CSPI03G28940 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G28940
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	leucine-rich repeat extensin-like protein 3
Location	Chr3: 26475195 .. 26476793 (-)
RNA-Seq Expression	CSPI03G28940
Synteny	CSPI03G28940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTTGAAAATTTCTTCTTCTTCTTATTATATCTTACAACAAAGCTCAGATCATCACTGTGACTCAGTCAATCTCACATTTGACTCAGTTTCCTCATCCTTCTTCTTCTCTTTCTTTCTCAGCCATCAATTTCCACCCCCTCCATTTCCTCCTCCTTCTTATGCTCTTCTTTTTCCCCTTCACCAAACCCTCACATTGAGGAAGCCCCAGATTCCGAGGCCATCCCAATGTCCTCTGCAGATTTCTTCTTCTTTTTTCATTTCTAATCTCTTCTTCTGCGGATTTTGATTTTGGGTTCTTTTTCTTCTCTTCCTTTTGTGGATGCGGAATTTGGGGCACATTATACTCGGGGTTTCTTTTTCCTTTTCTTCTTTTTTTGAGTTTTCTCAAACCCTAGCGTTTTCAATCTGGTTCTGAATCTTCGTGGGTGTTGACGATTTCTATTTGGATTTTGAGGCTTCGAAAGGGGAATTTGAGCCTTTGGGAACCGACCCTTTTGGGAGAAACGTCGGCTATTGTTTCATTTCAATCACAGGGTTGGGTTGTTCCCTGTTTTGGTTAAAGCCCAGATGCGAGGAAGGTCCGGGGATTTTGAAAGTGAATCCTGATTTTCTTTGATTACTGTTTTTTTTCAATGCAATGGAACGGCCATTGACCACATTGATCTTCGTGATTACGGGGTTTGCTTTCAGTGTTTTGTCGCTTCTTGTCGAGTCTCAGACTCCAGATGGAGCCAATCCCACTCTCTCGCCGCCGAGACCTTCTTCACCGCCTCCCTCTCCCTCTCCGCCACCACCGCCGTTGCCACCACCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCGTTGCCACCACCTCCCCCACCACCCCCGCCTCCGCCTCCAATCACCCCACCGCCTCCATCGCCATCTCCTCCCCCATTTTCCCCACCGCCTCCTCCTCCGCCGCATCGCCATCGTCGTAATCCACCGCCTCCTCTTGCATCCTCCGTGGAGAGAAAGAAAAAACGACCACCAGTCCCTCCGAAAAACATCAATACTAATCAAGGGTCGAAGCGAAGTCTCAACAAGGGGAAGAAAGTTGGGCTGTTCTTTGTAGGTATTGCCGCAGTCCTCCAAATCTGTGTGGTGGGTTTTTTGGTATTCAAGAGACGGCAGCTTCTAAGAGTCAAGGATCGATATGAAGGCTTTTCATGAAGCCGTTGGCATCTGTTTCCTTCTTCTTACAACAGAGCCGAGGACTGTAGAAGAATTCTTGAGGATATGGCGGCCATTGAGCTAACTGGCTTGTGTCGCCTGCTCCAGAAAAAGCCAACAATTTGGGTAAATTTTCGATTGTTGGATTGGGAGATTGACAAAGCTTGTTCTTGAGATTATAAGAGGCTGCTCATCAGGTGATAAACTGAACAGGCAGCAGGCGGATAGGAAGGACGAACATTCTTCTCTAGGGCTTTCCTCAGGTGTTGTGTAAAAACGGGTACATGATATTTGATTGAGCTTTTTCTCCTTGTGATTTTTGAATTCTTGTTCATTCTTTTGTCCAATTCTGATTATACAGTTTATTAATTCAAACCAGAAGAAATCGTCTTAAAATATCC

mRNA sequence

AATTTTGAAAATTTCTTCTTCTTCTTATTATATCTTACAACAAAGCTCAGATCATCACTGTGACTCAGTCAATCTCACATTTGACTCAGTTTCCTCATCCTTCTTCTTCTCTTTCTTTCTCAGCCATCAATTTCCACCCCCTCCATTTCCTCCTCCTTCTTATGCTCTTCTTTTTCCCCTTCACCAAACCCTCACATTGAGGAAGCCCCAGATTCCGAGGCCATCCCAATGTCCTCTGCAGATTTCTTCTTCTTTTTTCATTTCTAATCTCTTCTTCTGCGGATTTTGATTTTGGGTTCTTTTTCTTCTCTTCCTTTTGTGGATGCGGAATTTGGGGCACATTATACTCGGGGTTTCTTTTTCCTTTTCTTCTTTTTTTGAGTTTTCTCAAACCCTAGCGTTTTCAATCTGGTTCTGAATCTTCGTGGGTGTTGACGATTTCTATTTGGATTTTGAGGCTTCGAAAGGGGAATTTGAGCCTTTGGGAACCGACCCTTTTGGGAGAAACGTCGGCTATTGTTTCATTTCAATCACAGGGTTGGGTTGTTCCCTGTTTTGGTTAAAGCCCAGATGCGAGGAAGGTCCGGGGATTTTGAAAGTGAATCCTGATTTTCTTTGATTACTGTTTTTTTTCAATGCAATGGAACGGCCATTGACCACATTGATCTTCGTGATTACGGGGTTTGCTTTCAGTGTTTTGTCGCTTCTTGTCGAGTCTCAGACTCCAGATGGAGCCAATCCCACTCTCTCGCCGCCGAGACCTTCTTCACCGCCTCCCTCTCCCTCTCCGCCACCACCGCCGTTGCCACCACCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCGTTGCCACCACCTCCCCCACCACCCCCGCCTCCGCCTCCAATCACCCCACCGCCTCCATCGCCATCTCCTCCCCCATTTTCCCCACCGCCTCCTCCTCCGCCGCATCGCCATCGTCGTAATCCACCGCCTCCTCTTGCATCCTCCGTGGAGAGAAAGAAAAAACGACCACCAGTCCCTCCGAAAAACATCAATACTAATCAAGGGTCGAAGCGAAGTCTCAACAAGGGGAAGAAAGTTGGGCTGTTCTTTGTAGGTATTGCCGCAGTCCTCCAAATCTGTGTGGTGGGTTTTTTGGTATTCAAGAGACGGCAGCTTCTAAGAGTCAAGGATCGATATGAAGGCTTTTCATGAAGCCGTTGGCATCTGTTTCCTTCTTCTTACAACAGAGCCGAGGACTGTAGAAGAATTCTTGAGGATATGGCGGCCATTGAGCTAACTGGCTTGTGTCGCCTGCTCCAGAAAAAGCCAACAATTTGGGTAAATTTTCGATTGTTGGATTGGGAGATTGACAAAGCTTGTTCTTGAGATTATAAGAGGCTGCTCATCAGGTGATAAACTGAACAGGCAGCAGGCGGATAGGAAGGACGAACATTCTTCTCTAGGGCTTTCCTCAGGTGTTGTGTAAAAACGGGTACATGATATTTGATTGAGCTTTTTCTCCTTGTGATTTTTGAATTCTTGTTCATTCTTTTGTCCAATTCTGATTATACAGTTTATTAATTCAAACCAGAAGAAATCGTCTTAAAATATCC

Coding sequence (CDS)

ATGGAACGGCCATTGACCACATTGATCTTCGTGATTACGGGGTTTGCTTTCAGTGTTTTGTCGCTTCTTGTCGAGTCTCAGACTCCAGATGGAGCCAATCCCACTCTCTCGCCGCCGAGACCTTCTTCACCGCCTCCCTCTCCCTCTCCGCCACCACCGCCGTTGCCACCACCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCGTTGCCACCACCTCCCCCACCACCCCCGCCTCCGCCTCCAATCACCCCACCGCCTCCATCGCCATCTCCTCCCCCATTTTCCCCACCGCCTCCTCCTCCGCCGCATCGCCATCGTCGTAATCCACCGCCTCCTCTTGCATCCTCCGTGGAGAGAAAGAAAAAACGACCACCAGTCCCTCCGAAAAACATCAATACTAATCAAGGGTCGAAGCGAAGTCTCAACAAGGGGAAGAAAGTTGGGCTGTTCTTTGTAGGTATTGCCGCAGTCCTCCAAATCTGTGTGGTGGGTTTTTTGGTATTCAAGAGACGGCAGCTTCTAAGAGTCAAGGATCGATATGAAGGCTTTTCATGA

Protein sequence

MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPPPPPPPPPPPLPPPPPPPPPPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS*

Homology

[Close]

BLAST of CSPI03G28940 vs. ExPASy TrEMBL
Match: A0A0A0LC75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G651880 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 9.9e-66
Identity = 170/185 (91.89%), Postives = 170/185 (91.89%), Query Frame = 0


Query: 1   MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPP 60
           MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPS           
Sbjct: 1   MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPS----------- 60

Query: 61  PPPPPPPPPLPPPPPPPPPPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVER 120
               PPPPPLPPPPPPPPPPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVER
Sbjct: 61  ----PPPPPLPPPPPPPPPPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVER 120

Query: 121 KKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDR 180
           KKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDR
Sbjct: 121 KKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDR 170

Query: 181 YEGFS 186
           YEGFS
Sbjct: 181 YEGFS 170

[Close]

BLAST of CSPI03G28940 vs. ExPASy TrEMBL
Match: A0A1S3CKG6 (leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103501988 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 7.6e-58
Identity = 159/185 (85.95%), Postives = 162/185 (87.57%), Query Frame = 0


Query: 1   MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPP 60
           MERPLTTLIFVI+GFAFSVLSLLVESQTPD ANPTLSPP PS PPPSPS           
Sbjct: 1   MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTLSPPMPSPPPPSPS----------- 60

Query: 61  PPPPPPPPPLPPPPPPPPPPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVER 120
               PPPPPLPPPPPPPPPPP I  PPPSPSPPPFSP PPPPPHRHRR+PPPPLASS+ER
Sbjct: 61  ----PPPPPLPPPPPPPPPPPRIISPPPSPSPPPFSPSPPPPPHRHRRSPPPPLASSMER 120

Query: 121 KKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDR 180
           KKKRPPVPPKNINTNQ SKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDR
Sbjct: 121 KKKRPPVPPKNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDR 170

Query: 181 YEGFS 186
           YEGFS
Sbjct: 181 YEGFS 170

[Close]

BLAST of CSPI03G28940 vs. ExPASy TrEMBL
Match: A0A6J1G9A4 (leucine-rich repeat extensin-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111452141 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.9e-25
Identity = 127/193 (65.80%), Postives = 139/193 (72.02%), Query Frame = 0


Query: 1   MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPP 60
           MERP +TLIFVI+GFAFS+LSLLVESQ  DGA P+ SPP        P PPPP  PPP P
Sbjct: 1   MERPFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPP--------PPPPPPSPPPPSP 60

Query: 61  PPPPPPPPPLPPP--PPPPPPPPPITPPPP----SPSPPPFSPPPPPPPHRHRRNPPPPL 120
           PPPPPPPPPL PP  PPPP P P   PPPP    SP PP F PPP  P  +HR  PPPP 
Sbjct: 61  PPPPPPPPPLSPPQSPPPPSPSPNFVPPPPPASSSPPPPIFPPPPSLPSLQHRSTPPPPP 120

Query: 121 ASSVERKKKRPPVPPKNINTN--QGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRR 180
             +     K+PP   +N N++  +GSKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRR
Sbjct: 121 IPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRR 180

Query: 181 QLLRVKDRYEGFS 186
           QLLR KDRY+GFS
Sbjct: 181 QLLRFKDRYDGFS 185

[Close]

BLAST of CSPI03G28940 vs. ExPASy TrEMBL
Match: A0A6J1KAI1 (leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111493162 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.0e-22
Identity = 133/201 (66.17%), Postives = 145/201 (72.14%), Query Frame = 0


Query: 1   MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLS--PPRPSSPPPSPSPPPPPLPPP 60
           MERPL+T IFVI+GFAFS+LSLLVESQ  DGA  + S  PP PS PPPSP PPPPPL PP
Sbjct: 1   MERPLSTFIFVISGFAFSILSLLVESQARDGAISSSSPPPPPPSPPPPSPPPPPPPLSPP 60

Query: 61  PPPP--PPPPPPPLPPPPPPPP-----PPPPITPPPPSP----SPPPFSPPPPPPPH-RH 120
             PP  PP  PP  PP  PPPP     PPPPI  PPP P    SPPP  PPPP PP  +H
Sbjct: 61  QSPPLSPPQSPPQSPPLSPPPPSPNFVPPPPIFVPPPPPASPSSPPPIFPPPPSPPSLQH 120

Query: 121 RRNP-PPPLASSVERKKKRPPVPPKNINTN-QGSKRSLNKGKKVGLFFVGIAAVLQICVV 180
           R  P PPP+ +S +  KK P V   N + N +GSKRSLN GKKVGLFFVGIAAVLQICVV
Sbjct: 121 RSTPLPPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVV 180

Query: 181 GFLVFKRRQLLRVKDRYEGFS 186
           GFLVFKRRQLLR KD+Y+GFS
Sbjct: 181 GFLVFKRRQLLRFKDQYDGFS 201

[Close]

BLAST of CSPI03G28940 vs. ExPASy TrEMBL
Match: A0A5N6QK60 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_003533 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 7.4e-13
Identity = 111/195 (56.92%), Postives = 125/195 (64.10%), Query Frame = 0


Query: 1   MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPP 60
           ME PL TL+ +I GFA  +L+LL ESQ   G N        + PPPSP PPPPP PPPPP
Sbjct: 1   MEPPLPTLVSLIFGFAICILALLAESQPGSGVNIPAGSLLEAPPPPSPPPPPPPSPPPPP 60

Query: 61  PPPPP-PPPPLPPPPPPPPP--PPPITPPPPSPSPPPFSPPPP----PPPHRHRRNPPPP 120
           PPPPP PPPP PPPPPPP P  PPP +PPPP PSPP    PPP    PPP  H    PPP
Sbjct: 61  PPPPPTPPPPSPPPPPPPSPPLPPPPSPPPPPPSPPHSVSPPPHSGSPPPLAHHLGTPPP 120

Query: 121 LASS-------VERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGF 180
              S          +++ PP P         SK+ +N GKKVGLFFVGIAA+LQI VVGF
Sbjct: 121 HHRSNGQADNRYNHRREEPPFP--------HSKQGINTGKKVGLFFVGIAAILQIGVVGF 180

Query: 181 LVFKRRQLLRVKDRY 182
           LVFKRRQLL++KDRY
Sbjct: 181 LVFKRRQLLKLKDRY 187

[Close]

BLAST of CSPI03G28940 vs. NCBI nr
Match: XP_011651738.2 (LOW QUALITY PROTEIN: basic proline-rich protein [Cucumis sativus])

HSP 1 Score: 256.5 bits (654), Expect = 1.7e-64
Identity = 169/185 (91.35%), Postives = 169/185 (91.35%), Query Frame = 0


Query: 1   MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPP 60
           MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPS           
Sbjct: 1   MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPS----------- 60

Query: 61  PPPPPPPPPLPPPPPPPPPPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVER 120
               PPPPPLPPPPPPP PPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVER
Sbjct: 61  ----PPPPPLPPPPPPPXPPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVER 120

Query: 121 KKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDR 180
           KKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDR
Sbjct: 121 KKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDR 170

Query: 181 YEGFS 186
           YEGFS
Sbjct: 181 YEGFS 170

[Close]

BLAST of CSPI03G28940 vs. NCBI nr
Match: XP_008463997.1 (PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo])

HSP 1 Score: 233.4 bits (594), Expect = 1.6e-57
Identity = 159/185 (85.95%), Postives = 162/185 (87.57%), Query Frame = 0


Query: 1   MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPP 60
           MERPLTTLIFVI+GFAFSVLSLLVESQTPD ANPTLSPP PS PPPSPS           
Sbjct: 1   MERPLTTLIFVISGFAFSVLSLLVESQTPDEANPTLSPPMPSPPPPSPS----------- 60

Query: 61  PPPPPPPPPLPPPPPPPPPPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVER 120
               PPPPPLPPPPPPPPPPP I  PPPSPSPPPFSP PPPPPHRHRR+PPPPLASS+ER
Sbjct: 61  ----PPPPPLPPPPPPPPPPPRIISPPPSPSPPPFSPSPPPPPHRHRRSPPPPLASSMER 120

Query: 121 KKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDR 180
           KKKRPPVPPKNINTNQ SKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDR
Sbjct: 121 KKKRPPVPPKNINTNQASKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDR 170

Query: 181 YEGFS 186
           YEGFS
Sbjct: 181 YEGFS 170

[Close]

BLAST of CSPI03G28940 vs. NCBI nr
Match: XP_038900729.1 (proline-rich receptor-like protein kinase PERK2 [Benincasa hispida])

HSP 1 Score: 183.7 bits (465), Expect = 1.4e-42
Identity = 152/187 (81.28%), Postives = 154/187 (82.35%), Query Frame = 0


Query: 1   MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPP 60
           MERPLTTLIFVI+GFAFSVLSLLVESQT DGANPTLSPP PS PPPSP PPPPPL P PP
Sbjct: 1   MERPLTTLIFVISGFAFSVLSLLVESQTQDGANPTLSPPIPSPPPPSPPPPPPPLSPLPP 60

Query: 61  PPPPPPPPPLPPPPPPPPPPPPITPPPPSPSPPPFSPPPP-PPPHRHRRNPPPPLASSVE 120
           PPPPPPPPP+  PP          PPP SPSPPPFSPPPP P P   RR PPP  AS  E
Sbjct: 61  PPPPPPPPPILSPP----------PPPLSPSPPPFSPPPPFPSPLPPRRRPPPFHAS--E 120

Query: 121 RKKKRPPVPPKNI-NTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVK 180
             KK PPVPPKNI NTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVK
Sbjct: 121 NGKKSPPVPPKNINNTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVK 175

Query: 181 DRYEGFS 186
           DRYEGFS
Sbjct: 181 DRYEGFS 175

[Close]

BLAST of CSPI03G28940 vs. NCBI nr
Match: KAE8650907.1 (hypothetical protein Csa_002672, partial [Cucumis sativus])

HSP 1 Score: 178.7 bits (452), Expect = 4.6e-41
Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 0


Query: 75  PPPPPPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINT 134
           P  PPPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINT
Sbjct: 42  PTTPPPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINT 101

Query: 135 NQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS 186
           NQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Sbjct: 102 NQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS 152

[Close]

BLAST of CSPI03G28940 vs. NCBI nr
Match: XP_022948467.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita moschata])

HSP 1 Score: 125.2 bits (313), Expect = 6.0e-25
Identity = 127/193 (65.80%), Postives = 139/193 (72.02%), Query Frame = 0


Query: 1   MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPP 60
           MERP +TLIFVI+GFAFS+LSLLVESQ  DGA P+ SPP        P PPPP  PPP P
Sbjct: 1   MERPFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPP--------PPPPPPSPPPPSP 60

Query: 61  PPPPPPPPPLPPP--PPPPPPPPPITPPPP----SPSPPPFSPPPPPPPHRHRRNPPPPL 120
           PPPPPPPPPL PP  PPPP P P   PPPP    SP PP F PPP  P  +HR  PPPP 
Sbjct: 61  PPPPPPPPPLSPPQSPPPPSPSPNFVPPPPPASSSPPPPIFPPPPSLPSLQHRSTPPPPP 120

Query: 121 ASSVERKKKRPPVPPKNINTN--QGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRR 180
             +     K+PP   +N N++  +GSKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRR
Sbjct: 121 IPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRR 180

Query: 181 QLLRVKDRYEGFS 186
           QLLR KDRY+GFS
Sbjct: 181 QLLRFKDRYDGFS 185

The following BLAST results are available for this feature:

BLAST of CSPI03G28940 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G28940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC75	9.9e-66	91.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G651880 PE=4 SV=1	[more]
A0A1S3CKG6	7.6e-58	85.95	leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103501...	[more]
A0A6J1G9A4	2.9e-25	65.80	leucine-rich repeat extensin-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1KAI1	1.0e-22	66.17	leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A5N6QK60	7.4e-13	56.92	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_003533 PE=4 SV=1	[more]

BLAST of CSPI03G28940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651738.2	1.7e-64	91.35	LOW QUALITY PROTEIN: basic proline-rich protein [Cucumis sativus]	[more]
XP_008463997.1	1.6e-57	85.95	PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo]	[more]
XP_038900729.1	1.4e-42	81.28	proline-rich receptor-like protein kinase PERK2 [Benincasa hispida]	[more]
KAE8650907.1	4.6e-41	98.20	hypothetical protein Csa_002672, partial [Cucumis sativus]	[more]
XP_022948467.1	6.0e-25	65.80	leucine-rich repeat extensin-like protein 3 [Cucurbita moschata]	[more]

BLAST of CSPI03G28940 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 53..74 score: 50.0 coord: 39..51 score: 52.31 coord: 74..90 score: 50.59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..110
None	No IPR available	PANTHER	PTHR36721	PROLINE-RICH FAMILY PROTEIN	coord: 60..184
None	No IPR available	PANTHER	PTHR36721	PROLINE-RICH FAMILY PROTEIN	coord: 1..69
None	No IPR available	PANTHER	PTHR36721:SF1	PROLINE-RICH FAMILY PROTEIN	coord: 60..184 coord: 1..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G28940.1	CSPI03G28940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane