CSPI06G11480 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAACTCTTTTCCTCTCTCTCTCTCTCTCTCTAACCCATCCCCCAAAAAGCTTTTATAAAAAGCACTTAACAAAATCAACTCCAAAAACCCTCAACCACTTTCTTCTCAAATCCTTTCCATAATCCCCAACTACTACTTTGATTTACATTAATCATCTTCTCTCCTTCTTATGGCGACCGGAAAAAGCTGTTACGGTCGTCGTTCCAGTTACCGTTTCCTCCCCGGCGACATCTCCGGCCACCACTCCTTCACTTCCGATTTCTCATTTGAACTAAACGAATCTGACATTTACAACTCAGGTAGTACGGCGAGATCTCCTACGCGAATCGCGAAGAAGAAAGTTTCATCGAAACGATCGGTGGAGGTGGGGGGAGGTGGAGGTGGAGCGTCTTCGTTGCCGGTGAATATTCCGGATTGGTCGAAGATTTTGAAGGAGGAATATAGAGAGAAGAGGAGTTTGGAATACGCGGACGATATGGAAGAGGATGAAGAGGAAGAAGAAGAAATGAGAGTTCCACCTCACGAGTTCTTGGCAAGGCAAATGGCGAGGACGAGGATCGCATCGTTTTCGGTGCACGAAGGAATTGGGAGGACGTTGAAGGGGAGAGATCTGAGTAGGGTAAGAAATGCAATTTGGGAAAAAACTGGGTTCGAGGACTGAAAGAAAATAATTATATATATATATATTGGATGAGATTAATTAATTTAACGCAAGTAGTTTTCTTTTTTTCTATTTTAGGACGTAAATATTTGTTGTTAAAATGAAAAGGAAGGAATGATACATATATGTATGTATGTATGTAATTTCTTCCTTTTCCAATGTCGTTTTTCTTTCTTTTTAATTTGTTTTTCAGCTTTGCCATATTGGCGTAACGCTGGTTGAATTTGTGGGGAATGGATGGATGGATGGATGGATGATATATTCCACTATATTATTAAATGATTGTAAAATATTTAAAATACTAAGC AAAAAAAAAACTCTTTTCCTCTCTCTCTCTCTCTCTCTAACCCATCCCCCAAAAAGCTTTTATAAAAAGCACTTAACAAAATCAACTCCAAAAACCCTCAACCACTTTCTTCTCAAATCCTTTCCATAATCCCCAACTACTACTTTGATTTACATTAATCATCTTCTCTCCTTCTTATGGCGACCGGAAAAAGCTGTTACGGTCGTCGTTCCAGTTACCGTTTCCTCCCCGGCGACATCTCCGGCCACCACTCCTTCACTTCCGATTTCTCATTTGAACTAAACGAATCTGACATTTACAACTCAGGTAGTACGGCGAGATCTCCTACGCGAATCGCGAAGAAGAAAGTTTCATCGAAACGATCGGTGGAGGTGGGGGGAGGTGGAGGTGGAGCGTCTTCGTTGCCGGTGAATATTCCGGATTGGTCGAAGATTTTGAAGGAGGAATATAGAGAGAAGAGGAGTTTGGAATACGCGGACGATATGGAAGAGGATGAAGAGGAAGAAGAAGAAATGAGAGTTCCACCTCACGAGTTCTTGGCAAGGCAAATGGCGAGGACGAGGATCGCATCGTTTTCGGTGCACGAAGGAATTGGGAGGACGTTGAAGGGGAGAGATCTGAGTAGGGTAAGAAATGCAATTTGGGAAAAAACTGGGTTCGAGGACTGAAAGAAAATAATTATATATATATATATTGGATGAGATTAATTAATTTAACGCAAGTAGTTTTCTTTTTTTCTATTTTAGGACGTAAATATTTGTTGTTAAAATGAAAAGGAAGGAATGATACATATATGTATGTATGTATGTAATTTCTTCCTTTTCCAATGTCGTTTTTCTTTCTTTTTAATTTGTTTTTCAGCTTTGCCATATTGGCGTAACGCTGGTTGAATTTGTGGGGAATGGATGGATGGATGGATGGATGATATATTCCACTATATTATTAAATGATTGTAAAATATTTAAAATACTAAGC ATGGCGACCGGAAAAAGCTGTTACGGTCGTCGTTCCAGTTACCGTTTCCTCCCCGGCGACATCTCCGGCCACCACTCCTTCACTTCCGATTTCTCATTTGAACTAAACGAATCTGACATTTACAACTCAGGTAGTACGGCGAGATCTCCTACGCGAATCGCGAAGAAGAAAGTTTCATCGAAACGATCGGTGGAGGTGGGGGGAGGTGGAGGTGGAGCGTCTTCGTTGCCGGTGAATATTCCGGATTGGTCGAAGATTTTGAAGGAGGAATATAGAGAGAAGAGGAGTTTGGAATACGCGGACGATATGGAAGAGGATGAAGAGGAAGAAGAAGAAATGAGAGTTCCACCTCACGAGTTCTTGGCAAGGCAAATGGCGAGGACGAGGATCGCATCGTTTTCGGTGCACGAAGGAATTGGGAGGACGTTGAAGGGGAGAGATCTGAGTAGGGTAAGAAATGCAATTTGGGAAAAAACTGGGTTCGAGGACTGA MATGKSCYGRRSSYRFLPGDISGHHSFTSDFSFELNESDIYNSGSTARSPTRIAKKKVSSKRSVEVGGGGGGASSLPVNIPDWSKILKEEYREKRSLEYADDMEEDEEEEEEMRVPPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED* Homology
BLAST of CSPI06G11480 vs. ExPASy TrEMBL
Match: A0A0A0KBD5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G141350 PE=4 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 6.0e-83 Identity = 163/165 (98.79%), Postives = 163/165 (98.79%), Query Frame = 0
BLAST of CSPI06G11480 vs. ExPASy TrEMBL
Match: A0A5A7SXR0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00170 PE=4 SV=1) HSP 1 Score: 276.9 bits (707), Expect = 5.3e-71 Identity = 151/166 (90.96%), Postives = 155/166 (93.37%), Query Frame = 0
BLAST of CSPI06G11480 vs. ExPASy TrEMBL
Match: A0A1S3CKD1 (uncharacterized protein LOC103501949 OS=Cucumis melo OX=3656 GN=LOC103501949 PE=4 SV=1) HSP 1 Score: 276.9 bits (707), Expect = 5.3e-71 Identity = 151/166 (90.96%), Postives = 155/166 (93.37%), Query Frame = 0
BLAST of CSPI06G11480 vs. ExPASy TrEMBL
Match: A0A6J1KAF0 (uncharacterized protein LOC111491571 OS=Cucurbita maxima OX=3661 GN=LOC111491571 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 7.9e-59 Identity = 132/169 (78.11%), Postives = 140/169 (82.84%), Query Frame = 0
BLAST of CSPI06G11480 vs. ExPASy TrEMBL
Match: A0A6J1H2V6 (uncharacterized protein LOC111459858 OS=Cucurbita moschata OX=3662 GN=LOC111459858 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 9.1e-55 Identity = 128/169 (75.74%), Postives = 134/169 (79.29%), Query Frame = 0
BLAST of CSPI06G11480 vs. NCBI nr
Match: XP_004145741.1 (uncharacterized protein LOC101215539 [Cucumis sativus] >KGN46838.1 hypothetical protein Csa_021100 [Cucumis sativus]) HSP 1 Score: 316.6 bits (810), Expect = 1.2e-82 Identity = 163/165 (98.79%), Postives = 163/165 (98.79%), Query Frame = 0
BLAST of CSPI06G11480 vs. NCBI nr
Match: XP_008463944.1 (PREDICTED: uncharacterized protein LOC103501949 [Cucumis melo] >KAA0035343.1 uncharacterized protein E6C27_scaffold228G001470 [Cucumis melo var. makuwa] >TYK14294.1 uncharacterized protein E5676_scaffold84G00170 [Cucumis melo var. makuwa]) HSP 1 Score: 276.9 bits (707), Expect = 1.1e-70 Identity = 151/166 (90.96%), Postives = 155/166 (93.37%), Query Frame = 0
BLAST of CSPI06G11480 vs. NCBI nr
Match: XP_038901889.1 (uncharacterized protein LOC120088567 [Benincasa hispida]) HSP 1 Score: 248.4 bits (633), Expect = 4.2e-62 Identity = 141/171 (82.46%), Postives = 149/171 (87.13%), Query Frame = 0
BLAST of CSPI06G11480 vs. NCBI nr
Match: KAG6605549.1 (hypothetical protein SDJN03_02866, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013893.1 hypothetical protein SDJN02_24062, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 236.9 bits (603), Expect = 1.3e-58 Identity = 133/169 (78.70%), Postives = 139/169 (82.25%), Query Frame = 0
BLAST of CSPI06G11480 vs. NCBI nr
Match: XP_022996303.1 (uncharacterized protein LOC111491571 [Cucurbita maxima]) HSP 1 Score: 236.5 bits (602), Expect = 1.6e-58 Identity = 132/169 (78.11%), Postives = 140/169 (82.84%), Query Frame = 0
BLAST of CSPI06G11480 vs. TAIR 10
Match: AT5G60680.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 134.8 bits (338), Expect = 6.2e-32 Identity = 86/170 (50.59%), Postives = 108/170 (63.53%), Query Frame = 0
BLAST of CSPI06G11480 vs. TAIR 10
Match: AT2G28400.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 122.5 bits (306), Expect = 3.2e-28 Identity = 84/171 (49.12%), Postives = 109/171 (63.74%), Query Frame = 0
BLAST of CSPI06G11480 vs. TAIR 10
Match: AT3G45210.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 118.6 bits (296), Expect = 4.6e-27 Identity = 82/164 (50.00%), Postives = 106/164 (64.63%), Query Frame = 0
BLAST of CSPI06G11480 vs. TAIR 10
Match: AT5G03230.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 108.2 bits (269), Expect = 6.3e-24 Identity = 67/145 (46.21%), Postives = 90/145 (62.07%), Query Frame = 0
BLAST of CSPI06G11480 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 103.2 bits (256), Expect = 2.0e-22 Identity = 60/135 (44.44%), Postives = 90/135 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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