CSPI05G14910 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGACCGATATCTTTGATTTCTTAGTTGACATTGTTCCTAGGGATGAGATCAAGGATGAGGCTAGGATGGGCGGTATGGTTGGAGCTACTGTTAGTGGAGTTCCCTACTATTATCCGCCTATAGGTCAACCTGTGGGGGCTCCCGGGGGAATGATGATTGGAAGACCGACAATGGATCCCACTGGAGTTTACGCTCAGCCGTCGTCCTAG ATGAGGACCGATATCTTTGATTTCTTAGTTGACATTGTTCCTAGGGATGAGATCAAGGATGAGGCTAGGATGGGCGGTATGGTTGGAGCTACTGTTAGTGGAGTTCCCTACTATTATCCGCCTATAGGTCAACCTGTGGGGGCTCCCGGGGGAATGATGATTGGAAGACCGACAATGGATCCCACTGGAGTTTACGCTCAGCCGTCGTCCTAG ATGAGGACCGATATCTTTGATTTCTTAGTTGACATTGTTCCTAGGGATGAGATCAAGGATGAGGCTAGGATGGGCGGTATGGTTGGAGCTACTGTTAGTGGAGTTCCCTACTATTATCCGCCTATAGGTCAACCTGTGGGGGCTCCCGGGGGAATGATGATTGGAAGACCGACAATGGATCCCACTGGAGTTTACGCTCAGCCGTCGTCCTAG MRTDIFDFLVDIVPRDEIKDEARMGGMVGATVSGVPYYYPPIGQPVGAPGGMMIGRPTMDPTGVYAQPSS* Homology
BLAST of CSPI05G14910 vs. ExPASy Swiss-Prot
Match: Q9SMP0 (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NFYC1 PE=1 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 2.6e-24 Identity = 58/72 (80.56%), Postives = 60/72 (83.33%), Query Frame = 0
BLAST of CSPI05G14910 vs. ExPASy Swiss-Prot
Match: Q9FMV5 (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana OX=3702 GN=NFYC4 PE=1 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 1.9e-22 Identity = 53/75 (70.67%), Postives = 57/75 (76.00%), Query Frame = 0
BLAST of CSPI05G14910 vs. ExPASy Swiss-Prot
Match: Q9ZVL3 (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NFYC3 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.1e-09 Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = 0
BLAST of CSPI05G14910 vs. ExPASy Swiss-Prot
Match: A6BLW4 (Nuclear transcription factor Y subunit C-2 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYC2 PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 2.0e-08 Identity = 30/55 (54.55%), Postives = 36/55 (65.45%), Query Frame = 0
BLAST of CSPI05G14910 vs. ExPASy Swiss-Prot
Match: Q8L4B2 (Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana OX=3702 GN=NFYC9 PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 2.9e-07 Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 0
BLAST of CSPI05G14910 vs. ExPASy TrEMBL
Match: A0A5D3BF73 (Nuclear transcription factor Y subunit C-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00510 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.4e-28 Identity = 62/69 (89.86%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of CSPI05G14910 vs. ExPASy TrEMBL
Match: A0A0A0LNK7 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G001515 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.4e-28 Identity = 62/69 (89.86%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of CSPI05G14910 vs. ExPASy TrEMBL
Match: A0A6J1C352 (nuclear transcription factor Y subunit C-1-like OS=Momordica charantia OX=3673 GN=LOC111007012 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.4e-28 Identity = 62/69 (89.86%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of CSPI05G14910 vs. ExPASy TrEMBL
Match: A0A1S3CLW7 (nuclear transcription factor Y subunit C-1 OS=Cucumis melo OX=3656 GN=LOC103502320 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.4e-28 Identity = 62/69 (89.86%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of CSPI05G14910 vs. ExPASy TrEMBL
Match: A0A6J1JJG4 (nuclear transcription factor Y subunit C-1 OS=Cucurbita maxima OX=3661 GN=LOC111484989 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 5.3e-28 Identity = 61/69 (88.41%), Postives = 63/69 (91.30%), Query Frame = 0
BLAST of CSPI05G14910 vs. NCBI nr
Match: XP_038878995.1 (nuclear transcription factor Y subunit C-1 [Benincasa hispida]) HSP 1 Score: 134.8 bits (338), Expect = 2.9e-28 Identity = 62/69 (89.86%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of CSPI05G14910 vs. NCBI nr
Match: XP_004138046.1 (nuclear transcription factor Y subunit C-1 [Cucumis sativus] >KGN63480.1 hypothetical protein Csa_013346 [Cucumis sativus]) HSP 1 Score: 134.8 bits (338), Expect = 2.9e-28 Identity = 62/69 (89.86%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of CSPI05G14910 vs. NCBI nr
Match: XP_008464428.1 (PREDICTED: nuclear transcription factor Y subunit C-1 [Cucumis melo]) HSP 1 Score: 134.8 bits (338), Expect = 2.9e-28 Identity = 62/69 (89.86%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of CSPI05G14910 vs. NCBI nr
Match: KAA0057769.1 (nuclear transcription factor Y subunit C-1 [Cucumis melo var. makuwa] >TYJ98450.1 nuclear transcription factor Y subunit C-1 [Cucumis melo var. makuwa]) HSP 1 Score: 134.8 bits (338), Expect = 2.9e-28 Identity = 62/69 (89.86%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of CSPI05G14910 vs. NCBI nr
Match: XP_022134838.1 (nuclear transcription factor Y subunit C-1-like [Momordica charantia]) HSP 1 Score: 134.8 bits (338), Expect = 2.9e-28 Identity = 62/69 (89.86%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of CSPI05G14910 vs. TAIR 10
Match: AT3G48590.1 (nuclear factor Y, subunit C1 ) HSP 1 Score: 112.1 bits (279), Expect = 1.9e-25 Identity = 58/72 (80.56%), Postives = 60/72 (83.33%), Query Frame = 0
BLAST of CSPI05G14910 vs. TAIR 10
Match: AT5G63470.1 (nuclear factor Y, subunit C4 ) HSP 1 Score: 105.9 bits (263), Expect = 1.3e-23 Identity = 53/75 (70.67%), Postives = 57/75 (76.00%), Query Frame = 0
BLAST of CSPI05G14910 vs. TAIR 10
Match: AT5G63470.2 (nuclear factor Y, subunit C4 ) HSP 1 Score: 105.9 bits (263), Expect = 1.3e-23 Identity = 53/75 (70.67%), Postives = 57/75 (76.00%), Query Frame = 0
BLAST of CSPI05G14910 vs. TAIR 10
Match: AT1G54830.2 (nuclear factor Y, subunit C3 ) HSP 1 Score: 63.5 bits (153), Expect = 7.6e-11 Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = 0
BLAST of CSPI05G14910 vs. TAIR 10
Match: AT1G54830.1 (nuclear factor Y, subunit C3 ) HSP 1 Score: 63.5 bits (153), Expect = 7.6e-11 Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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