CSPI03G31440 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G31440
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 28452619 .. 28452984 (-)
RNA-Seq ExpressionCSPI03G31440
SyntenyCSPI03G31440
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGTAGGGTTGATTACGCGCGTGAATAGCTTTAGAAGCGTGGAGAGTTGTATTGGCTATGGCTGGGTTGGAGTTGGGTCGAGCCGGATTTATATTTGTAAAAACAAATATTTTGGTCGTTGTGGCTATGATTTCGGAGATGGGCCTCGCCCAGAAACTGCCGGCTCATTCGGCGCTCTAATTGATGGAAATCCCGTTTGTATCTTTTTTCTTTCACTCTCTTCTTCGGTCCGTGGTATTCATTTTCCTTCAAACCCAATATGGAGGGTGTGGTTCACGCCGATGGTTGAGAGTGTCATTCACGTGGTTATGTTCAGTGGAGACGTGGGGTCGGTGGGAGTTTGCGGACAATATTCCAACTAA

mRNA sequence

ATGGGTGTAGGGTTGATTACGCGCGTGAATAGCTTTAGAAGCGTGGAGAGTTGTATTGGCTATGGCTGGGTTGGAGTTGGGTCGAGCCGGATTTATATTTGTAAAAACAAATATTTTGGTCGTTGTGGCTATGATTTCGGAGATGGGCCTCGCCCAGAAACTGCCGGCTCATTCGGCGCTCTAATTGATGGAAATCCCGTTTGTATCTTTTTTCTTTCACTCTCTTCTTCGGTCCGTGGTATTCATTTTCCTTCAAACCCAATATGGAGGGTGTGGTTCACGCCGATGGTTGAGAGTGTCATTCACGTGGTTATGTTCAGTGGAGACGTGGGGTCGGTGGGAGTTTGCGGACAATATTCCAACTAA

Coding sequence (CDS)

ATGGGTGTAGGGTTGATTACGCGCGTGAATAGCTTTAGAAGCGTGGAGAGTTGTATTGGCTATGGCTGGGTTGGAGTTGGGTCGAGCCGGATTTATATTTGTAAAAACAAATATTTTGGTCGTTGTGGCTATGATTTCGGAGATGGGCCTCGCCCAGAAACTGCCGGCTCATTCGGCGCTCTAATTGATGGAAATCCCGTTTGTATCTTTTTTCTTTCACTCTCTTCTTCGGTCCGTGGTATTCATTTTCCTTCAAACCCAATATGGAGGGTGTGGTTCACGCCGATGGTTGAGAGTGTCATTCACGTGGTTATGTTCAGTGGAGACGTGGGGTCGGTGGGAGTTTGCGGACAATATTCCAACTAA

Protein sequence

MGVGLITRVNSFRSVESCIGYGWVGVGSSRIYICKNKYFGRCGYDFGDGPRPETAGSFGALIDGNPVCIFFLSLSSSVRGIHFPSNPIWRVWFTPMVESVIHVVMFSGDVGSVGVCGQYSN*
Homology
[Close]
BLAST of CSPI03G31440 vs. ExPASy TrEMBL
Match: A0A0A0LCV2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G731890 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 6.8e-31
Identity = 66/71 (92.96%), Postives = 66/71 (92.96%), Query Frame = 0 

Query: 1  MGVGLITRVNSFRSVESCIGYGWVGVGSSRIYICKNKYFGRCGYDFGDGPRPETAGSFGA 60
          MGVGLITRVNSFRSVESCIGYGWVGVGSSRI ICKNKYFGRCGYDFGDGPRPETAGSFG 
Sbjct: 1  MGVGLITRVNSFRSVESCIGYGWVGVGSSRICICKNKYFGRCGYDFGDGPRPETAGSFGT 60

Query: 61 LIDGNPVCIFF 72
          LIDGN V  FF
Sbjct: 61 LIDGNSVVSFF 71

[Close]
BLAST of CSPI03G31440 vs. NCBI nr
Match: KGN58779.1 (hypothetical protein Csa_000887 [Cucumis sativus])

HSP 1 Score: 143.3 bits (360), Expect = 1.4e-30
Identity = 66/71 (92.96%), Postives = 66/71 (92.96%), Query Frame = 0 

Query: 1  MGVGLITRVNSFRSVESCIGYGWVGVGSSRIYICKNKYFGRCGYDFGDGPRPETAGSFGA 60
          MGVGLITRVNSFRSVESCIGYGWVGVGSSRI ICKNKYFGRCGYDFGDGPRPETAGSFG 
Sbjct: 1  MGVGLITRVNSFRSVESCIGYGWVGVGSSRICICKNKYFGRCGYDFGDGPRPETAGSFGT 60

Query: 61 LIDGNPVCIFF 72
          LIDGN V  FF
Sbjct: 61 LIDGNSVVSFF 71

The following BLAST results are available for this feature:
BLAST of CSPI03G31440 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G31440 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCV26.8e-3192.96Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G731890 PE=4 SV=1[more]
BLAST of CSPI03G31440 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58779.11.4e-3092.96hypothetical protein Csa_000887 [Cucumis sativus][more]
BLAST of CSPI03G31440 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G31440.1CSPI03G31440.1mRNA