Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTGGGTGGTGGAGGAAAGAGGTCCCGAGTGGAAGTATGGATGGACTGAGAGAAAAATGTCTTCCATGTCTCTCCCGCCTATGCCGCTGCTCGCATTCCTCGGCGTCGTCGTTCTTTTGCTTTCTTTGCAGTCTCAGCAGATGGTGTTGGACTTCAAGCTATTACTTTTGGCTTTGCCATTTTTGATGATCTTTGTTGCAAATTCTGTAGCTGTGTCTGGTACAGTTGGTTCTGCTTCCATGAGAACTAAGAGCAGGTCGGCTCAGGAGGCCGAGAGGACCTCACCTTGGGGCGCCGCGGTGTTGCTGTTTCTGCTGCTGATATTGCTGTGGAACCGTCCTTACTTTAGGTCCAAGTGGTCACCTCCGTCGTAA
mRNA sequence
ATGAGTTGGGTGGTGGAGGAAAGAGGTCCCGAGTGGAAGTATGGATGGACTGAGAGAAAAATGTCTTCCATGTCTCTCCCGCCTATGCCGCTGCTCGCATTCCTCGGCGTCGTCGTTCTTTTGCTTTCTTTGCAGTCTCAGCAGATGGTGTTGGACTTCAAGCTATTACTTTTGGCTTTGCCATTTTTGATGATCTTTGTTGCAAATTCTGTAGCTGTGTCTGGTACAGTTGGTTCTGCTTCCATGAGAACTAAGAGCAGGTCGGCTCAGGAGGCCGAGAGGACCTCACCTTGGGGCGCCGCGGTGTTGCTGTTTCTGCTGCTGATATTGCTGTGGAACCGTCCTTACTTTAGGTCCAAGTGGTCACCTCCGTCGTAA
Coding sequence (CDS)
ATGAGTTGGGTGGTGGAGGAAAGAGGTCCCGAGTGGAAGTATGGATGGACTGAGAGAAAAATGTCTTCCATGTCTCTCCCGCCTATGCCGCTGCTCGCATTCCTCGGCGTCGTCGTTCTTTTGCTTTCTTTGCAGTCTCAGCAGATGGTGTTGGACTTCAAGCTATTACTTTTGGCTTTGCCATTTTTGATGATCTTTGTTGCAAATTCTGTAGCTGTGTCTGGTACAGTTGGTTCTGCTTCCATGAGAACTAAGAGCAGGTCGGCTCAGGAGGCCGAGAGGACCTCACCTTGGGGCGCCGCGGTGTTGCTGTTTCTGCTGCTGATATTGCTGTGGAACCGTCCTTACTTTAGGTCCAAGTGGTCACCTCCGTCGTAA
Protein sequence
MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLALPFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSKWSPPS*
Homology
BLAST of CSPI03G43440 vs. ExPASy TrEMBL
Match:
A0A0A0LE80 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872200 PE=4 SV=1)
HSP 1 Score: 243.0 bits (619), Expect = 6.5e-61
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0
Query: 1 MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL
Sbjct: 1 MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
Query: 61 PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120
PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK
Sbjct: 61 PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120
Query: 121 WSPPS 126
WSPPS
Sbjct: 121 WSPPS 125
BLAST of CSPI03G43440 vs. ExPASy TrEMBL
Match:
A0A5A7V8G0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001100 PE=4 SV=1)
HSP 1 Score: 237.3 bits (604), Expect = 3.6e-59
Identity = 121/125 (96.80%), Postives = 124/125 (99.20%), Query Frame = 0
Query: 1 MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
MSWVVEERGPEWKYGWTERKM+SMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL
Sbjct: 1 MSWVVEERGPEWKYGWTERKMASMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
Query: 61 PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120
PFL+IF ANSVAVSGTVGSA+MRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK
Sbjct: 61 PFLIIFFANSVAVSGTVGSAAMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120
Query: 121 WSPPS 126
WSPPS
Sbjct: 121 WSPPS 125
BLAST of CSPI03G43440 vs. ExPASy TrEMBL
Match:
A0A5D3E6P1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G008040 PE=4 SV=1)
HSP 1 Score: 235.7 bits (600), Expect = 1.0e-58
Identity = 120/125 (96.00%), Postives = 123/125 (98.40%), Query Frame = 0
Query: 1 MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
MSWVVEERGPEWKYGWTERKM+SMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL
Sbjct: 1 MSWVVEERGPEWKYGWTERKMASMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
Query: 61 PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120
PF +IF ANSVAVSGTVGSA+MRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK
Sbjct: 61 PFFIIFFANSVAVSGTVGSAAMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120
Query: 121 WSPPS 126
WSPPS
Sbjct: 121 WSPPS 125
BLAST of CSPI03G43440 vs. ExPASy TrEMBL
Match:
A0A6J1FL09 (uncharacterized protein LOC111446211 OS=Cucurbita moschata OX=3662 GN=LOC111446211 PE=4 SV=1)
HSP 1 Score: 179.9 bits (455), Expect = 6.8e-42
Identity = 92/114 (80.70%), Postives = 103/114 (90.35%), Query Frame = 0
Query: 1 MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
MSW EER PEWKYGW ER ++SMS PPMPLLAFLGVV+LLLSLQSQ+M LDFKL LLAL
Sbjct: 1 MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLAL 60
Query: 61 PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNR 115
PFL+IF+ANS+ VSG+V S +MRTK+RSAQEAE+TSPWGAAVLLFLLLILLWNR
Sbjct: 61 PFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGAAVLLFLLLILLWNR 114
BLAST of CSPI03G43440 vs. ExPASy TrEMBL
Match:
A0A7J6HIN4 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_002708 PE=4 SV=1)
HSP 1 Score: 110.5 bits (275), Expect = 5.0e-21
Identity = 65/135 (48.15%), Postives = 83/135 (61.48%), Query Frame = 0
Query: 1 MSWVVEE-RGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQS--------QQMVL 60
M W V E WK GWTER ++S+S PP+PLLA +G+VV+LLS+ S Q +
Sbjct: 1 MGWFVREGSSSSWKVGWTERTLASLSFPPLPLLAIVGIVVVLLSVSSYANYRSHMHQTKI 60
Query: 61 DFKLLLLALPFLMIFVANSVAVSGTVGSASMRTKSRSAQEA--ERTSPWGAAVLLFLLLI 120
FK+ LL LP L+I +ANSVA GTV S RTK + E SPWG A+LL LL++
Sbjct: 61 AFKIFLLFLPLLLILLANSVAKYGTVLVISPRTKREYSSEGGKNNNSPWGVAMLLVLLML 120
Query: 121 LLWNRPYFRSKWSPP 125
L+ + YF SKW PP
Sbjct: 121 LISYKSYFHSKWWPP 135
BLAST of CSPI03G43440 vs. NCBI nr
Match:
KGN60038.1 (hypothetical protein Csa_001668 [Cucumis sativus])
HSP 1 Score: 243.0 bits (619), Expect = 1.3e-60
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0
Query: 1 MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL
Sbjct: 1 MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
Query: 61 PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120
PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK
Sbjct: 61 PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120
Query: 121 WSPPS 126
WSPPS
Sbjct: 121 WSPPS 125
BLAST of CSPI03G43440 vs. NCBI nr
Match:
KAA0063287.1 (hypothetical protein E6C27_scaffold205G001100 [Cucumis melo var. makuwa])
HSP 1 Score: 237.3 bits (604), Expect = 7.4e-59
Identity = 121/125 (96.80%), Postives = 124/125 (99.20%), Query Frame = 0
Query: 1 MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
MSWVVEERGPEWKYGWTERKM+SMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL
Sbjct: 1 MSWVVEERGPEWKYGWTERKMASMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
Query: 61 PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120
PFL+IF ANSVAVSGTVGSA+MRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK
Sbjct: 61 PFLIIFFANSVAVSGTVGSAAMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120
Query: 121 WSPPS 126
WSPPS
Sbjct: 121 WSPPS 125
BLAST of CSPI03G43440 vs. NCBI nr
Match:
TYK31488.1 (hypothetical protein E5676_scaffold455G008040 [Cucumis melo var. makuwa])
HSP 1 Score: 235.7 bits (600), Expect = 2.1e-58
Identity = 120/125 (96.00%), Postives = 123/125 (98.40%), Query Frame = 0
Query: 1 MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
MSWVVEERGPEWKYGWTERKM+SMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL
Sbjct: 1 MSWVVEERGPEWKYGWTERKMASMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
Query: 61 PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120
PF +IF ANSVAVSGTVGSA+MRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK
Sbjct: 61 PFFIIFFANSVAVSGTVGSAAMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120
Query: 121 WSPPS 126
WSPPS
Sbjct: 121 WSPPS 125
BLAST of CSPI03G43440 vs. NCBI nr
Match:
XP_022940699.1 (uncharacterized protein LOC111446211 [Cucurbita moschata])
HSP 1 Score: 179.9 bits (455), Expect = 1.4e-41
Identity = 92/114 (80.70%), Postives = 103/114 (90.35%), Query Frame = 0
Query: 1 MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
MSW EER PEWKYGW ER ++SMS PPMPLLAFLGVV+LLLSLQSQ+M LDFKL LLAL
Sbjct: 1 MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLAL 60
Query: 61 PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNR 115
PFL+IF+ANS+ VSG+V S +MRTK+RSAQEAE+TSPWGAAVLLFLLLILLWNR
Sbjct: 61 PFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGAAVLLFLLLILLWNR 114
BLAST of CSPI03G43440 vs. NCBI nr
Match:
KAG7037914.1 (hypothetical protein SDJN02_01545, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 178.3 bits (451), Expect = 4.1e-41
Identity = 91/114 (79.82%), Postives = 102/114 (89.47%), Query Frame = 0
Query: 1 MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
MSW EER PEWKYGW ER ++SMS PPMPLLAFLGVV+LLLSLQSQ+M DFKL LLAL
Sbjct: 1 MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLAL 60
Query: 61 PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNR 115
PFL+IF+ANS+ VSG+V S +MRTK+RSAQEAE+TSPWGAAVLLFLLLILLWNR
Sbjct: 61 PFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGAAVLLFLLLILLWNR 114
BLAST of CSPI03G43440 vs. TAIR 10
Match:
AT5G42146.1 (unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 75.1 bits (183), Expect = 4.5e-14
Identity = 48/135 (35.56%), Postives = 70/135 (51.85%), Query Frame = 0
Query: 1 MSWVVEE-RGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQS--------QQMVL 60
M W ++E RG WK GW E + + S PP+ LLA L ++ LLL L S ++
Sbjct: 1 MGWFIKERRGGSWKRGWLEETLLTSSAPPLTLLALLAIISLLLFLSSYPRYKYEVEKTAA 60
Query: 61 DFKLLLLALPFLMIFVANSVAVSGTV---GSASMRTKSRSAQEAERTSPWGAAVLLFLLL 120
+ KL +L LP L +FV S++ + S S+R + E PWG ++L LLL
Sbjct: 61 NLKLFMLFLPILFVFVLVSLSFVHRLLFKSSYSVRANQAKSLFGEGNFPWGVLLMLILLL 120
Query: 121 ILLWNRPYFRSKWSP 124
+L+ + YF S W P
Sbjct: 121 LLVSKQSYFHSLWYP 135
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LE80 | 6.5e-61 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872200 PE=4 SV=1 | [more] |
A0A5A7V8G0 | 3.6e-59 | 96.80 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3E6P1 | 1.0e-58 | 96.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1FL09 | 6.8e-42 | 80.70 | uncharacterized protein LOC111446211 OS=Cucurbita moschata OX=3662 GN=LOC1114462... | [more] |
A0A7J6HIN4 | 5.0e-21 | 48.15 | Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_002708 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KGN60038.1 | 1.3e-60 | 100.00 | hypothetical protein Csa_001668 [Cucumis sativus] | [more] |
KAA0063287.1 | 7.4e-59 | 96.80 | hypothetical protein E6C27_scaffold205G001100 [Cucumis melo var. makuwa] | [more] |
TYK31488.1 | 2.1e-58 | 96.00 | hypothetical protein E5676_scaffold455G008040 [Cucumis melo var. makuwa] | [more] |
XP_022940699.1 | 1.4e-41 | 80.70 | uncharacterized protein LOC111446211 [Cucurbita moschata] | [more] |
KAG7037914.1 | 4.1e-41 | 79.82 | hypothetical protein SDJN02_01545, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
AT5G42146.1 | 4.5e-14 | 35.56 | unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bac... | [more] |