CSPI03G43440 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G43440
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Transmembrane protein
Location	Chr3: 37314366 .. 37314743 (-)
RNA-Seq Expression	CSPI03G43440
Synteny	CSPI03G43440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTGGGTGGTGGAGGAAAGAGGTCCCGAGTGGAAGTATGGATGGACTGAGAGAAAAATGTCTTCCATGTCTCTCCCGCCTATGCCGCTGCTCGCATTCCTCGGCGTCGTCGTTCTTTTGCTTTCTTTGCAGTCTCAGCAGATGGTGTTGGACTTCAAGCTATTACTTTTGGCTTTGCCATTTTTGATGATCTTTGTTGCAAATTCTGTAGCTGTGTCTGGTACAGTTGGTTCTGCTTCCATGAGAACTAAGAGCAGGTCGGCTCAGGAGGCCGAGAGGACCTCACCTTGGGGCGCCGCGGTGTTGCTGTTTCTGCTGCTGATATTGCTGTGGAACCGTCCTTACTTTAGGTCCAAGTGGTCACCTCCGTCGTAA

mRNA sequence

ATGAGTTGGGTGGTGGAGGAAAGAGGTCCCGAGTGGAAGTATGGATGGACTGAGAGAAAAATGTCTTCCATGTCTCTCCCGCCTATGCCGCTGCTCGCATTCCTCGGCGTCGTCGTTCTTTTGCTTTCTTTGCAGTCTCAGCAGATGGTGTTGGACTTCAAGCTATTACTTTTGGCTTTGCCATTTTTGATGATCTTTGTTGCAAATTCTGTAGCTGTGTCTGGTACAGTTGGTTCTGCTTCCATGAGAACTAAGAGCAGGTCGGCTCAGGAGGCCGAGAGGACCTCACCTTGGGGCGCCGCGGTGTTGCTGTTTCTGCTGCTGATATTGCTGTGGAACCGTCCTTACTTTAGGTCCAAGTGGTCACCTCCGTCGTAA

Coding sequence (CDS)

ATGAGTTGGGTGGTGGAGGAAAGAGGTCCCGAGTGGAAGTATGGATGGACTGAGAGAAAAATGTCTTCCATGTCTCTCCCGCCTATGCCGCTGCTCGCATTCCTCGGCGTCGTCGTTCTTTTGCTTTCTTTGCAGTCTCAGCAGATGGTGTTGGACTTCAAGCTATTACTTTTGGCTTTGCCATTTTTGATGATCTTTGTTGCAAATTCTGTAGCTGTGTCTGGTACAGTTGGTTCTGCTTCCATGAGAACTAAGAGCAGGTCGGCTCAGGAGGCCGAGAGGACCTCACCTTGGGGCGCCGCGGTGTTGCTGTTTCTGCTGCTGATATTGCTGTGGAACCGTCCTTACTTTAGGTCCAAGTGGTCACCTCCGTCGTAA

Protein sequence

MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLALPFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSKWSPPS*

Homology

[Close]

BLAST of CSPI03G43440 vs. ExPASy TrEMBL
Match: A0A0A0LE80 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872200 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 6.5e-61
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
           MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL
Sbjct: 1   MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60

Query: 61  PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120
           PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK
Sbjct: 61  PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120

Query: 121 WSPPS 126
           WSPPS
Sbjct: 121 WSPPS 125

[Close]

BLAST of CSPI03G43440 vs. ExPASy TrEMBL
Match: A0A5A7V8G0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001100 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 3.6e-59
Identity = 121/125 (96.80%), Postives = 124/125 (99.20%), Query Frame = 0


Query: 1   MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
           MSWVVEERGPEWKYGWTERKM+SMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL
Sbjct: 1   MSWVVEERGPEWKYGWTERKMASMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60

Query: 61  PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120
           PFL+IF ANSVAVSGTVGSA+MRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK
Sbjct: 61  PFLIIFFANSVAVSGTVGSAAMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120

Query: 121 WSPPS 126
           WSPPS
Sbjct: 121 WSPPS 125

[Close]

BLAST of CSPI03G43440 vs. ExPASy TrEMBL
Match: A0A5D3E6P1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G008040 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.0e-58
Identity = 120/125 (96.00%), Postives = 123/125 (98.40%), Query Frame = 0


Query: 1   MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
           MSWVVEERGPEWKYGWTERKM+SMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL
Sbjct: 1   MSWVVEERGPEWKYGWTERKMASMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60

Query: 61  PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120
           PF +IF ANSVAVSGTVGSA+MRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK
Sbjct: 61  PFFIIFFANSVAVSGTVGSAAMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120

Query: 121 WSPPS 126
           WSPPS
Sbjct: 121 WSPPS 125

[Close]

BLAST of CSPI03G43440 vs. ExPASy TrEMBL
Match: A0A6J1FL09 (uncharacterized protein LOC111446211 OS=Cucurbita moschata OX=3662 GN=LOC111446211 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 6.8e-42
Identity = 92/114 (80.70%), Postives = 103/114 (90.35%), Query Frame = 0


Query: 1   MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
           MSW  EER PEWKYGW ER ++SMS PPMPLLAFLGVV+LLLSLQSQ+M LDFKL LLAL
Sbjct: 1   MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLAL 60

Query: 61  PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNR 115
           PFL+IF+ANS+ VSG+V S +MRTK+RSAQEAE+TSPWGAAVLLFLLLILLWNR
Sbjct: 61  PFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGAAVLLFLLLILLWNR 114

[Close]

BLAST of CSPI03G43440 vs. ExPASy TrEMBL
Match: A0A7J6HIN4 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_002708 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 5.0e-21
Identity = 65/135 (48.15%), Postives = 83/135 (61.48%), Query Frame = 0


Query: 1   MSWVVEE-RGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQS--------QQMVL 60
           M W V E     WK GWTER ++S+S PP+PLLA +G+VV+LLS+ S         Q  +
Sbjct: 1   MGWFVREGSSSSWKVGWTERTLASLSFPPLPLLAIVGIVVVLLSVSSYANYRSHMHQTKI 60

Query: 61  DFKLLLLALPFLMIFVANSVAVSGTVGSASMRTKSRSAQEA--ERTSPWGAAVLLFLLLI 120
            FK+ LL LP L+I +ANSVA  GTV   S RTK   + E      SPWG A+LL LL++
Sbjct: 61  AFKIFLLFLPLLLILLANSVAKYGTVLVISPRTKREYSSEGGKNNNSPWGVAMLLVLLML 120

Query: 121 LLWNRPYFRSKWSPP 125
           L+  + YF SKW PP
Sbjct: 121 LISYKSYFHSKWWPP 135

[Close]

BLAST of CSPI03G43440 vs. NCBI nr
Match: KGN60038.1 (hypothetical protein Csa_001668 [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 1.3e-60
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
           MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL
Sbjct: 1   MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60

Query: 61  PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120
           PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK
Sbjct: 61  PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120

Query: 121 WSPPS 126
           WSPPS
Sbjct: 121 WSPPS 125

[Close]

BLAST of CSPI03G43440 vs. NCBI nr
Match: KAA0063287.1 (hypothetical protein E6C27_scaffold205G001100 [Cucumis melo var. makuwa])

HSP 1 Score: 237.3 bits (604), Expect = 7.4e-59
Identity = 121/125 (96.80%), Postives = 124/125 (99.20%), Query Frame = 0


Query: 1   MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
           MSWVVEERGPEWKYGWTERKM+SMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL
Sbjct: 1   MSWVVEERGPEWKYGWTERKMASMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60

Query: 61  PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120
           PFL+IF ANSVAVSGTVGSA+MRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK
Sbjct: 61  PFLIIFFANSVAVSGTVGSAAMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120

Query: 121 WSPPS 126
           WSPPS
Sbjct: 121 WSPPS 125

[Close]

BLAST of CSPI03G43440 vs. NCBI nr
Match: TYK31488.1 (hypothetical protein E5676_scaffold455G008040 [Cucumis melo var. makuwa])

HSP 1 Score: 235.7 bits (600), Expect = 2.1e-58
Identity = 120/125 (96.00%), Postives = 123/125 (98.40%), Query Frame = 0


Query: 1   MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
           MSWVVEERGPEWKYGWTERKM+SMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL
Sbjct: 1   MSWVVEERGPEWKYGWTERKMASMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60

Query: 61  PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120
           PF +IF ANSVAVSGTVGSA+MRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK
Sbjct: 61  PFFIIFFANSVAVSGTVGSAAMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120

Query: 121 WSPPS 126
           WSPPS
Sbjct: 121 WSPPS 125

[Close]

BLAST of CSPI03G43440 vs. NCBI nr
Match: XP_022940699.1 (uncharacterized protein LOC111446211 [Cucurbita moschata])

HSP 1 Score: 179.9 bits (455), Expect = 1.4e-41
Identity = 92/114 (80.70%), Postives = 103/114 (90.35%), Query Frame = 0


Query: 1   MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
           MSW  EER PEWKYGW ER ++SMS PPMPLLAFLGVV+LLLSLQSQ+M LDFKL LLAL
Sbjct: 1   MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLAL 60

Query: 61  PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNR 115
           PFL+IF+ANS+ VSG+V S +MRTK+RSAQEAE+TSPWGAAVLLFLLLILLWNR
Sbjct: 61  PFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGAAVLLFLLLILLWNR 114

[Close]

BLAST of CSPI03G43440 vs. NCBI nr
Match: KAG7037914.1 (hypothetical protein SDJN02_01545, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 178.3 bits (451), Expect = 4.1e-41
Identity = 91/114 (79.82%), Postives = 102/114 (89.47%), Query Frame = 0


Query: 1   MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
           MSW  EER PEWKYGW ER ++SMS PPMPLLAFLGVV+LLLSLQSQ+M  DFKL LLAL
Sbjct: 1   MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLAL 60

Query: 61  PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNR 115
           PFL+IF+ANS+ VSG+V S +MRTK+RSAQEAE+TSPWGAAVLLFLLLILLWNR
Sbjct: 61  PFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGAAVLLFLLLILLWNR 114

[Close]

BLAST of CSPI03G43440 vs. TAIR 10
Match: AT5G42146.1 (unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 75.1 bits (183), Expect = 4.5e-14
Identity = 48/135 (35.56%), Postives = 70/135 (51.85%), Query Frame = 0


Query: 1   MSWVVEE-RGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQS--------QQMVL 60
           M W ++E RG  WK GW E  + + S PP+ LLA L ++ LLL L S        ++   
Sbjct: 1   MGWFIKERRGGSWKRGWLEETLLTSSAPPLTLLALLAIISLLLFLSSYPRYKYEVEKTAA 60

Query: 61  DFKLLLLALPFLMIFVANSVAVSGTV---GSASMRTKSRSAQEAERTSPWGAAVLLFLLL 120
           + KL +L LP L +FV  S++    +    S S+R     +   E   PWG  ++L LLL
Sbjct: 61  NLKLFMLFLPILFVFVLVSLSFVHRLLFKSSYSVRANQAKSLFGEGNFPWGVLLMLILLL 120

Query: 121 ILLWNRPYFRSKWSP 124
           +L+  + YF S W P
Sbjct: 121 LLVSKQSYFHSLWYP 135

The following BLAST results are available for this feature:

BLAST of CSPI03G43440 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G43440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LE80	6.5e-61	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872200 PE=4 SV=1	[more]
A0A5A7V8G0	3.6e-59	96.80	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3E6P1	1.0e-58	96.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1FL09	6.8e-42	80.70	uncharacterized protein LOC111446211 OS=Cucurbita moschata OX=3662 GN=LOC1114462...	[more]
A0A7J6HIN4	5.0e-21	48.15	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_002708 PE=4 SV=1	[more]

BLAST of CSPI03G43440 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60038.1	1.3e-60	100.00	hypothetical protein Csa_001668 [Cucumis sativus]	[more]
KAA0063287.1	7.4e-59	96.80	hypothetical protein E6C27_scaffold205G001100 [Cucumis melo var. makuwa]	[more]
TYK31488.1	2.1e-58	96.00	hypothetical protein E5676_scaffold455G008040 [Cucumis melo var. makuwa]	[more]
XP_022940699.1	1.4e-41	80.70	uncharacterized protein LOC111446211 [Cucurbita moschata]	[more]
KAG7037914.1	4.1e-41	79.82	hypothetical protein SDJN02_01545, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CSPI03G43440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42146.1	4.5e-14	35.56	unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33306:SF26	PROTEIN, PUTATIVE-RELATED	coord: 1..124
None	No IPR available	PANTHER	PTHR33306	EXPRESSED PROTEIN-RELATED-RELATED	coord: 1..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G43440.1	CSPI03G43440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane