CSPI04G03020 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGGAGTAATAATAAATAAACAAAAGTTTATTTATACGCATAAAAGGAAAAAAGAAAAAAGAGAAATAATAGAAATCACTCTCTGTTTTCTCCTCATTCTTCTCTGAAAAGCTCCAATGGAGATTAAGCACAAAGCTAAAATTCACCCATCGCCGCCTCCCTCCTCTTCCTCCTCCGTCTTCAAGCTTCTACCAGCCGCTATCTTAGCCTTAGCTTCACTCCTCTCTCTCGACGACCGTGAAGTCCTTGCTTACATGATCGCCAGGTCCATTCAATCCTCTGCATTCACTTCCGCCACTCGCGTTTCCAGGAAGAAATCCACCAAAAAACCATCAATCAATACCGGAAACAGTAATGTTGTTACTACTACTACTACTACGACTAATACTACTTATCATAAAACTCCTTTGTTTAGTTGCGATTGCTTCTACTGCTACACTGCCTACTGGTGCCGCTGGGACTCCTCTCCCAATCGCGAACTAATCCACCAAGCCATCGAGGCGTTTGAAGATCATTTAACCAACGGTGAGAAGCCGAAGAAGAATACCGGTAGAGGAAAGAGAAGAGATAGAATCGGGCGTCAAGGTAGTACTGATAATAAGACTCTACCTGTTGTTCATTGTCCAACGTCGGTTAACGATGAGTGCGTCGACGTTCCATTATCGCCGGTGGTGGAAGATGAAGGAAGTGTGGTGAAGGAAGTTGAAGAGAGTGGTCAGGTGGTGGAAGATGTAGGCGGCGGGGAGCATCAGAAGGGTTTGGCGACGAAGGTACTACCGGACGTGTTGGGGTTTTTTAATTCGCGTTTATGGAGTCTGTGGAGTCCGAATCTTTAAATTATTCTTATTGAATTTCAAAAATTTTCCGCGTCCCAAAAATTATAATAATTTATATATATATATATATATATGTTATTTATTATATTTTTTC TGGGAGTAATAATAAATAAACAAAAGTTTATTTATACGCATAAAAGGAAAAAAGAAAAAAGAGAAATAATAGAAATCACTCTCTGTTTTCTCCTCATTCTTCTCTGAAAAGCTCCAATGGAGATTAAGCACAAAGCTAAAATTCACCCATCGCCGCCTCCCTCCTCTTCCTCCTCCGTCTTCAAGCTTCTACCAGCCGCTATCTTAGCCTTAGCTTCACTCCTCTCTCTCGACGACCGTGAAGTCCTTGCTTACATGATCGCCAGGTCCATTCAATCCTCTGCATTCACTTCCGCCACTCGCGTTTCCAGGAAGAAATCCACCAAAAAACCATCAATCAATACCGGAAACAGTAATGTTGTTACTACTACTACTACTACGACTAATACTACTTATCATAAAACTCCTTTGTTTAGTTGCGATTGCTTCTACTGCTACACTGCCTACTGGTGCCGCTGGGACTCCTCTCCCAATCGCGAACTAATCCACCAAGCCATCGAGGCGTTTGAAGATCATTTAACCAACGGTGAGAAGCCGAAGAAGAATACCGGTAGAGGAAAGAGAAGAGATAGAATCGGGCGTCAAGGTAGTACTGATAATAAGACTCTACCTGTTGTTCATTGTCCAACGTCGGTTAACGATGAGTGCGTCGACGTTCCATTATCGCCGGTGGTGGAAGATGAAGGAAGTGTGGTGAAGGAAGTTGAAGAGAGTGGTCAGGTGGTGGAAGATGTAGGCGGCGGGGAGCATCAGAAGGGTTTGGCGACGAAGGTACTACCGGACGTGTTGGGGTTTTTTAATTCGCGTTTATGGAGTCTGTGGAGTCCGAATCTTTAAATTATTCTTATTGAATTTCAAAAATTTTCCGCGTCCCAAAAATTATAATAATTTATATATATATATATATATATGTTATTTATTATATTTTTTC ATGGAGATTAAGCACAAAGCTAAAATTCACCCATCGCCGCCTCCCTCCTCTTCCTCCTCCGTCTTCAAGCTTCTACCAGCCGCTATCTTAGCCTTAGCTTCACTCCTCTCTCTCGACGACCGTGAAGTCCTTGCTTACATGATCGCCAGGTCCATTCAATCCTCTGCATTCACTTCCGCCACTCGCGTTTCCAGGAAGAAATCCACCAAAAAACCATCAATCAATACCGGAAACAGTAATGTTGTTACTACTACTACTACTACGACTAATACTACTTATCATAAAACTCCTTTGTTTAGTTGCGATTGCTTCTACTGCTACACTGCCTACTGGTGCCGCTGGGACTCCTCTCCCAATCGCGAACTAATCCACCAAGCCATCGAGGCGTTTGAAGATCATTTAACCAACGGTGAGAAGCCGAAGAAGAATACCGGTAGAGGAAAGAGAAGAGATAGAATCGGGCGTCAAGGTAGTACTGATAATAAGACTCTACCTGTTGTTCATTGTCCAACGTCGGTTAACGATGAGTGCGTCGACGTTCCATTATCGCCGGTGGTGGAAGATGAAGGAAGTGTGGTGAAGGAAGTTGAAGAGAGTGGTCAGGTGGTGGAAGATGTAGGCGGCGGGGAGCATCAGAAGGGTTTGGCGACGAAGGTACTACCGGACGTGTTGGGGTTTTTTAATTCGCGTTTATGGAGTCTGTGGAGTCCGAATCTTTAA MEIKHKAKIHPSPPPSSSSSVFKLLPAAILALASLLSLDDREVLAYMIARSIQSSAFTSATRVSRKKSTKKPSINTGNSNVVTTTTTTTNTTYHKTPLFSCDCFYCYTAYWCRWDSSPNRELIHQAIEAFEDHLTNGEKPKKNTGRGKRRDRIGRQGSTDNKTLPVVHCPTSVNDECVDVPLSPVVEDEGSVVKEVEESGQVVEDVGGGEHQKGLATKVLPDVLGFFNSRLWSLWSPNL* Homology
BLAST of CSPI04G03020 vs. ExPASy TrEMBL
Match: A0A0A0KTW2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012360 PE=4 SV=1) HSP 1 Score: 464.5 bits (1194), Expect = 2.6e-127 Identity = 237/239 (99.16%), Postives = 237/239 (99.16%), Query Frame = 0
BLAST of CSPI04G03020 vs. ExPASy TrEMBL
Match: A0A5A7TRT9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001620 PE=4 SV=1) HSP 1 Score: 428.7 bits (1101), Expect = 1.6e-116 Identity = 223/242 (92.15%), Postives = 229/242 (94.63%), Query Frame = 0
BLAST of CSPI04G03020 vs. ExPASy TrEMBL
Match: A0A1S3BXS0 (uncharacterized protein LOC103494567 OS=Cucumis melo OX=3656 GN=LOC103494567 PE=4 SV=1) HSP 1 Score: 428.7 bits (1101), Expect = 1.6e-116 Identity = 223/242 (92.15%), Postives = 229/242 (94.63%), Query Frame = 0
BLAST of CSPI04G03020 vs. ExPASy TrEMBL
Match: A0A6J1GV32 (uncharacterized protein LOC111457737 OS=Cucurbita moschata OX=3662 GN=LOC111457737 PE=4 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 3.5e-87 Identity = 188/251 (74.90%), Postives = 202/251 (80.48%), Query Frame = 0
BLAST of CSPI04G03020 vs. ExPASy TrEMBL
Match: A0A6J1IQ09 (uncharacterized protein LOC111479467 OS=Cucurbita maxima OX=3661 GN=LOC111479467 PE=4 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 8.5e-86 Identity = 186/251 (74.10%), Postives = 200/251 (79.68%), Query Frame = 0
BLAST of CSPI04G03020 vs. NCBI nr
Match: XP_011654323.1 (uncharacterized protein LOC105435337 [Cucumis sativus] >KGN53040.1 hypothetical protein Csa_014807 [Cucumis sativus]) HSP 1 Score: 464.5 bits (1194), Expect = 5.4e-127 Identity = 237/239 (99.16%), Postives = 237/239 (99.16%), Query Frame = 0
BLAST of CSPI04G03020 vs. NCBI nr
Match: KAA0044567.1 (uncharacterized protein E6C27_scaffold46G003170 [Cucumis melo var. makuwa] >TYK17017.1 uncharacterized protein E5676_scaffold130G001620 [Cucumis melo var. makuwa]) HSP 1 Score: 428.7 bits (1101), Expect = 3.3e-116 Identity = 223/242 (92.15%), Postives = 229/242 (94.63%), Query Frame = 0
BLAST of CSPI04G03020 vs. NCBI nr
Match: XP_008454020.1 (PREDICTED: uncharacterized protein LOC103494567 [Cucumis melo]) HSP 1 Score: 428.7 bits (1101), Expect = 3.3e-116 Identity = 223/242 (92.15%), Postives = 229/242 (94.63%), Query Frame = 0
BLAST of CSPI04G03020 vs. NCBI nr
Match: XP_038904588.1 (uncharacterized protein LOC120090946 [Benincasa hispida]) HSP 1 Score: 371.7 bits (953), Expect = 4.8e-99 Identity = 203/246 (82.52%), Postives = 209/246 (84.96%), Query Frame = 0
BLAST of CSPI04G03020 vs. NCBI nr
Match: XP_022955886.1 (uncharacterized protein LOC111457737 [Cucurbita moschata] >KAG6582029.1 hypothetical protein SDJN03_22031, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 331.3 bits (848), Expect = 7.1e-87 Identity = 188/251 (74.90%), Postives = 202/251 (80.48%), Query Frame = 0
BLAST of CSPI04G03020 vs. TAIR 10
Match: AT5G13090.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 147.5 bits (371), Expect = 1.4e-35 Identity = 114/288 (39.58%), Postives = 149/288 (51.74%), Query Frame = 0
BLAST of CSPI04G03020 vs. TAIR 10
Match: AT1G12020.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62422.1); Has 89 Blast hits to 88 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 116.3 bits (290), Expect = 3.4e-26 Identity = 85/249 (34.14%), Postives = 127/249 (51.00%), Query Frame = 0
BLAST of CSPI04G03020 vs. TAIR 10
Match: AT1G24270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13090.1); Has 84 Blast hits to 83 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 115.5 bits (288), Expect = 5.7e-26 Identity = 75/162 (46.30%), Postives = 91/162 (56.17%), Query Frame = 0
BLAST of CSPI04G03020 vs. TAIR 10
Match: AT1G62422.1 (unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 105.5 bits (262), Expect = 5.9e-23 Identity = 65/157 (41.40%), Postives = 89/157 (56.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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