CSPI04G05770 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAATTCGAATTAATTGAATTACATAGTACTAATGATATATGTTTTTAAAATGATTTATTTAATTAGAATTGGTTTCCGTCTTGTTGCTTCTATCTCGCTAACGAACCTTCTCTTCACTTTCATACTGCAAAATCCCCTGTTTCGAATTTGCCTAAGAATTTCATGATCTCTTCTTTGTATGTTGAATTACGATTCTTCTTTCTATGAAACCCATCGGCGATTCTCTCTTTCCGAGTAACGATAGCGATGAGACGACGTACGGATACTGATGATTTCAGGCCTGTTAACAATAATACTTTTCAAACAATTACTGCCGCCGCTGATGCGATCGCAACCGTCGATCATCGTTTCCCTCGGGCTACTGCCGTCCAGGTATTATTATTGTATTCTATTGTTCGGATCAATTCACCTTCTATTCAAATCATTCATTTGGTATTTTTAGAATTTAGTGTTGGTTACTTATGGATTGATAATATTGACCTTGTTTTTGGAAATTACTATTCCTTCTTAATTCCGTTAGGTATTAGGATGTACTGTAGTTGTTTTTCGATGGATGAGATGATATTATAGCGGAATGGAATCTGTGTTGTTTTTGTTTTGGATTGTGAAATTCTATTTAAGGCTTTTAATTTCCCATTTTATTGCTTGTTCCTTCTGTTTGTTTGCTTAGAAACTGTGAATCGTCACATGGAAACATGAAAAAAAGGGGAATCACGAGCTGAGTTGGGTTCTGCTTTTTTCTGCTTTTTCTGCTTTTGGCTTTCTTCTTCCCTTATGATTATTAGATTTTTAAGGATTGGGAAGTACCAAGATTAGTGTTATTGGGTTTGGATCACTGTGTCAGGAAGCAATGTGCTGCTGTAGCCCCAATGTTATTTGTCTTTTTGTAATAACACTAGGCACTTTTTAACCAGAAAAAAGCATCTCTTTCTCTCCATTCTCTTTATCTTTTCAAAAAAGAGAGAGAGAGAGGTGTTGTTTTTTAAATGCATTCTATATAGAGGAAGAGTATTGCTTTTTTTATAAAGATTCCAACAAATGAGGCTCTCATTTGCCCAAGCACTTCCCCACTGTTTTGTACTGATGTCATTATCAGTTTCCTCTTTTTCTCTTTGTTTGATTACTAGCAGAAAAGAAGATGGGGCAGTTGTTTGAGTATTTATTGGTGCTTTGGATCTATCAAACAGAGGAAAAGAATCGGGCATGCTGTATTGGTACCAGAACCAAGTCCTTCATCTGAGCCTCATGAAAATACATTACAATCACCAGATATTGTGCTTCCTTTTGCTGCACCTCCTTCTTCCCCTGTTTCCTTACTTCAATCTGAACCACCTTCTGCTATGCAGTCGCCTACTGCTTTAATCTCTTTCACTTCTCTTACTGCTAACATGTATTCTCCTGATGGGCCTTCCTCCATTTTTGCCATTGGCCCATTTGCTCATGAACCACAATTAGTGTCTCCACCTCTGAATTTCTCTACTCTTACTACTGAACCATCAACTCCCTTCACTCCTCCCGAATCTATCCACTTGACTACACCTTCTTCCCCTGAAGTTCCTTTTGCTCAGTTTGTTCAGCCTACTCTTCCGAAAGTTGAGTCTGATAATCAATATACATTTCCTAATGATGATTTCCAATCTTACCAATTCTATCCAGGTAGTCCGGTTAGTCACCTCATATCACCACGGTCGGTTATTTCTCGTTCTGGGGCTTCATCGCCTTTGCCTGACTATGATTTTGCTTCCTTTGGTTCTCAATTTTTGAATTTCCCACTAGAAGTTCCACCTACTTTGTTGAACCTTGACAAACATTCCATTCATAACTGGCGACAACGTCAAAGTACTGATTCTTGTACTCAAGATTCTATAGAATTCAAATCAAGTAATGACTTTGTTTTGAATCCCCAAACTTCAGAATCTATGTCTGATCACCACGCAACAAATGAATCTCAAAATATTCAAATTCTCATCGATGATGGAAGTAAAAAGGAGGAGGAGCCAGGTGCTACTAATCATAGATTCTCATTTGAGCTATCTGATGGGGATGTTTTATTACAAAGCGTAGGAAGTAAGCCATTGGAATCAAATGAACTTGCGGTTGAATCATCGCCAATACATGAACCATTTGAAACGACTAAAGAAAATTCTCCTCATGGTGACCATACTTCAAATGTTATAGAAGAAAAGACAAAAGCAGACGGTGATGAAGCACATCAGCGTCAAGAACATCATTCCGTTACACTTGGGTCTGTGAAGGAATTCAATTTTGATAATGGTAATGGAAGTGACACACATAACCCAAATATAAAATCAGAATGGTGGATTAATGCAAAGGATGGTAGCACAGAAAGCACAGCCACCGGGACCTGGTCATTCTTTCCAATGACGCAACAAAGATGAGCAAACTGGGGCAGTTGCAAATCGATAGGTAAGACGAACAGCAAGAGGAATTGTTAGTTTTGAAGGTTTTAAAAAACATGTCAAATTATGAAAGAGCCTGACCAGAAGCCTTTTTTTCCAACAATATGACCTAAAACAAACAACGACAGATATTATTAGATAGAACGATAGAGAAATTGTAGATTCAATAGGACCTTATTAACAAACACTTGTGGCTTGTGACTCGTCACTTGGATTGTAATAGATATCAAAGTCTTGATAGAAATTGAAAGCATGTAAATATGGTAATAAGAAGC GAAAATTCGAATTAATTGAATTACATAGTACTAATGATATATGTTTTTAAAATGATTTATTTAATTAGAATTGGTTTCCGTCTTGTTGCTTCTATCTCGCTAACGAACCTTCTCTTCACTTTCATACTGCAAAATCCCCTGTTTCGAATTTGCCTAAGAATTTCATGATCTCTTCTTTGTATGTTGAATTACGATTCTTCTTTCTATGAAACCCATCGGCGATTCTCTCTTTCCGAGTAACGATAGCGATGAGACGACGTACGGATACTGATGATTTCAGGCCTGTTAACAATAATACTTTTCAAACAATTACTGCCGCCGCTGATGCGATCGCAACCGTCGATCATCGTTTCCCTCGGGCTACTGCCGTCCAGAAAAGAAGATGGGGCAGTTGTTTGAGTATTTATTGGTGCTTTGGATCTATCAAACAGAGGAAAAGAATCGGGCATGCTGTATTGGTACCAGAACCAAGTCCTTCATCTGAGCCTCATGAAAATACATTACAATCACCAGATATTGTGCTTCCTTTTGCTGCACCTCCTTCTTCCCCTGTTTCCTTACTTCAATCTGAACCACCTTCTGCTATGCAGTCGCCTACTGCTTTAATCTCTTTCACTTCTCTTACTGCTAACATGTATTCTCCTGATGGGCCTTCCTCCATTTTTGCCATTGGCCCATTTGCTCATGAACCACAATTAGTGTCTCCACCTCTGAATTTCTCTACTCTTACTACTGAACCATCAACTCCCTTCACTCCTCCCGAATCTATCCACTTGACTACACCTTCTTCCCCTGAAGTTCCTTTTGCTCAGTTTGTTCAGCCTACTCTTCCGAAAGTTGAGTCTGATAATCAATATACATTTCCTAATGATGATTTCCAATCTTACCAATTCTATCCAGGTAGTCCGGTTAGTCACCTCATATCACCACGGTCGGTTATTTCTCGTTCTGGGGCTTCATCGCCTTTGCCTGACTATGATTTTGCTTCCTTTGGTTCTCAATTTTTGAATTTCCCACTAGAAGTTCCACCTACTTTGTTGAACCTTGACAAACATTCCATTCATAACTGGCGACAACGTCAAAGTACTGATTCTTGTACTCAAGATTCTATAGAATTCAAATCAAGTAATGACTTTGTTTTGAATCCCCAAACTTCAGAATCTATGTCTGATCACCACGCAACAAATGAATCTCAAAATATTCAAATTCTCATCGATGATGGAAGTAAAAAGGAGGAGGAGCCAGGTGCTACTAATCATAGATTCTCATTTGAGCTATCTGATGGGGATGTTTTATTACAAAGCGTAGGAAGTAAGCCATTGGAATCAAATGAACTTGCGGTTGAATCATCGCCAATACATGAACCATTTGAAACGACTAAAGAAAATTCTCCTCATGGTGACCATACTTCAAATGTTATAGAAGAAAAGACAAAAGCAGACGGTGATGAAGCACATCAGCGTCAAGAACATCATTCCGTTACACTTGGGTCTGTGAAGGAATTCAATTTTGATAATGGTAATGGAAGTGACACACATAACCCAAATATAAAATCAGAATGGTGGATTAATGCAAAGGATGGTAGCACAGAAAGCACAGCCACCGGGACCTGGTCATTCTTTCCAATGACGCAACAAAGATGAGCAAACTGGGGCAGTTGCAAATCGATAGGTAAGACGAACAGCAAGAGGAATTGTTAGTTTTGAAGGTTTTAAAAAACATGTCAAATTATGAAAGAGCCTGACCAGAAGCCTTTTTTTCCAACAATATGACCTAAAACAAACAACGACAGATATTATTAGATAGAACGATAGAGAAATTGTAGATTCAATAGGACCTTATTAACAAACACTTGTGGCTTGTGACTCGTCACTTGGATTGTAATAGATATCAAAGTCTTGATAGAAATTGAAAGCATGTAAATATGGTAATAAGAAGC ATGAGACGACGTACGGATACTGATGATTTCAGGCCTGTTAACAATAATACTTTTCAAACAATTACTGCCGCCGCTGATGCGATCGCAACCGTCGATCATCGTTTCCCTCGGGCTACTGCCGTCCAGAAAAGAAGATGGGGCAGTTGTTTGAGTATTTATTGGTGCTTTGGATCTATCAAACAGAGGAAAAGAATCGGGCATGCTGTATTGGTACCAGAACCAAGTCCTTCATCTGAGCCTCATGAAAATACATTACAATCACCAGATATTGTGCTTCCTTTTGCTGCACCTCCTTCTTCCCCTGTTTCCTTACTTCAATCTGAACCACCTTCTGCTATGCAGTCGCCTACTGCTTTAATCTCTTTCACTTCTCTTACTGCTAACATGTATTCTCCTGATGGGCCTTCCTCCATTTTTGCCATTGGCCCATTTGCTCATGAACCACAATTAGTGTCTCCACCTCTGAATTTCTCTACTCTTACTACTGAACCATCAACTCCCTTCACTCCTCCCGAATCTATCCACTTGACTACACCTTCTTCCCCTGAAGTTCCTTTTGCTCAGTTTGTTCAGCCTACTCTTCCGAAAGTTGAGTCTGATAATCAATATACATTTCCTAATGATGATTTCCAATCTTACCAATTCTATCCAGGTAGTCCGGTTAGTCACCTCATATCACCACGGTCGGTTATTTCTCGTTCTGGGGCTTCATCGCCTTTGCCTGACTATGATTTTGCTTCCTTTGGTTCTCAATTTTTGAATTTCCCACTAGAAGTTCCACCTACTTTGTTGAACCTTGACAAACATTCCATTCATAACTGGCGACAACGTCAAAGTACTGATTCTTGTACTCAAGATTCTATAGAATTCAAATCAAGTAATGACTTTGTTTTGAATCCCCAAACTTCAGAATCTATGTCTGATCACCACGCAACAAATGAATCTCAAAATATTCAAATTCTCATCGATGATGGAAGTAAAAAGGAGGAGGAGCCAGGTGCTACTAATCATAGATTCTCATTTGAGCTATCTGATGGGGATGTTTTATTACAAAGCGTAGGAAGTAAGCCATTGGAATCAAATGAACTTGCGGTTGAATCATCGCCAATACATGAACCATTTGAAACGACTAAAGAAAATTCTCCTCATGGTGACCATACTTCAAATGTTATAGAAGAAAAGACAAAAGCAGACGGTGATGAAGCACATCAGCGTCAAGAACATCATTCCGTTACACTTGGGTCTGTGAAGGAATTCAATTTTGATAATGGTAATGGAAGTGACACACATAACCCAAATATAAAATCAGAATGGTGGATTAATGCAAAGGATGGTAGCACAGAAAGCACAGCCACCGGGACCTGGTCATTCTTTCCAATGACGCAACAAAGATGA MRRRTDTDDFRPVNNNTFQTITAAADAIATVDHRFPRATAVQKRRWGSCLSIYWCFGSIKQRKRIGHAVLVPEPSPSSEPHENTLQSPDIVLPFAAPPSSPVSLLQSEPPSAMQSPTALISFTSLTANMYSPDGPSSIFAIGPFAHEPQLVSPPLNFSTLTTEPSTPFTPPESIHLTTPSSPEVPFAQFVQPTLPKVESDNQYTFPNDDFQSYQFYPGSPVSHLISPRSVISRSGASSPLPDYDFASFGSQFLNFPLEVPPTLLNLDKHSIHNWRQRQSTDSCTQDSIEFKSSNDFVLNPQTSESMSDHHATNESQNIQILIDDGSKKEEEPGATNHRFSFELSDGDVLLQSVGSKPLESNELAVESSPIHEPFETTKENSPHGDHTSNVIEEKTKADGDEAHQRQEHHSVTLGSVKEFNFDNGNGSDTHNPNIKSEWWINAKDGSTESTATGTWSFFPMTQQR* Homology
BLAST of CSPI04G05770 vs. ExPASy Swiss-Prot
Match: Q9SRE5 (Uncharacterized protein At1g76660 OS=Arabidopsis thaliana OX=3702 GN=At1g76660 PE=2 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.7e-18 Identity = 68/129 (52.71%), Postives = 81/129 (62.79%), Query Frame = 0
BLAST of CSPI04G05770 vs. ExPASy TrEMBL
Match: A0A0A0KY57 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047980 PE=4 SV=1) HSP 1 Score: 704.5 bits (1817), Expect = 2.2e-199 Identity = 351/352 (99.72%), Postives = 351/352 (99.72%), Query Frame = 0
BLAST of CSPI04G05770 vs. ExPASy TrEMBL
Match: A0A5D3CYQ2 (Mucin-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004630 PE=4 SV=1) HSP 1 Score: 660.2 bits (1702), Expect = 4.8e-186 Identity = 331/353 (93.77%), Postives = 335/353 (94.90%), Query Frame = 0
BLAST of CSPI04G05770 vs. ExPASy TrEMBL
Match: A0A1S3BSY8 (uncharacterized protein LOC103493162 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493162 PE=4 SV=1) HSP 1 Score: 660.2 bits (1702), Expect = 4.8e-186 Identity = 331/353 (93.77%), Postives = 335/353 (94.90%), Query Frame = 0
BLAST of CSPI04G05770 vs. ExPASy TrEMBL
Match: A0A1S3BSB0 (uncharacterized protein LOC103493162 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493162 PE=4 SV=1) HSP 1 Score: 660.2 bits (1702), Expect = 4.8e-186 Identity = 331/353 (93.77%), Postives = 335/353 (94.90%), Query Frame = 0
BLAST of CSPI04G05770 vs. ExPASy TrEMBL
Match: A0A5A7TUB1 (Mucin-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001210 PE=4 SV=1) HSP 1 Score: 655.2 bits (1689), Expect = 1.5e-184 Identity = 328/353 (92.92%), Postives = 334/353 (94.62%), Query Frame = 0
BLAST of CSPI04G05770 vs. NCBI nr
Match: KGN53337.1 (hypothetical protein Csa_015172 [Cucumis sativus]) HSP 1 Score: 704.5 bits (1817), Expect = 4.6e-199 Identity = 351/352 (99.72%), Postives = 351/352 (99.72%), Query Frame = 0
BLAST of CSPI04G05770 vs. NCBI nr
Match: XP_004146564.1 (uncharacterized protein LOC101220378 isoform X1 [Cucumis sativus]) HSP 1 Score: 704.5 bits (1817), Expect = 4.6e-199 Identity = 351/352 (99.72%), Postives = 351/352 (99.72%), Query Frame = 0
BLAST of CSPI04G05770 vs. NCBI nr
Match: XP_031740284.1 (uncharacterized protein LOC101220378 isoform X2 [Cucumis sativus]) HSP 1 Score: 704.5 bits (1817), Expect = 4.6e-199 Identity = 351/352 (99.72%), Postives = 351/352 (99.72%), Query Frame = 0
BLAST of CSPI04G05770 vs. NCBI nr
Match: XP_008452033.1 (PREDICTED: uncharacterized protein LOC103493162 isoform X2 [Cucumis melo] >TYK16635.1 mucin-2 [Cucumis melo var. makuwa]) HSP 1 Score: 660.2 bits (1702), Expect = 9.9e-186 Identity = 331/353 (93.77%), Postives = 335/353 (94.90%), Query Frame = 0
BLAST of CSPI04G05770 vs. NCBI nr
Match: XP_008452032.1 (PREDICTED: uncharacterized protein LOC103493162 isoform X1 [Cucumis melo]) HSP 1 Score: 660.2 bits (1702), Expect = 9.9e-186 Identity = 331/353 (93.77%), Postives = 335/353 (94.90%), Query Frame = 0
BLAST of CSPI04G05770 vs. TAIR 10
Match: AT5G52430.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 134.8 bits (338), Expect = 1.3e-31 Identity = 121/352 (34.38%), Postives = 170/352 (48.30%), Query Frame = 0
BLAST of CSPI04G05770 vs. TAIR 10
Match: AT4G25620.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 109.8 bits (273), Expect = 4.6e-24 Identity = 118/374 (31.55%), Postives = 166/374 (44.39%), Query Frame = 0
BLAST of CSPI04G05770 vs. TAIR 10
Match: AT1G63720.1 (BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1); Has 490 Blast hits to 394 proteins in 96 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi - 88; Plants - 175; Viruses - 14; Other Eukaryotes - 79 (source: NCBI BLink). ) HSP 1 Score: 101.3 bits (251), Expect = 1.6e-21 Identity = 78/161 (48.45%), Postives = 93/161 (57.76%), Query Frame = 0
BLAST of CSPI04G05770 vs. TAIR 10
Match: AT1G76660.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1); Has 353 Blast hits to 231 proteins in 60 species: Archae - 0; Bacteria - 6; Metazoa - 57; Fungi - 22; Plants - 125; Viruses - 4; Other Eukaryotes - 139 (source: NCBI BLink). ) HSP 1 Score: 95.1 bits (235), Expect = 1.2e-19 Identity = 68/129 (52.71%), Postives = 81/129 (62.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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