CSPI02G25570 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI02G25570
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr2: 21717413 .. 21717821 (-)
RNA-Seq ExpressionCSPI02G25570
SyntenyCSPI02G25570
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTTGCCTCTAAAAGGGAATTGGGAGAAATGGGTGGGACAAAACACAGCGCAGGAGGTGAGAAATGGGAATGATAACGTGGGGTCGATTGATAGGAAATGGGGTGGCAAAATAAAAATGGTTGTTTATGATAATTAATTAGAAAAATCTCCATCATAGCGGTTGGCGATTCATCACTGCCCTGCGTTCTGTTATGCACGATACACAAGAAAGTAGGAGTTGGGGATATGGCTATGGGTGTGGCCTGTGGTGGCTATGGCGATTCGAATTAGAAGACGACAACGAAGCAAAATTAATTAAAGGAAAATCATCTTCTTCCTTCAAGAGTTATTACTATTTTGATTTTATTCCATTTGGGAATCGAATGGTGATCCAACTCCAAACGTTTTTTCCTTTTGAAGTTTAA

mRNA sequence

ATGGGGTTGCCTCTAAAAGGGAATTGGGAGAAATGGGTGGGACAAAACACAGCGCAGGAGAAAAATCTCCATCATAGCGGTTGGCGATTCATCACTGCCCTGCGTTCTGTTATGCACGATACACAAGAAAGTAGGAGTTGGGGATATGGCTATGGGTGTGGCCTGTGGTGGCTATGGCGATTCGAATTAGAAGACGACAACGAAGCAAAATTAATTAAAGGAAAATCATCTTCTTCCTTCAAGAGTTATTACTATTTTGATTTTATTCCATTTGGGAATCGAATGGTGATCCAACTCCAAACGTTTTTTCCTTTTGAAGTTTAA

Coding sequence (CDS)

ATGGGGTTGCCTCTAAAAGGGAATTGGGAGAAATGGGTGGGACAAAACACAGCGCAGGAGAAAAATCTCCATCATAGCGGTTGGCGATTCATCACTGCCCTGCGTTCTGTTATGCACGATACACAAGAAAGTAGGAGTTGGGGATATGGCTATGGGTGTGGCCTGTGGTGGCTATGGCGATTCGAATTAGAAGACGACAACGAAGCAAAATTAATTAAAGGAAAATCATCTTCTTCCTTCAAGAGTTATTACTATTTTGATTTTATTCCATTTGGGAATCGAATGGTGATCCAACTCCAAACGTTTTTTCCTTTTGAAGTTTAA

Protein sequence

MGLPLKGNWEKWVGQNTAQEKNLHHSGWRFITALRSVMHDTQESRSWGYGYGCGLWWLWRFELEDDNEAKLIKGKSSSSFKSYYYFDFIPFGNRMVIQLQTFFPFEV*
Homology
[Close]
BLAST of CSPI02G25570 vs. ExPASy TrEMBL
Match: A0A0A0LMX9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406120 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 4.3e-21
Identity = 50/56 (89.29%), Postives = 50/56 (89.29%), Query Frame = 0 

Query: 1  MGLPLKGNWEKWVGQNTAQEKNLHHSGWRFITALRSVMHDTQESRSW--GYGYGCG 55
          MGLPLKGNWEKWVGQNTAQEKNLHHSGWRFITALRSVMHDTQESRSW    G  CG
Sbjct: 1  MGLPLKGNWEKWVGQNTAQEKNLHHSGWRFITALRSVMHDTQESRSWDMAMGVACG 56

[Close]
BLAST of CSPI02G25570 vs. NCBI nr
Match: KGN63163.1 (hypothetical protein Csa_022365 [Cucumis sativus])

HSP 1 Score: 110.5 bits (275), Expect = 8.9e-21
Identity = 50/56 (89.29%), Postives = 50/56 (89.29%), Query Frame = 0 

Query: 1  MGLPLKGNWEKWVGQNTAQEKNLHHSGWRFITALRSVMHDTQESRSW--GYGYGCG 55
          MGLPLKGNWEKWVGQNTAQEKNLHHSGWRFITALRSVMHDTQESRSW    G  CG
Sbjct: 1  MGLPLKGNWEKWVGQNTAQEKNLHHSGWRFITALRSVMHDTQESRSWDMAMGVACG 56

The following BLAST results are available for this feature:
BLAST of CSPI02G25570 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI02G25570 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LMX94.3e-2189.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406120 PE=4 SV=1[more]
BLAST of CSPI02G25570 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63163.18.9e-2189.29hypothetical protein Csa_022365 [Cucumis sativus][more]
BLAST of CSPI02G25570 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G25570.1CSPI02G25570.1mRNA