CSPI04G01450 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G01450
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Peptide deformylase
Location	Chr4: 816658 .. 819466 (-)
RNA-Seq Expression	CSPI04G01450
Synteny	CSPI04G01450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAAACCAATTCACCATTAAGGCCCATTTAACGCTTAAACCCTCAGAACTCCGAAGAATACTCTCGTCGCCGGAGGTGGAGCACCGTGAAAACTGAAATGGAGGCAATTCACCGATTCTCCTTCCGTCTCTTCCCAATCTCTCTTGCCGAAAGGTGTCGCAAACCTTCTTTGCTTCCACCTAATTTTCGAAAACTTTTCCACAGGCCCATTTCTTCATCGCCCAACATTCCAAAGTTCATTCCCGTCCCCAAAACCTACAGTTCCTCTTCAACTTCCATTGCCAAAGCCGGTTGGTTTCTTGGTCTCGGAGAGCAGAAGAAAATGAGCTTACCGTCGATTGTGAAGGCTGGTGACCCAGTTTTGCACGAGCCTGCTCGTGAAGTTGATCCTAAGGAAATAGGATCGGAGAAGGTTCAGAAGATAATCGACGATATGATTTTGACCATGAGGAAGGCTCCTGGAGTCGGTCTTGCAGCTCCCCAGATTGGAATTCCATTAAGGGTCAGTTGAAATTACTCGTGCATCTAATCCTTACTCTGTTTTTTTATTATTTGTTTGCTATGTGAATTGGAAATGTGATATTTGGCAGCCGAAATTGTGATTGATGGGGCTGTGTTGTTGAAATTTTTCTCCATTTGCTTGTTATTGGGGCTGTGTTTGATGGGGTTTCGGGTTTCTTTGAGTTCTCCAAATGTGAAATTTCATTGAAAAACCTTGAATTTGGATTCAATATTAAGTGTTTCGTTGTACATTTGTTGTAGATAATTGTTTTGGAAGATACTAAAGAATATATAAGTTATGCACCTAAGGAGGAGATCAAAGCACAAGATAGGCGCTCCTTTGATCTTCTGGTATGGTTATATATTAATGAGAAAGCAAATTGAATTGAATTTCTATCTTTGTTTTTTATGTTCACCAATTTTCACTTTACAATTTGTTAGTTCTGTTGAGTCAGGTGATCATAAACCCAAAGCTAAAAAGTAAAAGCAACAAGACTGCGTTGTTTTTTGAAGGGTGCCTCAGGTAAGATGCAGATTGGCAATCCACTTTTCTCTTTTAGTTCTTTCTCTGAAGTGGTTTGCAAAACCAATTTATTGTTTCTCTCCCCTTCCCTTTCCCTTTCCTTCTTCTTCCTTACATGCTCTCAGGTCCCATCTTGCTAATTTGCGAAATGGAAAATGAACTTCCAAAGTACTTGCTCGATCATTTCTTAAAAGTTAGTTTACTTTTTCTCTTTATCCTAGAAAATATGTGTAGCGAATAAACTATCATGAGTTGACCTTGATAAAGGGCCAAGAGGTTATGAGTTCAATTTGTTGTGGTCACCTACCTAGGTTTTAATAACCTAAAAGAAACACCTACAAATTTCTTTGACATCTAAATGTTATAGGATTAAGTGTGTTGTCCATGAGATTAGTTCAAGTATGCGTAAGTTGGTCCAAACACTCACAAATACCAAAAATAAATGTGCGAGTGGAATTTATATGCTTTCGAGTACAGGCTCCATCCTACAATAAAAATGATGCCGCAGTAGCATTGATTATTTACACGTTGAGATTATAGACCTAATCTCTTCAATGTTCAATTTGACTCAATGTTAAAACATTGATGTGGTTCCAAAGCCGTGGATAGGCAATAGGGGCTCAATCAATCGAACGTAGAAGTTTCTTTTGGATTCAATTGAGTTAATGATCAGTGGCTTGCTTGCCCTCCTAAACAAAAGCACACCACTCTGTGCAAGCTGTTATGTACTAATATCCACTTTTAACAGACTAACTAATATTAACCTCTCAATTAACACTTCTAATATGTATGAAAACCAAAGAAGTCATATTCCTAACGTAAAATGATGCCACAGTAGCGTTGTTTTTCTACACTTCGAAATTATAGTTTATGAGAAAGATGAACTGTTTAGTCCCTTCTTTCATTTAGATAATCTGGATGATGTGACAGTATAATAATCTCCAGCTTTCTTGCTCTTTTCTAATTTTTCCTTTTAACAGATTGTTTCCAGTTGAGGCTGTATCTGAAGTCTATTCTTTACTATCATTGATGAAATCACTATTGTTTTACTTGAGGATTTCTCTCTGACTGTGTGTTCTTTCATGTCTTGTCATCCATGATTTATTCCTTTATTTTTCTACCTTGTAGTGTTGATGGATTTAGAGCAGTGGTAGAACGCTATCTTGATGTTGAGGTAGCTGGTTTCGATCGAGATGGGAATCCTATCAAGGTGGACGCTTCAGGATGGCAGGCTCGAATCTTACAGCACGAATGTGATCATTTGGATGGAACCCTTTATGTCGACAAGATGGTGCCTCGAACATTCAGAACAACTGAAAATTTGACTTTACCTCTTGCTGAGGGTTGCCCCAAGCTTGGAGCTCGCTAACCCCAGCCTGCATTGACATTAGCCTCGAGTTCGTTAAGATTGAATATCCAGATTGGCTTTATATCCAAGTGATAATCATAAAATGCCAAGGAAAGAAAGGAGAGTCAGAGAATTGGAATTTAACTGAATTTTTTTATTACATTCAGGCAAGTGTTTGTTTTGTTGAATTGAAATACAATTTAATAATTAATTTGAGCTTTAAAAATTTTATGAAAAACAATTGTTATAGTCGGTTCAAACGTGGTTCAATTAATAAGACATCTATTACCATCTCAAAGGTTGATAGTTCAATTTTCAACAATTGTAATGTGGAGGATCGAACCATCAACCTTTGAAATGACAATTCATGTCTTATCCACTAAGCTATATTTGGATTGACATGTTCACGGCTATTAATATATATATATTCAAGGAA

mRNA sequence

CACAAACCAATTCACCATTAAGGCCCATTTAACGCTTAAACCCTCAGAACTCCGAAGAATACTCTCGTCGCCGGAGGTGGAGCACCGTGAAAACTGAAATGGAGGCAATTCACCGATTCTCCTTCCGTCTCTTCCCAATCTCTCTTGCCGAAAGGTGTCGCAAACCTTCTTTGCTTCCACCTAATTTTCGAAAACTTTTCCACAGGCCCATTTCTTCATCGCCCAACATTCCAAAGTTCATTCCCGTCCCCAAAACCTACAGTTCCTCTTCAACTTCCATTGCCAAAGCCGGTTGGTTTCTTGGTCTCGGAGAGCAGAAGAAAATGAGCTTACCGTCGATTGTGAAGGCTGGTGACCCAGTTTTGCACGAGCCTGCTCGTGAAGTTGATCCTAAGGAAATAGGATCGGAGAAGGTTCAGAAGATAATCGACGATATGATTTTGACCATGAGGAAGGCTCCTGGAGTCGGTCTTGCAGCTCCCCAGATTGGAATTCCATTAAGGATAATTGTTTTGGAAGATACTAAAGAATATATAAGTTATGCACCTAAGGAGGAGATCAAAGCACAAGATAGGCGCTCCTTTGATCTTCTGGTGATCATAAACCCAAAGCTAAAAAGTAAAAGCAACAAGACTGCGTTGTTTTTTGAAGGGTGCCTCAGTGTTGATGGATTTAGAGCAGTGGTAGAACGCTATCTTGATGTTGAGGTAGCTGGTTTCGATCGAGATGGGAATCCTATCAAGGTGGACGCTTCAGGATGGCAGGCTCGAATCTTACAGCACGAATGTGATCATTTGGATGGAACCCTTTATGTCGACAAGATGGTGCCTCGAACATTCAGAACAACTGAAAATTTGACTTTACCTCTTGCTGAGGGTTGCCCCAAGCTTGGAGCTCGCTAACCCCAGCCTGCATTGACATTAGCCTCGAGTTCGTTAAGATTGAATATCCAGATTGGCTTTATATCCAAGTGATAATCATAAAATGCCAAGGAAAGAAAGGAGAGTCAGAGAATTGGAATTTAACTGAATTTTTTTATTACATTCAGGCAAGTGTTTGTTTTGTTGAATTGAAATACAATTTAATAATTAATTTGAGCTTTAAAAATTTTATGAAAAACAATTGTTATAGTCGGTTCAAACGTGGTTCAATTAATAAGACATCTATTACCATCTCAAAGGTTGATAGTTCAATTTTCAACAATTGTAATGTGGAGGATCGAACCATCAACCTTTGAAATGACAATTCATGTCTTATCCACTAAGCTATATTTGGATTGACATGTTCACGGCTATTAATATATATATATTCAAGGAA

Coding sequence (CDS)

ATGGAGGCAATTCACCGATTCTCCTTCCGTCTCTTCCCAATCTCTCTTGCCGAAAGGTGTCGCAAACCTTCTTTGCTTCCACCTAATTTTCGAAAACTTTTCCACAGGCCCATTTCTTCATCGCCCAACATTCCAAAGTTCATTCCCGTCCCCAAAACCTACAGTTCCTCTTCAACTTCCATTGCCAAAGCCGGTTGGTTTCTTGGTCTCGGAGAGCAGAAGAAAATGAGCTTACCGTCGATTGTGAAGGCTGGTGACCCAGTTTTGCACGAGCCTGCTCGTGAAGTTGATCCTAAGGAAATAGGATCGGAGAAGGTTCAGAAGATAATCGACGATATGATTTTGACCATGAGGAAGGCTCCTGGAGTCGGTCTTGCAGCTCCCCAGATTGGAATTCCATTAAGGATAATTGTTTTGGAAGATACTAAAGAATATATAAGTTATGCACCTAAGGAGGAGATCAAAGCACAAGATAGGCGCTCCTTTGATCTTCTGGTGATCATAAACCCAAAGCTAAAAAGTAAAAGCAACAAGACTGCGTTGTTTTTTGAAGGGTGCCTCAGTGTTGATGGATTTAGAGCAGTGGTAGAACGCTATCTTGATGTTGAGGTAGCTGGTTTCGATCGAGATGGGAATCCTATCAAGGTGGACGCTTCAGGATGGCAGGCTCGAATCTTACAGCACGAATGTGATCATTTGGATGGAACCCTTTATGTCGACAAGATGGTGCCTCGAACATTCAGAACAACTGAAAATTTGACTTTACCTCTTGCTGAGGGTTGCCCCAAGCTTGGAGCTCGCTAA

Protein sequence

MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKLFHRPISSSPNIPKFIPVPKTYSSSSTSIAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTALFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRTTENLTLPLAEGCPKLGAR*

Homology

[Close]

BLAST of CSPI04G01450 vs. ExPASy Swiss-Prot
Match: Q9FV53 (Peptide deformylase 1A, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PDF1A PE=1 SV=3)

HSP 1 Score: 357.1 bits (915), Expect = 1.8e-97
Identity = 186/266 (69.92%), Postives = 207/266 (77.82%), Query Frame = 0


Query: 1   MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKLFHRPISSSPNIPKFIPVPKTYSSSSTS 60
           ME + R S RL P+S A  CR       + R    RP SS     K   +P   SSSS+ 
Sbjct: 11  METLFRVSLRLLPVSAAVTCR-------SIRFPVSRPGSSHLLNRKLYNLPT--SSSSSL 70

Query: 61  IAKAGWFLGLGE-QKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRK 120
             KAGW LGLGE +KK+ LP IV +GDPVLHE AREVDP EIGSE++QKIIDDMI  MR 
Sbjct: 71  STKAGWLLGLGEKKKKVDLPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRL 130

Query: 121 APGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKT 180
           APGVGLAAPQIG+PLRIIVLEDTKEYISYAPKEEI AQ+RR FDL+V++NP LK +SNK 
Sbjct: 131 APGVGLAAPQIGVPLRIIVLEDTKEYISYAPKEEILAQERRHFDLMVMVNPVLKERSNKK 190

Query: 181 ALFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYV 240
           ALFFEGCLSVDGFRA VERYL+V V G+DR G  I+V+ASGWQARILQHECDHLDG LYV
Sbjct: 191 ALFFEGCLSVDGFRAAVERYLEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDGNLYV 250

Query: 241 DKMVPRTFRTTENLTLPLAEGCPKLG 266
           DKMVPRTFRT +NL LPLAEGCPKLG
Sbjct: 251 DKMVPRTFRTVDNLDLPLAEGCPKLG 267

[Close]

BLAST of CSPI04G01450 vs. ExPASy Swiss-Prot
Match: Q9FUZ0 (Peptide deformylase 1A, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PDF1A PE=2 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.8e-94
Identity = 179/277 (64.62%), Postives = 211/277 (76.17%), Query Frame = 0


Query: 1   MEAIHRFSFRLFPISLAER----CRKPSLLPPNFRKL--FHRPI------SSSPNIPKFI 60
           ME   R + R+  +    +    C+K + L  +  +L    RPI         P++   +
Sbjct: 2   MERFPRLAQRVLSVPFTPKYLKSCKKTNPLTSHLMQLRGSQRPIFIQWNLQGRPSVCTDL 61

Query: 61  PVPKTYSSSSTSIAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQK 120
              K YSS++   A+AGWFLGLGE+KK ++P IVKAGDPVLHEP++++  +EIGSE++QK
Sbjct: 62  ISKKNYSSAT---ARAGWFLGLGEKKKQAMPDIVKAGDPVLHEPSQDIPLEEIGSERIQK 121

Query: 121 IIDDMILTMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVII 180
           II++M+  MR APGVGLAAPQIGIPL+IIVLEDT EYISYAPK+E KAQDRR F LLVII
Sbjct: 122 IIEEMVKVMRNAPGVGLAAPQIGIPLKIIVLEDTNEYISYAPKDETKAQDRRPFGLLVII 181

Query: 181 NPKLKSKSNKTALFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQH 240
           NPKLK K NKTALFFEGCLSVDGFRAVVER+L+VEV G DR+G  IKVDASGWQARILQH
Sbjct: 182 NPKLKKKGNKTALFFEGCLSVDGFRAVVERHLEVEVTGLDRNGKAIKVDASGWQARILQH 241

Query: 241 ECDHLDGTLYVDKMVPRTFRTTENLTLPLAEGCPKLG 266
           E DHLDGTLYVDKM PRTFRT ENL LPLA GCPKLG
Sbjct: 242 EYDHLDGTLYVDKMAPRTFRTVENLDLPLAAGCPKLG 275

[Close]

BLAST of CSPI04G01450 vs. ExPASy Swiss-Prot
Match: B6RGY0 (Peptide deformylase 1A, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PDF1A PE=2 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.7e-84
Identity = 157/239 (65.69%), Postives = 187/239 (78.24%), Query Frame = 0


Query: 37  PISSSPNIPKFIPVPKTYSSSSTSIAKAGWFLGL-------GEQKKMSL-PSIVKAGDPV 96
           P + + +  +  P  + +SS   S    GW  GL       G    M++ P  VKAGDPV
Sbjct: 22  PTAVAASARRASPGGRRWSSVRASAGGGGWLSGLLGGKGGGGAPTAMTVTPGTVKAGDPV 81

Query: 97  LHEPAREVDPKEIGSEKVQKIIDDMILTMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISY 156
           LHEPA++V P +I SEKVQ +ID M+  MRKAPGVGLAAPQIG+PL+IIVLEDT+EYISY
Sbjct: 82  LHEPAQDVAPGDIPSEKVQGVIDRMVAVMRKAPGVGLAAPQIGVPLKIIVLEDTQEYISY 141

Query: 157 APKEEIKAQDRRSFDLLVIINPKLKSKSNKTALFFEGCLSVDGFRAVVERYLDVEVAGFD 216
           APK++I+AQDRR FDLLVIINPKLK+ S +TALFFEGCLSVDG+RA+VER+LDVEV+G D
Sbjct: 142 APKKDIEAQDRRPFDLLVIINPKLKTTSKRTALFFEGCLSVDGYRALVERHLDVEVSGLD 201

Query: 217 RDGNPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRTTENLTLPLAEGCPKLGAR 268
           R+G PIKV+ASGWQARILQHECDHL+GTLYVD MVPRTFR  +NL LPL  GCP +GAR
Sbjct: 202 RNGRPIKVEASGWQARILQHECDHLEGTLYVDTMVPRTFRIVDNLDLPLPVGCPPIGAR 260

[Close]

BLAST of CSPI04G01450 vs. ExPASy Swiss-Prot
Match: Q7NJV3 (Peptide deformylase 1 OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 GN=def1 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.4e-38
Identity = 80/172 (46.51%), Postives = 111/172 (64.53%), Query Frame = 0


Query: 81  IVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRKAPGVGLAAPQIGIPLRIIVLE 140
           IVK GDPVL   A+ ++  EI SE +Q++I  M   MR+APGVGLAAPQ+G+ ++++V+E
Sbjct: 48  IVKTGDPVLRLTAKPLNSDEIQSEAIQQLIAAMAERMREAPGVGLAAPQVGVSVQLVVIE 107

Query: 141 DTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTALFFEGCLSVDGFRAVVERYL 200
           D  EYI      E + ++R      V+INP L  +  ++A+FFEGCLS+ G++ +V R  
Sbjct: 108 DRPEYIERLSGAERREREREPVPFHVLINPVLSVEGEESAVFFEGCLSIPGYQGLVARAR 167

Query: 201 DVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRTTEN 253
            V V   D    P+ + A GW ARILQHE DHL+G L VD+M  +TF T EN
Sbjct: 168 VVRVEALDERAAPVVIRAHGWYARILQHEIDHLNGLLCVDRMDLQTFSTLEN 219

[Close]

BLAST of CSPI04G01450 vs. ExPASy Swiss-Prot
Match: Q8G534 (Peptide deformylase 1 OS=Bifidobacterium longum (strain NCC 2705) OX=206672 GN=def1 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 4.5e-32
Identity = 78/179 (43.58%), Postives = 104/179 (58.10%), Query Frame = 0


Query: 75  KMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRKAPGVGLAAPQIGIPL 134
           K  L  IV+AG+PVL +     +  ++    + K+ID M  TM +APGVGLAA QIG+ L
Sbjct: 25  KEKLLPIVQAGEPVLRQRTVAYN-GQLSKRTLAKLIDTMHTTMLEAPGVGLAATQIGLGL 84

Query: 135 RIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTALFFEGCLSVDGFRA 194
            + V+ED      +   +E   ++   F   VIINP  K  S+KTA F+EGCLS DG++A
Sbjct: 85  ALAVVED------HVRDDEDDPREIAEFPFHVIINPSYKPTSDKTASFYEGCLSFDGYQA 144

Query: 195 VVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRTTENL 254
           V +R+LD+     D DG        GW ARI QHE DHL G LY+D+   R+  T ENL
Sbjct: 145 VRKRWLDITAEWDDEDGKHHSEPLHGWPARIFQHETDHLSGELYIDRAEIRSLTTNENL 196

[Close]

BLAST of CSPI04G01450 vs. ExPASy TrEMBL
Match: A0A0A0KWR7 (Peptide deformylase OS=Cucumis sativus OX=3659 GN=Csa_4G004880 PE=3 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 2.1e-149
Identity = 266/267 (99.63%), Postives = 266/267 (99.63%), Query Frame = 0


Query: 1   MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKLFHRPISSSPNIPKFIPVPKTYSSSSTS 60
           MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKL HRPISSSPNIPKFIPVPKTYSSSSTS
Sbjct: 1   MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKLIHRPISSSPNIPKFIPVPKTYSSSSTS 60

Query: 61  IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRKA 120
           IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRKA
Sbjct: 61  IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRKA 120

Query: 121 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTA 180
           PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTA
Sbjct: 121 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTA 180

Query: 181 LFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVD 240
           LFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVD
Sbjct: 181 LFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVD 240

Query: 241 KMVPRTFRTTENLTLPLAEGCPKLGAR 268
           KMVPRTFRTTENLTLPLAEGCPKLGAR
Sbjct: 241 KMVPRTFRTTENLTLPLAEGCPKLGAR 267

[Close]

BLAST of CSPI04G01450 vs. ExPASy TrEMBL
Match: A0A5D3E1C7 (Peptide deformylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001640 PE=3 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 1.5e-144
Identity = 256/267 (95.88%), Postives = 260/267 (97.38%), Query Frame = 0


Query: 1   MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKLFHRPISSSPNIPKFIPVPKTYSSSSTS 60
           MEAIHRFSFRLFPISLAERCRKPSLL PNFRKL HR ISSSPNIPKFIP PKTYSSSSTS
Sbjct: 1   MEAIHRFSFRLFPISLAERCRKPSLLAPNFRKLIHRTISSSPNIPKFIPAPKTYSSSSTS 60

Query: 61  IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRKA 120
           IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEK+QKIIDDM+LTMRKA
Sbjct: 61  IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLTMRKA 120

Query: 121 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTA 180
           PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRR FDLLVIINPKLKSKSNKTA
Sbjct: 121 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA 180

Query: 181 LFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVD 240
           LFFEGCLSVDGFRAVVERYLDVE+AGFDR+GNPIKVDASGWQARILQHECDHLDGTLYVD
Sbjct: 181 LFFEGCLSVDGFRAVVERYLDVEIAGFDRNGNPIKVDASGWQARILQHECDHLDGTLYVD 240

Query: 241 KMVPRTFRTTENLTLPLAEGCPKLGAR 268
           KMVPRTFRT ENLTLPLAEGCPKLG R
Sbjct: 241 KMVPRTFRTAENLTLPLAEGCPKLGVR 267

[Close]

BLAST of CSPI04G01450 vs. ExPASy TrEMBL
Match: A0A1S3BY63 (Peptide deformylase OS=Cucumis melo OX=3656 GN=LOC103494711 PE=3 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.3e-143
Identity = 255/267 (95.51%), Postives = 259/267 (97.00%), Query Frame = 0


Query: 1   MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKLFHRPISSSPNIPKFIPVPKTYSSSSTS 60
           MEAIHRFSFRLFPISLAERCRKPSLL PNFRKL HR ISSSPNIPKFIP  KTYSSSSTS
Sbjct: 1   MEAIHRFSFRLFPISLAERCRKPSLLAPNFRKLIHRTISSSPNIPKFIPAXKTYSSSSTS 60

Query: 61  IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRKA 120
           IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEK+QKIIDDM+LTMRKA
Sbjct: 61  IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLTMRKA 120

Query: 121 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTA 180
           PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRR FDLLVIINPKLKSKSNKTA
Sbjct: 121 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA 180

Query: 181 LFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVD 240
           LFFEGCLSVDGFRAVVERYLDVE+AGFDR+GNPIKVDASGWQARILQHECDHLDGTLYVD
Sbjct: 181 LFFEGCLSVDGFRAVVERYLDVEIAGFDRNGNPIKVDASGWQARILQHECDHLDGTLYVD 240

Query: 241 KMVPRTFRTTENLTLPLAEGCPKLGAR 268
           KMVPRTFRT ENLTLPLAEGCPKLG R
Sbjct: 241 KMVPRTFRTAENLTLPLAEGCPKLGVR 267

[Close]

BLAST of CSPI04G01450 vs. ExPASy TrEMBL
Match: A0A6J1DL13 (Peptide deformylase OS=Momordica charantia OX=3673 GN=LOC111021042 PE=3 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 2.4e-129
Identity = 234/269 (86.99%), Postives = 244/269 (90.71%), Query Frame = 0


Query: 1   MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKLFHRPISS--SPNIPKFIPVPKTYSSSS 60
           M+ IHRFSFRLFPISLA  C  PS   P F KLFHRP SS     IPKF+P  +TYSSSS
Sbjct: 1   MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSS 60

Query: 61  TSIAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMR 120
           TSIAKAGWFLGLGEQKKMSLP+IVKAGDPVLHEPAREVDPKEIGSEK+QKIIDDM+L MR
Sbjct: 61  TSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMR 120

Query: 121 KAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNK 180
           KAPGVGLAAPQIGIPLRIIVLEDT+EYISYAPKEEIKAQDRR FDLLVI+NPKLK KSNK
Sbjct: 121 KAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNK 180

Query: 181 TALFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLY 240
           TALFFEGCLSVDGFRAVVER+LDVEV G DRDGNPIKVDASGWQARILQHECDHLDGTLY
Sbjct: 181 TALFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLY 240

Query: 241 VDKMVPRTFRTTENLTLPLAEGCPKLGAR 268
           VDKM+PRTFR  ENLTLPLAEGCPKLGAR
Sbjct: 241 VDKMLPRTFRMAENLTLPLAEGCPKLGAR 269

[Close]

BLAST of CSPI04G01450 vs. ExPASy TrEMBL
Match: A0A6J1KDU7 (Peptide deformylase OS=Cucurbita maxima OX=3661 GN=LOC111493439 PE=3 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.3e-122
Identity = 222/265 (83.77%), Postives = 234/265 (88.30%), Query Frame = 0


Query: 1   MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKLFHRPISSSPNIPKFIPVPKTYSSSSTS 60
           ME +HRFSFRL P SLAERC KPS   P FR L   P SSS +IPKFIP  K+YSSS + 
Sbjct: 1   METVHRFSFRLLPFSLAERCLKPSSATPRFRNLICGPTSSSNHIPKFIPARKSYSSSFSP 60

Query: 61  IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRKA 120
           IAKAGWFLGLG++ K SLP IV AGDPVLHEPAREVDPKEIGS+K+QKIIDDM++ MR A
Sbjct: 61  IAKAGWFLGLGDKNKTSLPKIVNAGDPVLHEPAREVDPKEIGSDKIQKIIDDMVVAMRNA 120

Query: 121 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTA 180
           PGVGLAA QIGIPLRIIVLEDTKEYISYAPKEEIKAQDRR FDLLVIINPKLKSKSNKTA
Sbjct: 121 PGVGLAATQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA 180

Query: 181 LFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVD 240
           LFFEGCLSVDGFRAVVER+LDVEV G DR GN IKVDASGWQARILQHECDHL+GTLYVD
Sbjct: 181 LFFEGCLSVDGFRAVVERHLDVEVVGLDRYGNHIKVDASGWQARILQHECDHLEGTLYVD 240

Query: 241 KMVPRTFRTTENLTLPLAEGCPKLG 266
           KMVPRTFRT ENLTLPLAEGCPKLG
Sbjct: 241 KMVPRTFRTAENLTLPLAEGCPKLG 265

[Close]

BLAST of CSPI04G01450 vs. NCBI nr
Match: XP_004152208.2 (peptide deformylase 1A, chloroplastic/mitochondrial [Cucumis sativus] >KGN52877.1 hypothetical protein Csa_015090 [Cucumis sativus])

HSP 1 Score: 538.1 bits (1385), Expect = 4.3e-149
Identity = 266/267 (99.63%), Postives = 266/267 (99.63%), Query Frame = 0


Query: 1   MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKLFHRPISSSPNIPKFIPVPKTYSSSSTS 60
           MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKL HRPISSSPNIPKFIPVPKTYSSSSTS
Sbjct: 1   MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKLIHRPISSSPNIPKFIPVPKTYSSSSTS 60

Query: 61  IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRKA 120
           IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRKA
Sbjct: 61  IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRKA 120

Query: 121 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTA 180
           PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTA
Sbjct: 121 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTA 180

Query: 181 LFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVD 240
           LFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVD
Sbjct: 181 LFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVD 240

Query: 241 KMVPRTFRTTENLTLPLAEGCPKLGAR 268
           KMVPRTFRTTENLTLPLAEGCPKLGAR
Sbjct: 241 KMVPRTFRTTENLTLPLAEGCPKLGAR 267

[Close]

BLAST of CSPI04G01450 vs. NCBI nr
Match: KAA0044431.1 (peptide deformylase 1A [Cucumis melo var. makuwa] >TYK29558.1 peptide deformylase 1A [Cucumis melo var. makuwa])

HSP 1 Score: 521.9 bits (1343), Expect = 3.2e-144
Identity = 256/267 (95.88%), Postives = 260/267 (97.38%), Query Frame = 0


Query: 1   MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKLFHRPISSSPNIPKFIPVPKTYSSSSTS 60
           MEAIHRFSFRLFPISLAERCRKPSLL PNFRKL HR ISSSPNIPKFIP PKTYSSSSTS
Sbjct: 1   MEAIHRFSFRLFPISLAERCRKPSLLAPNFRKLIHRTISSSPNIPKFIPAPKTYSSSSTS 60

Query: 61  IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRKA 120
           IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEK+QKIIDDM+LTMRKA
Sbjct: 61  IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLTMRKA 120

Query: 121 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTA 180
           PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRR FDLLVIINPKLKSKSNKTA
Sbjct: 121 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA 180

Query: 181 LFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVD 240
           LFFEGCLSVDGFRAVVERYLDVE+AGFDR+GNPIKVDASGWQARILQHECDHLDGTLYVD
Sbjct: 181 LFFEGCLSVDGFRAVVERYLDVEIAGFDRNGNPIKVDASGWQARILQHECDHLDGTLYVD 240

Query: 241 KMVPRTFRTTENLTLPLAEGCPKLGAR 268
           KMVPRTFRT ENLTLPLAEGCPKLG R
Sbjct: 241 KMVPRTFRTAENLTLPLAEGCPKLGVR 267

[Close]

BLAST of CSPI04G01450 vs. NCBI nr
Match: XP_008454248.1 (PREDICTED: LOW QUALITY PROTEIN: peptide deformylase 1A, chloroplastic/mitochondrial [Cucumis melo])

HSP 1 Score: 518.8 bits (1335), Expect = 2.7e-143
Identity = 255/267 (95.51%), Postives = 259/267 (97.00%), Query Frame = 0


Query: 1   MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKLFHRPISSSPNIPKFIPVPKTYSSSSTS 60
           MEAIHRFSFRLFPISLAERCRKPSLL PNFRKL HR ISSSPNIPKFIP  KTYSSSSTS
Sbjct: 1   MEAIHRFSFRLFPISLAERCRKPSLLAPNFRKLIHRTISSSPNIPKFIPAXKTYSSSSTS 60

Query: 61  IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRKA 120
           IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEK+QKIIDDM+LTMRKA
Sbjct: 61  IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLTMRKA 120

Query: 121 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTA 180
           PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRR FDLLVIINPKLKSKSNKTA
Sbjct: 121 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA 180

Query: 181 LFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVD 240
           LFFEGCLSVDGFRAVVERYLDVE+AGFDR+GNPIKVDASGWQARILQHECDHLDGTLYVD
Sbjct: 181 LFFEGCLSVDGFRAVVERYLDVEIAGFDRNGNPIKVDASGWQARILQHECDHLDGTLYVD 240

Query: 241 KMVPRTFRTTENLTLPLAEGCPKLGAR 268
           KMVPRTFRT ENLTLPLAEGCPKLG R
Sbjct: 241 KMVPRTFRTAENLTLPLAEGCPKLGVR 267

[Close]

BLAST of CSPI04G01450 vs. NCBI nr
Match: XP_038878019.1 (peptide deformylase 1A, chloroplastic/mitochondrial [Benincasa hispida])

HSP 1 Score: 490.3 bits (1261), Expect = 1.0e-134
Identity = 241/267 (90.26%), Postives = 251/267 (94.01%), Query Frame = 0


Query: 1   MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKLFHRPISSSPNIPKFIPVPKTYSSSSTS 60
           ME IHRFSFRLFPISLAERC KPS   PNFR   +R ISSS NIPKFIPV KTY SSSTS
Sbjct: 1   METIHRFSFRLFPISLAERCLKPSSPTPNFRNFIYRAISSSHNIPKFIPVLKTYRSSSTS 60

Query: 61  IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRKA 120
           IAKAGWFLGLGE+KKM LP+IVKAGDPVLHEPAREVDPKEIGSEK+QKIID+M+L MRKA
Sbjct: 61  IAKAGWFLGLGEKKKMGLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDNMVLAMRKA 120

Query: 121 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTA 180
           PG+GLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRR FDLLVIINPKLKSKSNKTA
Sbjct: 121 PGIGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA 180

Query: 181 LFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVD 240
           LFFEGC+SVDGFRAVVERYL+VEVAGFDRDG+PIKVDASGWQARILQHECDHLDGTLYVD
Sbjct: 181 LFFEGCISVDGFRAVVERYLEVEVAGFDRDGSPIKVDASGWQARILQHECDHLDGTLYVD 240

Query: 241 KMVPRTFRTTENLTLPLAEGCPKLGAR 268
           KMVPRTFRT ENLTLPLAEGCPKLGAR
Sbjct: 241 KMVPRTFRTAENLTLPLAEGCPKLGAR 267

[Close]

BLAST of CSPI04G01450 vs. NCBI nr
Match: XP_022153571.1 (peptide deformylase 1A, chloroplastic/mitochondrial [Momordica charantia])

HSP 1 Score: 471.5 bits (1212), Expect = 4.9e-129
Identity = 234/269 (86.99%), Postives = 244/269 (90.71%), Query Frame = 0


Query: 1   MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKLFHRPISS--SPNIPKFIPVPKTYSSSS 60
           M+ IHRFSFRLFPISLA  C  PS   P F KLFHRP SS     IPKF+P  +TYSSSS
Sbjct: 1   MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSS 60

Query: 61  TSIAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMR 120
           TSIAKAGWFLGLGEQKKMSLP+IVKAGDPVLHEPAREVDPKEIGSEK+QKIIDDM+L MR
Sbjct: 61  TSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMR 120

Query: 121 KAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNK 180
           KAPGVGLAAPQIGIPLRIIVLEDT+EYISYAPKEEIKAQDRR FDLLVI+NPKLK KSNK
Sbjct: 121 KAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNK 180

Query: 181 TALFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLY 240
           TALFFEGCLSVDGFRAVVER+LDVEV G DRDGNPIKVDASGWQARILQHECDHLDGTLY
Sbjct: 181 TALFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLY 240

Query: 241 VDKMVPRTFRTTENLTLPLAEGCPKLGAR 268
           VDKM+PRTFR  ENLTLPLAEGCPKLGAR
Sbjct: 241 VDKMLPRTFRMAENLTLPLAEGCPKLGAR 269

[Close]

BLAST of CSPI04G01450 vs. TAIR 10
Match: AT1G15390.1 (peptide deformylase 1A )

HSP 1 Score: 357.1 bits (915), Expect = 1.3e-98
Identity = 186/266 (69.92%), Postives = 207/266 (77.82%), Query Frame = 0


Query: 1   MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKLFHRPISSSPNIPKFIPVPKTYSSSSTS 60
           ME + R S RL P+S A  CR       + R    RP SS     K   +P   SSSS+ 
Sbjct: 11  METLFRVSLRLLPVSAAVTCR-------SIRFPVSRPGSSHLLNRKLYNLPT--SSSSSL 70

Query: 61  IAKAGWFLGLGE-QKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRK 120
             KAGW LGLGE +KK+ LP IV +GDPVLHE AREVDP EIGSE++QKIIDDMI  MR 
Sbjct: 71  STKAGWLLGLGEKKKKVDLPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRL 130

Query: 121 APGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKT 180
           APGVGLAAPQIG+PLRIIVLEDTKEYISYAPKEEI AQ+RR FDL+V++NP LK +SNK 
Sbjct: 131 APGVGLAAPQIGVPLRIIVLEDTKEYISYAPKEEILAQERRHFDLMVMVNPVLKERSNKK 190

Query: 181 ALFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYV 240
           ALFFEGCLSVDGFRA VERYL+V V G+DR G  I+V+ASGWQARILQHECDHLDG LYV
Sbjct: 191 ALFFEGCLSVDGFRAAVERYLEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDGNLYV 250

Query: 241 DKMVPRTFRTTENLTLPLAEGCPKLG 266
           DKMVPRTFRT +NL LPLAEGCPKLG
Sbjct: 251 DKMVPRTFRTVDNLDLPLAEGCPKLG 267

[Close]

BLAST of CSPI04G01450 vs. TAIR 10
Match: AT5G14660.1 (peptide deformylase 1B )

HSP 1 Score: 96.7 bits (239), Expect = 3.1e-20
Identity = 57/162 (35.19%), Postives = 85/162 (52.47%), Query Frame = 0


Query: 81  IVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRKAPGVGLAAPQIGIPLRIIVLE 140
           IV+  DP+L    + +D   I  E ++ ++D M   M K  G+GL+APQ+G+ ++++V  
Sbjct: 83  IVEYPDPILRAKNKRID---IFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 142

Query: 141 DTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTALFFEGCLSVDGFRAVVERYL 200
              E     P E  +         +V++NPK+K  S+K   F EGCLS  G  A V R  
Sbjct: 143 PAGE-----PGEGKE---------IVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQ 202

Query: 201 DVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKM 243
            V++   D  G    +  S   ARI QHE DHL+G L+ D+M
Sbjct: 203 SVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRM 227

[Close]

BLAST of CSPI04G01450 vs. TAIR 10
Match: AT5G14660.2 (peptide deformylase 1B )

HSP 1 Score: 96.7 bits (239), Expect = 3.1e-20
Identity = 57/162 (35.19%), Postives = 85/162 (52.47%), Query Frame = 0


Query: 81  IVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRKAPGVGLAAPQIGIPLRIIVLE 140
           IV+  DP+L    + +D   I  E ++ ++D M   M K  G+GL+APQ+G+ ++++V  
Sbjct: 83  IVEYPDPILRAKNKRID---IFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 142

Query: 141 DTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTALFFEGCLSVDGFRAVVERYL 200
              E     P E  +         +V++NPK+K  S+K   F EGCLS  G  A V R  
Sbjct: 143 PAGE-----PGEGKE---------IVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQ 202

Query: 201 DVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKM 243
            V++   D  G    +  S   ARI QHE DHL+G L+ D+M
Sbjct: 203 SVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRM 227

The following BLAST results are available for this feature:

BLAST of CSPI04G01450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FV53	1.8e-97	69.92	Peptide deformylase 1A, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3...	[more]
Q9FUZ0	1.8e-94	64.62	Peptide deformylase 1A, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PDF1A P...	[more]
B6RGY0	1.7e-84	65.69	Peptide deformylase 1A, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q7NJV3	2.4e-38	46.51	Peptide deformylase 1 OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX...	[more]
Q8G534	4.5e-32	43.58	Peptide deformylase 1 OS=Bifidobacterium longum (strain NCC 2705) OX=206672 GN=d...	[more]

BLAST of CSPI04G01450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWR7	2.1e-149	99.63	Peptide deformylase OS=Cucumis sativus OX=3659 GN=Csa_4G004880 PE=3 SV=1	[more]
A0A5D3E1C7	1.5e-144	95.88	Peptide deformylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G...	[more]
A0A1S3BY63	1.3e-143	95.51	Peptide deformylase OS=Cucumis melo OX=3656 GN=LOC103494711 PE=3 SV=1	[more]
A0A6J1DL13	2.4e-129	86.99	Peptide deformylase OS=Momordica charantia OX=3673 GN=LOC111021042 PE=3 SV=1	[more]
A0A6J1KDU7	1.3e-122	83.77	Peptide deformylase OS=Cucurbita maxima OX=3661 GN=LOC111493439 PE=3 SV=1	[more]

BLAST of CSPI04G01450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152208.2	4.3e-149	99.63	peptide deformylase 1A, chloroplastic/mitochondrial [Cucumis sativus] >KGN52877....	[more]
KAA0044431.1	3.2e-144	95.88	peptide deformylase 1A [Cucumis melo var. makuwa] >TYK29558.1 peptide deformylas...	[more]
XP_008454248.1	2.7e-143	95.51	PREDICTED: LOW QUALITY PROTEIN: peptide deformylase 1A, chloroplastic/mitochondr...	[more]
XP_038878019.1	1.0e-134	90.26	peptide deformylase 1A, chloroplastic/mitochondrial [Benincasa hispida]	[more]
XP_022153571.1	4.9e-129	86.99	peptide deformylase 1A, chloroplastic/mitochondrial [Momordica charantia]	[more]

BLAST of CSPI04G01450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15390.1	1.3e-98	69.92	peptide deformylase 1A	[more]
AT5G14660.1	3.1e-20	35.19	peptide deformylase 1B	[more]
AT5G14660.2	3.1e-20	35.19	peptide deformylase 1B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023635	Peptide deformylase	PRINTS	PR01576	PDEFORMYLASE	coord: 196..214 score: 34.5 coord: 215..244 score: 45.74 coord: 111..140 score: 49.44 coord: 184..195 score: 58.95
IPR023635	Peptide deformylase	TIGRFAM	TIGR00079	TIGR00079	coord: 81..246 e-value: 3.7E-37 score: 125.3
IPR023635	Peptide deformylase	PFAM	PF01327	Pep_deformylase	coord: 80..245 e-value: 1.4E-50 score: 171.0
IPR023635	Peptide deformylase	PANTHER	PTHR10458	PEPTIDE DEFORMYLASE	coord: 1..266
IPR023635	Peptide deformylase	HAMAP	MF_00163	Pep_deformylase	coord: 77..253 score: 27.427557
IPR023635	Peptide deformylase	CDD	cd00487	Pep_deformylase	coord: 81..238 e-value: 2.90698E-68 score: 205.798
IPR036821	Peptide deformylase superfamily	GENE3D	3.90.45.10	Peptide deformylase	coord: 76..267 e-value: 7.6E-70 score: 235.9
IPR036821	Peptide deformylase superfamily	SUPERFAMILY	56420	Peptide deformylase	coord: 73..249
None	No IPR available	PANTHER	PTHR10458:SF18	PEPTIDE DEFORMYLASE	coord: 1..266

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G01450.1	CSPI04G01450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043686	co-translational protein modification
biological_process	GO:0031365	N-terminal protein amino acid modification
biological_process	GO:0018206	peptidyl-methionine modification
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0042586	peptide deformylase activity