CSPI02G26350 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGGGTAAACACAACGTGTGCATGGCTATTTGCAGCAGGGAATGTGGTTCTAAAGCTTTTGGGTGTAAGAGAAACTGTGTTCGGTATAACAAAGAAAGACACATGTTGTGAGGCAGATTTAGGGGATTTCACTTTTGATGAGTCTCCAATGTTTGTGTCTGGGACAACCATTTTGCTAATCCAACTTATTGCTTTACTAATGAGCTTCATAAGGCAGGTCGGTAGACAAAGGAAATACAGTGCTTGAGATGATTTGTAGCATATGGTTAGTTTTATGCTTTTAGCCCTTTTTAAAGGGAACCTTTATGTTTGGTAAAGAAAGATATGGACTTCCACTCTCCACCATACTCAAGGTCAGCTACCTTAGCATCCTTTTCTCTCTCACGATTTCTGTTCAAGCATCTTCTATTTGTCGATTTCTGTTTGCGTCCATCTCTCCAATCAATTTTTGTTCACCTCTATCTCTCCGTCGTTGTCTCTATCACAACTCCACTTCTGTCGTCTCTTTGTCCATCTTCGTGTCTCTGTCCGTGTGTCTCTGTTCGTGTCCATCGTCCATTTCCCAAGAGTAGTTTATTTTCAGCTTCAATCTCTCAGAGTTGA ATGGGAAGGGTAAACACAACGTGTGCATGGCTATTTGCAGCAGGGAATGTGGTTCTAAAGCTTTTGGGTGTAAGAGAAACTGTGTTCGGTATAACAAAGAAAGACACATGTTGTGAGGCAGATTTAGGGGATTTCACTTTTGATGAGTCTCCAATGTTTGTGTCTGGGACAACCATTTTGCTAATCCAACTTATTGCTTTACTAATGAGCTTCATAAGGCAGAAAGATATGGACTTCCACTCTCCACCATACTCAAGGTCAGCTACCTTAGCATCCTTTTCTCTCTCACGATTTCTGTTCAAGCATCTTCTATTTGTCGATTTCTGTTTGCGTCCATCTCTCCAATCAATTTTTGTTCACCTCTATCTCTCCGTCGTTGTCTCTATCACAACTCCACTTCTGTCGTCTCTTTGTCCATCTTCGTGTCTCTGTCCGTGTGTCTCTGTTCGTGTCCATCGTCCATTTCCCAAGAGTAGTTTATTTTCAGCTTCAATCTCTCAGAGTTGA ATGGGAAGGGTAAACACAACGTGTGCATGGCTATTTGCAGCAGGGAATGTGGTTCTAAAGCTTTTGGGTGTAAGAGAAACTGTGTTCGGTATAACAAAGAAAGACACATGTTGTGAGGCAGATTTAGGGGATTTCACTTTTGATGAGTCTCCAATGTTTGTGTCTGGGACAACCATTTTGCTAATCCAACTTATTGCTTTACTAATGAGCTTCATAAGGCAGAAAGATATGGACTTCCACTCTCCACCATACTCAAGGTCAGCTACCTTAGCATCCTTTTCTCTCTCACGATTTCTGTTCAAGCATCTTCTATTTGTCGATTTCTGTTTGCGTCCATCTCTCCAATCAATTTTTGTTCACCTCTATCTCTCCGTCGTTGTCTCTATCACAACTCCACTTCTGTCGTCTCTTTGTCCATCTTCGTGTCTCTGTCCGTGTGTCTCTGTTCGTGTCCATCGTCCATTTCCCAAGAGTAGTTTATTTTCAGCTTCAATCTCTCAGAGTTGA MGRVNTTCAWLFAAGNVVLKLLGVRETVFGITKKDTCCEADLGDFTFDESPMFVSGTTILLIQLIALLMSFIRQKDMDFHSPPYSRSATLASFSLSRFLFKHLLFVDFCLRPSLQSIFVHLYLSVVVSITTPLLSSLCPSSCLCPCVSVRVHRPFPKSSLFSASISQS* Homology
BLAST of CSPI02G26350 vs. ExPASy Swiss-Prot
Match: O80891 (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=CSLB4 PE=3 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 3.3e-09 Identity = 35/83 (42.17%), Postives = 46/83 (55.42%), Query Frame = 0
BLAST of CSPI02G26350 vs. ExPASy Swiss-Prot
Match: Q8RX83 (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=CSLB3 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 7.5e-09 Identity = 34/82 (41.46%), Postives = 45/82 (54.88%), Query Frame = 0
BLAST of CSPI02G26350 vs. ExPASy Swiss-Prot
Match: Q339N5 (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica OX=39947 GN=CSLH1 PE=2 SV=2) HSP 1 Score: 55.8 bits (133), Expect = 5.3e-07 Identity = 30/75 (40.00%), Postives = 43/75 (57.33%), Query Frame = 0
BLAST of CSPI02G26350 vs. ExPASy Swiss-Prot
Match: Q7XUU0 (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica OX=39947 GN=CSLH3 PE=3 SV=3) HSP 1 Score: 52.4 bits (124), Expect = 5.9e-06 Identity = 27/75 (36.00%), Postives = 43/75 (57.33%), Query Frame = 0
BLAST of CSPI02G26350 vs. ExPASy Swiss-Prot
Match: O80898 (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=CSLB1 PE=2 SV=2) HSP 1 Score: 51.6 bits (122), Expect = 1.0e-05 Identity = 32/82 (39.02%), Postives = 43/82 (52.44%), Query Frame = 0
BLAST of CSPI02G26350 vs. ExPASy TrEMBL
Match: A0A0A0LT74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G416260 PE=4 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 6.0e-86 Identity = 166/168 (98.81%), Postives = 166/168 (98.81%), Query Frame = 0
BLAST of CSPI02G26350 vs. ExPASy TrEMBL
Match: A0A1S4E0S9 (cellulose synthase-like protein H2 OS=Cucumis melo OX=3656 GN=LOC107991432 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 1.6e-25 Identity = 59/73 (80.82%), Postives = 65/73 (89.04%), Query Frame = 0
BLAST of CSPI02G26350 vs. ExPASy TrEMBL
Match: A0A0A0LQD3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G416240 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 7.7e-25 Identity = 59/73 (80.82%), Postives = 64/73 (87.67%), Query Frame = 0
BLAST of CSPI02G26350 vs. ExPASy TrEMBL
Match: A0A1S3C244 (cellulose synthase-like protein H2 OS=Cucumis melo OX=3656 GN=LOC103495982 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 9.4e-23 Identity = 57/74 (77.03%), Postives = 62/74 (83.78%), Query Frame = 0
BLAST of CSPI02G26350 vs. ExPASy TrEMBL
Match: A0A0A0LMT9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G416250 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 8.0e-22 Identity = 56/74 (75.68%), Postives = 61/74 (82.43%), Query Frame = 0
BLAST of CSPI02G26350 vs. NCBI nr
Match: XP_016901847.1 (PREDICTED: cellulose synthase-like protein H2 [Cucumis melo]) HSP 1 Score: 125.9 bits (315), Expect = 3.2e-25 Identity = 59/73 (80.82%), Postives = 65/73 (89.04%), Query Frame = 0
BLAST of CSPI02G26350 vs. NCBI nr
Match: XP_038902791.1 (cellulose synthase-like protein H1 isoform X1 [Benincasa hispida]) HSP 1 Score: 125.2 bits (313), Expect = 5.5e-25 Identity = 62/73 (84.93%), Postives = 65/73 (89.04%), Query Frame = 0
BLAST of CSPI02G26350 vs. NCBI nr
Match: XP_038902792.1 (cellulose synthase-like protein H1 isoform X2 [Benincasa hispida]) HSP 1 Score: 125.2 bits (313), Expect = 5.5e-25 Identity = 62/73 (84.93%), Postives = 65/73 (89.04%), Query Frame = 0
BLAST of CSPI02G26350 vs. NCBI nr
Match: XP_038900388.1 (cellulose synthase-like protein H1 isoform X1 [Benincasa hispida]) HSP 1 Score: 125.2 bits (313), Expect = 5.5e-25 Identity = 62/73 (84.93%), Postives = 65/73 (89.04%), Query Frame = 0
BLAST of CSPI02G26350 vs. NCBI nr
Match: XP_038900389.1 (cellulose synthase-like protein H1 isoform X2 [Benincasa hispida]) HSP 1 Score: 125.2 bits (313), Expect = 5.5e-25 Identity = 62/73 (84.93%), Postives = 65/73 (89.04%), Query Frame = 0
BLAST of CSPI02G26350 vs. TAIR 10
Match: AT2G32540.1 (cellulose synthase-like B4 ) HSP 1 Score: 63.2 bits (152), Expect = 2.4e-10 Identity = 35/83 (42.17%), Postives = 46/83 (55.42%), Query Frame = 0
BLAST of CSPI02G26350 vs. TAIR 10
Match: AT2G32530.1 (cellulose synthase-like B3 ) HSP 1 Score: 62.0 bits (149), Expect = 5.3e-10 Identity = 34/82 (41.46%), Postives = 45/82 (54.88%), Query Frame = 0
BLAST of CSPI02G26350 vs. TAIR 10
Match: AT2G32610.1 (cellulose synthase-like B1 ) HSP 1 Score: 51.6 bits (122), Expect = 7.2e-07 Identity = 32/82 (39.02%), Postives = 43/82 (52.44%), Query Frame = 0
BLAST of CSPI02G26350 vs. TAIR 10
Match: AT4G15290.1 (Cellulose synthase family protein ) HSP 1 Score: 50.4 bits (119), Expect = 1.6e-06 Identity = 43/144 (29.86%), Postives = 63/144 (43.75%), Query Frame = 0
BLAST of CSPI02G26350 vs. TAIR 10
Match: AT2G32620.1 (cellulose synthase-like B ) HSP 1 Score: 44.7 bits (104), Expect = 8.8e-05 Identity = 28/86 (32.56%), Postives = 44/86 (51.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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