = 282/354 (79.66%), Query Frame = 0


Query: 1    MEEQGYRKTTSDYCVFVQKFSDDDFVILLLYVDDILIVGRNVLRIDNLKKQLSKSFAMKD 60
            M EQGYRKTTSD+CVFVQKFSDDDFVILLLYVDDILIV RNV RIDNLKKQLSKSFAMKD
Sbjct: 949  MGEQGYRKTTSDHCVFVQKFSDDDFVILLLYVDDILIVCRNVSRIDNLKKQLSKSFAMKD 1008

Query: 61   LGPAKKGLGIRIVRDKASEKLYMSQEQHIEKVLERFKMSQEKSVSSLL------------ 120
            LGP K+ LGIRI RD+AS+KL M QEQ+IEKV  RF MS+ K VSS L            
Sbjct: 1009 LGPVKRILGIRIERDRASKKLCMLQEQYIEKVFARFNMSKFKVVSSPLASHFKLSSRHSP 1068

Query: 121  ---------------PIVGSLMYVMVCTRHDIAHDVGVVSRFMSNP-RKHWEAVKCIMRY 180
                             +GSLMY MVCTR DIA+ VGVVSRF+SNP R HWEAVK IMRY
Sbjct: 1069 STDKEKEDMRRVPYASAIGSLMYAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRY 1128

Query: 181  LRGTSSLKLTFGDGKSVLAGYTDSDMARDLDSRKSTSGYLMTFAGGAVSWQSRLQKCVAL 240
            LRGTS LKLTFG GK +L GYTDSDMA D+D+RKSTSGYLMTF+GGAVSWQSRLQKCVAL
Sbjct: 1129 LRGTSKLKLTFGSGKPILVGYTDSDMAGDVDNRKSTSGYLMTFSGGAVSWQSRLQKCVAL 1188

Query: 241  STTEVEYITAVEACKEMLWMKRFVQELGFKQQRYVIYCENQSAIHLGKNASFHSRTTYID 300
            STTE EYI AVEACKE+LWMK F+QELGFKQQRYV+YC+NQSAIHL KN+++H+R+ +ID
Sbjct: 1189 STTEAEYIAAVEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHID 1248

Query: 301  VRYHLLRDALNDELFELEKIHTDHNGSKMLTKNQPRSKLEFCHSTLGITNSSSK 327
            VRYH +RDALND LFE+EKIHTD+NGS MLTK  PR KL  C S  G+ +S+ +
Sbjct: 1249 VRYHWMRDALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSIAGMISSNGR 1302

[Close]

BLAST of CSPI07G08810 vs. ExPASy TrEMBL
Match: A0A438GP95 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2090 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 8.2e-132
Identity = 252/354 (71.19%), Postives = 282/354 (79.66%), Query Frame = 0


Query: 1    MEEQGYRKTTSDYCVFVQKFSDDDFVILLLYVDDILIVGRNVLRIDNLKKQLSKSFAMKD 60
            M EQGYRKTTSD+CVFVQKFSDDDFVILLLYVDDILIV RNV RIDNLKKQLSKSFAMKD
Sbjct: 895  MGEQGYRKTTSDHCVFVQKFSDDDFVILLLYVDDILIVCRNVSRIDNLKKQLSKSFAMKD 954

Query: 61   LGPAKKGLGIRIVRDKASEKLYMSQEQHIEKVLERFKMSQEKSVSSLL------------ 120
            LGP K+ LGIRI RD+AS+KL M QEQ+IEKV  RF MS+ K VSS L            
Sbjct: 955  LGPVKRILGIRIERDRASKKLCMLQEQYIEKVFARFNMSKFKVVSSPLASHFKLSSRHSP 1014

Query: 121  ---------------PIVGSLMYVMVCTRHDIAHDVGVVSRFMSNP-RKHWEAVKCIMRY 180
                             +GSLMY MVCTR DIA+ VGVVSRF+SNP R HWEAVK IMRY
Sbjct: 1015 STDKEKEDMRRVPYASAIGSLMYAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRY 1074

Query: 181  LRGTSSLKLTFGDGKSVLAGYTDSDMARDLDSRKSTSGYLMTFAGGAVSWQSRLQKCVAL 240
            LRGTS LKLTFG GK +L GYTDSDMA D+D+RKSTSGYLMTF+GGAVSWQSRLQKCVAL
Sbjct: 1075 LRGTSKLKLTFGSGKPILVGYTDSDMAGDVDNRKSTSGYLMTFSGGAVSWQSRLQKCVAL 1134

Query: 241  STTEVEYITAVEACKEMLWMKRFVQELGFKQQRYVIYCENQSAIHLGKNASFHSRTTYID 300
            STTE EYI AVEACKE+LWMK F+QELGFKQQRYV+YC+NQSAIHL KN+++H+R+ +ID
Sbjct: 1135 STTEAEYIAAVEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHID 1194

Query: 301  VRYHLLRDALNDELFELEKIHTDHNGSKMLTKNQPRSKLEFCHSTLGITNSSSK 327
            VRYH +RDALND LFE+EKIHTD+NGS MLTK  PR KL  C S  G+ +S+ +
Sbjct: 1195 VRYHWMRDALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSIAGMISSNGR 1248

[Close]

BLAST of CSPI07G08810 vs. NCBI nr
Match: RVW85908.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 482.6 bits (1241), Expect = 2.6e-132
Identity = 252/354 (71.19%), Postives = 283/354 (79.94%), Query Frame = 0


Query: 1    MEEQGYRKTTSDYCVFVQKFSDDDFVILLLYVDDILIVGRNVLRIDNLKKQLSKSFAMKD 60
            M EQGYRKTTSD+CVFVQKFSDDDFVILLLYVDDILIVGRNV RIDNLKKQLSKSFAMKD
Sbjct: 974  MGEQGYRKTTSDHCVFVQKFSDDDFVILLLYVDDILIVGRNVSRIDNLKKQLSKSFAMKD 1033

Query: 61   LGPAKKGLGIRIVRDKASEKLYMSQEQHIEKVLERFKMSQEKSVSSLL------------ 120
            LGP K+ LGIRI RD+AS+KL M QEQ+IEKVL RF MS+ K VSS L            
Sbjct: 1034 LGPVKRILGIRIERDRASKKLCMLQEQYIEKVLARFNMSKAKVVSSPLASHFKLSSRHSP 1093

Query: 121  ---------------PIVGSLMYVMVCTRHDIAHDVGVVSRFMSNP-RKHWEAVKCIMRY 180
                             VGSLMYVMVCTR DIA+ VGVVSRF+SNP R HWEAVK IMRY
Sbjct: 1094 STDKEKEDMRRVPYASAVGSLMYVMVCTRPDIAYSVGVVSRFLSNPGRHHWEAVKWIMRY 1153

Query: 181  LRGTSSLKLTFGDGKSVLAGYTDSDMARDLDSRKSTSGYLMTFAGGAVSWQSRLQKCVAL 240
            LRGTS LKLTFG GK +L GYTDSDMA D+D+R+STSGYL TF+GGAVSWQSRLQKCV L
Sbjct: 1154 LRGTSKLKLTFGSGKPILVGYTDSDMAGDVDNRRSTSGYLTTFSGGAVSWQSRLQKCVVL 1213

Query: 241  STTEVEYITAVEACKEMLWMKRFVQELGFKQQRYVIYCENQSAIHLGKNASFHSRTTYID 300
            STTE EYI A EACKE+LWMK F+QELGFKQQRYV+YC+NQSAIHL KN+++H+R+ +ID
Sbjct: 1214 STTEAEYIAAAEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHID 1273

Query: 301  VRYHLLRDALNDELFELEKIHTDHNGSKMLTKNQPRSKLEFCHSTLGITNSSSK 327
            VRYH +RDALND LFE+EKIHTD+NGS MLTK  PR KL  C S +G+ +S+ +
Sbjct: 1274 VRYHWMRDALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSIVGMISSNGR 1327

[Close]

BLAST of CSPI07G08810 vs. NCBI nr
Match: RVW24009.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 481.9 bits (1239), Expect = 4.5e-132
Identity = 252/354 (71.19%), Postives = 282/354 (79.66%), Query Frame = 0


Query: 1   MEEQGYRKTTSDYCVFVQKFSDDDFVILLLYVDDILIVGRNVLRIDNLKKQLSKSFAMKD 60
           M EQGYRKTTSD+CVFVQKFSDDDFVILLLYVDDILIVGRNV RIDNLKKQLSKSFAMKD
Sbjct: 225 MGEQGYRKTTSDHCVFVQKFSDDDFVILLLYVDDILIVGRNVSRIDNLKKQLSKSFAMKD 284

Query: 61  LGPAKKGLGIRIVRDKASEKLYMSQEQHIEKVLERFKMSQEKSVSSLL------------ 120
           LGP K+ LGIRI RD+AS+KL M QEQ+IEKVL RF M + K VSS L            
Sbjct: 285 LGPVKRILGIRIERDRASKKLCMLQEQYIEKVLARFNMGKAKVVSSPLASHFKLSSRHSP 344

Query: 121 ---------------PIVGSLMYVMVCTRHDIAHDVGVVSRFMSNP-RKHWEAVKCIMRY 180
                            VGSLMY MVCTR DIA+ VGVVSRF+SNP R HWEAVK IMRY
Sbjct: 345 STDKEKEDMRRVPYASAVGSLMYAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRY 404

Query: 181 LRGTSSLKLTFGDGKSVLAGYTDSDMARDLDSRKSTSGYLMTFAGGAVSWQSRLQKCVAL 240
           LRGTS LKLTFG GK +L GYTDSDMA D+D+R+STSGYLMTF+GGAVSWQSRLQKCVAL
Sbjct: 405 LRGTSKLKLTFGSGKPILVGYTDSDMAGDVDNRRSTSGYLMTFSGGAVSWQSRLQKCVAL 464

Query: 241 STTEVEYITAVEACKEMLWMKRFVQELGFKQQRYVIYCENQSAIHLGKNASFHSRTTYID 300
           STTE EYI A EACKE+LWMK F+QELGFKQQRYV+YC+NQSAIHL KN+++H+R+ +ID
Sbjct: 465 STTEAEYIAAAEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHID 524

Query: 301 VRYHLLRDALNDELFELEKIHTDHNGSKMLTKNQPRSKLEFCHSTLGITNSSSK 327
           VRYH +RDALND LFE+EKIHTD+NGS MLTK  PR KL  C S  G+ +S+ +
Sbjct: 525 VRYHWMRDALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSIAGMISSNGR 578

[Close]

BLAST of CSPI07G08810 vs. NCBI nr
Match: RVW24680.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 481.5 bits (1238), Expect = 5.8e-132
Identity = 252/354 (71.19%), Postives = 284/354 (80.23%), Query Frame = 0


Query: 1    MEEQGYRKTTSDYCVFVQKFSDDDFVILLLYVDDILIVGRNVLRIDNLKKQLSKSFAMKD 60
            M EQGYRKTTSD+CVFVQKFSDDDFVILLLYVDDILIVGRNV RID+LKKQLSKSFAMKD
Sbjct: 865  MGEQGYRKTTSDHCVFVQKFSDDDFVILLLYVDDILIVGRNVSRIDSLKKQLSKSFAMKD 924

Query: 61   LGPAKKGLGIRIVRDKASEKLYMSQEQHIEKVLERFKMSQEKSVSSLL------------ 120
            LGP K+ LGIRI +D+AS+KL M QEQ+IEKVL RF MS+ K VSS L            
Sbjct: 925  LGPVKRILGIRIEQDRASKKLCMLQEQYIEKVLARFNMSKAKVVSSPLASHFKLSSRHSP 984

Query: 121  ---------------PIVGSLMYVMVCTRHDIAHDVGVVSRFMSNP-RKHWEAVKCIMRY 180
                             VGSLMY MVCTR DIA+ VGVVSRF+SNP R HWEAVK IMRY
Sbjct: 985  STDKEKEDMRRVPYASAVGSLMYAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRY 1044

Query: 181  LRGTSSLKLTFGDGKSVLAGYTDSDMARDLDSRKSTSGYLMTFAGGAVSWQSRLQKCVAL 240
            LRGTS LKLTFG GK +L GYTDSDMA D+D+R+STSGYLMTF+GGAVSWQSRLQKCVAL
Sbjct: 1045 LRGTSKLKLTFGSGKPILVGYTDSDMAGDVDNRRSTSGYLMTFSGGAVSWQSRLQKCVAL 1104

Query: 241  STTEVEYITAVEACKEMLWMKRFVQELGFKQQRYVIYCENQSAIHLGKNASFHSRTTYID 300
            STTE EYI A EACKE+LWMK F+QELGFKQQRYV+YC+NQSAIHL KN+++H+R+ +ID
Sbjct: 1105 STTEAEYIAAAEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHID 1164

Query: 301  VRYHLLRDALNDELFELEKIHTDHNGSKMLTKNQPRSKLEFCHSTLGITNSSSK 327
            VRYH +RDALND LFE+EKIHTD+NGS MLTK  PR KL  C S  G+ +S+S+
Sbjct: 1165 VRYHWMRDALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSIAGMISSNSR 1218

[Close]

BLAST of CSPI07G08810 vs. NCBI nr
Match: CAN75440.1 (hypothetical protein VITISV_007304 [Vitis vinifera])

HSP 1 Score: 479.9 bits (1234), Expect = 1.7e-131
Identity = 252/354 (71.19%), Postives = 282/354 (79.66%), Query Frame = 0


Query: 1    MEEQGYRKTTSDYCVFVQKFSDDDFVILLLYVDDILIVGRNVLRIDNLKKQLSKSFAMKD 60
            M EQGYRKTTSD+CVFVQKFSDDDFVILLLYVDDILIV RNV RIDNLKKQLSKSFAMKD
Sbjct: 949  MGEQGYRKTTSDHCVFVQKFSDDDFVILLLYVDDILIVCRNVSRIDNLKKQLSKSFAMKD 1008

Query: 61   LGPAKKGLGIRIVRDKASEKLYMSQEQHIEKVLERFKMSQEKSVSSLL------------ 120
            LGP K+ LGIRI RD+AS+KL M QEQ+IEKV  RF MS+ K VSS L            
Sbjct: 1009 LGPVKRILGIRIERDRASKKLCMLQEQYIEKVFARFNMSKFKVVSSPLASHFKLSSRHSP 1068

Query: 121  ---------------PIVGSLMYVMVCTRHDIAHDVGVVSRFMSNP-RKHWEAVKCIMRY 180
                             +GSLMY MVCTR DIA+ VGVVSRF+SNP R HWEAVK IMRY
Sbjct: 1069 STDKEKEDMRRVPYASAIGSLMYAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRY 1128

Query: 181  LRGTSSLKLTFGDGKSVLAGYTDSDMARDLDSRKSTSGYLMTFAGGAVSWQSRLQKCVAL 240
            LRGTS LKLTFG GK +L GYTDSDMA D+D+RKSTSGYLMTF+GGAVSWQSRLQKCVAL
Sbjct: 1129 LRGTSKLKLTFGSGKPILVGYTDSDMAGDVDNRKSTSGYLMTFSGGAVSWQSRLQKCVAL 1188

Query: 241  STTEVEYITAVEACKEMLWMKRFVQELGFKQQRYVIYCENQSAIHLGKNASFHSRTTYID 300
            STTE EYI AVEACKE+LWMK F+QELGFKQQRYV+YC+NQSAIHL KN+++H+R+ +ID
Sbjct: 1189 STTEAEYIAAVEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHID 1248

Query: 301  VRYHLLRDALNDELFELEKIHTDHNGSKMLTKNQPRSKLEFCHSTLGITNSSSK 327
            VRYH +RDALND LFE+EKIHTD+NGS MLTK  PR KL  C S  G+ +S+ +
Sbjct: 1249 VRYHWMRDALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSIAGMISSNGR 1302

[Close]

BLAST of CSPI07G08810 vs. NCBI nr
Match: RVW74036.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 479.9 bits (1234), Expect = 1.7e-131
Identity = 252/354 (71.19%), Postives = 282/354 (79.66%), Query Frame = 0


Query: 1    MEEQGYRKTTSDYCVFVQKFSDDDFVILLLYVDDILIVGRNVLRIDNLKKQLSKSFAMKD 60
            M EQGYRKTTSD+CVFVQKFSDDDFVILLLYVDDILIV RNV RIDNLKKQLSKSFAMKD
Sbjct: 895  MGEQGYRKTTSDHCVFVQKFSDDDFVILLLYVDDILIVCRNVSRIDNLKKQLSKSFAMKD 954

Query: 61   LGPAKKGLGIRIVRDKASEKLYMSQEQHIEKVLERFKMSQEKSVSSLL------------ 120
            LGP K+ LGIRI RD+AS+KL M QEQ+IEKV  RF MS+ K VSS L            
Sbjct: 955  LGPVKRILGIRIERDRASKKLCMLQEQYIEKVFARFNMSKFKVVSSPLASHFKLSSRHSP 1014

Query: 121  ---------------PIVGSLMYVMVCTRHDIAHDVGVVSRFMSNP-RKHWEAVKCIMRY 180
                             +GSLMY MVCTR DIA+ VGVVSRF+SNP R HWEAVK IMRY
Sbjct: 1015 STDKEKEDMRRVPYASAIGSLMYAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRY 1074

Query: 181  LRGTSSLKLTFGDGKSVLAGYTDSDMARDLDSRKSTSGYLMTFAGGAVSWQSRLQKCVAL 240
            LRGTS LKLTFG GK +L GYTDSDMA D+D+RKSTSGYLMTF+GGAVSWQSRLQKCVAL
Sbjct: 1075 LRGTSKLKLTFGSGKPILVGYTDSDMAGDVDNRKSTSGYLMTFSGGAVSWQSRLQKCVAL 1134

Query: 241  STTEVEYITAVEACKEMLWMKRFVQELGFKQQRYVIYCENQSAIHLGKNASFHSRTTYID 300
            STTE EYI AVEACKE+LWMK F+QELGFKQQRYV+YC+NQSAIHL KN+++H+R+ +ID
Sbjct: 1135 STTEAEYIAAVEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHID 1194

Query: 301  VRYHLLRDALNDELFELEKIHTDHNGSKMLTKNQPRSKLEFCHSTLGITNSSSK 327
            VRYH +RDALND LFE+EKIHTD+NGS MLTK  PR KL  C S  G+ +S+ +
Sbjct: 1195 VRYHWMRDALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSIAGMISSNGR 1248

[Close]

BLAST of CSPI07G08810 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-32
Identity = 94/300 (31.33%), Postives = 158/300 (52.67%), Query Frame = 0


Query: 5   GYRKTTSDYCVFVQKFSDDDFVILLLYVDDILIVGRNVLRIDNLKKQLSKSFAMKDLGPA 64
           G+ ++ SD+  F+ K +   F+ +L+YVDDI+I   N   +D LK QL   F ++DLGP 
Sbjct: 258 GFVQSHSDHTYFL-KITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPL 317

Query: 65  KKGLGIRIVRDKASEKLYMSQEQHIEKVLER--------FKMSQEKSVS----------- 124
           K  LG+ I R  A   + + Q ++   +L+           +  + SV+           
Sbjct: 318 KYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVD 377

Query: 125 --SLLPIVGSLMYVMVCTRHDIAHDVGVVSRFMSNPR-KHWEAVKCIMRYLRGTSSLKLT 184
             +   ++G LMY+ + TR DI+  V  +S+F   PR  H +AV  I+ Y++GT    L 
Sbjct: 378 AKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLF 437

Query: 185 F-GDGKSVLAGYTDSDMARDLDSRKSTSGYLMTFAGGAVSWQSRLQKCVALSTTEVEYIT 244
           +    +  L  ++D+      D+R+ST+GY M      +SW+S+ Q+ V+ S+ E EY  
Sbjct: 438 YSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRA 497

Query: 245 AVEACKEMLWMKRFVQELGFKQQR-YVIYCENQSAIHLGKNASFHSRTTYIDVRYHLLRD 281
              A  EM+W+ +F +EL     +  +++C+N +AIH+  NA FH RT +I+   H +R+
Sbjct: 498 LSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553

[Close]

BLAST of CSPI07G08810 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 4.4e-21
Identity = 74/226 (32.74%), Postives = 116/226 (51.33%), Query Frame = 0


Query: 28  LLLYVDDILIVGRNVLRIDNLKKQLSKSFAMKDLGPAKKGLGIRIVRDKASEKLYMSQEQ 87
           LLLYVDDIL+ G +   ++ L  QLS +F+MKDLGP    LGI+I    +   L++SQ +
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQTK 62

Query: 88  HIEKVLERFKMSQEKSVSSLLP--------------------IVGSLMYVMVCTRHDIAH 147
           + E++L    M   K +S+ LP                    IVG+L Y +  TR DI++
Sbjct: 63  YAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQY-LTLTRPDISY 122

Query: 148 DVGVVSRFMSNPR-KHWEAVKCIMRYLRGTSSLKL-TFGDGKSVLAGYTDSDMARDLDSR 207
            V +V + M  P    ++ +K ++RY++GT    L    + K  +  + DSD A    +R
Sbjct: 123 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 182

Query: 208 KSTSGYLMTFAGGAVSWQSRLQKCVALSTTEVEYITAVEACKEMLW 232
           +ST+G+        +SW ++ Q  V+ S+TE EY        E+ W
Sbjct: 183 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

The following BLAST results are available for this feature:

BLAST of CSPI07G08810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.9e-101	55.17	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.7e-47	32.56	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	1.8e-35	32.84	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	4.2e-32	31.53	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P0CV72	2.0e-26	49.61	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]

BLAST of CSPI07G08810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438HN89	1.3e-132	71.19	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A0A438CLF9	2.2e-132	71.19	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A0A438CN91	2.8e-132	71.19	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A5C9D7	8.2e-132	71.19	Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI...	[more]
A0A438GP95	8.2e-132	71.19	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]

BLAST of CSPI07G08810 vs. NCBI nr


Match Name	E-value	Identity	Description
RVW85908.1	2.6e-132	71.19	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
RVW24009.1	4.5e-132	71.19	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
RVW24680.1	5.8e-132	71.19	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
CAN75440.1	1.7e-131	71.19	hypothetical protein VITISV_007304 [Vitis vinifera]	[more]
RVW74036.1	1.7e-131	71.19	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]

BLAST of CSPI07G08810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.5e-32	31.33	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	4.4e-21	32.74	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 3..104 e-value: 5.7E-18 score: 65.4
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 151..264
None	No IPR available	PANTHER	PTHR11439:SF301	SUBFAMILY NOT NAMED	coord: 151..264
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 172..308 e-value: 2.65803E-62 score: 192.683
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 19..276

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G08810.1	CSPI07G08810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding