CSPI04G11000 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCATAAAGGAAAAACTAAAAGCCAAACGGAGCCACAAAATTTGGCGGGAAACCCGAAATCATGAGCTCGTCGGCAGTGGACACGGAGGCGCCCGATCTACTTTGCCACTTTGACAACGTCCAGGGTCTGGTGGATGCTTTCACCTCCGTTCGATGGAAACGCCATCAGGTCATTCCCATTTTCCTTAGCTCGACACATTCTTTTTCTGGATTAATCTTCTTATTCGTTTGTTTAGGATATTAATTTCATTGTTTCTCACTTAGGACGCCGTAATCGAACTATCGGAACATGGCATCGTTTTGATCGTTGAGGAATCCGGCTGTCTTCAGGCCAAAGTGTATCTGCAGCGTGAGGTTTTGGATTTTCAGTTTAACATTTAGTCTCTTAGTAATAGATTGATTATAAGCTGTTAATCCAATACTTTAGTTAGGAAAAGAAATCTTGTGTTTGTGAAGTTGCAAATGAAGGATAATTATGATTCAATTAGTACTATTTCTTGTTTAACTCAATTGAAACGCACATGCCACAGAAGGAAATTCGATCTAATGCTTTTCTACATGCCACAGCTTTTCATTCGCTATGAATACAGTGCACAAGCTCGGCCCAGATTTGGAGTGAGCTTAGGGATTTTTGTTGATAGTTTGAATACATTTTCTGTTCCTGGACGTTTAAGCACCATTGAACTCAAATACCCAGGACCTGACATGCAACTTCTTCTCAAGTATATTCACTTTGCTTCTCTGTGCATCATTTTCCATCTCTGTTATCTAACTCTATGTTTGTTCGCTTATTATATTGACAGAGAAAACCAAGCGATAAAGCTTTTAACTATTCTTATGTTTAGTTAATTTGATTGGTAAGACTTGAATTTGTTTCTGGTTTTTAGGCTCCGTTTGGTATTTGATTTTAGAGGCGTTAATAGTGACAAATTGATTGTGGGGAAATTTAATCGATTTTAGTATTTGGCTAAACAAATTGCTTTGAATTGTCAAGTCTAGTTAACGTAGTTTTAGAGATTGGCTTCCTAAAAAAATTGATGTCTCTCTAACCAACATTTTGTAAATAAAGCAATCTCAAAGTAATCCTTAGACTTGCTATGACTCTATGAGTGTGAGCAATATGACTGATCATCTTATATTTGCCAGCTATGTCCCTAATAGCTTTTTTTCTCTTTTTTATAAAACCACGTCTCTGAATTCTTTAGGGGGTACTAACAGAGGTTTATGGATCAAGTCATATGGTATTAGTAAGGGCATAGCCGCATAAGGGTAATTAACTAGAGAGTTGGTGTTTTTTGTTATAAATAGAGGGAGGGGTGGAGGGAAGGGTGGAGGGAAGGTTCCAAGTGCCTAATACTTGGTTTATCATGTAGTTCTTAATCTTCTATATTACAATATACTTCAGATCTTGATTCCTGTTAGGTGGTACCGTAACAAGAAAGTGTTGGTATCTTCATAAAACTTCGGAATTGAGAAACAAATATAGGTGGACTAATTAGAAATTCTATTTCGTTTATTTTCCTATGATGGAACAATTTCTATGCAGATCTAGGAGAGAAAAGGCACTTCAAACATAAGTAACTTACTCCAAGTTTATTATCAGGACGGTTGATTCATTAGATGCTTGCATTTATGCGGAGATCAGAACCAGAATCCCAGATACGATTTCATGGGATTACAATTTTGAACCTGCTGGAAGCAGCCCACTCAGTTTCACCGTCAAGGTATAAGTTCATATTGTAATTAACTACGAAATCTTGTTATACATGCCAAGGATGACACCTGATATAGATCCTAGAAGACATAAATCTGAAGGCAAGAGAACACTAGGGAGAAATAAGTTATGAATCTAAATATTATATTACAGATCATCAAATAAAAATAACTGGAGCTTGTTGTTTAAATACCAGTCTGCAGCACTGAAGGAAGCTATTGATGATCTTGAATGGCCTGGATCAAGTGTCCTTATAGCTCTACAACCGTCTCCCCCTTCTGTCACCTTCAAAGCTGAAGGCCATGGAGACTTGCAGGTATGGTTTTTCATAAACAAAATTGAAACGTGAAATTTTTGTTACGTGGGCAAAAATGAGTCTAGCTCAACTTCAAACATGTATTATTAACCTCGAGGTTAGTGGTTCAATCCTCCCACCATACATACTGTAGAAAAAAATATTTTATATATATTAAAGTTTAGGTTAAAAAGATTAAAAAACACTTTTTGTTCCTTTCATAAAAGTAACAATTTAGTTCTCCACTTTCGAATTTGTAACAACTTCTTGAACTTAGTTTCTTGCTTCACACCTAACTTCTGATTGAGGGTTTTCTAGTAACTGAAACGTTTTTTACATTCAAACTCAACCCTGGTGTGGATGCAAACCTCGTTTCATCCTTTGAATCTTGTTAATTATATCTTGAAAAATATTATTAAGATTTAATGAAGTTTCTTGCATATATTGATTGATAAACTAATCGGAAAACAAATCTATTTATCAATTATAAATACCAAGTTAGGTATTGAAGCTTGATAGTTAATTTTGATTTAGGAACCAAATTGTTAAAAATTTTGAAGCATAATAACTAAGTAGTTATTATTACTTATTAAAGTATAATGACTTGTTACAAACTTTGAAGTACAAGGCTAAATCATTACCAATAAAAATTCAAGGGACTAAATTGTTTCTTCTAAGTTTACAAACTAAAAGTATATATTTGAACTTATATATTGATACAACCTAATCCTTCGTTTGCAGGTGGATTTCATGTATTATGCAAATACTGATCTTCTGATCTCATTCCATTGCGATCAACAAGTATCCTACAGGTAAACACGGTTCCATCACAAAGTTAAACATAATCAAATCCTAGCACATACTTCACTGTGCCGCAAAATTCTGTTTTTGTTTGATCTTCAATGAATTAGGTACAAATACAAGTTTCTCCGTGCGACGACTTCGAACATACCAAGCAGTGTGATAAGAGAAAATAGAGGAAGCAAACTGACTATTGGGAGAGGAGGATTGCTAAAAGTTCAACACCTTGTTTCTGTCGGAAAACCATCAACTTCACACACACATATAGATTCTGCTGGCTATCAGCAACCCAGTAGAATTGCTTTCATTGAGTTCTTTGTAAAACCCGAAGAAGATTCCCCAAATGATTAGTAAACTTTTTTCAAATATTATTATTTTTCACTAAACACTCATCTTTAGGGTCAAGAC ATTCATAAAGGAAAAACTAAAAGCCAAACGGAGCCACAAAATTTGGCGGGAAACCCGAAATCATGAGCTCGTCGGCAGTGGACACGGAGGCGCCCGATCTACTTTGCCACTTTGACAACGTCCAGGGTCTGGTGGATGCTTTCACCTCCGTTCGATGGAAACGCCATCAGGACGCCGTAATCGAACTATCGGAACATGGCATCGTTTTGATCGTTGAGGAATCCGGCTGTCTTCAGGCCAAAGTGTATCTGCAGCGTGAGGTTTTGGATTTTCAGTTTAACATTTAGTCTCTTAGTAATAGATTGATTATAAGCTGTTAATCCAATACTTTAGTTAGGAAAAGAAATCTTGTGTTTGTGAAGTTGCAAATGAAGGATAATTATGATTCAATTAGTACTATTTCTTGTTTAACTCAATTGAAACGCACATGCCACAGAAGGAAATTCGATCTAATGCTTTTCTACATGCCACAGCTTTTCATTCGCTATGAATACAGTGCACAAGCTCGGCCCAGATTTGGAGTGAGCTTAGGGATTTTTGTTGATAGTTTGAATACATTTTCTGTTCCTGGACGTTTAAGCACCATTGAACTCAAATACCCAGGACCTGACATGCAACTTCTTCTCAAGACGGTTGATTCATTAGATGCTTGCATTTATGCGGAGATCAGAACCAGAATCCCAGATACGATTTCATGGGATTACAATTTTGAACCTGCTGGAAGCAGCCCACTCAGTTTCACCGTCAAGTCTGCAGCACTGAAGGAAGCTATTGATGATCTTGAATGGCCTGGATCAAGTGTCCTTATAGCTCTACAACCGTCTCCCCCTTCTGTCACCTTCAAAGCTGAAGGCCATGGAGACTTGCAGGTGGATTTCATGTATTATGCAAATACTGATCTTCTGATCTCATTCCATTGCGATCAACAAGTATCCTACAGGTACAAATACAAGTTTCTCCGTGCGACGACTTCGAACATACCAAGCAGTGTGATAAGAGAAAATAGAGGAAGCAAACTGACTATTGGGAGAGGAGGATTGCTAAAAGTTCAACACCTTGTTTCTGTCGGAAAACCATCAACTTCACACACACATATAGATTCTGCTGGCTATCAGCAACCCAGTAGAATTGCTTTCATTGAGTTCTTTGTAAAACCCGAAGAAGATTCCCCAAATGATTAGTAAACTTTTTTCAAATATTATTATTTTTCACTAAACACTCATCTTTAGGGTCAAGAC ATGAAGGATAATTATGATTCAATTAGTACTATTTCTTGTTTAACTCAATTGAAACGCACATGCCACAGAAGGAAATTCGATCTAATGCTTTTCTACATGCCACAGCTTTTCATTCGCTATGAATACAGTGCACAAGCTCGGCCCAGATTTGGAGTGAGCTTAGGGATTTTTGTTGATAGTTTGAATACATTTTCTGTTCCTGGACGTTTAAGCACCATTGAACTCAAATACCCAGGACCTGACATGCAACTTCTTCTCAAGACGGTTGATTCATTAGATGCTTGCATTTATGCGGAGATCAGAACCAGAATCCCAGATACGATTTCATGGGATTACAATTTTGAACCTGCTGGAAGCAGCCCACTCAGTTTCACCGTCAAGTCTGCAGCACTGAAGGAAGCTATTGATGATCTTGAATGGCCTGGATCAAGTGTCCTTATAGCTCTACAACCGTCTCCCCCTTCTGTCACCTTCAAAGCTGAAGGCCATGGAGACTTGCAGGTGGATTTCATGTATTATGCAAATACTGATCTTCTGATCTCATTCCATTGCGATCAACAAGTATCCTACAGGTACAAATACAAGTTTCTCCGTGCGACGACTTCGAACATACCAAGCAGTGTGATAAGAGAAAATAGAGGAAGCAAACTGACTATTGGGAGAGGAGGATTGCTAAAAGTTCAACACCTTGTTTCTGTCGGAAAACCATCAACTTCACACACACATATAGATTCTGCTGGCTATCAGCAACCCAGTAGAATTGCTTTCATTGAGTTCTTTGTAAAACCCGAAGAAGATTCCCCAAATGATTAG MKDNYDSISTISCLTQLKRTCHRRKFDLMLFYMPQLFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKTVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDQQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVGKPSTSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPND* Homology
BLAST of CSPI04G11000 vs. ExPASy Swiss-Prot
Match: O60671 (Cell cycle checkpoint protein RAD1 OS=Homo sapiens OX=9606 GN=RAD1 PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.1e-15 Identity = 68/293 (23.21%), Postives = 140/293 (47.78%), Query Frame = 0
BLAST of CSPI04G11000 vs. ExPASy Swiss-Prot
Match: Q5R7X9 (Cell cycle checkpoint protein RAD1 OS=Pongo abelii OX=9601 GN=RAD1 PE=2 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.1e-15 Identity = 68/293 (23.21%), Postives = 140/293 (47.78%), Query Frame = 0
BLAST of CSPI04G11000 vs. ExPASy TrEMBL
Match: A0A0A0L199 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G188390 PE=3 SV=1) HSP 1 Score: 610.9 bits (1574), Expect = 2.8e-171 Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0
BLAST of CSPI04G11000 vs. ExPASy TrEMBL
Match: A0A5D3DUR6 (Syntaxin-22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold95G00620 PE=3 SV=1) HSP 1 Score: 600.5 bits (1547), Expect = 3.8e-168 Identity = 295/301 (98.01%), Postives = 299/301 (99.34%), Query Frame = 0
BLAST of CSPI04G11000 vs. ExPASy TrEMBL
Match: A0A1S3B4R8 (uncharacterized protein LOC103486009 OS=Cucumis melo OX=3656 GN=LOC103486009 PE=3 SV=1) HSP 1 Score: 600.5 bits (1547), Expect = 3.8e-168 Identity = 295/301 (98.01%), Postives = 299/301 (99.34%), Query Frame = 0
BLAST of CSPI04G11000 vs. ExPASy TrEMBL
Match: A0A6J1K1L0 (uncharacterized protein LOC111491589 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491589 PE=3 SV=1) HSP 1 Score: 567.0 bits (1460), Expect = 4.7e-158 Identity = 276/301 (91.69%), Postives = 290/301 (96.35%), Query Frame = 0
BLAST of CSPI04G11000 vs. ExPASy TrEMBL
Match: A0A6J1GZY3 (uncharacterized protein LOC111459157 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459157 PE=3 SV=1) HSP 1 Score: 566.2 bits (1458), Expect = 8.0e-158 Identity = 274/301 (91.03%), Postives = 290/301 (96.35%), Query Frame = 0
BLAST of CSPI04G11000 vs. NCBI nr
Match: XP_004149108.1 (uncharacterized protein LOC101219270 [Cucumis sativus] >KGN53911.1 hypothetical protein Csa_019173 [Cucumis sativus]) HSP 1 Score: 610.9 bits (1574), Expect = 5.9e-171 Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0
BLAST of CSPI04G11000 vs. NCBI nr
Match: XP_008442021.1 (PREDICTED: uncharacterized protein LOC103486009 [Cucumis melo] >KAA0041777.1 Syntaxin-22 -like protein [Cucumis melo var. makuwa] >TYK27065.1 Syntaxin-22 -like protein [Cucumis melo var. makuwa]) HSP 1 Score: 600.5 bits (1547), Expect = 7.9e-168 Identity = 295/301 (98.01%), Postives = 299/301 (99.34%), Query Frame = 0
BLAST of CSPI04G11000 vs. NCBI nr
Match: XP_038882945.1 (uncharacterized protein LOC120074039 isoform X1 [Benincasa hispida]) HSP 1 Score: 580.1 bits (1494), Expect = 1.1e-161 Identity = 285/301 (94.68%), Postives = 293/301 (97.34%), Query Frame = 0
BLAST of CSPI04G11000 vs. NCBI nr
Match: XP_023534468.1 (uncharacterized protein LOC111796019 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 568.2 bits (1463), Expect = 4.4e-158 Identity = 275/301 (91.36%), Postives = 290/301 (96.35%), Query Frame = 0
BLAST of CSPI04G11000 vs. NCBI nr
Match: XP_022996322.1 (uncharacterized protein LOC111491589 isoform X1 [Cucurbita maxima]) HSP 1 Score: 567.0 bits (1460), Expect = 9.7e-158 Identity = 276/301 (91.69%), Postives = 290/301 (96.35%), Query Frame = 0
BLAST of CSPI04G11000 vs. TAIR 10
Match: AT4G17760.1 (damaged DNA binding;exodeoxyribonuclease IIIs ) HSP 1 Score: 477.6 bits (1228), Expect = 7.2e-135 Identity = 223/295 (75.59%), Postives = 260/295 (88.14%), Query Frame = 0
BLAST of CSPI04G11000 vs. TAIR 10
Match: AT4G17760.2 (damaged DNA binding;exodeoxyribonuclease IIIs ) HSP 1 Score: 397.1 bits (1019), Expect = 1.2e-110 Identity = 186/244 (76.23%), Postives = 216/244 (88.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|