Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAGAATCTGCTCTAAGCTCTTTGGAAAGAATCATGAGAAAGTTCTTTTGGAAAGGAAACAAGGTAGGAAAGCTAAACCACCTAGTAAAATGGGATGCTGTAATTAAATCCTACAAAGATGGAGGACTTAGTTTGGGCAAGTTGAAGCACAAGAATATGGCCCTATTGTCTAAGTGGGGATGGCGTTTCTCAAAAGAACAAAATTCACTTTGGTGTCAAGTGATCATAAGCATTCATGGAAGTAGTACTTTCAACTGGCATTCAAATGAAAAAGAAACCGTGAGTCTAAGAAGTCCTTGGATTAGCATATCAAGGCAATAGCGCAAAATTGACTCATTGGCTCTTTTCAAATTAGGTGATGGCAGCAAAATATTGTTTTGGAAGCACCCTTGGATGGACATTATCACTTTGGAGCGTAAATTTCCAAGATTGGTTAGGATCGCACTCAATCCAAATGGGTCTGTTTCAAATCATTGGGACTCTTCAACCAACTCTTGGTCCATCTATTTCAGAAGATCGCTAAATGATGAGGAAATTTTAGATTTTCGGACCTTGTTGAGTCAGATTTCTCCTTCACAGTCAGCCTCATTTCCAGATCAAAGGTTTTGGTCCCTTGAAACCTCAGGTTCCTTCTTGGTAAAATCACTGGTTAAGCATCTTTCGACATCTTCTCCATTGGAAAGTTTTTTGTACAAAAGGTTTTGGAAATCTAACAGTCCAAGAAGGATAAATATTTCCATATGGATTATGCTCTTCGAAAATTTAGACTGTGCCTCAGTACTTCAAAGAAAGCTTTCCTCCCATGCCCTCTCACCTTATGTCTGCCCCCTTTGTGTTAATAACATGGAAAACATCCGGCATATTTTATTTGATTGTGTCTTTGGTTTTAAATGTTGGGTCCACCTTCTCCAAGCATTCAATTTTTGTTGGGTTTTTTATCATGTTTTTAAGAACAATGTGTCTCAAATTCTTGCTGGTCCAGACTTGAAGAAGAAGACAGCGGAACTATAGTGGGCAAACGCAGTAAAAGCACTTTTAGCTGAAATTTGGTTTGAAAGAAACCAAAGAGTCTTCCATGATAACTCATTGACTTGGATGGAACGCTATGATTCTGCTCGTTTGAATGCATCTTCATGGTGCTTATTATCTAAATATTTTCAAGATTACTCTTCGCAGGAGATTGTTCTAAATTGGCCAGCCTTTATAGTCTCCCCACCTTGAAGTTCTAGATTATCATGTCTCCCGGATCAGCCTTCTACTTCAATATGTTTTTGCTCAATCAAGGACTCAGCTTGGTGCCTTGTGA
mRNA sequence
ATGCCAGAATCTGCTCTAAGCTCTTTGGAAAGAATCATGAGAAAGTTCTTTTGGAAAGGAAACAAGGTAGGAAAGCTAAACCACCTAGTAAAATGGGATGCTGTAATTAAATCCTACAAAGATGGAGGACTTAGTTTGGGCAAGTTGAAGCACAAGAATATGGCCCTATTGTCTAAGTGGGGATGGCGTTTCTCAAAAGAACAAAATTCACTTTGGTGTCAAGTGATCATAAGCATTCATGGAAGTAGTACTTTCAACTGGCATTCAAATGAAAAAGAAACCCACCCTTGGATGGACATTATCACTTTGGAGCGTAAATTTCCAAGATTGGTTAGGATCGCACTCAATCCAAATGGGTCTGTTTCAAATCATTGGGACTCTTCAACCAACTCTTGGTCCATCTATTTCAGAAGATCGCTAAATGATGAGGAAATTTTAGATTTTCGGACCTTGTTGAGTCAGATTTCTCCTTCACAGTCAGCCTCATTTCCAGATCAAAGGTTTTGGTCCCTTGAAACCTCAGGTTCCTTCTTGGTAAAATCACTGGTTAAGCATCTTTCGACATCTTCTCCATTGGAAAGTTTTTTGTACAAAAGGTTTTGGAAATCTAACAGTCCAAGAAGGATAAATATTTCCATATGGATTATGCTCTTCGAAAATTTAGACTGTGCCTCAGTACTTCAAAGAAAGCTTTCCTCCCATGCCCTCTCACCTTATGTCTGCCCCCTTTGTAACAATGTGTCTCAAATTCTTGCTGGTCCAGACTTGAAGAAGAAGACAGCGGAACTATACCTTCTACTTCAATATGTTTTTGCTCAATCAAGGACTCAGCTTGGTGCCTTGTGA
Coding sequence (CDS)
ATGCCAGAATCTGCTCTAAGCTCTTTGGAAAGAATCATGAGAAAGTTCTTTTGGAAAGGAAACAAGGTAGGAAAGCTAAACCACCTAGTAAAATGGGATGCTGTAATTAAATCCTACAAAGATGGAGGACTTAGTTTGGGCAAGTTGAAGCACAAGAATATGGCCCTATTGTCTAAGTGGGGATGGCGTTTCTCAAAAGAACAAAATTCACTTTGGTGTCAAGTGATCATAAGCATTCATGGAAGTAGTACTTTCAACTGGCATTCAAATGAAAAAGAAACCCACCCTTGGATGGACATTATCACTTTGGAGCGTAAATTTCCAAGATTGGTTAGGATCGCACTCAATCCAAATGGGTCTGTTTCAAATCATTGGGACTCTTCAACCAACTCTTGGTCCATCTATTTCAGAAGATCGCTAAATGATGAGGAAATTTTAGATTTTCGGACCTTGTTGAGTCAGATTTCTCCTTCACAGTCAGCCTCATTTCCAGATCAAAGGTTTTGGTCCCTTGAAACCTCAGGTTCCTTCTTGGTAAAATCACTGGTTAAGCATCTTTCGACATCTTCTCCATTGGAAAGTTTTTTGTACAAAAGGTTTTGGAAATCTAACAGTCCAAGAAGGATAAATATTTCCATATGGATTATGCTCTTCGAAAATTTAGACTGTGCCTCAGTACTTCAAAGAAAGCTTTCCTCCCATGCCCTCTCACCTTATGTCTGCCCCCTTTGTAACAATGTGTCTCAAATTCTTGCTGGTCCAGACTTGAAGAAGAAGACAGCGGAACTATACCTTCTACTTCAATATGTTTTTGCTCAATCAAGGACTCAGCTTGGTGCCTTGTGA
Protein sequence
MPESALSSLERIMRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIISIHGSSTFNWHSNEKETHPWMDIITLERKFPRLVRIALNPNGSVSNHWDSSTNSWSIYFRRSLNDEEILDFRTLLSQISPSQSASFPDQRFWSLETSGSFLVKSLVKHLSTSSPLESFLYKRFWKSNSPRRINISIWIMLFENLDCASVLQRKLSSHALSPYVCPLCNNVSQILAGPDLKKKTAELYLLLQYVFAQSRTQLGAL*
Homology
BLAST of CSPI03G23140 vs. ExPASy Swiss-Prot
Match:
P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)
HSP 1 Score: 72.0 bits (175), Expect = 1.2e-11
Identity = 33/76 (43.42%), Postives = 45/76 (59.21%), Query Frame = 0
Query: 1 MPESALSSLERIMRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKW 60
+P+S L+ L+++ R F W K HLVKW V K+GGL + K N AL+SK
Sbjct: 58 LPQSILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKV 117
Query: 61 GWRFSKEQNSLWCQVI 77
GWR +E+NSLW V+
Sbjct: 118 GWRLLQEKNSLWTLVL 133
BLAST of CSPI03G23140 vs. ExPASy TrEMBL
Match:
A0A5A7T2Y0 (zf-RVT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00100 PE=4 SV=1)
HSP 1 Score: 189.9 bits (481), Expect = 1.5e-44
Identity = 110/274 (40.15%), Postives = 149/274 (54.38%), Query Frame = 0
Query: 13 MRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLW 72
MR FF +G+ K+N LV W+ V KDGGL LG +K N ALL+KWGWR+SKE+++LW
Sbjct: 1 MRNFFREGHADSKINQLVNWNKVSSPPKDGGLGLGGIKIHNTALLAKWGWRYSKEESALW 60
Query: 73 CQVIISIHGSSTFNWHSNEKETH-----------------------------------PW 132
QVI SIHG F+W + K + PW
Sbjct: 61 RQVIRSIHGKEAFDWFTKGKSGNSLRSPWVNIARFWRLVDSLASFNLGNGLRIGFRIDPW 120
Query: 133 MDIITLERKFPRLVRIALNPNGSVSNHWDSSTNSWSIYFRRSLNDEEILDFRTLLSQISP 192
+ ++ +F RL RIAL P S SW + FRRSL DEEI +F++LL +S
Sbjct: 121 VGNTPIKEQFSRLFRIALWPRCSFLFF------SWPLAFRRSLEDEEITEFQSLLFLLST 180
Query: 193 SQSASFPDQRFWSLETSGSFLVKSLVKHLSTSSPLESFLYKRFWKSNSPRRINISIWIML 252
+ + D R WS+E+ G F KSL HL T+SP++ L+ +S SPRRINI IWIM+
Sbjct: 181 EKVVNSDDFRSWSIESHGRFSDKSLSTHLKTASPMDKRLFSAILQSGSPRRINILIWIMV 240
BLAST of CSPI03G23140 vs. ExPASy TrEMBL
Match:
A0A5D3DE60 (zf-RVT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold494G00090 PE=4 SV=1)
HSP 1 Score: 186.4 bits (472), Expect = 1.6e-43
Identity = 109/274 (39.78%), Postives = 149/274 (54.38%), Query Frame = 0
Query: 13 MRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLW 72
MR FF +G+ K+N LV W+ V KDGGL LG +K N ALL+KWGWR+SKE+++LW
Sbjct: 1 MRNFFREGHADSKINQLVNWNKVSSLPKDGGLGLGGIKIHNTALLAKWGWRYSKEESALW 60
Query: 73 CQVIISIHGSSTFNWHS-----NEKETH------------------------------PW 132
QVI SIHG F+W + N +H PW
Sbjct: 61 RQVIRSIHGKEAFDWFTKGKSGNSLRSHWVNIARFWRLVDSLASFNLGNGLRIGFRIDPW 120
Query: 133 MDIITLERKFPRLVRIALNPNGSVSNHWDSSTNSWSIYFRRSLNDEEILDFRTLLSQISP 192
+ ++ +F RL IAL P SW + FRRSL DEEI +F++LL +S
Sbjct: 121 VGNTPIKEQFSRLFSIALWPRCYFLFF------SWPLAFRRSLEDEEITEFQSLLFLLST 180
Query: 193 SQSASFPDQRFWSLETSGSFLVKSLVKHLSTSSPLESFLYKRFWKSNSPRRINISIWIML 252
+ + D R WS+E+ G F KSL HL T+SP++ L+ +S SPRRINI IWIM+
Sbjct: 181 EKVVNSDDFRSWSIESHGRFSDKSLSTHLKTASPMDKRLFSAILQSGSPRRINILIWIMV 240
BLAST of CSPI03G23140 vs. ExPASy TrEMBL
Match:
A0A5A7SP09 (Vacuolar fusion protein MON1 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G00570 PE=3 SV=1)
HSP 1 Score: 175.3 bits (443), Expect = 3.7e-40
Identity = 92/198 (46.46%), Postives = 116/198 (58.59%), Query Frame = 0
Query: 15 KFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQ 74
+FFW+GN KLN+LVKW+ V KS DG L L KLK +NMALL+KW WRF E +SLWC+
Sbjct: 185 EFFWEGNIDSKLNNLVKWELVTKSQGDGELGLDKLKIRNMALLAKWRWRFLDEPSSLWCK 244
Query: 75 VIISIHGSSTFNWHSNEKET-----------------------------------HPWMD 134
V+ SIH S TF WH++ KE+ PWM+
Sbjct: 245 VVRSIHDSDTFIWHTSGKESSSLRSPWISISRQQRKVEILAVFKVGKGDRILFWLDPWMN 304
Query: 135 IITLERKFPRLVRIALNPNGSVSNHWDSSTNSWSIYFRRSLNDEEILDFRTLLSQISPSQ 178
I L KFPRL RIAL P GSV+N+WDSS++SWSI FR L +EEI DF+ LL + +
Sbjct: 305 SIALWIKFPRLYRIALPPKGSVTNYWDSSSSSWSIIFRCLLKEEEISDFQFLLESLDGRR 364
BLAST of CSPI03G23140 vs. ExPASy TrEMBL
Match:
A0A438D291 (Kinesin-like protein KIN-14I OS=Vitis vinifera OX=29760 GN=KIN14I_1 PE=4 SV=1)
HSP 1 Score: 167.5 bits (423), Expect = 7.8e-38
Identity = 95/242 (39.26%), Postives = 135/242 (55.79%), Query Frame = 0
Query: 6 LSSLERIMRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFS 65
++ +ER R F W G GK +HLV+W+AV K GGL +GK+ +N ALL KW WRF
Sbjct: 2 VAKVERKQRDFLWSGVGEGKKDHLVRWEAVCKPRVKGGLGIGKIPLRNRALLGKWLWRFP 61
Query: 66 KEQNSLWCQVIISIHGSSTFNWHSNEKETHPWMDIITLERKFPRLVRIALNPNGSVSNHW 125
+E SLW QVI+SI+G+ + W +N E W D I L+ ++PRL R+ ++ N +S+
Sbjct: 62 RESTSLWHQVILSIYGTRSNGWDANTVEDLWWGDQI-LKDQYPRLYRVVMDKNIPISSIL 121
Query: 126 DS-STNSWSIYFRRSLNDEEILDFRTLLSQIS-PSQSASFPDQRFWSLETSGSFLVKSLV 185
S SW+ FRR+L D EI D L+ + + S S D R WSL +SG F VKS
Sbjct: 122 GSPHPFSWNFNFRRNLTDSEIEDLECLMHSLDCMNLSTSALDARSWSLLSSGLFTVKSFF 181
Query: 186 KHLSTSSPLESFLYKRF-WKSNSPRRINISIWIMLFENLDCASVLQRKLSSHALSPYVCP 245
LS F +F WKS P ++ +W++ + L+ +LQ + A SP +C
Sbjct: 182 TALSQMPDSSPFFPTKFVWKSQVPFKVKAFVWLVAHKKLNTNDLLQLRRPHKAFSPDICK 241
BLAST of CSPI03G23140 vs. ExPASy TrEMBL
Match:
A0A438F983 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDh000004_319 PE=4 SV=1)
HSP 1 Score: 166.8 bits (421), Expect = 1.3e-37
Identity = 94/251 (37.45%), Postives = 141/251 (56.18%), Query Frame = 0
Query: 1 MPESALSSLERIMRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKW 60
+P S + +ER+ R F W G GK +HLV+WD V K GGL LG + +N+ALL KW
Sbjct: 497 IPASMAAKIERLQRDFLWSGVGEGKRDHLVRWDVVCKPKTIGGLGLGNISWRNLALLGKW 556
Query: 61 GWRFSKEQNSLWCQVIISIHGSSTFNWHSNE--KETH--PWMDIITLERKFPRLVRIALN 120
WR+ +E ++LW QVI+SI+GS + W +N + +H PW I + + F + R+ ++
Sbjct: 557 LWRYPREGSALWHQVILSIYGSHSNGWDANTLVRWSHRCPWKAIAQVFQGFSLITRVVMD 616
Query: 121 PNGSVSNHWDSSTN-SWSIYFRRSLNDEEILDFRTLLSQISPSQ-SASFPDQRFWSLETS 180
N S+S+ S W++ FRR+L+D EI D L+ + S S PD R W L +S
Sbjct: 617 KNISISSVLGPSRPFLWNLNFRRNLSDSEIEDLEGLMRSLDDLYLSPSVPDARLWPLSSS 676
Query: 181 GSFLVKSLVKHLSTSS-PLESFLYKRFWKSNSPRRINISIWIMLFENLDCASVLQRKLSS 240
G F VKS LS SS ++F K W S P ++ +W++ + ++ +LQ +
Sbjct: 677 GLFSVKSFFLALSQSSGSPQNFPSKFVWNSQVPFKVKSFVWLVAHKKVNTNDMLQVRRPY 736
Query: 241 HALSPYVCPLC 245
ALSP +C LC
Sbjct: 737 KALSPDICILC 747
BLAST of CSPI03G23140 vs. NCBI nr
Match:
KAA0035739.1 (hypothetical protein E6C27_scaffold403G00100 [Cucumis melo var. makuwa])
HSP 1 Score: 189.9 bits (481), Expect = 3.0e-44
Identity = 110/274 (40.15%), Postives = 149/274 (54.38%), Query Frame = 0
Query: 13 MRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLW 72
MR FF +G+ K+N LV W+ V KDGGL LG +K N ALL+KWGWR+SKE+++LW
Sbjct: 1 MRNFFREGHADSKINQLVNWNKVSSPPKDGGLGLGGIKIHNTALLAKWGWRYSKEESALW 60
Query: 73 CQVIISIHGSSTFNWHSNEKETH-----------------------------------PW 132
QVI SIHG F+W + K + PW
Sbjct: 61 RQVIRSIHGKEAFDWFTKGKSGNSLRSPWVNIARFWRLVDSLASFNLGNGLRIGFRIDPW 120
Query: 133 MDIITLERKFPRLVRIALNPNGSVSNHWDSSTNSWSIYFRRSLNDEEILDFRTLLSQISP 192
+ ++ +F RL RIAL P S SW + FRRSL DEEI +F++LL +S
Sbjct: 121 VGNTPIKEQFSRLFRIALWPRCSFLFF------SWPLAFRRSLEDEEITEFQSLLFLLST 180
Query: 193 SQSASFPDQRFWSLETSGSFLVKSLVKHLSTSSPLESFLYKRFWKSNSPRRINISIWIML 252
+ + D R WS+E+ G F KSL HL T+SP++ L+ +S SPRRINI IWIM+
Sbjct: 181 EKVVNSDDFRSWSIESHGRFSDKSLSTHLKTASPMDKRLFSAILQSGSPRRINILIWIMV 240
BLAST of CSPI03G23140 vs. NCBI nr
Match:
TYK21876.1 (hypothetical protein E5676_scaffold494G00090 [Cucumis melo var. makuwa])
HSP 1 Score: 186.4 bits (472), Expect = 3.3e-43
Identity = 109/274 (39.78%), Postives = 149/274 (54.38%), Query Frame = 0
Query: 13 MRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLW 72
MR FF +G+ K+N LV W+ V KDGGL LG +K N ALL+KWGWR+SKE+++LW
Sbjct: 1 MRNFFREGHADSKINQLVNWNKVSSLPKDGGLGLGGIKIHNTALLAKWGWRYSKEESALW 60
Query: 73 CQVIISIHGSSTFNWHS-----NEKETH------------------------------PW 132
QVI SIHG F+W + N +H PW
Sbjct: 61 RQVIRSIHGKEAFDWFTKGKSGNSLRSHWVNIARFWRLVDSLASFNLGNGLRIGFRIDPW 120
Query: 133 MDIITLERKFPRLVRIALNPNGSVSNHWDSSTNSWSIYFRRSLNDEEILDFRTLLSQISP 192
+ ++ +F RL IAL P SW + FRRSL DEEI +F++LL +S
Sbjct: 121 VGNTPIKEQFSRLFSIALWPRCYFLFF------SWPLAFRRSLEDEEITEFQSLLFLLST 180
Query: 193 SQSASFPDQRFWSLETSGSFLVKSLVKHLSTSSPLESFLYKRFWKSNSPRRINISIWIML 252
+ + D R WS+E+ G F KSL HL T+SP++ L+ +S SPRRINI IWIM+
Sbjct: 181 EKVVNSDDFRSWSIESHGRFSDKSLSTHLKTASPMDKRLFSAILQSGSPRRINILIWIMV 240
BLAST of CSPI03G23140 vs. NCBI nr
Match:
KAA0032570.1 (protein SAND [Cucumis melo var. makuwa] >TYK20915.1 protein SAND [Cucumis melo var. makuwa])
HSP 1 Score: 175.3 bits (443), Expect = 7.7e-40
Identity = 92/198 (46.46%), Postives = 116/198 (58.59%), Query Frame = 0
Query: 15 KFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQ 74
+FFW+GN KLN+LVKW+ V KS DG L L KLK +NMALL+KW WRF E +SLWC+
Sbjct: 185 EFFWEGNIDSKLNNLVKWELVTKSQGDGELGLDKLKIRNMALLAKWRWRFLDEPSSLWCK 244
Query: 75 VIISIHGSSTFNWHSNEKET-----------------------------------HPWMD 134
V+ SIH S TF WH++ KE+ PWM+
Sbjct: 245 VVRSIHDSDTFIWHTSGKESSSLRSPWISISRQQRKVEILAVFKVGKGDRILFWLDPWMN 304
Query: 135 IITLERKFPRLVRIALNPNGSVSNHWDSSTNSWSIYFRRSLNDEEILDFRTLLSQISPSQ 178
I L KFPRL RIAL P GSV+N+WDSS++SWSI FR L +EEI DF+ LL + +
Sbjct: 305 SIALWIKFPRLYRIALPPKGSVTNYWDSSSSSWSIIFRCLLKEEEISDFQFLLESLDGRR 364
BLAST of CSPI03G23140 vs. NCBI nr
Match:
RVW29541.1 (Kinesin-like protein KIN-14I [Vitis vinifera])
HSP 1 Score: 167.5 bits (423), Expect = 1.6e-37
Identity = 95/242 (39.26%), Postives = 135/242 (55.79%), Query Frame = 0
Query: 6 LSSLERIMRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFS 65
++ +ER R F W G GK +HLV+W+AV K GGL +GK+ +N ALL KW WRF
Sbjct: 2 VAKVERKQRDFLWSGVGEGKKDHLVRWEAVCKPRVKGGLGIGKIPLRNRALLGKWLWRFP 61
Query: 66 KEQNSLWCQVIISIHGSSTFNWHSNEKETHPWMDIITLERKFPRLVRIALNPNGSVSNHW 125
+E SLW QVI+SI+G+ + W +N E W D I L+ ++PRL R+ ++ N +S+
Sbjct: 62 RESTSLWHQVILSIYGTRSNGWDANTVEDLWWGDQI-LKDQYPRLYRVVMDKNIPISSIL 121
Query: 126 DS-STNSWSIYFRRSLNDEEILDFRTLLSQIS-PSQSASFPDQRFWSLETSGSFLVKSLV 185
S SW+ FRR+L D EI D L+ + + S S D R WSL +SG F VKS
Sbjct: 122 GSPHPFSWNFNFRRNLTDSEIEDLECLMHSLDCMNLSTSALDARSWSLLSSGLFTVKSFF 181
Query: 186 KHLSTSSPLESFLYKRF-WKSNSPRRINISIWIMLFENLDCASVLQRKLSSHALSPYVCP 245
LS F +F WKS P ++ +W++ + L+ +LQ + A SP +C
Sbjct: 182 TALSQMPDSSPFFPTKFVWKSQVPFKVKAFVWLVAHKKLNTNDLLQLRRPHKAFSPDICK 241
BLAST of CSPI03G23140 vs. NCBI nr
Match:
RVW56511.1 (putative ribonuclease H protein [Vitis vinifera])
HSP 1 Score: 166.8 bits (421), Expect = 2.7e-37
Identity = 94/251 (37.45%), Postives = 141/251 (56.18%), Query Frame = 0
Query: 1 MPESALSSLERIMRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKW 60
+P S + +ER+ R F W G GK +HLV+WD V K GGL LG + +N+ALL KW
Sbjct: 497 IPASMAAKIERLQRDFLWSGVGEGKRDHLVRWDVVCKPKTIGGLGLGNISWRNLALLGKW 556
Query: 61 GWRFSKEQNSLWCQVIISIHGSSTFNWHSNE--KETH--PWMDIITLERKFPRLVRIALN 120
WR+ +E ++LW QVI+SI+GS + W +N + +H PW I + + F + R+ ++
Sbjct: 557 LWRYPREGSALWHQVILSIYGSHSNGWDANTLVRWSHRCPWKAIAQVFQGFSLITRVVMD 616
Query: 121 PNGSVSNHWDSSTN-SWSIYFRRSLNDEEILDFRTLLSQISPSQ-SASFPDQRFWSLETS 180
N S+S+ S W++ FRR+L+D EI D L+ + S S PD R W L +S
Sbjct: 617 KNISISSVLGPSRPFLWNLNFRRNLSDSEIEDLEGLMRSLDDLYLSPSVPDARLWPLSSS 676
Query: 181 GSFLVKSLVKHLSTSS-PLESFLYKRFWKSNSPRRINISIWIMLFENLDCASVLQRKLSS 240
G F VKS LS SS ++F K W S P ++ +W++ + ++ +LQ +
Sbjct: 677 GLFSVKSFFLALSQSSGSPQNFPSKFVWNSQVPFKVKSFVWLVAHKKVNTNDMLQVRRPY 736
Query: 241 HALSPYVCPLC 245
ALSP +C LC
Sbjct: 737 KALSPDICILC 747
BLAST of CSPI03G23140 vs. TAIR 10
Match:
AT4G29090.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 58.5 bits (140), Expect = 9.8e-09
Identity = 64/291 (21.99%), Postives = 110/291 (37.80%), Query Frame = 0
Query: 1 MPESALSSLERIMRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKW 60
+P++ + ++ F+W+ + K H WD + +GG+ ++ N+ALL K
Sbjct: 13 LPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDIEAFNLALLGKQ 72
Query: 61 GWRFSKEQNSLWCQVIIS--IHGSSTFNWHSNEKETHPWMDIITLERKFPRLVRIALNPN 120
WR SL +V S H S N + + W I + + R A+ N
Sbjct: 73 MWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEILRQGAR-AVVGN 132
Query: 121 GSVSNHW-----DSSTNSWSIYFRR----------------SLNDE-------EILDF-- 180
G W DS S ++ +R L DE ++++
Sbjct: 133 GEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGREWRKDVIEMLF 192
Query: 181 ----RTLLSQISPSQSASFPDQRFWSLETSGSFLVKS-------LVKHLST----SSPLE 240
R L+ ++ P D W +SG + VKS ++ S+ S P
Sbjct: 193 PEVERKLIGELRPG-GRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSL 252
Query: 241 SFLYKRFWKSNSPRRINISIWIMLFENLDCASVLQRKLSSHALSPYVCPLC 245
+ +Y++ WKS + +I +W L +L A L + S + CP C
Sbjct: 253 NPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSC 301
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P0C2F6 | 1.2e-11 | 43.42 | Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7T2Y0 | 1.5e-44 | 40.15 | zf-RVT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... | [more] |
A0A5D3DE60 | 1.6e-43 | 39.78 | zf-RVT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... | [more] |
A0A5A7SP09 | 3.7e-40 | 46.46 | Vacuolar fusion protein MON1 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
A0A438D291 | 7.8e-38 | 39.26 | Kinesin-like protein KIN-14I OS=Vitis vinifera OX=29760 GN=KIN14I_1 PE=4 SV=1 | [more] |
A0A438F983 | 1.3e-37 | 37.45 | Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDh000004_319 P... | [more] |
Match Name | E-value | Identity | Description | |
KAA0035739.1 | 3.0e-44 | 40.15 | hypothetical protein E6C27_scaffold403G00100 [Cucumis melo var. makuwa] | [more] |
TYK21876.1 | 3.3e-43 | 39.78 | hypothetical protein E5676_scaffold494G00090 [Cucumis melo var. makuwa] | [more] |
KAA0032570.1 | 7.7e-40 | 46.46 | protein SAND [Cucumis melo var. makuwa] >TYK20915.1 protein SAND [Cucumis melo v... | [more] |
RVW29541.1 | 1.6e-37 | 39.26 | Kinesin-like protein KIN-14I [Vitis vinifera] | [more] |
RVW56511.1 | 2.7e-37 | 37.45 | putative ribonuclease H protein [Vitis vinifera] | [more] |
Match Name | E-value | Identity | Description | |
AT4G29090.1 | 9.8e-09 | 21.99 | Ribonuclease H-like superfamily protein | [more] |