CSPI02G24120 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI02G24120
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTranscription initiation factor TFIID subunit 10
LocationChr2: 20688166 .. 20691697 (+)
RNA-Seq ExpressionCSPI02G24120
SyntenyCSPI02G24120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCTTGATTTCGAAGAGAGGGAAAAATATAACGGAGAAGAAGAGCAAGAAGAAGATGAACCATAACCAACAAGCGACGGGGAGCAGGCACGACGATGATGCAGCGCTATCCGAGTTCTTAGCTTCTCTAATGGAGTATACTCCCACTGTAAGATCTATTTTCCATGCTTCTTAACCCCAGTTCGCTTCTCTCTCTCCACTCGTTTATCTGCAAGTTCAAATCATGCCGCTGTTGGTTTTTTTTGGGGCTATCGTTTTACAGATTCCCGATGAGTTGGTGGAGCATTACTTAGGAAAGAGTGGATTTCAGTGTCCCGACGTTCGATTGTAGGTACCTTTTTGTTTGGTTTTTATATATTTTTGTTCATCAAAACCCTAGGTCCAAAAACGCGGGTTTTCGACCGATAGATGAGATGGGTATATCTCTCTTAATGTTTTTAGTGGTTCTGCTTTCTTTTCACAATTTGATCGTACTTGGAGAGTTTTTCATTCAATTGGTTGGTTCTTGACGGTTGAAATCGATCGAAGTGAAGCTTAATTAAGGAATTTTTTATTTTGTGTTTTTTTTCTTTTAAACAGACCATGTTCGTCATAGTTGCTGATTTTTTTTTTTTTTTTGTTGAGAAGTTGCCTGTACATTGCTCAATCTCTATGAACCGAGGATGAGACTGAAGGAGCATTTTTTTTTAAAAAAAATAAAAATAAATAAATCACTGTTCTTCTCTAACGATTCTTCTTCTCTTTTCTACCACTTCATTTTCTACTTTTTCCACCCGAATTTTGAAAAACGGAGAAGATATTAGTCATTTGATATGATTATTGTGGTTTAAGGCAAAGTGATACCCAGTTTTTATTAGCTTTAAATGCTTTCACGATGATATGTGATGTTTGTAATTAGATACTGGAATTTCTGTTTTTTTTGTGAAAATCAGTTTACATTGTTCTTATAGGGCTTCATTTTTGTAGGATCAGGCTTGTCGCTGTTGCCACACAGAAGTTCGTTGCGGATGTTGCAAGTGATGCTCTCCAGTATGCTTTCTTTCTTCCCCCATTTTTCCTATGAAGTGCTAGTAGGATATGGTCATTACTTGGTTGGAGACCTTATAAAAAAGAGCTTGAGTTGCAAACTCTTCTTTTTAATTTCATAATTTGACTGAGTTTGAGGACGAATTTTCTGAAAACAATGCTATGCTACAGAATATTCCTTTTGATTGTTTTACGAGCACGACTGACAAATCAACCACTTAGCTCTTTTCTCTTAAAGCAAAAAGAAAGGCCCTAATACACAGCGGTTATTGCATGACATGTGATAGCTGTCTCTCACTTCCAAAGATGAGACCCTTATTCCTACTGAAATTTTCTTCCAAAAAAATCGTTTACAATCCTTTCTACTTGGACCACAAGGACTAAGATATTCTTAACAAGGATAGAAAATAGATAGGGATCCCACACCACTAAAGGCTAGGTTTCGAGAGTTTACTACCCTTAAAAGTTTTCAGCCTGAGCAAGACATGAAGATTTGCCTGGTTGTGGGCAGTAGTAAAATGGCTTGATCCAAAGTGTGCGACTCAACTCTAAGTACTTCTATTTCGACGGTCATCCCAAATGGCCTTACTGAAAGTTGTAATAGTGGTTTCCTTGGTCACATTATTCTTCATCAACGAATTGGGGTTAATCTCCTTATCTTTCAAAGGTTAGTCAATAATCAATTCCCTTTATTGGAACCTCTTTCAGCTCTGTCTTTGAAGATCTTGGAAAATGCTGGTCTCCCACCCTTCGAGAACAAGACTTTCACCAATCTCCCCTAAAAGATTGGTACTCCTAAATTTACCATGGAAATTATGAACCTCACAGCTGAATGTACAATTTTACTTGTCAAGATTATCAGGATTTTAAGAAGAGACTTACTGGACCGTTCTCACTGTATATTCAATGATTAGCACAATATAACAAACAGTTATTAGAGGAACAAATCACTCTTAGTAATCCTCTACAGCTACCCTCATGCACCTATTAAATTTTTGTTTGTTGACTGATTTGATTTGTTTTATTGAGTTGATTCACTCTCACACAACCTATTAAGGATTTTTTTAAAGAAAATATGTTCTTATTCTTATTTATTTATGTTAAAATCAATATTTTTCTTGATTGCTTTCTTTAGTTGGCCTCATATTTTGTGGCCTACGTTTTTGTTTGTTCCTTTTTTTTGTATGCCATTTTTCTCAATAAAATTTCAATATCTGATTAAAAAAAACTTATTTTCTTGTGCAATGTAGGCATTGTAAGGCAAGACAGGCAGCAGTAGTGAAAGACAAAAGGGATAAACAACAAAAGGTGCATTTTTTGTAACTCAGGGTCTCTTGATTGATAAATTATTTGGCCAGTCTAACATTATACTGGTTCAGGATAAGCGCTTAATATTGACTATGGATGATCTTTCAAAGGCACTTCGTGAGGTAAGCTCGAAATGTTATTTACTTGTCATCAAGCTCTTGTGCTTGCTATGGTTGATTCATATGCCGCAGATATAAGAGATCATTAGTTTCATTTTGTCATATACTCTCATTTTTAGGTGGTACTAGGGGGGTTGATTATGGGTAGGTTGTGTGAAATTATCGATGTCACTTAAGGCTTCAAAGTTGATGCTGGCCGGGGGCGGGGAGTTCTTGTAATAGTGGTGATCTATCATAAAGTTTGTCTGCCTTGTTTGTGTAATAAATTCGTGTCAGGATGTAATCTTTTATAGAATTTGTGATTTTTAGTTTTTCTAATTGTATGATGCACATCCTCAACATTATAATACAGTTTCCACTCGGCAGGGAATCTTTAATGTGCATGTTCTCATTTTATGACCATCACTTTGGAAATGATTACGTTTTGAACATAGACACTTGGTAATCTAGTCGCTTATCCATAACTAACCGCCTTGTTGGTACTTGATGAACAGTATGGCGTCAATGTGAAACATCAAGAATACTTTGCTGATAGCCCTTCAACGGGAGTGGATTCTACTTCCAGAGAGGAATGAGTTGGAGTAACGGTTAAAATGTCTCATGGTTGTTTATGTCGTGAATATACTGAATTACTGATGGATAGCGTTCAGGGTTGGAGTATTTCTGGCTGACTCTGCAGCTAAATTTAGTCCCTGCCATGCAGTCATCATGAGTCATGTTGTACATTATGGCATTGCTTTGAAAATCAAAATTAAGTAGCTGTGTTTTCCTACTTTACATAGCAAGGCCTCAACCTTTTTGAACTGTCAAAGCGGTAGATATGTTCGGCATTTTCTACTTGTCTATTGAATGAAACTGTGCATAATGAAAATCGTAACATCATTCTTGTTCGTACAAGGTTGTGTATTGATGGCTGATCCACATCTGTCAGTGACCAGAACGCATTTTCTGTAGATTTCAACTTCAGTTTATTTTTATTTGTTTCTGACTACGACTTTTCTGTTGATTCTGAATGGCATATACAATTCACTTGCCAGGTTTATGACAAAATGGTTCTTTGTTTAATCTTTCCATCGCCAA

mRNA sequence

AGCTTGATTTCGAAGAGAGGGAAAAATATAACGGAGAAGAAGAGCAAGAAGAAGATGAACCATAACCAACAAGCGACGGGGAGCAGGCACGACGATGATGCAGCGCTATCCGAGTTCTTAGCTTCTCTAATGGAGTATACTCCCACTATTCCCGATGAGTTGGTGGAGCATTACTTAGGAAAGAGTGGATTTCAGTGTCCCGACGTTCGATTGATCAGGCTTGTCGCTGTTGCCACACAGAAGTTCGTTGCGGATGTTGCAAGTGATGCTCTCCAGCATTGTAAGGCAAGACAGGCAGCAGTAGTGAAAGACAAAAGGGATAAACAACAAAAGGATAAGCGCTTAATATTGACTATGGATGATCTTTCAAAGGCACTTCGTGAGTATGGCGTCAATGTGAAACATCAAGAATACTTTGCTGATAGCCCTTCAACGGGAGTGGATTCTACTTCCAGAGAGGAATGAGTTGGAGTAACGGTTAAAATGTCTCATGGTTGTTTATGTCGTGAATATACTGAATTACTGATGGATAGCGTTCAGGGTTGGAGTATTTCTGGCTGACTCTGCAGCTAAATTTAGTCCCTGCCATGCAGTCATCATGAGTCATGTTGTACATTATGGCATTGCTTTGAAAATCAAAATTAAGTAGCTGTGTTTTCCTACTTTACATAGCAAGGCCTCAACCTTTTTGAACTGTCAAAGCGGTAGATATGTTCGGCATTTTCTACTTGTCTATTGAATGAAACTGTGCATAATGAAAATCGTAACATCATTCTTGTTCGTACAAGGTTGTGTATTGATGGCTGATCCACATCTGTCAGTGACCAGAACGCATTTTCTGTAGATTTCAACTTCAGTTTATTTTTATTTGTTTCTGACTACGACTTTTCTGTTGATTCTGAATGGCATATACAATTCACTTGCCAGGTTTATGACAAAATGGTTCTTTGTTTAATCTTTCCATCGCCAA

Coding sequence (CDS)

ATGAACCATAACCAACAAGCGACGGGGAGCAGGCACGACGATGATGCAGCGCTATCCGAGTTCTTAGCTTCTCTAATGGAGTATACTCCCACTATTCCCGATGAGTTGGTGGAGCATTACTTAGGAAAGAGTGGATTTCAGTGTCCCGACGTTCGATTGATCAGGCTTGTCGCTGTTGCCACACAGAAGTTCGTTGCGGATGTTGCAAGTGATGCTCTCCAGCATTGTAAGGCAAGACAGGCAGCAGTAGTGAAAGACAAAAGGGATAAACAACAAAAGGATAAGCGCTTAATATTGACTATGGATGATCTTTCAAAGGCACTTCGTGAGTATGGCGTCAATGTGAAACATCAAGAATACTTTGCTGATAGCCCTTCAACGGGAGTGGATTCTACTTCCAGAGAGGAATGA

Protein sequence

MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE*
Homology
[Close]
BLAST of CSPI02G24120 vs. ExPASy Swiss-Prot
Match: O04173 (Transcription initiation factor TFIID subunit 10 OS=Arabidopsis thaliana OX=3702 GN=TAF10 PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 4.1e-58
Identity = 113/136 (83.09%), Postives = 125/136 (91.91%), Query Frame = 0 

Query: 1   MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNH QQ+  ++H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHGQQSGEAKHEDDAALTEFLASLMDYTPTIPDDLVEHYLAKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKAR A VVKDK  KQQKDKRL+LTM+DLSKALREYGVNVKH EY
Sbjct: 61  TQKFVADVASDALQHCKARPAPVVKDK--KQQKDKRLVLTMEDLSKALREYGVNVKHPEY 120

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTG+D  +R+E
Sbjct: 121 FADSPSTGMDPATRDE 134

[Close]
BLAST of CSPI02G24120 vs. ExPASy Swiss-Prot
Match: Q12962 (Transcription initiation factor TFIID subunit 10 OS=Homo sapiens OX=9606 GN=TAF10 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 5.6e-23
Identity = 51/104 (49.04%), Postives = 74/104 (71.15%), Query Frame = 0 

Query: 18  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCK 77
           L +FL  L +YTPTIPD +  +YL ++GF+  D R+IRL+++A QKF++D+A+DALQHCK
Sbjct: 116 LVDFLMQLEDYTPTIPDAVTGYYLNRAGFEASDPRIIRLISLAAQKFISDIANDALQHCK 175

Query: 78  ARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEYF 122
            +  A    +   + KD++  LTM+DL+ AL EYG+NVK   YF
Sbjct: 176 MKGTASGSSR--SKSKDRKYTLTMEDLTPALSEYGINVKKPHYF 217

[Close]
BLAST of CSPI02G24120 vs. ExPASy Swiss-Prot
Match: Q8K0H5 (Transcription initiation factor TFIID subunit 10 OS=Mus musculus OX=10090 GN=Taf10 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 5.6e-23
Identity = 51/104 (49.04%), Postives = 74/104 (71.15%), Query Frame = 0 

Query: 18  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCK 77
           L +FL  L +YTPTIPD +  +YL ++GF+  D R+IRL+++A QKF++D+A+DALQHCK
Sbjct: 116 LVDFLMQLEDYTPTIPDAVTGYYLNRAGFEASDPRIIRLISLAAQKFISDIANDALQHCK 175

Query: 78  ARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEYF 122
            +  A    +   + KD++  LTM+DL+ AL EYG+NVK   YF
Sbjct: 176 MKGTASGSSR--SKSKDRKYTLTMEDLTPALSEYGINVKKPHYF 217

[Close]
BLAST of CSPI02G24120 vs. ExPASy Swiss-Prot
Match: Q9XZT7 (Transcription initiation factor TFIID subunit 10b OS=Drosophila melanogaster OX=7227 GN=Taf10b PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 9.9e-20
Identity = 50/126 (39.68%), Postives = 75/126 (59.52%), Query Frame = 0 

Query: 2   NHNQQATG------SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIR 61
           +H Q + G       R    + LS+F++ L +YTP IPD +  HYL   GFQ  D R++R
Sbjct: 19  SHGQSSGGGGGGDRDRTTPSSHLSDFMSQLEDYTPLIPDAVTSHYLNMGGFQSDDKRIVR 78

Query: 62  LVAVATQKFVADVASDALQHCKAR-QAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVN 121
           L+++A QK+++D+  DALQH KAR            + KD++  LTM+DL  AL +YG+N
Sbjct: 79  LISLAAQKYMSDIIDDALQHSKARTHMQTTNTPGGSKAKDRKFTLTMEDLQPALADYGIN 138

[Close]
BLAST of CSPI02G24120 vs. ExPASy Swiss-Prot
Match: Q9U5W9 (Transcription initiation factor TFIID subunit 10 OS=Drosophila melanogaster OX=7227 GN=Taf10 PE=1 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 5.5e-18
Identity = 44/114 (38.60%), Postives = 71/114 (62.28%), Query Frame = 0 

Query: 14  DDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDAL 73
           +++ + E +  L +Y+PTIPD L  H L  +GF   D +++RLV+V+ QKF++D+A+DAL
Sbjct: 53  EESEMDELIKQLEDYSPTIPDALTMHILKTAGFCTVDPKIVRLVSVSAQKFISDIANDAL 112

Query: 74  QHCKARQAAV------VKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEYF 122
           QHCK R   +         K  K  KD++  L M+DL  AL ++G+ ++  +YF
Sbjct: 113 QHCKTRTTNIQHSSGHSSSKDKKNPKDRKYTLAMEDLVPALADHGITMRKPQYF 166

[Close]
BLAST of CSPI02G24120 vs. ExPASy TrEMBL
Match: A0A0A0LPV6 (Transcription initiation factor TFIID subunit 10 OS=Cucumis sativus OX=3659 GN=Csa_2G383360 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.2e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0 

Query: 1   MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY
Sbjct: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTGVDSTSREE
Sbjct: 121 FADSPSTGVDSTSREE 136

[Close]
BLAST of CSPI02G24120 vs. ExPASy TrEMBL
Match: A0A6J1KB50 (Transcription initiation factor TFIID subunit 10 OS=Cucurbita maxima OX=3661 GN=LOC111492283 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.6e-68
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 0 

Query: 1   MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNH+QQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY
Sbjct: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTGVDSTSREE
Sbjct: 121 FADSPSTGVDSTSREE 136

[Close]
BLAST of CSPI02G24120 vs. ExPASy TrEMBL
Match: A0A6J1HHI7 (Transcription initiation factor TFIID subunit 10 OS=Cucurbita moschata OX=3662 GN=LOC111462992 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.6e-68
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 0 

Query: 1   MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNH+QQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY
Sbjct: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTGVDSTSREE
Sbjct: 121 FADSPSTGVDSTSREE 136

[Close]
BLAST of CSPI02G24120 vs. ExPASy TrEMBL
Match: A0A1S3BD75 (Transcription initiation factor TFIID subunit 10 OS=Cucumis melo OX=3656 GN=LOC103488368 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67
Identity = 134/136 (98.53%), Postives = 136/136 (100.00%), Query Frame = 0 

Query: 1   MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNH+QQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTM+DLSKALREYGVNVKHQEY
Sbjct: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTGVDSTSREE
Sbjct: 121 FADSPSTGVDSTSREE 136

[Close]
BLAST of CSPI02G24120 vs. ExPASy TrEMBL
Match: A0A6J1BVJ5 (Transcription initiation factor TFIID subunit 10 OS=Momordica charantia OX=3673 GN=LOC111005104 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.1e-64
Identity = 128/136 (94.12%), Postives = 132/136 (97.06%), Query Frame = 0 

Query: 1   MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNH+QQ T  RHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQA++VKDKRDKQQKDKRLILTM+DLSKALREYGVNVKHQEY
Sbjct: 61  TQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTGVD TSREE
Sbjct: 121 FADSPSTGVDPTSREE 136

[Close]
BLAST of CSPI02G24120 vs. NCBI nr
Match: XP_004138687.1 (transcription initiation factor TFIID subunit 10 [Cucumis sativus])

HSP 1 Score: 268.9 bits (686), Expect = 2.5e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0 

Query: 1   MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY
Sbjct: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTGVDSTSREE
Sbjct: 121 FADSPSTGVDSTSREE 136

[Close]
BLAST of CSPI02G24120 vs. NCBI nr
Match: KAG6598532.1 (Transcription initiation factor TFIID subunit 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 266.9 bits (681), Expect = 9.4e-68
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 0 

Query: 1   MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNH+QQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 292 MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 351

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY
Sbjct: 352 TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 411

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTGVDSTSREE
Sbjct: 412 FADSPSTGVDSTSREE 427

[Close]
BLAST of CSPI02G24120 vs. NCBI nr
Match: XP_022962589.1 (transcription initiation factor TFIID subunit 10 [Cucurbita moschata] >XP_022997339.1 transcription initiation factor TFIID subunit 10 [Cucurbita maxima] >XP_023547186.1 transcription initiation factor TFIID subunit 10 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.9 bits (681), Expect = 9.4e-68
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 0 

Query: 1   MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNH+QQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY
Sbjct: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTGVDSTSREE
Sbjct: 121 FADSPSTGVDSTSREE 136

[Close]
BLAST of CSPI02G24120 vs. NCBI nr
Match: XP_008445293.1 (PREDICTED: transcription initiation factor TFIID subunit 10 isoform X1 [Cucumis melo])

HSP 1 Score: 265.4 bits (677), Expect = 2.7e-67
Identity = 134/136 (98.53%), Postives = 136/136 (100.00%), Query Frame = 0 

Query: 1   MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNH+QQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTM+DLSKALREYGVNVKHQEY
Sbjct: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTGVDSTSREE
Sbjct: 121 FADSPSTGVDSTSREE 136

[Close]
BLAST of CSPI02G24120 vs. NCBI nr
Match: XP_038886703.1 (transcription initiation factor TFIID subunit 10 isoform X1 [Benincasa hispida])

HSP 1 Score: 265.4 bits (677), Expect = 2.7e-67
Identity = 134/136 (98.53%), Postives = 136/136 (100.00%), Query Frame = 0 

Query: 1   MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNH+QQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 20  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 79

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTM+DLSKALREYGVNVKHQEY
Sbjct: 80  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 139

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTGVDSTSREE
Sbjct: 140 FADSPSTGVDSTSREE 155

[Close]
BLAST of CSPI02G24120 vs. TAIR 10
Match: AT4G31720.2 (TBP-associated factor II 15 )

HSP 1 Score: 225.3 bits (573), Expect = 2.9e-59
Identity = 113/136 (83.09%), Postives = 125/136 (91.91%), Query Frame = 0 

Query: 1   MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNH QQ+  ++H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHGQQSGEAKHEDDAALTEFLASLMDYTPTIPDDLVEHYLAKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKAR A VVKDK  KQQKDKRL+LTM+DLSKALREYGVNVKH EY
Sbjct: 61  TQKFVADVASDALQHCKARPAPVVKDK--KQQKDKRLVLTMEDLSKALREYGVNVKHPEY 120

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTG+D  +R+E
Sbjct: 121 FADSPSTGMDPATRDE 134

[Close]
BLAST of CSPI02G24120 vs. TAIR 10
Match: AT4G31720.1 (TBP-associated factor II 15 )

HSP 1 Score: 225.3 bits (573), Expect = 2.9e-59
Identity = 113/136 (83.09%), Postives = 125/136 (91.91%), Query Frame = 0 

Query: 1   MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNH QQ+  ++H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHGQQSGEAKHEDDAALTEFLASLMDYTPTIPDDLVEHYLAKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKAR A VVKDK  KQQKDKRL+LTM+DLSKALREYGVNVKH EY
Sbjct: 61  TQKFVADVASDALQHCKARPAPVVKDK--KQQKDKRLVLTMEDLSKALREYGVNVKHPEY 120

Query: 121 FADSPSTGVDSTSREE 137
           FADSPSTG+D  +R+E
Sbjct: 121 FADSPSTGMDPATRDE 134

The following BLAST results are available for this feature:
BLAST of CSPI02G24120 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O041734.1e-5883.09Transcription initiation factor TFIID subunit 10 OS=Arabidopsis thaliana OX=3702... [more]
Q129625.6e-2349.04Transcription initiation factor TFIID subunit 10 OS=Homo sapiens OX=9606 GN=TAF1... [more]
Q8K0H55.6e-2349.04Transcription initiation factor TFIID subunit 10 OS=Mus musculus OX=10090 GN=Taf... [more]
Q9XZT79.9e-2039.68Transcription initiation factor TFIID subunit 10b OS=Drosophila melanogaster OX=... [more]
Q9U5W95.5e-1838.60Transcription initiation factor TFIID subunit 10 OS=Drosophila melanogaster OX=7... [more]
BLAST of CSPI02G24120 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPV61.2e-68100.00Transcription initiation factor TFIID subunit 10 OS=Cucumis sativus OX=3659 GN=C... [more]
A0A6J1KB504.6e-6899.26Transcription initiation factor TFIID subunit 10 OS=Cucurbita maxima OX=3661 GN=... [more]
A0A6J1HHI74.6e-6899.26Transcription initiation factor TFIID subunit 10 OS=Cucurbita moschata OX=3662 G... [more]
A0A1S3BD751.3e-6798.53Transcription initiation factor TFIID subunit 10 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1BVJ51.1e-6494.12Transcription initiation factor TFIID subunit 10 OS=Momordica charantia OX=3673 ... [more]
BLAST of CSPI02G24120 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004138687.12.5e-68100.00transcription initiation factor TFIID subunit 10 [Cucumis sativus][more]
KAG6598532.19.4e-6899.26Transcription initiation factor TFIID subunit 10, partial [Cucurbita argyrosperm... [more]
XP_022962589.19.4e-6899.26transcription initiation factor TFIID subunit 10 [Cucurbita moschata] >XP_022997... [more]
XP_008445293.12.7e-6798.53PREDICTED: transcription initiation factor TFIID subunit 10 isoform X1 [Cucumis ... [more]
XP_038886703.12.7e-6798.53transcription initiation factor TFIID subunit 10 isoform X1 [Benincasa hispida][more]
BLAST of CSPI02G24120 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G31720.22.9e-5983.09TBP-associated factor II 15 [more]
AT4G31720.12.9e-5983.09TBP-associated factor II 15 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003923Transcription initiation factor TFIID, 23-30kDa subunitPRINTSPR01443TFIID30KDSUBcoord: 32..54
score: 64.35
coord: 78..100
score: 54.78
coord: 12..28
score: 50.59
IPR003923Transcription initiation factor TFIID, 23-30kDa subunitPFAMPF03540TFIID_30kDacoord: 14..61
e-value: 2.9E-23
score: 81.6
IPR003923Transcription initiation factor TFIID, 23-30kDa subunitPANTHERPTHR21242TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 10coord: 14..103
IPR003923Transcription initiation factor TFIID, 23-30kDa subunitCDDcd07982TAF10coord: 14..103
e-value: 2.1221E-48
score: 148.528

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G24120.1CSPI02G24120.1mRNA
CSPI02G24120.2CSPI02G24120.2mRNA
CSPI02G24120.3CSPI02G24120.3mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016573 histone acetylation
biological_process GO:0006367 transcription initiation from RNA polymerase II promoter
biological_process GO:0006413 translational initiation
biological_process GO:0006352 DNA-templated transcription, initiation
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0000124 SAGA complex
cellular_component GO:0005669 transcription factor TFIID complex
cellular_component GO:0005634 nucleus
molecular_function GO:1990841 promoter-specific chromatin binding
molecular_function GO:0016251 RNA polymerase II general transcription initiation factor activity
molecular_function GO:0003743 translation initiation factor activity