CSPI04G01210 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTTTGAAATTTCTTCTCCAATTCCATATCTTCTCAACGCTAATGGTTTCGGCAATGGAGTATTGGAAGTTCAGTTAAGTTATCTGGAACGTGCAATTTCCGTTTCTTCATTCTCCCAACGAATCCTCTACGAAACTCAACCCACTCCATTCAACAATGCACTCTTCTATCTCTCTGTGCACCAACTTCAACATCCCTTGTTCCACATTCGGCAATTTCTCTACTCACTCAACATTCGAAGGGAAACCATAGCTCGGCAAATCGCTTCCTACGTCGCCCACATGTGTAACGGGAACACGGGGTGGAATTCGAATTTCTATGTCATCGCTAGAGTGGATTTGGTCCGAGTGATCCGGATAGAAGAACAACCAAGGGCGGAAGGATGGAGAGGAGTGGCGGTGGAGAGGTTGAGTAAGTTGAAATCGGAGGAGGAAAAGGGAGATTGCAGTGTGTGTTTGGATGAATTGGATTGTGAAAAGAGGGAGGTTATAAGGATTCCTTGCGGCCATGTTTACCATGAATCGTGCATCTTCAAGTGGCTTAACAGCAGTAACTCTTGCCCTTTGTGTAGAAGCTCATTCCCACTACACAATGTCACAAACTGA ATGTCTTTTGAAATTTCTTCTCCAATTCCATATCTTCTCAACGCTAATGGTTTCGGCAATGGAGTATTGGAAGTTCAGTTAAGTTATCTGGAACGTGCAATTTCCGTTTCTTCATTCTCCCAACGAATCCTCTACGAAACTCAACCCACTCCATTCAACAATGCACTCTTCTATCTCTCTGTGCACCAACTTCAACATCCCTTGTTCCACATTCGGCAATTTCTCTACTCACTCAACATTCGAAGGGAAACCATAGCTCGGCAAATCGCTTCCTACGTCGCCCACATGTGTAACGGGAACACGGGGTGGAATTCGAATTTCTATGTCATCGCTAGAGTGGATTTGGTCCGAGTGATCCGGATAGAAGAACAACCAAGGGCGGAAGGATGGAGAGGAGTGGCGGTGGAGAGGTTGAGTAAGTTGAAATCGGAGGAGGAAAAGGGAGATTGCAGTGTGTGTTTGGATGAATTGGATTGTGAAAAGAGGGAGGTTATAAGGATTCCTTGCGGCCATGTTTACCATGAATCGTGCATCTTCAAGTGGCTTAACAGCAGTAACTCTTGCCCTTTGTGTAGAAGCTCATTCCCACTACACAATGTCACAAACTGA ATGTCTTTTGAAATTTCTTCTCCAATTCCATATCTTCTCAACGCTAATGGTTTCGGCAATGGAGTATTGGAAGTTCAGTTAAGTTATCTGGAACGTGCAATTTCCGTTTCTTCATTCTCCCAACGAATCCTCTACGAAACTCAACCCACTCCATTCAACAATGCACTCTTCTATCTCTCTGTGCACCAACTTCAACATCCCTTGTTCCACATTCGGCAATTTCTCTACTCACTCAACATTCGAAGGGAAACCATAGCTCGGCAAATCGCTTCCTACGTCGCCCACATGTGTAACGGGAACACGGGGTGGAATTCGAATTTCTATGTCATCGCTAGAGTGGATTTGGTCCGAGTGATCCGGATAGAAGAACAACCAAGGGCGGAAGGATGGAGAGGAGTGGCGGTGGAGAGGTTGAGTAAGTTGAAATCGGAGGAGGAAAAGGGAGATTGCAGTGTGTGTTTGGATGAATTGGATTGTGAAAAGAGGGAGGTTATAAGGATTCCTTGCGGCCATGTTTACCATGAATCGTGCATCTTCAAGTGGCTTAACAGCAGTAACTCTTGCCCTTTGTGTAGAAGCTCATTCCCACTACACAATGTCACAAACTGA MSFEISSPIPYLLNANGFGNGVLEVQLSYLERAISVSSFSQRILYETQPTPFNNALFYLSVHQLQHPLFHIRQFLYSLNIRRETIARQIASYVAHMCNGNTGWNSNFYVIARVDLVRVIRIEEQPRAEGWRGVAVERLSKLKSEEEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLNSSNSCPLCRSSFPLHNVTN* Homology
BLAST of CSPI04G01210 vs. ExPASy Swiss-Prot
Match: Q9CY62 (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus OX=10090 GN=Rnf181 PE=1 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 9.0e-09 Identity = 29/64 (45.31%), Postives = 38/64 (59.38%), Query Frame = 0
BLAST of CSPI04G01210 vs. ExPASy Swiss-Prot
Match: Q3T0W3 (E3 ubiquitin-protein ligase RNF181 OS=Bos taurus OX=9913 GN=RNF181 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.2e-08 Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 0
BLAST of CSPI04G01210 vs. ExPASy Swiss-Prot
Match: Q6AXU4 (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.2e-08 Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 0
BLAST of CSPI04G01210 vs. ExPASy Swiss-Prot
Match: Q5M974 (E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis OX=8364 GN=rnf181 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.2e-08 Identity = 31/67 (46.27%), Postives = 40/67 (59.70%), Query Frame = 0
BLAST of CSPI04G01210 vs. ExPASy Swiss-Prot
Match: Q9P0P0 (E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens OX=9606 GN=RNF181 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.0e-08 Identity = 28/69 (40.58%), Postives = 41/69 (59.42%), Query Frame = 0
BLAST of CSPI04G01210 vs. ExPASy TrEMBL
Match: A0A0A0KYC0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G003650 PE=4 SV=1) HSP 1 Score: 416.4 bits (1069), Expect = 6.9e-113 Identity = 201/202 (99.50%), Postives = 202/202 (100.00%), Query Frame = 0
BLAST of CSPI04G01210 vs. ExPASy TrEMBL
Match: A0A5A7TLM1 (E3 ubiquitin-protein ligase RNF181-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001430 PE=4 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 1.2e-85 Identity = 168/221 (76.02%), Postives = 179/221 (81.00%), Query Frame = 0
BLAST of CSPI04G01210 vs. ExPASy TrEMBL
Match: A0A1S4DZR1 (uncharacterized protein LOC107991269 OS=Cucumis melo OX=3656 GN=LOC107991269 PE=4 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 1.2e-85 Identity = 168/221 (76.02%), Postives = 179/221 (81.00%), Query Frame = 0
BLAST of CSPI04G01210 vs. ExPASy TrEMBL
Match: A0A5D3E1S5 (E3 ubiquitin-protein ligase RNF181-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G00800 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 1.9e-49 Identity = 118/223 (52.91%), Postives = 149/223 (66.82%), Query Frame = 0
BLAST of CSPI04G01210 vs. ExPASy TrEMBL
Match: A0A1S4DUZ4 (E3 ubiquitin-protein ligase RNF181-like OS=Cucumis melo OX=3656 GN=LOC107990564 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 1.9e-49 Identity = 118/223 (52.91%), Postives = 149/223 (66.82%), Query Frame = 0
BLAST of CSPI04G01210 vs. NCBI nr
Match: KGN52856.2 (hypothetical protein Csa_014722 [Cucumis sativus]) HSP 1 Score: 377.1 bits (967), Expect = 9.6e-101 Identity = 183/184 (99.46%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of CSPI04G01210 vs. NCBI nr
Match: XP_016901482.1 (PREDICTED: uncharacterized protein LOC107991269 [Cucumis melo] >KAA0044413.1 E3 ubiquitin-protein ligase RNF181-like protein [Cucumis melo var. makuwa] >TYK29540.1 E3 ubiquitin-protein ligase RNF181-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 325.9 bits (834), Expect = 2.5e-85 Identity = 168/221 (76.02%), Postives = 179/221 (81.00%), Query Frame = 0
BLAST of CSPI04G01210 vs. NCBI nr
Match: XP_038883574.1 (E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida]) HSP 1 Score: 223.8 bits (569), Expect = 1.4e-54 Identity = 127/226 (56.19%), Postives = 148/226 (65.49%), Query Frame = 0
BLAST of CSPI04G01210 vs. NCBI nr
Match: XP_016899530.1 (PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis melo] >KAA0035774.1 E3 ubiquitin-protein ligase RNF181-like protein [Cucumis melo var. makuwa] >TYK29842.1 E3 ubiquitin-protein ligase RNF181-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 205.7 bits (522), Expect = 3.8e-49 Identity = 118/223 (52.91%), Postives = 149/223 (66.82%), Query Frame = 0
BLAST of CSPI04G01210 vs. NCBI nr
Match: XP_004144954.1 (uncharacterized protein LOC101214496 [Cucumis sativus] >KGN43349.1 hypothetical protein Csa_020356 [Cucumis sativus]) HSP 1 Score: 203.0 bits (515), Expect = 2.5e-48 Identity = 116/225 (51.56%), Postives = 153/225 (68.00%), Query Frame = 0
BLAST of CSPI04G01210 vs. TAIR 10
Match: AT5G37200.1 (RING/U-box superfamily protein ) HSP 1 Score: 64.7 bits (156), Expect = 9.8e-11 Identity = 26/63 (41.27%), Postives = 40/63 (63.49%), Query Frame = 0
BLAST of CSPI04G01210 vs. TAIR 10
Match: AT4G12190.1 (RING/U-box superfamily protein ) HSP 1 Score: 60.8 bits (146), Expect = 1.4e-09 Identity = 26/63 (41.27%), Postives = 38/63 (60.32%), Query Frame = 0
BLAST of CSPI04G01210 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein ) HSP 1 Score: 60.1 bits (144), Expect = 2.4e-09 Identity = 23/60 (38.33%), Postives = 38/60 (63.33%), Query Frame = 0
BLAST of CSPI04G01210 vs. TAIR 10
Match: AT1G35330.1 (RING/U-box superfamily protein ) HSP 1 Score: 59.3 bits (142), Expect = 4.1e-09 Identity = 21/48 (43.75%), Postives = 34/48 (70.83%), Query Frame = 0
BLAST of CSPI04G01210 vs. TAIR 10
Match: AT2G44330.1 (RING/U-box superfamily protein ) HSP 1 Score: 58.9 bits (141), Expect = 5.4e-09 Identity = 24/65 (36.92%), Postives = 35/65 (53.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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