CSPI03G21780 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G21780
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	double-stranded RNA-binding protein 4-like isoform X1
Location	Chr3: 18187310 .. 18191960 (-)
RNA-Seq Expression	CSPI03G21780
Synteny	CSPI03G21780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCAGAATAATGCAACTACTTCTACTGATGGTGTTGATACAAACTGTTACGAGGAGCAGAACACAGAACTGAATGACAATGAAATACTGAATGATGCTGCAATAGAACATACTGACAATGTTGTTATAATTGAAGTTGCAAATGAAGCCGACCGTAGTAGAAGCTGTGAGCCTACTGCAAATGATAGCAGCCGTGAACCTGCACCTGTCACACTCCATAGATCATCTCGGCAGTTATGTCTACCTTCATATCTTAGGGATTTCCATCACAACATGATTGGGAAGAAACATGTCACTTCAACAGCCCCCTATTTCTTTGGCAAATATCTTTCTTATGAATCTTATTCACCTAGACATAAACACTATTTGCTTAATGTGACTGTTTATGAACCTACCTTCTGTCACCCAGCTGTAAAGTTTCAGAATTGGAGAGATGATATGGTGAAGAAATAAATGCAATGGAACGTAACAAGACTTGGATAGTGACTTCATCGCCCAAAAGTCAACACATACTAGGAAGCAAATGGGTGTATAAAGTCAAATATCTTCCCGGTGGAACTGTTGATCGGTACAAGGTGCGCCTTATTGCTTAAGGCTATTATCAACAAGAAGGCATGGACTTTTTTGACACATTTCCTTCCGTGGCCTTTGTCACAGTAAAGGTATTTCTATCCTTAGTGACCTCCTTTAATTGGCAATTTATTCAAATGGATATTACCAATGCCTTTTTAAATGGAGACTTATTTGAAGAGATTTATATGTTCTTACCCATGAGATACAAGACAACTATAATACCAAATAAGGGGGAGAAGCTCGTTTGTCGATTGAATAAGTCAATATATGGCCTCAAACAAGCCTTTAAACAATGGTTTGTGAAGTTTTCTTCTGTATTGTCTACACATGGCTTCATCCAGTCAAAGTCCGACTAGGCTATATTCGTGGAAGTGGTGAAACCTTTGTTGCATTGTTAGTATAGATGGATAACATATTACCAATTGGACCTTCCCCGGATGAGATCAATGTTATCAAAAAGATCCTCAAAAGCCATTTTAAAGTTAAGGACTTGGGACAAACCAAATATTTCCTAGGATTAGAGTTATCTCGATCCAAACAAGGTTTGTTTCTATCACAATGAAAATATTCCCTTCAAATCCTTGAAGACACTGAATACCTTGCTGCGAAGCTTGCTTCATTACCTATGGATCCAAACATCAAGCTCTCAAAAGCCAACTAATACTCATCTGAATGCTGCTCATCACTTGTTGAAATATTTAAAACGCCAGGGCAAGGCATTTTGATTAAGCCAACTCACTAGTTTCATCTCAAGGCTTATGTTGACACTGATTGGGGGGCATGCCTTGACACTCGACAATCCATTTCAGGCTATTGTATTTTCTTAGGGAACTCATTAGTCTCATGGAAATCGAAGAAGCAAGTCACTGTTTCGAGATCATTTGCAGAGGCAGAATATATAGAGCCTTGGCATCTGTAATAAGTGAACTTATATGGATTTCTCAACTTCTAATTGATCTACACGTTCAACATATGTTACCAACAACTGTGTTTTGTGACAACCAAGCTGCCGTTGCTATTGCATCCCATCCAATCCTACCTTCTATTAAACCACCAATTCATCCAAAAGCTTAAGCTGGTGGTTGAACGCAAAATTTAATTATATATCACCAACACTCCCCCTCACTTGTGGGCTTGAAATATCTGAAAGGCCCAACAAGTGGAATCAATTTTACCTCCCTTTTGGGTTTGAAATATTTGAAAGGCCCAACAAGTGGAAATTGATTTTAATTGGGGAGGAAACGACAATGCAGGGGCTTGAACACAGGACCTCCCTGGACCACCTGCTCTGATACCATATTAAACCACCAATTCATCCAAAAGCTTAAGCTGGTGGTTGAAGGCAAATTTAATTATATATCACCAACACCATGATCAGACGAAGCACATAAAAATCGATTGCCACTTTGTAAGAGACAAGATCATTGATGGCTTCTTGAAAGTATTGTCAATTCGATTACCCTTACAACTAGCTGACATGTTTACCGAGTCATTATCGGCTGTTTTGTCAAAACTTTTTGTCAAGTTGGGTGTCCTTGATGTCCATTTCCAACTGAAGAGTATTAAAATGATGCCTTGTAAATAATTGATTCTTGTTATTAATTGTCGTTAATCTTGTAGGATTGGTTTCTTTGTTATCAAGTGATTTTTTTTTTGAAAAGGATACGAGTCTCAATATTATTAGTATAAATAAAGAGACAAAGCTCAATGTACATGAGGGTTATACAAAGAGCAATAGGGGAAGGAGGATTAGCAGGCACATCCGAGCATCTCAAGTAGGTTGACACCCCCTTAGCGCCCTTAACACATCCAAAAAGCGACAATACAAGATCAAACAAAAAACCACAAATACAAAGCCAAAAAAAAATGATAAAAAGAATCTGTCCAAAGCAAAATCATAAATAAAAGGCAGCATGCTGAGAACAAAGAAGAATAAGCCTTGATTGATTGAACAAAAAGCTGTTTGAAGCATGGGGCTGATCAGGAAGTCCTGATGATCAAGGACTTCAAAGTGGGGAGGCTGTGAAGGCTGGCCAATATAACACAATATCCTACGTCAAAGTTCTTTTTCATTACTTTTTCTAAAAATTCTCAATCTACTCTGTCAAAGGCCATTTCAAGGTCTAATTTAGTGATCCATCCTTTCTTTTTTCGGATTCTATAGTCCTCCACAGCTTCGTTTGCTATTAAAATAGGGTCCAAGATTTGACGCCCTTCCAGAAGGCCACATTATGATGGAGCAATAATACTTGGCATTACTTTCTTTAATCTTTCTGCAAGAACCTTTGCAAACAACTTTTAAATTAATGTTGAAACTGATCCAGCAGAGAACGTGAAACTGACCTTCCTTCTCTTGACCATGAATGAGAAGTAACTCCATTAAGAAATAACCCCAATATTCAATGTTTATTACCCTTGCACTTTGAAAACGTTGTTAAGTACTTGCACTTTACCAATAATGAGGTCAAATATTGACATGTTGAAAAAAAACGCATGTATTTGGATGTTGAAGTACTTTTTAATTTTATTGGTTTCATATCTCTATACAAACTAACTTCATATCTCATATACAAACTATGTCCCCTGTTCTTTCTTCAGGATTTGATGTTATGCAAGTCCATTTTGTCTGAATATACTGACAAAATGGGTTTGGAAAGACCTATATACACAACTAAACACAATCAAGGCTCGGTTGCATTCTTCCAATCCACCTTGGTTTTTGATGGTGTGGTTTATACTAGTGATCTTGGTAGGACTAAGAAAGAGGCAGAGCAATTGGCAGCACGTGCAGCTATTCTTTCACTTCATGGTATTTGATTGTTGTAAACTAGTACTAAATTATTTCAAAATATTTGGTGCCTTGAATAAGATTATTATTTTTTTTAAAAAAATAACAATGAGGATAACAATTATTATTATTTTGTAGAAGATGCAACGAATCCTAAATCACAAAAAGCTCTTGGGGACATCATTGCATCTAAAGTCAGATTCCATGCAATGTTGCAAAAGGTTAAAGATTCAAATTTTTCTCAATTTCAACCGAAATCCATGCCTGAAAATACAGTGGAACGTGTTGCAATGACAGTTAATGAAGGTAAAGAACTTAAAGATGCTGTTTTAGACGGTGGAGTGGTATGTGGTGCAATTTCAGAGGCTTGTCCAACTTCTCAATTTCAACCTGAATTTAGTGCAACAAAACCGGATGGATCATCCCCTCTAATGAGACTGCCAATAGAATTTGTGCCTTCAACTTTAGAGGAGCCTGTTGGCTATCACGCAACAATTGGGTCTAAAAGGAAATCTAAGAACAAGAGAAAGGCACGTAAGAAACTGTGTATGGAGAACCGGTAATTTTCTTTTCATGAAACTTCATCCAACGTCGTTGTAATTATAAATGTCGATAATTTACAGTTTATAACTCCACTGCACATTTATTTTATGGTTTTTAGGGTATTATATAGTGGTTTACAGTAAACACCAGTCTTGTTACAACTAGAGCTATTCAATTTGCATGTTCATGGAGTTAAGAAAATCAATCTAAATTTCTGTGGTAAGACTACTACGCTGCAATTTATTTCAATGAAAAAGTGAAGTGATTGATATCCTTTCAAGGTAAGGTGTGGATTCAAATCATGATGGTAGTCATCTAAGATACTAAAATATCTTACAACTTTCTTAATACTCAATGTAGTATCGAGTAAGATTTGATAGTTGTGCCTATGATTAATATAGATTTATTTAACTTATTCTGGTGCCCACAGTTGTTAAAAATGCACAAAAACTGGGGGGCCTTTGTTTTGTCTACAATATGATGGTATCATATGGATTGTAAATGAATTCAAATGAGTGATTAGTTGGAGGGAAGTTACTCTTGTTTTATTGGGCTATATGATAGGAGAGATGGCATGTCCCCTCAAGAGTTCTGCTATTTCTATGTTCTACTTGAATTATATTAATTTAGGCTCCATATGTGTAAGTTATTTCGATCGTATAACTAAATCTCCTTTTGTTAAAAATGACCAGGGTGGCTACCGAAACAAGTCAAACTGCTGCTCCTTGCTCCGTAGCTCGATGA

mRNA sequence

ATGTCTCAGAATAATGCAACTACTTCTACTGATGGTGTTGATACAAACTGTTACGAGGAGCAGAACACAGAACTGAATGACAATGAAATACTGAATGATGCTGCAATAGAACATACTGACAATGTTGTTATAATTGAAGTTGCAAATGAAGCCGACCGTAGTAGAAGCTGTGAGCCTACTGCAAATGATAGCAGCCGTGAACCTGCACCTGTCACACTCCATAGATCATCTCGGCAGTTATGTCTACCTTCATATCTTAGGGATTTCCATCACAACATGATTGGGAAGAAACATGATTTGATGTTATGCAAGTCCATTTTGTCTGAATATACTGACAAAATGGGTTTGGAAAGACCTATATACACAACTAAACACAATCAAGGCTCGGTTGCATTCTTCCAATCCACCTTGGTTTTTGATGGTGTGGTTTATACTAGTGATCTTGGTAGGACTAAGAAAGAGGCAGAGCAATTGGCAGCACGTGCAGCTATTCTTTCACTTCATGAAGATGCAACGAATCCTAAATCACAAAAAGCTCTTGGGGACATCATTGCATCTAAAGTCAGATTCCATGCAATGTTGCAAAAGGTTAAAGATTCAAATTTTTCTCAATTTCAACCGAAATCCATGCCTGAAAATACAGTGGAACGTGTTGCAATGACAGTTAATGAAGGTAAAGAACTTAAAGATGCTGTTTTAGACGGTGGAGTGGTATGTGGTGCAATTTCAGAGGCTTGTCCAACTTCTCAATTTCAACCTGAATTTAGTGCAACAAAACCGGATGGATCATCCCCTCTAATGAGACTGCCAATAGAATTTGTGCCTTCAACTTTAGAGGAGCCTGTTGGCTATCACGCAACAATTGGGTCTAAAAGGAAATCTAAGAACAAGAGAAAGGCACGTAAGAAACTGTGTATGGAGAACCGGGTGGCTACCGAAACAAGTCAAACTGCTGCTCCTTGCTCCGTAGCTCGATGA

Coding sequence (CDS)

ATGTCTCAGAATAATGCAACTACTTCTACTGATGGTGTTGATACAAACTGTTACGAGGAGCAGAACACAGAACTGAATGACAATGAAATACTGAATGATGCTGCAATAGAACATACTGACAATGTTGTTATAATTGAAGTTGCAAATGAAGCCGACCGTAGTAGAAGCTGTGAGCCTACTGCAAATGATAGCAGCCGTGAACCTGCACCTGTCACACTCCATAGATCATCTCGGCAGTTATGTCTACCTTCATATCTTAGGGATTTCCATCACAACATGATTGGGAAGAAACATGATTTGATGTTATGCAAGTCCATTTTGTCTGAATATACTGACAAAATGGGTTTGGAAAGACCTATATACACAACTAAACACAATCAAGGCTCGGTTGCATTCTTCCAATCCACCTTGGTTTTTGATGGTGTGGTTTATACTAGTGATCTTGGTAGGACTAAGAAAGAGGCAGAGCAATTGGCAGCACGTGCAGCTATTCTTTCACTTCATGAAGATGCAACGAATCCTAAATCACAAAAAGCTCTTGGGGACATCATTGCATCTAAAGTCAGATTCCATGCAATGTTGCAAAAGGTTAAAGATTCAAATTTTTCTCAATTTCAACCGAAATCCATGCCTGAAAATACAGTGGAACGTGTTGCAATGACAGTTAATGAAGGTAAAGAACTTAAAGATGCTGTTTTAGACGGTGGAGTGGTATGTGGTGCAATTTCAGAGGCTTGTCCAACTTCTCAATTTCAACCTGAATTTAGTGCAACAAAACCGGATGGATCATCCCCTCTAATGAGACTGCCAATAGAATTTGTGCCTTCAACTTTAGAGGAGCCTGTTGGCTATCACGCAACAATTGGGTCTAAAAGGAAATCTAAGAACAAGAGAAAGGCACGTAAGAAACTGTGTATGGAGAACCGGGTGGCTACCGAAACAAGTCAAACTGCTGCTCCTTGCTCCGTAGCTCGATGA

Protein sequence

MSQNNATTSTDGVDTNCYEEQNTELNDNEILNDAAIEHTDNVVIIEVANEADRSRSCEPTANDSSREPAPVTLHRSSRQLCLPSYLRDFHHNMIGKKHDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKALGDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCGAISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVPSTLEEPVGYHATIGSKRKSKNKRKARKKLCMENRVATETSQTAAPCSVAR*

Homology

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BLAST of CSPI03G21780 vs. ExPASy Swiss-Prot
Match: Q6YW64 (Double-stranded RNA-binding protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB4 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.1e-08
Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = 0


Query: 99  DLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQL 158
           D++  KSIL EYT K   ++P Y+    +GSV  + S++ F G  YT    R KK+AEQ 
Sbjct: 125 DVVFSKSILHEYTTKTKTDQPEYSVTKTEGSVTPYVSSVSFAGHTYTGGAARNKKDAEQK 184

Query: 159 AARAAILSLHEDATNPKSQKALGDIIASKVRFHAMLQKVKDSNFSQ 205
           AARAA+ SL   ATN  S   +  I+ SK +   +++ +  S +++
Sbjct: 185 AARAAVKSLL--ATNYTS---MAKIVRSKEK---LIRAISPSGYNK 222

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BLAST of CSPI03G21780 vs. ExPASy Swiss-Prot
Match: O04492 (Double-stranded RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRB1 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.5e-07
Identity = 30/78 (38.46%), Postives = 41/78 (52.56%), Query Frame = 0


Query: 98  HDLMLCKSILSEYTDKMGLERPIYTTK--HNQGSVAFFQSTLVFDGVVYTSDLGRTKKEA 157
           H+  LCK++L EY  KM    P+Y  +     G V  F  T+   G+ YT    RTKK+A
Sbjct: 97  HETGLCKNLLQEYAQKMNYAIPLYQCQKVETLGRVTQFTCTVEIGGIKYTGAATRTKKDA 156

Query: 158 EQLAARAAILSLHEDATN 174
           E  A R A+L++  D  N
Sbjct: 157 EISAGRTALLAIQSDTKN 174

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BLAST of CSPI03G21780 vs. ExPASy Swiss-Prot
Match: Q0IV63 (Double-stranded RNA-binding protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB7 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.5e-05
Identity = 26/66 (39.39%), Postives = 36/66 (54.55%), Query Frame = 0


Query: 102 LCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAAR 161
           LCK++L EY  KM    P Y    +   +A F  T+   G+ Y     RTKK+AE  AAR
Sbjct: 118 LCKNLLQEYAQKMNYAIPSYICTKSASGLAPFICTVEIGGIQYIGAAARTKKDAEIKAAR 177

Query: 162 AAILSL 168
            A+L++
Sbjct: 178 TALLAI 183

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BLAST of CSPI03G21780 vs. ExPASy Swiss-Prot
Match: Q0IQN6 (Double-stranded RNA-binding protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB8 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.5e-05
Identity = 26/66 (39.39%), Postives = 36/66 (54.55%), Query Frame = 0


Query: 102 LCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAAR 161
           LCK++L EY  KM    P Y    +   +A F  T+   G+ Y     RTKK+AE  AAR
Sbjct: 118 LCKNLLQEYAQKMNYAIPSYICTKSASGLAPFICTVEIGGIQYIGAAARTKKDAEIKAAR 177

Query: 162 AAILSL 168
            A+L++
Sbjct: 178 TALLAI 183

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BLAST of CSPI03G21780 vs. ExPASy Swiss-Prot
Match: Q0DJA3 (Double-stranded RNA-binding protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB3 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 4.3e-05
Identity = 26/66 (39.39%), Postives = 35/66 (53.03%), Query Frame = 0


Query: 102 LCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAAR 161
           LCK++L EY  KM    P Y        +A F  T+   G+ Y     RTKK+AE  AAR
Sbjct: 120 LCKNLLQEYAQKMNYAIPSYICTKPASGLAPFLCTVEIGGIQYIGAAARTKKDAEIKAAR 179

Query: 162 AAILSL 168
            A+L++
Sbjct: 180 TALLAI 185

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BLAST of CSPI03G21780 vs. ExPASy TrEMBL
Match: A0A0A0LCN7 (DRBM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G345370 PE=4 SV=1)

HSP 1 Score: 627.9 bits (1618), Expect = 2.4e-176
Identity = 321/325 (98.77%), Postives = 322/325 (99.08%), Query Frame = 0


Query: 1   MSQNNATTSTDGVDTNCYEEQNTELNDNEILNDAAIEHTDNVVIIEVANEADRSRSCEPT 60
           MSQNNATTSTDGVDTNCYEEQNTELNDNEILNDAAIEHTDNVVI EVANEADRSRSCEPT
Sbjct: 1   MSQNNATTSTDGVDTNCYEEQNTELNDNEILNDAAIEHTDNVVITEVANEADRSRSCEPT 60

Query: 61  ANDSSREPAPVTLHRSSRQLCLPSYLRDFHHNMIGKKHDLMLCKSILSEYTDKMGLERPI 120
           ANDSSREPAPVTLHRSSRQLCLPSYLRDFH NMIGKKHDLMLCKSILSEYTDKMGLERPI
Sbjct: 61  ANDSSREPAPVTLHRSSRQLCLPSYLRDFHRNMIGKKHDLMLCKSILSEYTDKMGLERPI 120

Query: 121 YTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKAL 180
           YTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKAL
Sbjct: 121 YTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKAL 180

Query: 181 GDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCG 240
           GDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGG+VCG
Sbjct: 181 GDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGGMVCG 240

Query: 241 AISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVPSTLEEPVGYHATIGSKRKSKNKRKA 300
           AISEACPTSQFQPEFSATKPDGSSPLMRLPIEFV STLEEPVGYHATIGSKRKSKNKRKA
Sbjct: 241 AISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRSTLEEPVGYHATIGSKRKSKNKRKA 300

Query: 301 RKKLCMENRVATETSQTAAPCSVAR 326
           RKKLCMENRVATETSQTAAPCSVAR
Sbjct: 301 RKKLCMENRVATETSQTAAPCSVAR 325

[Close]

BLAST of CSPI03G21780 vs. ExPASy TrEMBL
Match: A0A1S3C485 (uncharacterized protein LOC103496837 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496837 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 4.2e-104
Identity = 199/229 (86.90%), Postives = 211/229 (92.14%), Query Frame = 0


Query: 97  KHDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAE 156
           + DL+LCKSILSEYTDKMGLERPIYTTKH++GSV  FQSTLVFDGVVYTSDL RTKKEAE
Sbjct: 157 REDLILCKSILSEYTDKMGLERPIYTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAE 216

Query: 157 QLAARAAILSLHEDATNPKSQKALGDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVE 216
           QLAARAAILSLHEDA N KSQK L DIIASKVRFHAMLQKVKDS+FSQ QPKSMPENTVE
Sbjct: 217 QLAARAAILSLHEDAINIKSQKTLADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVE 276

Query: 217 RVAMTVNEGKELKDAVLDGGVVCGAISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVPS 276
           RVAMTVNE K +KDAV D GVVCGAISEACPTS F+PEFS+TKP+GSSPL+RLPIEFVPS
Sbjct: 277 RVAMTVNEDKNVKDAVSDSGVVCGAISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPS 336

Query: 277 TLEEPVGYHATIGSKRKSKNKRKARKKLCMENRVATETSQTAAPCSVAR 326
           TLE PVG HAT GSKR+SKNKRKARKKLCMEN VATETSQTAAPCSVA+
Sbjct: 337 TLEVPVGDHATTGSKRRSKNKRKARKKLCMENGVATETSQTAAPCSVAQ 385

[Close]

BLAST of CSPI03G21780 vs. ExPASy TrEMBL
Match: A0A1S3C4R2 (uncharacterized protein LOC103496837 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496837 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 4.0e-102
Identity = 198/229 (86.46%), Postives = 210/229 (91.70%), Query Frame = 0


Query: 97  KHDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAE 156
           + DL+LCKSILSEYTDKMGLERPIYTTKH++GSV  FQSTLVFDGVVYTSDL RTKKEAE
Sbjct: 157 REDLILCKSILSEYTDKMGLERPIYTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAE 216

Query: 157 QLAARAAILSLHEDATNPKSQKALGDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVE 216
           QLAARAAILSLH DA N KSQK L DIIASKVRFHAMLQKVKDS+FSQ QPKSMPENTVE
Sbjct: 217 QLAARAAILSLH-DAINIKSQKTLADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVE 276

Query: 217 RVAMTVNEGKELKDAVLDGGVVCGAISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVPS 276
           RVAMTVNE K +KDAV D GVVCGAISEACPTS F+PEFS+TKP+GSSPL+RLPIEFVPS
Sbjct: 277 RVAMTVNEDKNVKDAVSDSGVVCGAISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPS 336

Query: 277 TLEEPVGYHATIGSKRKSKNKRKARKKLCMENRVATETSQTAAPCSVAR 326
           TLE PVG HAT GSKR+SKNKRKARKKLCMEN VATETSQTAAPCSVA+
Sbjct: 337 TLEVPVGDHATTGSKRRSKNKRKARKKLCMENGVATETSQTAAPCSVAQ 384

[Close]

BLAST of CSPI03G21780 vs. ExPASy TrEMBL
Match: A0A6J1F5U3 (double-stranded RNA-binding protein 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442377 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 3.3e-80
Identity = 168/228 (73.68%), Postives = 187/228 (82.02%), Query Frame = 0


Query: 99  DLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQL 158
           DLMLCKSILSEYT KM L+RP+YTTK ++GSV  FQSTLVFDGVVYT D+ R+KKEAEQL
Sbjct: 160 DLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQL 219

Query: 159 AARAAILSLHEDATNPKSQKALGDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERV 218
           AARAAILSLH DA NPKSQK L +IIASKVR HAM+QKVKDS+ SQ QPK MP+NTVE V
Sbjct: 220 AARAAILSLH-DAGNPKSQKTLAEIIASKVRLHAMMQKVKDSHPSQIQPKYMPDNTVEHV 279

Query: 219 AMTVNEGKELKDAVLDGGVVCGAISEACPT-SQFQPEFSATKPDGSSPLMRLPIEFVPST 278
             TVNE KE+  A+LD  V CGAISE CPT S   PEF + KP+ SSP  RLPIE VPST
Sbjct: 280 TTTVNEDKEVNGAILDNVVACGAISEICPTISHLGPEFRSIKPEASSPSERLPIESVPST 339

Query: 279 LEEPVGYHATIGSKRKSKNKRKARKKLCMENRVATETSQTAAPCSVAR 326
            EEPVG  AT GSK++SKNKRKARKKLCMEN+VAT TSQT APCS+A+
Sbjct: 340 SEEPVGDRAT-GSKKRSKNKRKARKKLCMENQVATGTSQT-APCSIAQ 384

[Close]

BLAST of CSPI03G21780 vs. ExPASy TrEMBL
Match: A0A6J1J4E3 (double-stranded RNA-binding protein 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482525 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 7.0e-75
Identity = 158/215 (73.49%), Postives = 174/215 (80.93%), Query Frame = 0


Query: 99  DLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQL 158
           DLMLCKSILSEYT KM L+RP+YTTK ++GSV  FQSTLVFDGVVYT D+ R+KKEAEQL
Sbjct: 160 DLMLCKSILSEYTVKMSLKRPMYTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQL 219

Query: 159 AARAAILSLHEDATNPKSQKALGDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERV 218
           AARAAILSLH DA NPKSQK L +IIASKVR HAM+QKVKDS+ SQ QPK MPENTVE V
Sbjct: 220 AARAAILSLH-DAGNPKSQKTLAEIIASKVRLHAMMQKVKDSHPSQIQPKYMPENTVEHV 279

Query: 219 AMTVNEGKELKDAVLDGGVVCGAISEACPT-SQFQPEFSATKPDGSSPLMRLPIEFVPST 278
             TVNE KE+  A+LD  V CGAISE CPT S   PE  + KP  SSP  RLPIE VPST
Sbjct: 280 TTTVNEDKEVNGAILDNVVACGAISEICPTISHLGPELRSIKPVASSPSERLPIESVPST 339

Query: 279 LEEPVGYHATIGSKRKSKNKRKARKKLCMENRVAT 313
            EEPVG  AT G+K++SKNKRKARKKLCMEN+VAT
Sbjct: 340 SEEPVGDRAT-GTKKRSKNKRKARKKLCMENQVAT 372

[Close]

BLAST of CSPI03G21780 vs. NCBI nr
Match: XP_004149792.1 (uncharacterized protein LOC101213863 isoform X1 [Cucumis sativus] >KAE8650625.1 hypothetical protein Csa_011062 [Cucumis sativus])

HSP 1 Score: 441.8 bits (1135), Expect = 5.1e-120
Identity = 225/229 (98.25%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 97  KHDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAE 156
           + DLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAE
Sbjct: 157 REDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAE 216

Query: 157 QLAARAAILSLHEDATNPKSQKALGDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVE 216
           QLAARAAILSLHEDATNPKSQKALGDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVE
Sbjct: 217 QLAARAAILSLHEDATNPKSQKALGDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVE 276

Query: 217 RVAMTVNEGKELKDAVLDGGVVCGAISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVPS 276
           RVAMTVNEGKELKDAVLDGG+VCGAISEACPTSQFQPEFSATKPDGSSPLMRLPIEFV S
Sbjct: 277 RVAMTVNEGKELKDAVLDGGMVCGAISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRS 336

Query: 277 TLEEPVGYHATIGSKRKSKNKRKARKKLCMENRVATETSQTAAPCSVAR 326
           TLEEPVGYHATIGSKRKSKNKRKARKKLCMENRVATETSQTAAPCSVAR
Sbjct: 337 TLEEPVGYHATIGSKRKSKNKRKARKKLCMENRVATETSQTAAPCSVAR 385

[Close]

BLAST of CSPI03G21780 vs. NCBI nr
Match: XP_011651405.1 (double-stranded RNA-binding protein 4 isoform X2 [Cucumis sativus])

HSP 1 Score: 435.3 bits (1118), Expect = 4.8e-118
Identity = 224/229 (97.82%), Postives = 226/229 (98.69%), Query Frame = 0


Query: 97  KHDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAE 156
           + DLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAE
Sbjct: 157 REDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAE 216

Query: 157 QLAARAAILSLHEDATNPKSQKALGDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVE 216
           QLAARAAILSLH DATNPKSQKALGDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVE
Sbjct: 217 QLAARAAILSLH-DATNPKSQKALGDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVE 276

Query: 217 RVAMTVNEGKELKDAVLDGGVVCGAISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVPS 276
           RVAMTVNEGKELKDAVLDGG+VCGAISEACPTSQFQPEFSATKPDGSSPLMRLPIEFV S
Sbjct: 277 RVAMTVNEGKELKDAVLDGGMVCGAISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRS 336

Query: 277 TLEEPVGYHATIGSKRKSKNKRKARKKLCMENRVATETSQTAAPCSVAR 326
           TLEEPVGYHATIGSKRKSKNKRKARKKLCMENRVATETSQTAAPCSVAR
Sbjct: 337 TLEEPVGYHATIGSKRKSKNKRKARKKLCMENRVATETSQTAAPCSVAR 384

[Close]

BLAST of CSPI03G21780 vs. NCBI nr
Match: XP_008457066.1 (PREDICTED: uncharacterized protein LOC103496837 isoform X1 [Cucumis melo])

HSP 1 Score: 387.9 bits (995), Expect = 8.7e-104
Identity = 199/229 (86.90%), Postives = 211/229 (92.14%), Query Frame = 0


Query: 97  KHDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAE 156
           + DL+LCKSILSEYTDKMGLERPIYTTKH++GSV  FQSTLVFDGVVYTSDL RTKKEAE
Sbjct: 157 REDLILCKSILSEYTDKMGLERPIYTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAE 216

Query: 157 QLAARAAILSLHEDATNPKSQKALGDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVE 216
           QLAARAAILSLHEDA N KSQK L DIIASKVRFHAMLQKVKDS+FSQ QPKSMPENTVE
Sbjct: 217 QLAARAAILSLHEDAINIKSQKTLADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVE 276

Query: 217 RVAMTVNEGKELKDAVLDGGVVCGAISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVPS 276
           RVAMTVNE K +KDAV D GVVCGAISEACPTS F+PEFS+TKP+GSSPL+RLPIEFVPS
Sbjct: 277 RVAMTVNEDKNVKDAVSDSGVVCGAISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPS 336

Query: 277 TLEEPVGYHATIGSKRKSKNKRKARKKLCMENRVATETSQTAAPCSVAR 326
           TLE PVG HAT GSKR+SKNKRKARKKLCMEN VATETSQTAAPCSVA+
Sbjct: 337 TLEVPVGDHATTGSKRRSKNKRKARKKLCMENGVATETSQTAAPCSVAQ 385

[Close]

BLAST of CSPI03G21780 vs. NCBI nr
Match: XP_008457067.1 (PREDICTED: uncharacterized protein LOC103496837 isoform X2 [Cucumis melo])

HSP 1 Score: 381.3 bits (978), Expect = 8.2e-102
Identity = 198/229 (86.46%), Postives = 210/229 (91.70%), Query Frame = 0


Query: 97  KHDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAE 156
           + DL+LCKSILSEYTDKMGLERPIYTTKH++GSV  FQSTLVFDGVVYTSDL RTKKEAE
Sbjct: 157 REDLILCKSILSEYTDKMGLERPIYTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAE 216

Query: 157 QLAARAAILSLHEDATNPKSQKALGDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVE 216
           QLAARAAILSLH DA N KSQK L DIIASKVRFHAMLQKVKDS+FSQ QPKSMPENTVE
Sbjct: 217 QLAARAAILSLH-DAINIKSQKTLADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVE 276

Query: 217 RVAMTVNEGKELKDAVLDGGVVCGAISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVPS 276
           RVAMTVNE K +KDAV D GVVCGAISEACPTS F+PEFS+TKP+GSSPL+RLPIEFVPS
Sbjct: 277 RVAMTVNEDKNVKDAVSDSGVVCGAISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPS 336

Query: 277 TLEEPVGYHATIGSKRKSKNKRKARKKLCMENRVATETSQTAAPCSVAR 326
           TLE PVG HAT GSKR+SKNKRKARKKLCMEN VATETSQTAAPCSVA+
Sbjct: 337 TLEVPVGDHATTGSKRRSKNKRKARKKLCMENGVATETSQTAAPCSVAQ 384

[Close]

BLAST of CSPI03G21780 vs. NCBI nr
Match: XP_038897078.1 (double-stranded RNA-binding protein 8-like isoform X1 [Benincasa hispida] >XP_038897083.1 double-stranded RNA-binding protein 8-like isoform X1 [Benincasa hispida])

HSP 1 Score: 357.5 bits (916), Expect = 1.3e-94
Identity = 185/230 (80.43%), Postives = 203/230 (88.26%), Query Frame = 0


Query: 97  KHDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAE 156
           + DLM CKSILSEYTDKM L+RPIYTTKH++GSV FFQSTL FDGVVYTSD+ R+KKEAE
Sbjct: 158 REDLMSCKSILSEYTDKMSLKRPIYTTKHHKGSVPFFQSTLDFDGVVYTSDVSRSKKEAE 217

Query: 157 QLAARAAILSLHEDATNPKSQKALGDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVE 216
           QLAARAAILSLH DA NPKSQK L +IIASKVRFHA LQKVKDS+FSQ QPKSMPEN VE
Sbjct: 218 QLAARAAILSLHGDARNPKSQKTLAEIIASKVRFHATLQKVKDSHFSQIQPKSMPENKVE 277

Query: 217 RVAMTVNEGKELKDAVLDGGVVCGAISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVPS 276
            VAMTV+E KE+KDA+LD GVVCGAISE CPTS F+PEF +TKP+ SSP +RLPIEFVPS
Sbjct: 278 HVAMTVDENKEVKDAILDNGVVCGAISEVCPTSHFRPEFRSTKPEASSPPVRLPIEFVPS 337

Query: 277 TLEEPVGYHA-TIGSKRKSKNKRKARKKLCMENRVATETSQTAAPCSVAR 326
           TLEEPVG HA   GSKR+SKNKRKARKKLCMEN+V TETSQT APCSVA+
Sbjct: 338 TLEEPVGDHARATGSKRRSKNKRKARKKLCMENQVTTETSQT-APCSVAQ 386

[Close]

BLAST of CSPI03G21780 vs. TAIR 10
Match: AT1G09700.1 (dsRNA-binding domain-like superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 2.5e-08
Identity = 30/78 (38.46%), Postives = 41/78 (52.56%), Query Frame = 0


Query: 98  HDLMLCKSILSEYTDKMGLERPIYTTK--HNQGSVAFFQSTLVFDGVVYTSDLGRTKKEA 157
           H+  LCK++L EY  KM    P+Y  +     G V  F  T+   G+ YT    RTKK+A
Sbjct: 97  HETGLCKNLLQEYAQKMNYAIPLYQCQKVETLGRVTQFTCTVEIGGIKYTGAATRTKKDA 156

Query: 158 EQLAARAAILSLHEDATN 174
           E  A R A+L++  D  N
Sbjct: 157 EISAGRTALLAIQSDTKN 174

[Close]

BLAST of CSPI03G21780 vs. TAIR 10
Match: AT3G26932.1 (dsRNA-binding protein 3 )

HSP 1 Score: 44.7 bits (104), Expect = 1.7e-04
Identity = 23/67 (34.33%), Postives = 39/67 (58.21%), Query Frame = 0


Query: 104 KSILSEYTDKMGLERPIYTT-KHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARA 163
           K++L E   + GL+ P+YT+ +   G +  F  T+   G+ +  +  +TKK+AE+ AA A
Sbjct: 89  KNLLQETAHRAGLDLPVYTSVRSGPGHIPTFSCTVELAGMSFNGESAKTKKQAEKNAAIA 148

Query: 164 AILSLHE 170
           A  SL +
Sbjct: 149 AWFSLRK 155

[Close]

BLAST of CSPI03G21780 vs. TAIR 10
Match: AT3G26932.2 (dsRNA-binding protein 3 )

HSP 1 Score: 44.7 bits (104), Expect = 1.7e-04
Identity = 23/67 (34.33%), Postives = 39/67 (58.21%), Query Frame = 0


Query: 104 KSILSEYTDKMGLERPIYTT-KHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARA 163
           K++L E   + GL+ P+YT+ +   G +  F  T+   G+ +  +  +TKK+AE+ AA A
Sbjct: 89  KNLLQETAHRAGLDLPVYTSVRSGPGHIPTFSCTVELAGMSFNGESAKTKKQAEKNAAIA 148

Query: 164 AILSLHE 170
           A  SL +
Sbjct: 149 AWFSLRK 155

[Close]

BLAST of CSPI03G21780 vs. TAIR 10
Match: AT5G41070.1 (dsRNA-binding protein 5 )

HSP 1 Score: 43.9 bits (102), Expect = 2.9e-04
Identity = 29/89 (32.58%), Postives = 49/89 (55.06%), Query Frame = 0


Query: 104 KSILSEYTDKMGLERPIYTTKHNQGSVAF--FQSTLVFDGVVYTSDLGRTKKEAEQLAAR 163
           K++L E   + GL+ P+YT+  + GS  F  F  T+   G+ +T +  +TKK+AE+ AA 
Sbjct: 89  KNLLQETAHRAGLDLPMYTSVRS-GSCHFPGFSCTVELAGMTFTGESAKTKKQAEKNAAI 148

Query: 164 AAILSLH-----EDATNPKSQKALGDIIA 186
           AA  SL      +     K Q+A+  +++
Sbjct: 149 AAWSSLKKMSSLDSQDEEKEQEAVARVLS 176

The following BLAST results are available for this feature:

BLAST of CSPI03G21780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6YW64	1.1e-08	37.74	Double-stranded RNA-binding protein 4 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
O04492	3.5e-07	38.46	Double-stranded RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRB1 PE...	[more]
Q0IV63	2.5e-05	39.39	Double-stranded RNA-binding protein 7 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q0IQN6	2.5e-05	39.39	Double-stranded RNA-binding protein 8 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q0DJA3	4.3e-05	39.39	Double-stranded RNA-binding protein 3 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of CSPI03G21780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCN7	2.4e-176	98.77	DRBM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G345370 PE=4 S...	[more]
A0A1S3C485	4.2e-104	86.90	uncharacterized protein LOC103496837 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3C4R2	4.0e-102	86.46	uncharacterized protein LOC103496837 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1F5U3	3.3e-80	73.68	double-stranded RNA-binding protein 4-like isoform X1 OS=Cucurbita moschata OX=3...	[more]
A0A6J1J4E3	7.0e-75	73.49	double-stranded RNA-binding protein 4-like isoform X1 OS=Cucurbita maxima OX=366...	[more]

BLAST of CSPI03G21780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149792.1	5.1e-120	98.25	uncharacterized protein LOC101213863 isoform X1 [Cucumis sativus] >KAE8650625.1 ...	[more]
XP_011651405.1	4.8e-118	97.82	double-stranded RNA-binding protein 4 isoform X2 [Cucumis sativus]	[more]
XP_008457066.1	8.7e-104	86.90	PREDICTED: uncharacterized protein LOC103496837 isoform X1 [Cucumis melo]	[more]
XP_008457067.1	8.2e-102	86.46	PREDICTED: uncharacterized protein LOC103496837 isoform X2 [Cucumis melo]	[more]
XP_038897078.1	1.3e-94	80.43	double-stranded RNA-binding protein 8-like isoform X1 [Benincasa hispida] >XP_03...	[more]

BLAST of CSPI03G21780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09700.1	2.5e-08	38.46	dsRNA-binding domain-like superfamily protein	[more]
AT3G26932.1	1.7e-04	34.33	dsRNA-binding protein 3	[more]
AT3G26932.2	1.7e-04	34.33	dsRNA-binding protein 3	[more]
AT5G41070.1	2.9e-04	32.58	dsRNA-binding protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014720	Double-stranded RNA-binding domain	SMART	SM00358	DRBM_3	coord: 103..168 e-value: 1.8E-7 score: 40.8
IPR014720	Double-stranded RNA-binding domain	PFAM	PF00035	dsrm	coord: 104..167 e-value: 6.8E-11 score: 42.7
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 133..169 score: 9.707684
None	No IPR available	GENE3D	3.30.160.20		coord: 87..172 e-value: 8.1E-18 score: 65.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..72
None	No IPR available	PANTHER	PTHR11207:SF26	DOUBLE-STRANDED RNA-BINDING PROTEIN 4	coord: 74..301
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 98..167
IPR011907	Ribonuclease III	PANTHER	PTHR11207	RIBONUCLEASE III	coord: 74..301

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G21780.1	CSPI03G21780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0016075	rRNA catabolic process
molecular_function	GO:0004525	ribonuclease III activity
molecular_function	GO:0003723	RNA binding