CSPI05G01840 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G01840
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Integrator complex subunit 7
Location	Chr5: 2502124 .. 2503945 (-)
RNA-Seq Expression	CSPI05G01840
Synteny	CSPI05G01840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATACTACCAAGCTCTCTACTACTCAACCTTCTTCTTCTTCTTTCTTTCTCTTGATTCCCTAACGTTAAGTTTGTAAAGAAACCAAGGAATACACTTTCTATAATCCCCTGATTCAAAATTGTACTCCATTTTACCTCCAATTCCACAGGGTTTCTGCTTCCCCATTTGTGTTATAGGGTTCCACAGAAGATGGCATTGGATGAGAATATTGTGTTGCGCGATGTCACTAATGCTGGCATTGTCATCAGCGACCGCACTGTCAAACACCAGAGGCGCTGTATTAAGTAATTGGGTTTGAAGATTTGGATGCCGTGTGCTGTGGTAGGGACTATTTGGTGATGGTTTTATTAAGGGGTTCTATGGTTTCAGAGTTTATGTGTGTCTGTGACTAGCTATCATTTTTGGTCATTTGCTACAAATATGGAGAGAAGTTCTGCAGCTTGCGCTATGGAATGGAGTATTGAGCTGGAGAAGGCTCTCCGTTTGAAGAAACCAGGTTCGTCAATCGTCTGACTGATCTCTGTTCTTTAATTTCAAACGAAAACTGCCCAGTTTAGTTTCTAAAGTAGAGTAATCTGAGAAGAAAGGCTGCTTGTCTCTAGATTTCTTATCGGCTGTGAAATAAATTTAAACAACATTGATATCTAGTTTGGTACAGTAATAGGACTCTATTGATGAGCAATAATACTTGTAATTTCTGGTTTATTCAGGTCGGGCTGTTGAAGCTATACGTCAGATTGGCTGTCGACTTCAGCAATGGAGTAGAGAGCCAGAACCCAATGTAGCTGTATATAATATGTTTGACCTTGTTACTTGGGAGGATAGGCTATTTTCCAACACTATTCTCCTACGGCTTGCTGATGCCTTTAAGTTTGATGATAAGCATATTAGACTTGCAGTTGTTAGAGTTTTCTTATCCGAGCTATATAGCCGCGACAGCTCACGAAGTAAACAATACCAAGGGATTCTTTCAAAGGCAAGGGTGCAAAATCACCATGAATTACTTACTCGAGTCAAGGTTGTTCTTAATGGAGGGGATCCTGAGGCTAGAGGTCTAGCTTTGATTCTATTGGGATGTTGGGCACATTTTGCAAAAGACAGTGCCCAGATACGTTATTTGATATTTTCTAGTCTGTTTTCTTCTCATCTTTCGGAGGTAAGATTGCCTTGTACAATATTTTTTTCTACCAAAAATTTTGACATTTTTTTACAATCTTAGTGTATGTTTCCAATAGGGTTCAGTGCAGAAGTTGAAAGTTGCCTTATGATGAAAGAATATTTAAGAAATTTTTTTGTTCCTTTTCTTGCTTAATAAGGGTTCAGTATAATATACCGTTGAAGCTAGAATAATTCTAATCATCATTATTTAGAAAAATGTCATGGATGCTCTCGAACCTACCAAATTTTATACTGCCTCTAATAATTTCATTTACCTAAGGTTTAGCCCTGATTTATTGTGAGTTGTGTTGTATTAGTGGATTAATAGGAAATTTAACAAAGTGTAGGTAAAGCTAGACCCGATTTTATGTATAATGGACATTCCTGTTAAAGAAGAGACTCTTTTCCTTCTTCACAAAGTTTTAGGCATATTTTAAACCATGGGCATTCTCTTATACAGGTAAAAGCGTCAATATTTGCTGCAGCATGCATTTGTCAGTTAGCAGATGACTTTGCGCAAGTTTTCTTAGCGATTTTGGTTAATATAATGACTTCTACTACATCCTTGACCATCAGAATGGCTGGAGCTCGAGTTTTTGCAAAACTGGGATGCTCACATTCAATGGCCAAAACTGCTTATAAGGTTATGCTCGTCTTTTGA

mRNA sequence

CAAATACTACCAAGCTCTCTACTACTCAACCTTCTTCTTCTTCTTTCTTTCTCTTGATTCCCTAACGTTAAGTTTGTAAAGAAACCAAGGAATACACTTTCTATAATCCCCTGATTCAAAATTGTACTCCATTTTACCTCCAATTCCACAGGGTTTCTGCTTCCCCATTTGTGTTATAGGGTTCCACAGAAGATGGCATTGGATGAGAATATTGTGTTGCGCGATGTCACTAATGCTGGCATTGTCATCAGCGACCGCACTGTCAAACACCAGAGGCGCTGTATTAAGTAATTGGGTTTGAAGATTTGGATGCCGTGTGCTGTGGTAGGGACTATTTGGTGATGGTTTTATTAAGGGGTTCTATGGTTTCAGAGTTTATGTGTGTCTGTGACTAGCTATCATTTTTGGTCATTTGCTACAAATATGGAGAGAAGTTCTGCAGCTTGCGCTATGGAATGGAGTATTGAGCTGGAGAAGGCTCTCCGTTTGAAGAAACCAGGTCGGGCTGTTGAAGCTATACGTCAGATTGGCTGTCGACTTCAGCAATGGAGTAGAGAGCCAGAACCCAATGTAGCTGTATATAATATGTTTGACCTTGTTACTTGGGAGGATAGGCTATTTTCCAACACTATTCTCCTACGGCTTGCTGATGCCTTTAAGTTTGATGATAAGCATATTAGACTTGCAGTTGTTAGAGTTTTCTTATCCGAGCTATATAGCCGCGACAGCTCACGAAGTAAACAATACCAAGGGATTCTTTCAAAGGCAAGGGTGCAAAATCACCATGAATTACTTACTCGAGTCAAGGTTGTTCTTAATGGAGGGGATCCTGAGGCTAGAGGTCTAGCTTTGATTCTATTGGGATGTTGGGCACATTTTGCAAAAGACAGTGCCCAGATACGTTATTTGATATTTTCTAGTCTGTTTTCTTCTCATCTTTCGGAGGTAAAAGCGTCAATATTTGCTGCAGCATGCATTTGTCAGTTAGCAGATGACTTTGCGCAAGTTTTCTTAGCGATTTTGGTTAATATAATGACTTCTACTACATCCTTGACCATCAGAATGGCTGGAGCTCGAGTTTTTGCAAAACTGGGATGCTCACATTCAATGGCCAAAACTGCTTATAAGGTTATGCTCGTCTTTTGA

Coding sequence (CDS)

ATGGAGAGAAGTTCTGCAGCTTGCGCTATGGAATGGAGTATTGAGCTGGAGAAGGCTCTCCGTTTGAAGAAACCAGGTCGGGCTGTTGAAGCTATACGTCAGATTGGCTGTCGACTTCAGCAATGGAGTAGAGAGCCAGAACCCAATGTAGCTGTATATAATATGTTTGACCTTGTTACTTGGGAGGATAGGCTATTTTCCAACACTATTCTCCTACGGCTTGCTGATGCCTTTAAGTTTGATGATAAGCATATTAGACTTGCAGTTGTTAGAGTTTTCTTATCCGAGCTATATAGCCGCGACAGCTCACGAAGTAAACAATACCAAGGGATTCTTTCAAAGGCAAGGGTGCAAAATCACCATGAATTACTTACTCGAGTCAAGGTTGTTCTTAATGGAGGGGATCCTGAGGCTAGAGGTCTAGCTTTGATTCTATTGGGATGTTGGGCACATTTTGCAAAAGACAGTGCCCAGATACGTTATTTGATATTTTCTAGTCTGTTTTCTTCTCATCTTTCGGAGGTAAAAGCGTCAATATTTGCTGCAGCATGCATTTGTCAGTTAGCAGATGACTTTGCGCAAGTTTTCTTAGCGATTTTGGTTAATATAATGACTTCTACTACATCCTTGACCATCAGAATGGCTGGAGCTCGAGTTTTTGCAAAACTGGGATGCTCACATTCAATGGCCAAAACTGCTTATAAGGTTATGCTCGTCTTTTGA

Protein sequence

MERSSAACAMEWSIELEKALRLKKPGRAVEAIRQIGCRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLADAFKFDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNHHELLTRVKVVLNGGDPEARGLALILLGCWAHFAKDSAQIRYLIFSSLFSSHLSEVKASIFAAACICQLADDFAQVFLAILVNIMTSTTSLTIRMAGARVFAKLGCSHSMAKTAYKVMLVF*

Homology

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BLAST of CSPI05G01840 vs. ExPASy Swiss-Prot
Match: Q54PL2 (Integrator complex subunit 7 homolog OS=Dictyostelium discoideum OX=44689 GN=ints7 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 8.4e-06
Identity = 47/179 (26.26%), Postives = 87/179 (48.60%), Query Frame = 0


Query: 65  LFSNTILLRLADAFKFDDKHIRLAVVRVF---LSELYSRDSSRSKQYQGILSKARVQNHH 124
           L  N+++ RL+D F+     ++  +++VF    SE++                 +V N  
Sbjct: 161 LIVNSVITRLSDIFRTTSNTVKYRILKVFQECSSEIH-----------------KVSNIE 220

Query: 125 ELLTRVKVVLNGGDPEARGLALILLGCWAHFAKDSAQIRYLIFSSLFSSHLSEVKASIFA 184
           E+L R+  V+   DP AR L+L +LG   H   D   I + I + + S    E++A+IF 
Sbjct: 221 EVLKRIHSVILSNDPIARSLSLRVLGSVPHLIADKLYIHHSIRTCMQSHDQVELEATIFI 280

Query: 185 AACICQLADDFAQVFLAILVNIMTSTTSLTI-RMAGARVFAKLGCSHSMAKTAYKVMLV 240
              +C+++  F+   +  +  ++ +  +  I ++   R+F  +  SHS+A T  K MLV
Sbjct: 281 MDKLCEISPLFSDSIIEKIHTVIQNVETPPITKLKYTRLFRHMHHSHSIA-TQSKEMLV 321

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BLAST of CSPI05G01840 vs. ExPASy TrEMBL
Match: A0A0A0KJG8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G083800 PE=3 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 4.5e-127
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MERSSAACAMEWSIELEKALRLKKPGRAVEAIRQIGCRLQQWSREPEPNVAVYNMFDLVT 60
           MERSSAACAMEWSIELEKALRLKKPGRAVEAIRQIGCRLQQWSREPEPNVAVYNMFDLVT
Sbjct: 1   MERSSAACAMEWSIELEKALRLKKPGRAVEAIRQIGCRLQQWSREPEPNVAVYNMFDLVT 60

Query: 61  WEDRLFSNTILLRLADAFKFDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNH 120
           WEDRLFSNTILLRLADAFKFDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNH
Sbjct: 61  WEDRLFSNTILLRLADAFKFDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNH 120

Query: 121 HELLTRVKVVLNGGDPEARGLALILLGCWAHFAKDSAQIRYLIFSSLFSSHLSEVKASIF 180
           HELLTRVKVVLNGGDPEARGLALILLGCWAHFAKDSAQIRYLIFSSLFSSHLSEVKASIF
Sbjct: 121 HELLTRVKVVLNGGDPEARGLALILLGCWAHFAKDSAQIRYLIFSSLFSSHLSEVKASIF 180

Query: 181 AAACICQLADDFAQVFLAILVNIMTSTTSLTIRMAGARVFAKLGCSHSMAKTAYKVMLVF 240
           AAACICQLADDFAQVFLAILVNIMTSTTSLTIRMAGARVFAKLGCSHSMAKTAYKVMLVF
Sbjct: 181 AAACICQLADDFAQVFLAILVNIMTSTTSLTIRMAGARVFAKLGCSHSMAKTAYKVMLVF 240

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BLAST of CSPI05G01840 vs. ExPASy TrEMBL
Match: A0A5A7TH30 (Integrator complex subunit 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold228G00040 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 4.5e-119
Identity = 226/240 (94.17%), Postives = 232/240 (96.67%), Query Frame = 0


Query: 1   MERSSAACAMEWSIELEKALRLKKPGRAVEAIRQIGCRLQQWSREPEPNVAVYNMFDLVT 60
           MER+SAACAMEWSIELEKALR KKPGRAVEAIRQIGCRLQQWSREPEPN+AVYNMFDLVT
Sbjct: 40  MERNSAACAMEWSIELEKALRFKKPGRAVEAIRQIGCRLQQWSREPEPNIAVYNMFDLVT 99

Query: 61  WEDRLFSNTILLRLADAFKFDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNH 120
           WED+LFSNTILLRLADAFK DDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQN 
Sbjct: 100 WEDKLFSNTILLRLADAFKIDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNP 159

Query: 121 HELLTRVKVVLNGGDPEARGLALILLGCWAHFAKDSAQIRYLIFSSLFSSHLSEVKASIF 180
           HELLTRVKVVL+GGDPEA+ LALI+LGCWAHFAKDSAQIRYLIF SLFSSHLSEVKASIF
Sbjct: 160 HELLTRVKVVLHGGDPEAKALALIVLGCWAHFAKDSAQIRYLIFYSLFSSHLSEVKASIF 219

Query: 181 AAACICQLADDFAQVFLAILVNIMTSTTSLTIRMAGARVFAKLGCSHSMAKTAYKVMLVF 240
           AAACI QLADDFAQVFL ILVNIMTSTTSL IRMAGARVFAKLGCSHSMAKTAYKVMLVF
Sbjct: 220 AAACISQLADDFAQVFLVILVNIMTSTTSLAIRMAGARVFAKLGCSHSMAKTAYKVMLVF 279

[Close]

BLAST of CSPI05G01840 vs. ExPASy TrEMBL
Match: A0A1S3CMM3 (uncharacterized protein LOC103502541 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502541 PE=3 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.6e-116
Identity = 222/238 (93.28%), Postives = 228/238 (95.80%), Query Frame = 0


Query: 1   MERSSAACAMEWSIELEKALRLKKPGRAVEAIRQIGCRLQQWSREPEPNVAVYNMFDLVT 60
           MER+SAACAMEWSIELEKALR KKPGRAVEAIRQIGCRLQQWSREPEPN+AVYNMFDLVT
Sbjct: 1   MERNSAACAMEWSIELEKALRFKKPGRAVEAIRQIGCRLQQWSREPEPNIAVYNMFDLVT 60

Query: 61  WEDRLFSNTILLRLADAFKFDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNH 120
           WED+LFSNTILLRLADAFK DDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQN 
Sbjct: 61  WEDKLFSNTILLRLADAFKIDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNP 120

Query: 121 HELLTRVKVVLNGGDPEARGLALILLGCWAHFAKDSAQIRYLIFSSLFSSHLSEVKASIF 180
           HELLTRVKVVL+GGDPEA+ LALI+LGCWAHFAKDSAQIRYLIF SLFSSHLSEVKASIF
Sbjct: 121 HELLTRVKVVLHGGDPEAKALALIVLGCWAHFAKDSAQIRYLIFYSLFSSHLSEVKASIF 180

Query: 181 AAACICQLADDFAQVFLAILVNIMTSTTSLTIRMAGARVFAKLGCSHSMAKTAYKVML 239
           AAACI QLADDFAQVFL ILVNIMTSTTSL IRMAGARVFAKLGCSHSMAKTAYK  L
Sbjct: 181 AAACISQLADDFAQVFLVILVNIMTSTTSLAIRMAGARVFAKLGCSHSMAKTAYKAGL 238

[Close]

BLAST of CSPI05G01840 vs. ExPASy TrEMBL
Match: A0A6J1FP76 (uncharacterized protein LOC111447255 OS=Cucurbita moschata OX=3662 GN=LOC111447255 PE=3 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 3.8e-110
Identity = 210/238 (88.24%), Postives = 223/238 (93.70%), Query Frame = 0


Query: 1   MERSSAACAMEWSIELEKALRLKKPGRAVEAIRQIGCRLQQWSREPEPNVAVYNMFDLVT 60
           MER++AACAMEWSIELEKALR KKPGRAVEAI QIG RLQQWSREPEPN+AVYNMFDLVT
Sbjct: 13  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVT 72

Query: 61  WEDRLFSNTILLRLADAFKFDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNH 120
           WEDRLFSNTILLRLADAFK DDKHIR+AVV+VFLSEL SRD ++SKQYQG+LSKARVQNH
Sbjct: 73  WEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSRDRTKSKQYQGVLSKARVQNH 132

Query: 121 HELLTRVKVVLNGGDPEARGLALILLGCWAHFAKDSAQIRYLIFSSLFSSHLSEVKASIF 180
           HELLTRVKVVL GGDPEAR LALILLGCWAHFA+ SAQIRY+I SS+ SSH+SEVKASIF
Sbjct: 133 HELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIF 192

Query: 181 AAACICQLADDFAQVFLAILVNIMTSTTSLTIRMAGARVFAKLGCSHSMAKTAYKVML 239
           AAACI QLADDFAQVFLAILVNIMTSTTSL I+MAGARVFAKLGCSHSMAKTAYK  L
Sbjct: 193 AAACISQLADDFAQVFLAILVNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGL 250

[Close]

BLAST of CSPI05G01840 vs. ExPASy TrEMBL
Match: A0A6J1JBG3 (uncharacterized protein LOC111485260 OS=Cucurbita maxima OX=3661 GN=LOC111485260 PE=3 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 6.1e-108
Identity = 207/238 (86.97%), Postives = 221/238 (92.86%), Query Frame = 0


Query: 1   MERSSAACAMEWSIELEKALRLKKPGRAVEAIRQIGCRLQQWSREPEPNVAVYNMFDLVT 60
           MER++AA AMEWSIELEKALR KKPGRAVEAI QIG RLQQWSREPEPN+AVYNMFDLVT
Sbjct: 1   MERNAAASAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVT 60

Query: 61  WEDRLFSNTILLRLADAFKFDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNH 120
           WEDRLFSNTILLRLADAFK DDKHIR+AVVRVFLSEL SRD ++S+QYQG+LSKARVQNH
Sbjct: 61  WEDRLFSNTILLRLADAFKSDDKHIRVAVVRVFLSELNSRDRTKSQQYQGVLSKARVQNH 120

Query: 121 HELLTRVKVVLNGGDPEARGLALILLGCWAHFAKDSAQIRYLIFSSLFSSHLSEVKASIF 180
           HELLTRVKVVL GGDPEAR LALILLGCWAHFA+ SAQIRY+I  SL SSH+SEVKASIF
Sbjct: 121 HELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILRSLLSSHISEVKASIF 180

Query: 181 AAACICQLADDFAQVFLAILVNIMTSTTSLTIRMAGARVFAKLGCSHSMAKTAYKVML 239
           AAACI QLADDFA+VFLAILVNIMTSTTSL ++MAGARVFAKLGCSHSMAKTAYK  L
Sbjct: 181 AAACISQLADDFAEVFLAILVNIMTSTTSLALKMAGARVFAKLGCSHSMAKTAYKAGL 238

[Close]

BLAST of CSPI05G01840 vs. NCBI nr
Match: XP_011654519.1 (uncharacterized protein LOC101204851 isoform X2 [Cucumis sativus])

HSP 1 Score: 456.8 bits (1174), Expect = 1.1e-124
Identity = 236/239 (98.74%), Postives = 237/239 (99.16%), Query Frame = 0


Query: 1   MERSSAACAMEWSIELEKALRLKKPGRAVEAIRQIGCRLQQWSREPEPNVAVYNMFDLVT 60
           MERSSAACAMEWSIELEKALRLKKPGRAVEAIRQIGCRLQQWSREPEPNVAVYNMFDLVT
Sbjct: 1   MERSSAACAMEWSIELEKALRLKKPGRAVEAIRQIGCRLQQWSREPEPNVAVYNMFDLVT 60

Query: 61  WEDRLFSNTILLRLADAFKFDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNH 120
           WEDRLFSNTILLRLADAFKFDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNH
Sbjct: 61  WEDRLFSNTILLRLADAFKFDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNH 120

Query: 121 HELLTRVKVVLNGGDPEARGLALILLGCWAHFAKDSAQIRYLIFSSLFSSHLSEVKASIF 180
           HELLTRVKVVLNGGDPEARGLALILLGCWAHFAKDSAQIRYLIFSSLFSSHLSEVKASIF
Sbjct: 121 HELLTRVKVVLNGGDPEARGLALILLGCWAHFAKDSAQIRYLIFSSLFSSHLSEVKASIF 180

Query: 181 AAACICQLADDFAQVFLAILVNIMTSTTSLTIRMAGARVFAKLGCSHSMAKTAYKVMLV 240
           AAACICQLADDFAQVFLAILVNIMTSTTSLTIRMAGARVFAKLGCSHSMAKTAYKV  +
Sbjct: 181 AAACICQLADDFAQVFLAILVNIMTSTTSLTIRMAGARVFAKLGCSHSMAKTAYKVQFL 239

[Close]

BLAST of CSPI05G01840 vs. NCBI nr
Match: XP_011654518.1 (uncharacterized protein LOC101204851 isoform X1 [Cucumis sativus] >KGN50927.2 hypothetical protein Csa_018429 [Cucumis sativus])

HSP 1 Score: 455.3 bits (1170), Expect = 3.3e-124
Identity = 236/238 (99.16%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 1   MERSSAACAMEWSIELEKALRLKKPGRAVEAIRQIGCRLQQWSREPEPNVAVYNMFDLVT 60
           MERSSAACAMEWSIELEKALRLKKPGRAVEAIRQIGCRLQQWSREPEPNVAVYNMFDLVT
Sbjct: 1   MERSSAACAMEWSIELEKALRLKKPGRAVEAIRQIGCRLQQWSREPEPNVAVYNMFDLVT 60

Query: 61  WEDRLFSNTILLRLADAFKFDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNH 120
           WEDRLFSNTILLRLADAFKFDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNH
Sbjct: 61  WEDRLFSNTILLRLADAFKFDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNH 120

Query: 121 HELLTRVKVVLNGGDPEARGLALILLGCWAHFAKDSAQIRYLIFSSLFSSHLSEVKASIF 180
           HELLTRVKVVLNGGDPEARGLALILLGCWAHFAKDSAQIRYLIFSSLFSSHLSEVKASIF
Sbjct: 121 HELLTRVKVVLNGGDPEARGLALILLGCWAHFAKDSAQIRYLIFSSLFSSHLSEVKASIF 180

Query: 181 AAACICQLADDFAQVFLAILVNIMTSTTSLTIRMAGARVFAKLGCSHSMAKTAYKVML 239
           AAACICQLADDFAQVFLAILVNIMTSTTSLTIRMAGARVFAKLGCSHSMAKTAYK  L
Sbjct: 181 AAACICQLADDFAQVFLAILVNIMTSTTSLTIRMAGARVFAKLGCSHSMAKTAYKAGL 238

[Close]

BLAST of CSPI05G01840 vs. NCBI nr
Match: KAA0040971.1 (integrator complex subunit 7 [Cucumis melo var. makuwa] >TYK20322.1 integrator complex subunit 7 [Cucumis melo var. makuwa])

HSP 1 Score: 437.2 bits (1123), Expect = 9.3e-119
Identity = 226/240 (94.17%), Postives = 232/240 (96.67%), Query Frame = 0


Query: 1   MERSSAACAMEWSIELEKALRLKKPGRAVEAIRQIGCRLQQWSREPEPNVAVYNMFDLVT 60
           MER+SAACAMEWSIELEKALR KKPGRAVEAIRQIGCRLQQWSREPEPN+AVYNMFDLVT
Sbjct: 40  MERNSAACAMEWSIELEKALRFKKPGRAVEAIRQIGCRLQQWSREPEPNIAVYNMFDLVT 99

Query: 61  WEDRLFSNTILLRLADAFKFDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNH 120
           WED+LFSNTILLRLADAFK DDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQN 
Sbjct: 100 WEDKLFSNTILLRLADAFKIDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNP 159

Query: 121 HELLTRVKVVLNGGDPEARGLALILLGCWAHFAKDSAQIRYLIFSSLFSSHLSEVKASIF 180
           HELLTRVKVVL+GGDPEA+ LALI+LGCWAHFAKDSAQIRYLIF SLFSSHLSEVKASIF
Sbjct: 160 HELLTRVKVVLHGGDPEAKALALIVLGCWAHFAKDSAQIRYLIFYSLFSSHLSEVKASIF 219

Query: 181 AAACICQLADDFAQVFLAILVNIMTSTTSLTIRMAGARVFAKLGCSHSMAKTAYKVMLVF 240
           AAACI QLADDFAQVFL ILVNIMTSTTSL IRMAGARVFAKLGCSHSMAKTAYKVMLVF
Sbjct: 220 AAACISQLADDFAQVFLVILVNIMTSTTSLAIRMAGARVFAKLGCSHSMAKTAYKVMLVF 279

[Close]

BLAST of CSPI05G01840 vs. NCBI nr
Match: XP_008464722.1 (PREDICTED: uncharacterized protein LOC103502541 isoform X1 [Cucumis melo])

HSP 1 Score: 428.7 bits (1101), Expect = 3.3e-116
Identity = 222/238 (93.28%), Postives = 228/238 (95.80%), Query Frame = 0


Query: 1   MERSSAACAMEWSIELEKALRLKKPGRAVEAIRQIGCRLQQWSREPEPNVAVYNMFDLVT 60
           MER+SAACAMEWSIELEKALR KKPGRAVEAIRQIGCRLQQWSREPEPN+AVYNMFDLVT
Sbjct: 1   MERNSAACAMEWSIELEKALRFKKPGRAVEAIRQIGCRLQQWSREPEPNIAVYNMFDLVT 60

Query: 61  WEDRLFSNTILLRLADAFKFDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNH 120
           WED+LFSNTILLRLADAFK DDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQN 
Sbjct: 61  WEDKLFSNTILLRLADAFKIDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNP 120

Query: 121 HELLTRVKVVLNGGDPEARGLALILLGCWAHFAKDSAQIRYLIFSSLFSSHLSEVKASIF 180
           HELLTRVKVVL+GGDPEA+ LALI+LGCWAHFAKDSAQIRYLIF SLFSSHLSEVKASIF
Sbjct: 121 HELLTRVKVVLHGGDPEAKALALIVLGCWAHFAKDSAQIRYLIFYSLFSSHLSEVKASIF 180

Query: 181 AAACICQLADDFAQVFLAILVNIMTSTTSLTIRMAGARVFAKLGCSHSMAKTAYKVML 239
           AAACI QLADDFAQVFL ILVNIMTSTTSL IRMAGARVFAKLGCSHSMAKTAYK  L
Sbjct: 181 AAACISQLADDFAQVFLVILVNIMTSTTSLAIRMAGARVFAKLGCSHSMAKTAYKAGL 238

[Close]

BLAST of CSPI05G01840 vs. NCBI nr
Match: XP_038892419.1 (uncharacterized protein LOC120081531 isoform X1 [Benincasa hispida])

HSP 1 Score: 422.2 bits (1084), Expect = 3.1e-114
Identity = 218/238 (91.60%), Postives = 228/238 (95.80%), Query Frame = 0


Query: 1   MERSSAACAMEWSIELEKALRLKKPGRAVEAIRQIGCRLQQWSREPEPNVAVYNMFDLVT 60
           MER+SAACAMEWSIELEKALR KKPG+AVEAI QIG RLQQWSREPEPNVAVYNMFDLVT
Sbjct: 1   MERNSAACAMEWSIELEKALRSKKPGQAVEAILQIGSRLQQWSREPEPNVAVYNMFDLVT 60

Query: 61  WEDRLFSNTILLRLADAFKFDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNH 120
           WEDRLFSNTILLRLADAFKFDDK+IRLAVVRVFLSELYSRDS+RSKQYQGILSKAR+QNH
Sbjct: 61  WEDRLFSNTILLRLADAFKFDDKYIRLAVVRVFLSELYSRDSARSKQYQGILSKARIQNH 120

Query: 121 HELLTRVKVVLNGGDPEARGLALILLGCWAHFAKDSAQIRYLIFSSLFSSHLSEVKASIF 180
           HELL+RVKVVLNGGDPEAR LALILLGCWAHFAKDSAQIRYLIFSS++SSHLSEVKASIF
Sbjct: 121 HELLSRVKVVLNGGDPEARALALILLGCWAHFAKDSAQIRYLIFSSMYSSHLSEVKASIF 180

Query: 181 AAACICQLADDFAQVFLAILVNIMTSTTSLTIRMAGARVFAKLGCSHSMAKTAYKVML 239
           AAACI QLADDFAQVFL ILVNIMTSTTS+ IRMAGARVFAKLGCSHS+AK AYK  L
Sbjct: 181 AAACISQLADDFAQVFLVILVNIMTSTTSMAIRMAGARVFAKLGCSHSIAKMAYKAGL 238

[Close]

BLAST of CSPI05G01840 vs. TAIR 10
Match: AT4G20060.1 (ARM repeat superfamily protein )

HSP 1 Score: 243.0 bits (619), Expect = 2.4e-64
Identity = 135/241 (56.02%), Postives = 173/241 (71.78%), Query Frame = 0


Query: 1   MERSSAACAMEWSIELEKALRLKKPGRAVEAIRQIGCRLQQWSREPEPNVAVYNMFDLVT 60
           ME+ SAACAMEWSI+LEK+LR K   +AVEAI + G +L+QWS+EPE  +AVYN+F LV 
Sbjct: 1   MEKVSAACAMEWSIKLEKSLRSKNSVKAVEAILETGGKLEQWSKEPESAIAVYNLFGLVP 60

Query: 61  WEDRLFSNTILLRLADAFKFDDKHIRLAVVRVFLSEL-YSRDSSRSKQYQGILSKARVQN 120
            ED+LFSNTILLRL DAF   DK I+LAVVRVF+S    SR  + ++     LSK RV N
Sbjct: 61  EEDKLFSNTILLRLVDAFCVGDKLIKLAVVRVFMSMFKLSRGKNVNESASWFLSKGRVHN 120

Query: 121 HHELLTRVKVVLNGGDPEARGLALILLGCWAHFAKDSAQIRYLIFSSLFSSHLSEVKASI 180
           H ELLTRVK V + GD E++ LALIL GCW  FA + A +RYL+FSS+ S H  E ++++
Sbjct: 121 HLELLTRVKNVYDKGDTESKALALILFGCWRDFASEFAPVRYLVFSSMVSPHDLEGRSAL 180

Query: 181 FAAACICQLADDFAQVFLAILVNIMTSTTSLT--IRMAGARVFAKLGCSHSMAKTAYKVM 239
           FAAAC C++ADDFA V L +L N M     +T   R+A  RVFAK+GCSH++A  A+K+ 
Sbjct: 181 FAAACFCEVADDFALVVLGML-NDMVKFPDITPKTRLAAVRVFAKMGCSHTIANRAFKIC 240

The following BLAST results are available for this feature:

BLAST of CSPI05G01840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54PL2	8.4e-06	26.26	Integrator complex subunit 7 homolog OS=Dictyostelium discoideum OX=44689 GN=int...	[more]

BLAST of CSPI05G01840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJG8	4.5e-127	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G083800 PE=3 SV=1	[more]
A0A5A7TH30	4.5e-119	94.17	Integrator complex subunit 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CMM3	1.6e-116	93.28	uncharacterized protein LOC103502541 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1FP76	3.8e-110	88.24	uncharacterized protein LOC111447255 OS=Cucurbita moschata OX=3662 GN=LOC1114472...	[more]
A0A6J1JBG3	6.1e-108	86.97	uncharacterized protein LOC111485260 OS=Cucurbita maxima OX=3661 GN=LOC111485260...	[more]

BLAST of CSPI05G01840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654519.1	1.1e-124	98.74	uncharacterized protein LOC101204851 isoform X2 [Cucumis sativus]	[more]
XP_011654518.1	3.3e-124	99.16	uncharacterized protein LOC101204851 isoform X1 [Cucumis sativus] >KGN50927.2 hy...	[more]
KAA0040971.1	9.3e-119	94.17	integrator complex subunit 7 [Cucumis melo var. makuwa] >TYK20322.1 integrator c...	[more]
XP_008464722.1	3.3e-116	93.28	PREDICTED: uncharacterized protein LOC103502541 isoform X1 [Cucumis melo]	[more]
XP_038892419.1	3.1e-114	91.60	uncharacterized protein LOC120081531 isoform X1 [Benincasa hispida]	[more]

BLAST of CSPI05G01840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20060.1	2.4e-64	56.02	ARM repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033060	Integrator complex subunit 7	PANTHER	PTHR13322	C1ORF73 PROTEIN	coord: 1..236
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 69..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G01840.1	CSPI05G01840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016180	snRNA processing
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0032039	integrator complex