CSPI03G23900 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G23900
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Unknown protein
Location	Chr3: 21007603 .. 21010408 (-)
RNA-Seq Expression	CSPI03G23900
Synteny	CSPI03G23900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGGCAAGTATACACAGGCTAGTAGTAGAGCAAGGATTCAAATTGATAGATTTCTGACGTCCAATGGGTGGTTGGATGAATGTGATAGTGTTAGGATAGAGTTGGGCTGAGAGGTCACTTCGAACTACTTGCCTATTATCCTTGGTTTAGTACCTCATCGTTGGGGTCCTTGCAAGTCCATATTCCCCTAATGGTGGAATTTGGAAGTGCAAGATAATTGAGTTATTGAGAATGTTATGACCAAATGGGGAAATTTAGAGCCTTAAAGGGTTGTTAAGAAGTTAGGACAAGGAGGCTTTTGGGTGACAATTTTGGGCAAAATCAAGGCCATTGGTTCTCAGGAAGAGATTAGTAGTCTTTATGAGTTACTTAAGGAGGAAAGGCAAGCTCTTAAGGCGGAGTTCGTTGATTTGGTAAGGAAGGAACATAGTAGTCACAGCCAAAAGGCCAAGGTGAGATCAGCTAAAGAGTGAGATCGCAATAAGCTTTTTCCCACAAATTACAATCAAATGCCTTGCTTTCTTTGATAAATGAGTTGCTTAAGCCAAATGTTTATTACAATCAAACTCCTCTCCGATTTGCTGATGACTCTCTTCTTTTGTCCGAGTAAGGAAGAGTCTTTTTTAAATTTGAACCACATTCTCACTTTCTTTGAAGCCATGTTGTGTCTTAAAATTAGTAAAGGTAAAAGGCTAGATGATGAGTTTGATTAGTGACTTGGTCAAAGTGAGTAAATGGAATAAGTAGGTGGGGGTGTGAGATTGGAAATAACCCATGCAGAGTTCCTTTTGGATTCCCGTGGGGACCAAGTGTGAAAAAGATTGACCTGTTGGAAGATTTTTTTTCCTCTCCCTAAAGGTGGTAGGTTGACTTTAGTTCGACTAATGTTAAGCCGTATTCCTCTTTAACTTTCTCCCTTTCAAGAGCCCCTGGATCATTGTGTACATGCTTGCAAAAACTCATAAGGGCCTTTCTATGGGATGGTGTGGAGAAAGGTCTCTCTATGGGATGCTGTGGAGGAAGGTCTTTCTATGACATGTTGTGGAGGAAGGTCTAGGTGATTTGGTTAATTGAGAGGTTATTAGAAAGCCTGTTAACATGGGTGGGTTAGAGTTAGAGAACTTCAGGGCTCGAACCATAACATTATTGCCAAAATGGTTACGGTGTTTTCCCCTAATTCTTTGTCTCTTTGGTACATGATTATTGTGAGCAATTATGGTTCTAATTCCTTTAAATGAATGTTGGATGGGGTTAAAGGCACATTCAGAAACAATTGGAAATTCTTTTTTTTCTTTTAACCTAATTAATTCAGTGTATGGTGGGTGACGGAAAGAATATTTATTTTTGGGATGATAGGTGGATGGCAGATCCGCCTATGAGCAGGAGGTTCCTTAATCTTGATCACTTATTGACTATGAAAATATGTTGGATGGCTGATGTTCTTGTTTTTTTAGGCTCAATCCAGCTAAACGCTAAATCTAGTTGTATTTGCTTTATATTGTTTATTGTATTTCTTTGTACTTGCATTAGACTCTTCATTTCATCAATGAAAAACCTTGTTTTCTTTTTCGTTTTTTCGTGCCTTTGGAGGTAAAAAATGAAAATCCCCCCTTCGGCCCCCAAGAAAAAGGGAAAGTTCTTTGTTTGGCAAGTTATCCTTGTAAGTTTCAACACCTTGGATAGACTTTTATGGAAGATGCCTTCTTTGATTAGACCTTTTTGTTGCATCCTTTGTTGGTGGGTGCCAGAAGACTTGAATCATTTATTTTGAAATTGTGATTATGTTCAGTAGTGTCGGTCTAGAACTCTTCGTTTGATGTGTTTGGTCTTTAGATGGTCCATTATGGAGCTTTGAGTTTCTCCTCGATCTGCTGATTCAAGGGAAGGGAAATTTCTTTTGGGAAATTGGAGTGTGTGCTTTGTTTTAAGGGTTCAAGGGGAATTTGGAAGAGAATCTTTAGAGAGATTGAGAGAGTTTTGTGATATTTGGTCCCTGTGAGATTTTATGTTTGTAATTAGTGCGGATGATGACTTTTTTTGTTTTTCTAATTATTTGCTTGGTCTTATTCTTCTTGATTGGAGTCTCCTTCAGGGTTGCTCCCTTTTGTGGGCTGTGTTTTTCTGCATGCTTGTTAATTCTTTCATTTTTTTTTCAATGATAATTGGTCTTTTATTTAAAACTAAAACAAATTAAGTGTGTGGAGTGTTAAATTATTGATATAATTGCTTGGTTATTTACTAATTTAACAATCTTGTTCTCTCTCAAAAAGGCTAGAATTTTTGTAGCACATTTATTTCATTTATTGTCACCTTCCTAACATGCTGTAATGGCTAGTTCACATCACGATTATCTCATGTTTGTTCTACTTCAGTTCCAAAAATTTTCTTGTGATCCCATTCTCATTATACCCGTGAATAATGCTATTTCGCTAACGTCATTTTCTGAATGATTAGGGTTTCGGGCTCTTGAGGAACTTTACTATCAGACATGGTTGCACAGGTAACTCATGGATGTGGATTAATTTGTCTTTTTCTTCTTATATATACATATATATATACTCAACATGTGTTCTGTTCCAAGTTTCTCATGATTATGCTTAGTTTGCATTGTCTACATTTCTTGTCATGGAACCAAAAATATTGGGGAAATGGACTTTGTTCAATTTTCTAGGACTATTGTGCAAGTTGGTATGAGTAGGTTTTACAATTGCTTTGCTATGGATATGATTTTGCTTACCTGTCTATGTAGTGGACAAAGAGTTGTTGTACAGGAAAAGAAAGAAGATCAAGTCGTGGAAAATG

mRNA sequence

ATGAATGGCAAGTATACACAGGCTAGTAGTAGAGCAAGGATTCAAATTGATAGATTTCTGACGTCCAATGGGTGGTTGGATGAATGTGATAGTTACCTCATCGTTGGGGTCCTTGCAAGTCCATATTCCCCTAATGGAGGCTTTTGGGTGACAATTTTGGGCAAAATCAAGGCCATTGGTTCTCAGGAAGAGATTAGTAGTCTTTATGAGTTACTTAAGGAGGAAAGGCAAGCTCTTAAGGCGGAGTTCGTTGATTTGGTAAGGAAGGAACATAGTAGTCACAGCCAAAAGGCCAAGGTTGACTTTAGTTCGACTAATGTTAAGCCGTATTCCTCTTTAACTTTCTCCCTTTCAAGAGCCCCTGGATCATTGTGTACATGCTTGCAAAAACTCATAAGGGCCTTTCTATGGGATGGTGTGGAGAAAGGTCTCTCTATGGGATGCTGTGGAGGAAGAGTTAGAGAACTTCAGGGCTCGAACCATAACATTATTGCCAAAATGGTTACGGTGTTTTCCCCTAATTCTTTGTCTCTTTGGTACATGATTATTGTGGATGGCAGATCCGCCTATGAGCAGGAGGTAAAAAATGAAAATCCCCCCTTCGGCCCCCAAGAAAAAGGGAAAGTTCTTTGTTTGGCAAGTTATCCTTATGGTCCATTATGGAGCTTTGAGTTTCTCCTCGATCTGCTGATTCAAGGGAAGGGAAATTTCTTTTGGGAAATTGGAGGTTTCGGGCTCTTGAGGAACTTTACTATCAGACATGGTTGCACAGTGGACAAAGAGTTGTTGTACAGGAAAAGAAAGAAGATCAAGTCGTGGAAAATG

Coding sequence (CDS)

ATGAATGGCAAGTATACACAGGCTAGTAGTAGAGCAAGGATTCAAATTGATAGATTTCTGACGTCCAATGGGTGGTTGGATGAATGTGATAGTTACCTCATCGTTGGGGTCCTTGCAAGTCCATATTCCCCTAATGGAGGCTTTTGGGTGACAATTTTGGGCAAAATCAAGGCCATTGGTTCTCAGGAAGAGATTAGTAGTCTTTATGAGTTACTTAAGGAGGAAAGGCAAGCTCTTAAGGCGGAGTTCGTTGATTTGGTAAGGAAGGAACATAGTAGTCACAGCCAAAAGGCCAAGGTTGACTTTAGTTCGACTAATGTTAAGCCGTATTCCTCTTTAACTTTCTCCCTTTCAAGAGCCCCTGGATCATTGTGTACATGCTTGCAAAAACTCATAAGGGCCTTTCTATGGGATGGTGTGGAGAAAGGTCTCTCTATGGGATGCTGTGGAGGAAGAGTTAGAGAACTTCAGGGCTCGAACCATAACATTATTGCCAAAATGGTTACGGTGTTTTCCCCTAATTCTTTGTCTCTTTGGTACATGATTATTGTGGATGGCAGATCCGCCTATGAGCAGGAGGTAAAAAATGAAAATCCCCCCTTCGGCCCCCAAGAAAAAGGGAAAGTTCTTTGTTTGGCAAGTTATCCTTATGGTCCATTATGGAGCTTTGAGTTTCTCCTCGATCTGCTGATTCAAGGGAAGGGAAATTTCTTTTGGGAAATTGGAGGTTTCGGGCTCTTGAGGAACTTTACTATCAGACATGGTTGCACAGTGGACAAAGAGTTGTTGTACAGGAAAAGAAAGAAGATCAAGTCGTGGAAAATG

Protein sequence

MNGKYTQASSRARIQIDRFLTSNGWLDECDSYLIVGVLASPYSPNGGFWVTILGKIKAIGSQEEISSLYELLKEERQALKAEFVDLVRKEHSSHSQKAKVDFSSTNVKPYSSLTFSLSRAPGSLCTCLQKLIRAFLWDGVEKGLSMGCCGGRVRELQGSNHNIIAKMVTVFSPNSLSLWYMIIVDGRSAYEQEVKNENPPFGPQEKGKVLCLASYPYGPLWSFEFLLDLLIQGKGNFFWEIGGFGLLRNFTIRHGCTVDKELLYRKRKKIKSWKM

Homology

The following BLAST results are available for this feature:

BLAST of CSPI03G23900 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G23900 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G23900 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G23900 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 62..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G23900.1	CSPI03G23900.1	mRNA