CSPI02G17420 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G17420
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Coilin
Location	Chr2: 16458854 .. 16463531 (+)
RNA-Seq Expression	CSPI02G17420
Synteny	CSPI02G17420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCAGTCTTAGTTGCTTTGCTGCTGGAGGATTCTTCGGATGATCAATGAATTCGGGGACTGTGAGAATACGTTTGCTTTTCGAACAGGGGCAGCTACTGAGCAAGTCTCACAGGAAAAATGGACTCAAACGGAGTTGGATTCTTCTCAAATCTCATCTCCCTACCATTTCCGACTTCTCTTCCTATCTTCTTGATTACTTCTTCCTTCGTACTGCTTGCCCTCATGGCCTCATTCTTTCTGTAAGTTCGTCTCTCAACCTTTCTGGCTGTCCAATGTGGGGGTCTCATTTTTACATGCACTTTATGTTAGAGAGGAGAGGGAGGACTTTGGAATTCATCAAACAATCTTGGGTCTTTCAGATAGATTAACTTCCCTTCTCCTGAATGCACTTCACTGTGAATGTCATGTATGCATGCTTAACTTGTCTTTTCCCTCTCACAGATGGATGGCTTTGTTCTACCTCCTTTTGAACCTACTTCTATTTTGAAGGATAAAGATATTGTTAGGTTAGTTTGTGGGCCGCATTTCCTCTTTCAATACTTCGTCTCTATAAGACCAGGTGTCCCAGTTTGCCGCATTGTTCTTCTAACAGGGTTAAGAAGAATGTGGACAATGTGGCTGCGGCTGACAAGATGGAAGAGCTTGTGAACAAGTGCACTGACTACAAAAATGAAGCAGATGCAGTTGATGAACCTTATGAACTTCTGCGTCAGTTGGAAGACACTTTGGATGCGGGAAGCGTCAAGAAAACACTTTCCAGCAAGAGGAAGGCACTGAAAACACTTCACAGTTCAAAGTACGTAGCACCAATATCTGTCATTGCAGATGCTTAAGAATCGCATAGCGTTAATTTTTATGAGCAGACAACATTTCAATGTTCAAACACCATGTTCTTGAAGGGACTTGAAACCTAATGGTCCCTTGGTGCTTATATGTTGCTTTTGTTTATGGCAGTTGCTTCAATGTGAATGGTACCAGTTTATAAAATGCCATTTATGGTTCCAGTAGGATTCGGAAGTGATTTTAAATTTCTATATTATTCGATACCTTTGTAAACAAGATTCTGAAGTTGGTAAAAGAAGAACCAGGATGTAAGTGTCACGTACTTGTTAGTTCTTGCTGTTTAAGGGTTAGTTATCGTAACTATATACTTAAGTTTGAATAAGTTGCGTTGAAAACGTGGTTCTGACTCACTGGTAACATCACACCTCGACCATGCGAGGTTTGTGAACTAATACAAGTCAGAATGATGTTGAATTTTATTTTATTCCCAACCCATGGTTTTCAGGTGACACCATCTCTTTCTAGTCTCCATATCAGGTATATATATGGTCGGTATCCACATACTAGTTTTAGGACAATTTTCATTTTGTTTGACGAAGTTTCATTTCATATTGCATGGTTGTACCTTGTAAGAATTGTCTTATGCGTATTCATGTTTCTTATTATTCTGTCCAACTTGTAGGATGAAGAAAAAAAGAGTTGTTCCAACTTCCAAATATTTGAAGTTTCGTACAGAGCATAATGGTAGATTCCAGCACAAAGTTCTTTCTGAAAAGAGTCTGGTCGAGAAGCACAAATCATCCAGCGGTCATACCGATACAAGTATCTCCAACGAGCAAAAGGCTAGTGAAGTTTATTTGGCCAGCGTAGTTCAATTAATAGAAGGGTCTTTGTTTTATTAATTTTTGGAGATGAAGTATGGAAAGATCGATCCTTGTCTCAACCCCAACTATATGAATCTCTGACAATGTCCTCATTCCCATAATCAATCTTTATTTAAACTTTTAGAGATTTAGTTTGTAGAAATTGATTTCCTATGATATTACTTAATAAGATCACATGAAATTAGTCTTTTAAACTATTATGGAAACCAGGAATTGATTCGATTTTCTTCAGTTTATAGGATGTTAACTCTCTAAGTCATTTAGCCTTGTGTAGAAAAGTAATTAACTCATTGTAATTTTTCATCTTTTTCAGCTTCAAAAGTTTTCTTCTCCGGAGAAGGATAAAAGGAAAATGATGAGGAAACAGGTCAAAACTAAGAAGAAAAAGGTACTCGGTGCTCTTGGTGCCTCCTCCTGAGATGGTTTATCTTTCTTATATACTAGTGGAGTTGACATCCTGTTTCAACGTCAACTCTACTTTCTATTGGATGTGACCTATATCTTTAACCACCTACATGGGTAAAATTGATTAACTATTGTATCTTTTAGGTACTGGGTTGTTAGATTGGAAAAACATATGGCATACACGTTTAGCCATCTAAAAATGAGACTGCGTCAATTCCATCCTTGAGTTATTATTATTCCTTGATCATTCTGCAGGTACAGCAACAAAGAGTTGAAAAGAGTAACCGTAAGTTACCTGATGAGAATTACATTGAGGACTCTGAACAGCTAGCTGGCAGTAGTGATGATGAAGAAATTGTACCGGTGGTAATTAGACCCGGCCATGTTCGTTTTCTGCCTCTTGGTCAAGGTCTGTCTGTGTTTCTTATTATTTGAAAATGCATGTTATTACTTTATGCTGCTTGGTCCAAGTACTAACAAGTTTATTTAAATTTGAGTTCCAGCAGAGGCAAACCAGATTGTCCATCCAGGTCAAGCTTCAATGGTATTATCCCTGTGCTTAGATCTCTTTTCTGTTGTGTGTGGTCCTTGCAAGTGAAACCAAGTTCTTCGACAATGGAATTGACTGTTTCAGGACATCATACGGTTGAATGGGATGGCAGTTAAGAATGTAAGAAACAGGGGTCAAAGGAAGTCCTCATCTTGGACGAGTAATTGCAAGAACTGTGAAGGACAAAGTTCTAAGCCGCAAGCTAAAAAAGGTTTATCAACTATGAACCCCCCGATTGACTTCGATAAGCTCAAACCTTGTGCTAGCTTGCCCGAGGTTTGTTTTGATAATTTTTACATGCTTATGAGTATTGCATGTCCTCTCCTACTCTGGAATTAGCTTCTGTCGCTAACATATGTTTATATTGGCTCTTGTTTGGAATTGGATTCATCTCTTCCATGAACTTGTATATTGCAGAGAGGTGATATAATTGCATATCGTTTAATAGAATTATCATCAACCTGGACTCCGGAACTTTCCTCCTTCAGAGTAATAATTCTGTTGGCTCCCTTATGATATAAAATTATAAATATTTTAGATGATGCGACATAGTTATACCTTGCTCAATGTCTGCTAGGTTGGAAAGGTATTGTGGTGTAAACCTGAAGCAAATAAGATTATGGTGATTCCTGTTCCAGAATATCCATTTGTTTATAAGGCGGCAATGAATGATGAATCAATTAAACATCCATATGCAGAGGATGGATCTTTAAAGGTACTCAAATTAGCCATCATTTTTTCTGTTTTAGGAATTGCTAGTACTCATGGTCTTAAACAAGCACCAACCACTATTGGTGGCTCAGTAGTCCTTTGCTATCCAATATAGTTTTAATTGTTCTTGCTTTATGAGAAAAGGTCCCGGATAGTTGGGCTTCTATCTCTCCGGTGTTGATATAGATTTAAGATTCAGCTGTTTGTAAACCATGAAGCTAATAGATAGTTAATAGTCTATTTATCTTGTTCACTTTGAGTTAATCAGATAATGTAAGAAGCATGTCACCAGGGACGATCAAATTTAGAGCATCTTAAACTTAATTAAATTGTACTAGCCAACTGCCTGTTTTCCGCTGTCAGGTCAGGCTCAGCTTCCTGATCGATATTTTGCCAAGATGGAAAATTATGTTCCCATTTAGTTCCTAGGTTTAGAGGCTATCTCAAGCATAAGGCCTCATAGCAGCTGCTAATTGCTATTTGAAAGAGATTAACAAGTGGCGCTTTAATTTATACAGACAGATTACTCCTCACTCATTGACATCAAAATCGTTGAGCATAAAAATTCAGTAGGTTTTGAAGCAACTGCTGGTAATATCAGAGAAGCATCTGGTACAAAACAAAGTTGGAACAAGTGGGAGAACCATTCCACTGCACCGAAACAAAGCTGGAACAAATTGGGGGAGAACCACCCCAAGGCACCAAAACAAAGCTGGAAAAAGTGGGAAGACCGTACCAGTGTACGAGGTATAGAAGCTACTTGTGTTATGTGTTAGGATTAAGTAAATGTGATGCTACAACAATCTTATTTGCTGAATTCTGTGTGTTGTCTCTAGTCATTTCAGGAAATGGAAAGGAAAATGGATGGGATGAAATTCTCCAGGCTTTCGGGGCAAAGAAAGCTAAATTGTGCAATGAAGTTCGATGGAGAACAGGGGAGAATAAAGCTTGGGAAGGAGCTCATGATCCATGAGAATCACTCTAGTGGGGTACATTTGCTAGCATGTAAAGTCGTCAAGCATCTCAAGGACAAGTTGTCTACTTTTCAATTTATGCAATTTTGTACAAAATTTAGTTACATTCTCTGTAAAAGGCGGGAAGGCTATGGAAATTAGGCATTTTGTTTGAGTGTTTAGGCTCAACAATTTCATTTTGTTGTAAAGAACTTTTGTATTTCTATCATGGTGGAAGCAAAATGGGGAATGCTGCTTCGCTTCCATCTCAAGATAGAATATTTTCAGCTACAGTAGTGTATTGTTTTTGCCTGCTGGAGAAACTTTAATGTAACAACTACACTTCAGGAATTTTGGTCACATATATCAACTAAGCAAAGAAATTTCACG

mRNA sequence

AATCAGTCTTAGTTGCTTTGCTGCTGGAGGATTCTTCGGATGATCAATGAATTCGGGGACTGTGAGAATACGTTTGCTTTTCGAACAGGGGCAGCTACTGAGCAAGTCTCACAGGAAAAATGGACTCAAACGGAGTTGGATTCTTCTCAAATCTCATCTCCCTACCATTTCCGACTTCTCTTCCTATCTTCTTGATTACTTCTTCCTTCGTACTGCTTGCCCTCATGGCCTCATTCTTTCTATGGATGGCTTTGTTCTACCTCCTTTTGAACCTACTTCTATTTTGAAGGATAAAGATATTGTTAGGGTTAAGAAGAATGTGGACAATGTGGCTGCGGCTGACAAGATGGAAGAGCTTGTGAACAAGTGCACTGACTACAAAAATGAAGCAGATGCAGTTGATGAACCTTATGAACTTCTGCGTCAGTTGGAAGACACTTTGGATGCGGGAAGCGTCAAGAAAACACTTTCCAGCAAGAGGAAGGCACTGAAAACACTTCACAGTTCAAAGATGAAGAAAAAAAGAGTTGTTCCAACTTCCAAATATTTGAAGTTTCGTACAGAGCATAATGGTAGATTCCAGCACAAAGTTCTTTCTGAAAAGAGTCTGGTCGAGAAGCACAAATCATCCAGCGGTCATACCGATACAAGTATCTCCAACGAGCAAAAGCTTCAAAAGTTTTCTTCTCCGGAGAAGGATAAAAGGAAAATGATGAGGAAACAGGTCAAAACTAAGAAGAAAAAGGTACAGCAACAAAGAGTTGAAAAGAGTAACCGTAAGTTACCTGATGAGAATTACATTGAGGACTCTGAACAGCTAGCTGGCAGTAGTGATGATGAAGAAATTGTACCGGTGGTAATTAGACCCGGCCATGTTCGTTTTCTGCCTCTTGGTCAAGCAGAGGCAAACCAGATTGTCCATCCAGGTCAAGCTTCAATGGACATCATACGGTTGAATGGGATGGCAGTTAAGAATGTAAGAAACAGGGGTCAAAGGAAGTCCTCATCTTGGACGAGTAATTGCAAGAACTGTGAAGGACAAAGTTCTAAGCCGCAAGCTAAAAAAGGTTTATCAACTATGAACCCCCCGATTGACTTCGATAAGCTCAAACCTTGTGCTAGCTTGCCCGAGAGAGGTGATATAATTGCATATCGTTTAATAGAATTATCATCAACCTGGACTCCGGAACTTTCCTCCTTCAGAGTTGGAAAGGTATTGTGGTGTAAACCTGAAGCAAATAAGATTATGGTGATTCCTGTTCCAGAATATCCATTTGTTTATAAGGCGGCAATGAATGATGAATCAATTAAACATCCATATGCAGAGGATGGATCTTTAAAGACAGATTACTCCTCACTCATTGACATCAAAATCGTTGAGCATAAAAATTCAGTAGGTTTTGAAGCAACTGCTGGTAATATCAGAGAAGCATCTGGTACAAAACAAAGTTGGAACAAGTGGGAGAACCATTCCACTGCACCGAAACAAAGCTGGAACAAATTGGGGGAGAACCACCCCAAGGCACCAAAACAAAGCTGGAAAAAGTGGGAAGACCGTACCAGTGTACGAGTCATTTCAGGAAATGGAAAGGAAAATGGATGGGATGAAATTCTCCAGGCTTTCGGGGCAAAGAAAGCTAAATTGTGCAATGAAGTTCGATGGAGAACAGGGGAGAATAAAGCTTGGGAAGGAGCTCATGATCCATGAGAATCACTCTAGTGGGGTACATTTGCTAGCATGTAAAGTCGTCAAGCATCTCAAGGACAAGTTGTCTACTTTTCAATTTATGCAATTTTGTACAAAATTTAGTTACATTCTCTGTAAAAGGCGGGAAGGCTATGGAAATTAGGCATTTTGTTTGAGTGTTTAGGCTCAACAATTTCATTTTGTTGTAAAGAACTTTTGTATTTCTATCATGGTGGAAGCAAAATGGGGAATGCTGCTTCGCTTCCATCTCAAGATAGAATATTTTCAGCTACAGTAGTGTATTGTTTTTGCCTGCTGGAGAAACTTTAATGTAACAACTACACTTCAGGAATTTTGGTCACATATATCAACTAAGCAAAGAAATTTCACG

Coding sequence (CDS)

ATGAATTCGGGGACTGTGAGAATACGTTTGCTTTTCGAACAGGGGCAGCTACTGAGCAAGTCTCACAGGAAAAATGGACTCAAACGGAGTTGGATTCTTCTCAAATCTCATCTCCCTACCATTTCCGACTTCTCTTCCTATCTTCTTGATTACTTCTTCCTTCGTACTGCTTGCCCTCATGGCCTCATTCTTTCTATGGATGGCTTTGTTCTACCTCCTTTTGAACCTACTTCTATTTTGAAGGATAAAGATATTGTTAGGGTTAAGAAGAATGTGGACAATGTGGCTGCGGCTGACAAGATGGAAGAGCTTGTGAACAAGTGCACTGACTACAAAAATGAAGCAGATGCAGTTGATGAACCTTATGAACTTCTGCGTCAGTTGGAAGACACTTTGGATGCGGGAAGCGTCAAGAAAACACTTTCCAGCAAGAGGAAGGCACTGAAAACACTTCACAGTTCAAAGATGAAGAAAAAAAGAGTTGTTCCAACTTCCAAATATTTGAAGTTTCGTACAGAGCATAATGGTAGATTCCAGCACAAAGTTCTTTCTGAAAAGAGTCTGGTCGAGAAGCACAAATCATCCAGCGGTCATACCGATACAAGTATCTCCAACGAGCAAAAGCTTCAAAAGTTTTCTTCTCCGGAGAAGGATAAAAGGAAAATGATGAGGAAACAGGTCAAAACTAAGAAGAAAAAGGTACAGCAACAAAGAGTTGAAAAGAGTAACCGTAAGTTACCTGATGAGAATTACATTGAGGACTCTGAACAGCTAGCTGGCAGTAGTGATGATGAAGAAATTGTACCGGTGGTAATTAGACCCGGCCATGTTCGTTTTCTGCCTCTTGGTCAAGCAGAGGCAAACCAGATTGTCCATCCAGGTCAAGCTTCAATGGACATCATACGGTTGAATGGGATGGCAGTTAAGAATGTAAGAAACAGGGGTCAAAGGAAGTCCTCATCTTGGACGAGTAATTGCAAGAACTGTGAAGGACAAAGTTCTAAGCCGCAAGCTAAAAAAGGTTTATCAACTATGAACCCCCCGATTGACTTCGATAAGCTCAAACCTTGTGCTAGCTTGCCCGAGAGAGGTGATATAATTGCATATCGTTTAATAGAATTATCATCAACCTGGACTCCGGAACTTTCCTCCTTCAGAGTTGGAAAGGTATTGTGGTGTAAACCTGAAGCAAATAAGATTATGGTGATTCCTGTTCCAGAATATCCATTTGTTTATAAGGCGGCAATGAATGATGAATCAATTAAACATCCATATGCAGAGGATGGATCTTTAAAGACAGATTACTCCTCACTCATTGACATCAAAATCGTTGAGCATAAAAATTCAGTAGGTTTTGAAGCAACTGCTGGTAATATCAGAGAAGCATCTGGTACAAAACAAAGTTGGAACAAGTGGGAGAACCATTCCACTGCACCGAAACAAAGCTGGAACAAATTGGGGGAGAACCACCCCAAGGCACCAAAACAAAGCTGGAAAAAGTGGGAAGACCGTACCAGTGTACGAGTCATTTCAGGAAATGGAAAGGAAAATGGATGGGATGAAATTCTCCAGGCTTTCGGGGCAAAGAAAGCTAAATTGTGCAATGAAGTTCGATGGAGAACAGGGGAGAATAAAGCTTGGGAAGGAGCTCATGATCCATGA

Protein sequence

MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVAAADKMEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKVLSEKSLVEKHKSSSGHTDTSISNEQKLQKFSSPEKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDEEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMDIIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMNDESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKAPKQSWKKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP*

Homology

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BLAST of CSPI02G17420 vs. ExPASy Swiss-Prot
Match: Q8RWK8 (Coilin OS=Arabidopsis thaliana OX=3702 GN=COIL PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.9e-49
Identity = 179/600 (29.83%), Postives = 290/600 (48.33%), Query Frame = 0


Query: 1   MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILL--KSHLPTISDFSSYLLDYFFLRTAC 60
           M    VR+RL+FE  ++LSK  +K GL RSW++L  K H  TIS+FS ++   F L  AC
Sbjct: 1   MEEEKVRVRLVFEDRRILSKYQKKQGLTRSWVVLNRKCH-RTISEFSDHIFHTFSLCEAC 60

Query: 61  PHGLILSMDGFVLPPFEPTSILKDKDIVRVKK---------------NVDNVAAADKM-- 120
           PHGL LSM+GFVLPPFE + +LKDKDIV VKK               NV N    ++   
Sbjct: 61  PHGLSLSMEGFVLPPFESSCVLKDKDIVCVKKKKESLLEIVGEDSDENVYNAIEVEERPQ 120

Query: 121 ----------EELVNKCTDYKNEA---DAVDEPYELLRQLEDTLDAGSVKKTLSSKRKAL 180
                     EE   +   Y++E+   +  +E  E + + + +    +  K  S+KRK  
Sbjct: 121 IRPGEMLLANEEFQKETGGYESESEEDELEEEAEEFVPEKKASKKRKTSSKNQSTKRKKC 180

Query: 181 K--------------TLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKVLSEKSLVEKHKS 240
           K               + S+ +KKK+   +        +       K +++     + + 
Sbjct: 181 KLDTTEESPDERENTAVVSNVVKKKKKKKSLDVQSANNDEQNNDSTKPMTKSKRSSQQEE 240

Query: 241 SSGHTD---TSISNEQKLQKFSSPEKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLP---- 300
           S  H D    S   ++   + +  +K KR+ +R++ K +K+++ Q ++  +  + P    
Sbjct: 241 SKEHNDLCQLSAETKKTPSRSARRKKAKRQWLREKTKLEKEELLQTQLVVAPSQKPVITI 300

Query: 301 -----DENYIE--DSEQLAGSSD--DEEIVPVVIRPGHVRFLPL-GQAEANQIVHPGQAS 360
                 E + E  +++Q    SD   +E+VPV +RPGH+RF PL G  EA+    P    
Sbjct: 301 DHQATKEKHCETLENQQAEEVSDGFGDEVVPVEVRPGHIRFKPLAGTDEASLDSEP---L 360

Query: 361 MDIIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPC 420
           ++ +  NG   K    +   + S ++        + +  Q  +  +  N PID+++L   
Sbjct: 361 VENVLWNGNMTKKKGQKWGTEKSGFSKRYAQDFNEDATTQPAEAETLANCPIDYEQLVAY 420

Query: 421 ASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMN 480
               ++GD+IAYRLIEL+S+WTPE+SSFRVGK+ +  P++  + ++PV E+P   K   +
Sbjct: 421 TGSVKKGDVIAYRLIELTSSWTPEVSSFRVGKISYYDPDSKMVTLMPVQEFPIEKKTEED 480

Query: 481 DESIKHP----YAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWE 534
           D+    P    Y EDGSL+ ++S+L+D++ V+  +S   E     + E            
Sbjct: 481 DDFCMQPDTSLYKEDGSLEIEFSALLDVRSVKTSSSDSAEVAKSALPE------------ 540

[Close]

BLAST of CSPI02G17420 vs. ExPASy Swiss-Prot
Match: Q09003 (Coilin OS=Xenopus laevis OX=8355 GN=coil PE=2 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 1.1e-05
Identity = 25/108 (23.15%), Postives = 61/108 (56.48%), Query Frame = 0


Query: 350 DFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPE-- 409
           D+  L   A+ P+ G +IA++L+E+S  +TPE+S ++ GK+L   P   +I +  + +  
Sbjct: 425 DYSSLPLLAAAPQVGKLIAFKLLEVSENYTPEVSEYKEGKILSFDPVTKQIEMEIISQQT 484

Query: 410 ------YPFVYKAAMNDESIKHPYAEDGSLKTDYSSLIDIKIVEHKNS 450
                 +  VY++   ++ +++   ++  +  ++++LI+ +++  K S
Sbjct: 485 MRKPGKFDVVYQSEDGEDIVEYAVPQESKVMLNWNTLIEPRLLMEKES 532

[Close]

BLAST of CSPI02G17420 vs. ExPASy Swiss-Prot
Match: Q5SU73 (Coilin OS=Mus musculus OX=10090 GN=Coil PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.6e-04
Identity = 38/165 (23.03%), Postives = 79/165 (47.88%), Query Frame = 0


Query: 299 DIIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMN----------PP 358
           D++   G+  + VR RG+ +  +  S   N   +S K +    + T +          P 
Sbjct: 397 DLLFGKGLRGRGVRGRGRGRGQA-VSCVFNRSSESQKQRQLNDILTNSSVVIQNPVEPPK 456

Query: 359 IDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMV-----I 418
            D+  L   A+ P+ G+ IA++L+EL+S ++P++S ++ GK+L   PE  ++ +     +
Sbjct: 457 KDYSLLPLLAAAPQVGEKIAFKLLELTSDYSPDVSDYKEGKILSHDPETQQVDIEVLSSL 516

Query: 419 PVPEYP----FVYKAAMNDESIKHPYAEDGSLKTDYSSLIDIKIV 445
           P  + P     VY      E +++   ++  +   +  LID +++
Sbjct: 517 PALKEPGKFDLVYHNENGTEVVEYAVTQEKRITVLWRELIDPRLI 560

[Close]

BLAST of CSPI02G17420 vs. ExPASy Swiss-Prot
Match: P38432 (Coilin OS=Homo sapiens OX=9606 GN=COIL PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 4.8e-04
Identity = 33/147 (22.45%), Postives = 68/147 (46.26%), Query Frame = 0


Query: 312 RNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPI-----DFDKLKPCASLPERGDI 371
           R RG   S     +  N   Q      K   + +  P+     D+  L   A+ P+ G+ 
Sbjct: 417 RGRGHPVSCVVNRSTDNQRQQQLNDVVKNSSTIIQNPVETPKKDYSLLPLLAAAPQVGEK 476

Query: 372 IAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMV-----IPVPEYP----FVYKAAMN 431
           IA++L+EL+S+++P++S ++ G++L   PE  ++ +     +P    P     VY     
Sbjct: 477 IAFKLLELTSSYSPDVSDYKEGRILSHNPETQQVDIEILSSLPALREPGKFDLVYHNENG 536

Query: 432 DESIKHPYAEDGSLKTDYSSLIDIKIV 445
            E +++   ++  +   +  LID +++
Sbjct: 537 AEVVEYAVTQESKITVFWKELIDPRLI 563

[Close]

BLAST of CSPI02G17420 vs. ExPASy TrEMBL
Match: A0A0A0LQQ3 (Coilin OS=Cucumis sativus OX=3659 GN=Csa_2G349650 PE=3 SV=1)

HSP 1 Score: 1085.5 bits (2806), Expect = 0.0e+00
Identity = 549/553 (99.28%), Postives = 551/553 (99.64%), Query Frame = 0


Query: 1   MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPH 60
           MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPH
Sbjct: 1   MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPH 60

Query: 61  GLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVAAADKMEELVNKCTDYKNEADAVDE 120
           GLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNV AADKMEELVNKCTDYKNEADAVDE
Sbjct: 61  GLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADKMEELVNKCTDYKNEADAVDE 120

Query: 121 PYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQH 180
           PYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQH
Sbjct: 121 PYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQH 180

Query: 181 KVLSEKSLVEKHKSSSGHTDTSISNEQKLQKFSSPEKDKRKMMRKQVKTKKKKVQQQRVE 240
           KVLSEKSLVEKHKSSSGHTDTSISNEQKLQKFSSP+KDKRKMMRKQVKTKKKKVQQQRVE
Sbjct: 181 KVLSEKSLVEKHKSSSGHTDTSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVE 240

Query: 241 KSNRKLPDENYIEDSEQLAGSSDDEEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMDI 300
           KSNRKLPDENYIEDSEQLAGSSDD+EIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMDI
Sbjct: 241 KSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMDI 300

Query: 301 IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASL 360
           IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASL
Sbjct: 301 IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASL 360

Query: 361 PERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMNDES 420
           PERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMNDES
Sbjct: 361 PERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMNDES 420

Query: 421 IKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPK 480
           IKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPK
Sbjct: 421 IKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPK 480

Query: 481 QSWNKLGENHPKAPKQSWKKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWR 540
           QSWNKLGENHPK PKQSWKKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWR
Sbjct: 481 QSWNKLGENHPKPPKQSWKKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWR 540

Query: 541 TGENKAWEGAHDP 554
           TGENKAWEGAHDP
Sbjct: 541 TGENKAWEGAHDP 553

[Close]

BLAST of CSPI02G17420 vs. ExPASy TrEMBL
Match: A0A1S3BA97 (Coilin OS=Cucumis melo OX=3656 GN=LOC103487728 PE=3 SV=1)

HSP 1 Score: 1006.1 bits (2600), Expect = 5.6e-290
Identity = 511/555 (92.07%), Postives = 527/555 (94.95%), Query Frame = 0


Query: 1   MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPH 60
           MNSGTVRIRL+FE+GQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLD+F LR+ACPH
Sbjct: 1   MNSGTVRIRLVFEEGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDFFLLRSACPH 60

Query: 61  GLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVAAADKMEELVNKCTDYKNEADAVDE 120
           GLILSMDGFVLPPFEPTSILKDKDIVRVKKN DNVAA DKMEELVNKCTDYKNEADAVDE
Sbjct: 61  GLILSMDGFVLPPFEPTSILKDKDIVRVKKNADNVAAVDKMEELVNKCTDYKNEADAVDE 120

Query: 121 PYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQH 180
           PY+LLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFR EHNGRFQH
Sbjct: 121 PYDLLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRAEHNGRFQH 180

Query: 181 KV-LSEKSLVEKHKSSSGHTDTSISNEQKLQKFSSPEKDKRKMMRKQVKTKKKKVQQQRV 240
           KV LSEK L++KHK S+GHTD S+SN+QKLQKFSSPEKDKR+MMRKQVKT+KKKVQQQRV
Sbjct: 181 KVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRQMMRKQVKTRKKKVQQQRV 240

Query: 241 EKSNRKLPDENYIEDSEQLAGSSDDEEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMD 300
           EKSN KLPDENY+EDSEQLAGSSDDEEIVPVVIRPGHVRFLPLGQAEANQIVHP QASMD
Sbjct: 241 EKSNNKLPDENYVEDSEQLAGSSDDEEIVPVVIRPGHVRFLPLGQAEANQIVHPAQASMD 300

Query: 301 IIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCAS 360
            IRLNGMAVKNVRNRGQRKSSSWTSNC NCEGQSSKPQA+KGLSTMN PIDF+KLKPCAS
Sbjct: 301 TIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKLKPCAS 360

Query: 361 LPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMN-D 420
           LPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYK AMN D
Sbjct: 361 LPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKKAMNDD 420

Query: 421 ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTA 480
           ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE  AGNIREASG KQSWNKWENHST 
Sbjct: 421 ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEEAAGNIREASGAKQSWNKWENHSTT 480

Query: 481 PKQSWNKLGENHPKAPKQSWKKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVR 540
           PKQSWNK GENHPK PKQSWKKW+D TSVRVISGN KEN WDEILQAF AKKA L NEVR
Sbjct: 481 PKQSWNKWGENHPKPPKQSWKKWKDSTSVRVISGNVKENAWDEILQAFSAKKANLSNEVR 540

Query: 541 WRTGENKAWEGAHDP 554
           WRTGE KAWEGAHDP
Sbjct: 541 WRTGEKKAWEGAHDP 555

[Close]

BLAST of CSPI02G17420 vs. ExPASy TrEMBL
Match: A0A5A7V5I3 (Coilin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001890 PE=3 SV=1)

HSP 1 Score: 1002.3 bits (2590), Expect = 8.0e-289
Identity = 509/555 (91.71%), Postives = 525/555 (94.59%), Query Frame = 0


Query: 1   MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPH 60
           MNSGTVRIRL+FE+GQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLD+F LR+ACPH
Sbjct: 1   MNSGTVRIRLVFEEGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDFFLLRSACPH 60

Query: 61  GLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVAAADKMEELVNKCTDYKNEADAVDE 120
           GLILSMDGFVLPPFEPTSILKDKDIVRVKKN DNVAA DKMEELVNKCTDYKNEADAVDE
Sbjct: 61  GLILSMDGFVLPPFEPTSILKDKDIVRVKKNADNVAAVDKMEELVNKCTDYKNEADAVDE 120

Query: 121 PYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQH 180
           PY+LLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFR EHNGRFQH
Sbjct: 121 PYDLLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRAEHNGRFQH 180

Query: 181 KV-LSEKSLVEKHKSSSGHTDTSISNEQKLQKFSSPEKDKRKMMRKQVKTKKKKVQQQRV 240
           KV LSEK L++KHK S+GHTD S+SN+QK  KFSSPEKDKR+MMRKQVKT+KKKVQQQRV
Sbjct: 181 KVFLSEKRLIKKHKPSNGHTDASVSNKQKASKFSSPEKDKRQMMRKQVKTRKKKVQQQRV 240

Query: 241 EKSNRKLPDENYIEDSEQLAGSSDDEEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMD 300
           EKSN KLPDENY+EDSEQLAGSSDDEEIVPVVIRPGHVRFLPLGQAEANQIVHP QASMD
Sbjct: 241 EKSNNKLPDENYVEDSEQLAGSSDDEEIVPVVIRPGHVRFLPLGQAEANQIVHPAQASMD 300

Query: 301 IIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCAS 360
            IRLNGMAVKNVRNRGQRKSSSWTSNC NCEGQSSKPQA+KGLSTMN PIDF+KLKPCAS
Sbjct: 301 TIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKLKPCAS 360

Query: 361 LPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMN-D 420
           LPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYK AMN D
Sbjct: 361 LPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKKAMNDD 420

Query: 421 ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTA 480
           ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE  AGNIREASG KQSWNKWENHST 
Sbjct: 421 ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEEAAGNIREASGAKQSWNKWENHSTT 480

Query: 481 PKQSWNKLGENHPKAPKQSWKKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVR 540
           PKQSWNK GENHPK PKQSWKKW+D TSVRVISGN KEN WDEILQAF AKKA L NEVR
Sbjct: 481 PKQSWNKWGENHPKPPKQSWKKWKDSTSVRVISGNVKENAWDEILQAFSAKKANLSNEVR 540

Query: 541 WRTGENKAWEGAHDP 554
           WRTGE KAWEGAHDP
Sbjct: 541 WRTGEKKAWEGAHDP 555

[Close]

BLAST of CSPI02G17420 vs. ExPASy TrEMBL
Match: A0A1S3BAZ0 (Coilin OS=Cucumis melo OX=3656 GN=LOC103487728 PE=3 SV=1)

HSP 1 Score: 999.6 bits (2583), Expect = 5.2e-288
Identity = 510/555 (91.89%), Postives = 526/555 (94.77%), Query Frame = 0


Query: 1   MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPH 60
           MNSGTVRIRL+FE+GQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLD+F LR+ACPH
Sbjct: 1   MNSGTVRIRLVFEEGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDFFLLRSACPH 60

Query: 61  GLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVAAADKMEELVNKCTDYKNEADAVDE 120
           GLILSMDGFVLPPFEPTSILKDKDIVRVKKN DNVAA DKMEELVNKCTDYKNEADAVDE
Sbjct: 61  GLILSMDGFVLPPFEPTSILKDKDIVRVKKNADNVAAVDKMEELVNKCTDYKNEADAVDE 120

Query: 121 PYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQH 180
           PY+LLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFR EHNGRFQH
Sbjct: 121 PYDLLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRAEHNGRFQH 180

Query: 181 KV-LSEKSLVEKHKSSSGHTDTSISNEQKLQKFSSPEKDKRKMMRKQVKTKKKKVQQQRV 240
           KV LSEK L++KHK S+GHTD S+SN+QKLQKFSSPEKDKR+MMRKQVKT+KKKVQQQRV
Sbjct: 181 KVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRQMMRKQVKTRKKKVQQQRV 240

Query: 241 EKSNRKLPDENYIEDSEQLAGSSDDEEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMD 300
           EKSN KLPDENY+EDSEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ EANQIVHP QASMD
Sbjct: 241 EKSNNKLPDENYVEDSEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ-EANQIVHPAQASMD 300

Query: 301 IIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCAS 360
            IRLNGMAVKNVRNRGQRKSSSWTSNC NCEGQSSKPQA+KGLSTMN PIDF+KLKPCAS
Sbjct: 301 TIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKLKPCAS 360

Query: 361 LPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMN-D 420
           LPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYK AMN D
Sbjct: 361 LPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKKAMNDD 420

Query: 421 ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTA 480
           ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE  AGNIREASG KQSWNKWENHST 
Sbjct: 421 ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEEAAGNIREASGAKQSWNKWENHSTT 480

Query: 481 PKQSWNKLGENHPKAPKQSWKKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVR 540
           PKQSWNK GENHPK PKQSWKKW+D TSVRVISGN KEN WDEILQAF AKKA L NEVR
Sbjct: 481 PKQSWNKWGENHPKPPKQSWKKWKDSTSVRVISGNVKENAWDEILQAFSAKKANLSNEVR 540

Query: 541 WRTGENKAWEGAHDP 554
           WRTGE KAWEGAHDP
Sbjct: 541 WRTGEKKAWEGAHDP 554

[Close]

BLAST of CSPI02G17420 vs. ExPASy TrEMBL
Match: A0A1S3BB08 (Coilin OS=Cucumis melo OX=3656 GN=LOC103487728 PE=3 SV=1)

HSP 1 Score: 995.3 bits (2572), Expect = 9.8e-287
Identity = 508/555 (91.53%), Postives = 524/555 (94.41%), Query Frame = 0


Query: 1   MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPH 60
           MNSGTVRIRL+FE+GQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLD+F LR+ACPH
Sbjct: 1   MNSGTVRIRLVFEEGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDFFLLRSACPH 60

Query: 61  GLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVAAADKMEELVNKCTDYKNEADAVDE 120
           GLILSMDGFVLPPFEPTSILKDKDIVRVKKN DNVAA DKMEELVNKCTDYKNEADAVDE
Sbjct: 61  GLILSMDGFVLPPFEPTSILKDKDIVRVKKNADNVAAVDKMEELVNKCTDYKNEADAVDE 120

Query: 121 PYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQH 180
           PY+LLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFR EHNGRFQH
Sbjct: 121 PYDLLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRAEHNGRFQH 180

Query: 181 KV-LSEKSLVEKHKSSSGHTDTSISNEQKLQKFSSPEKDKRKMMRKQVKTKKKKVQQQRV 240
           KV LSEK L++KHK S+GHTD S+SN+QKLQKFSSPEKDKR+MMRKQVKT+KKKVQQQRV
Sbjct: 181 KVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRQMMRKQVKTRKKKVQQQRV 240

Query: 241 EKSNRKLPDENYIEDSEQLAGSSDDEEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMD 300
           EKSN KLPDENY+EDSEQLAGSSDDEEIVPVVIRPGHVRFLPLGQAEANQIVHP QASMD
Sbjct: 241 EKSNNKLPDENYVEDSEQLAGSSDDEEIVPVVIRPGHVRFLPLGQAEANQIVHPAQASMD 300

Query: 301 IIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCAS 360
            IRLNGMAVKNVRNRGQRKSSSWTSNC NCEGQSSKPQA+KGLSTMN PIDF+KLKPCAS
Sbjct: 301 TIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKLKPCAS 360

Query: 361 LPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMN-D 420
           LPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYK AMN D
Sbjct: 361 LPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKKAMNDD 420

Query: 421 ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTA 480
           ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE  AGNIREASG KQSWNKWENHST 
Sbjct: 421 ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEEAAGNIREASGAKQSWNKWENHSTT 480

Query: 481 PKQSWNKLGENHPKAPKQSWKKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVR 540
           PKQSWNK GENHPK PKQSWKKW+D TSVR   GN KEN WDEILQAF AKKA L NEVR
Sbjct: 481 PKQSWNKWGENHPKPPKQSWKKWKDSTSVR---GNVKENAWDEILQAFSAKKANLSNEVR 540

Query: 541 WRTGENKAWEGAHDP 554
           WRTGE KAWEGAHDP
Sbjct: 541 WRTGEKKAWEGAHDP 552

[Close]

BLAST of CSPI02G17420 vs. NCBI nr
Match: XP_011649500.1 (coilin isoform X1 [Cucumis sativus] >XP_031736693.1 coilin isoform X1 [Cucumis sativus] >XP_031736694.1 coilin isoform X1 [Cucumis sativus] >KGN62331.1 hypothetical protein Csa_018708 [Cucumis sativus])

HSP 1 Score: 1085.5 bits (2806), Expect = 0.0e+00
Identity = 549/553 (99.28%), Postives = 551/553 (99.64%), Query Frame = 0


Query: 1   MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPH 60
           MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPH
Sbjct: 1   MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPH 60

Query: 61  GLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVAAADKMEELVNKCTDYKNEADAVDE 120
           GLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNV AADKMEELVNKCTDYKNEADAVDE
Sbjct: 61  GLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADKMEELVNKCTDYKNEADAVDE 120

Query: 121 PYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQH 180
           PYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQH
Sbjct: 121 PYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQH 180

Query: 181 KVLSEKSLVEKHKSSSGHTDTSISNEQKLQKFSSPEKDKRKMMRKQVKTKKKKVQQQRVE 240
           KVLSEKSLVEKHKSSSGHTDTSISNEQKLQKFSSP+KDKRKMMRKQVKTKKKKVQQQRVE
Sbjct: 181 KVLSEKSLVEKHKSSSGHTDTSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVE 240

Query: 241 KSNRKLPDENYIEDSEQLAGSSDDEEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMDI 300
           KSNRKLPDENYIEDSEQLAGSSDD+EIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMDI
Sbjct: 241 KSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMDI 300

Query: 301 IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASL 360
           IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASL
Sbjct: 301 IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASL 360

Query: 361 PERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMNDES 420
           PERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMNDES
Sbjct: 361 PERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMNDES 420

Query: 421 IKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPK 480
           IKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPK
Sbjct: 421 IKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPK 480

Query: 481 QSWNKLGENHPKAPKQSWKKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWR 540
           QSWNKLGENHPK PKQSWKKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWR
Sbjct: 481 QSWNKLGENHPKPPKQSWKKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWR 540

Query: 541 TGENKAWEGAHDP 554
           TGENKAWEGAHDP
Sbjct: 541 TGENKAWEGAHDP 553

[Close]

BLAST of CSPI02G17420 vs. NCBI nr
Match: XP_011649501.1 (coilin isoform X2 [Cucumis sativus])

HSP 1 Score: 1078.9 bits (2789), Expect = 0.0e+00
Identity = 548/553 (99.10%), Postives = 550/553 (99.46%), Query Frame = 0


Query: 1   MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPH 60
           MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPH
Sbjct: 1   MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPH 60

Query: 61  GLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVAAADKMEELVNKCTDYKNEADAVDE 120
           GLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNV AADKMEELVNKCTDYKNEADAVDE
Sbjct: 61  GLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADKMEELVNKCTDYKNEADAVDE 120

Query: 121 PYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQH 180
           PYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQH
Sbjct: 121 PYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQH 180

Query: 181 KVLSEKSLVEKHKSSSGHTDTSISNEQKLQKFSSPEKDKRKMMRKQVKTKKKKVQQQRVE 240
           KVLSEKSLVEKHKSSSGHTDTSISNEQKLQKFSSP+KDKRKMMRKQVKTKKKKVQQQRVE
Sbjct: 181 KVLSEKSLVEKHKSSSGHTDTSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVE 240

Query: 241 KSNRKLPDENYIEDSEQLAGSSDDEEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMDI 300
           KSNRKLPDENYIEDSEQLAGSSDD+EIVPVVIRPGHVRFLPLGQ EANQIVHPGQASMDI
Sbjct: 241 KSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQ-EANQIVHPGQASMDI 300

Query: 301 IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASL 360
           IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASL
Sbjct: 301 IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASL 360

Query: 361 PERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMNDES 420
           PERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMNDES
Sbjct: 361 PERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMNDES 420

Query: 421 IKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPK 480
           IKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPK
Sbjct: 421 IKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPK 480

Query: 481 QSWNKLGENHPKAPKQSWKKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWR 540
           QSWNKLGENHPK PKQSWKKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWR
Sbjct: 481 QSWNKLGENHPKPPKQSWKKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWR 540

Query: 541 TGENKAWEGAHDP 554
           TGENKAWEGAHDP
Sbjct: 541 TGENKAWEGAHDP 552

[Close]

BLAST of CSPI02G17420 vs. NCBI nr
Match: XP_004143057.1 (coilin isoform X3 [Cucumis sativus])

HSP 1 Score: 1074.7 bits (2778), Expect = 4.3e-310
Identity = 546/553 (98.73%), Postives = 548/553 (99.10%), Query Frame = 0


Query: 1   MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPH 60
           MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPH
Sbjct: 1   MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPH 60

Query: 61  GLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVAAADKMEELVNKCTDYKNEADAVDE 120
           GLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNV AADKMEELVNKCTDYKNEADAVDE
Sbjct: 61  GLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADKMEELVNKCTDYKNEADAVDE 120

Query: 121 PYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQH 180
           PYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQH
Sbjct: 121 PYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQH 180

Query: 181 KVLSEKSLVEKHKSSSGHTDTSISNEQKLQKFSSPEKDKRKMMRKQVKTKKKKVQQQRVE 240
           KVLSEKSLVEKHKSSSGHTDTSISNEQKLQKFSSP+KDKRKMMRKQVKTKKKKVQQQRVE
Sbjct: 181 KVLSEKSLVEKHKSSSGHTDTSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVE 240

Query: 241 KSNRKLPDENYIEDSEQLAGSSDDEEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMDI 300
           KSNRKLPDENYIEDSEQLAGSSDD+EIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMDI
Sbjct: 241 KSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMDI 300

Query: 301 IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASL 360
           IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASL
Sbjct: 301 IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASL 360

Query: 361 PERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMNDES 420
           PERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMNDES
Sbjct: 361 PERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMNDES 420

Query: 421 IKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPK 480
           IKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPK
Sbjct: 421 IKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPK 480

Query: 481 QSWNKLGENHPKAPKQSWKKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWR 540
           QSWNKLGENHPK PKQSWKKWEDRTSVR   GNGKENGWDEILQAFGAKKAKLCNEVRWR
Sbjct: 481 QSWNKLGENHPKPPKQSWKKWEDRTSVR---GNGKENGWDEILQAFGAKKAKLCNEVRWR 540

Query: 541 TGENKAWEGAHDP 554
           TGENKAWEGAHDP
Sbjct: 541 TGENKAWEGAHDP 550

[Close]

BLAST of CSPI02G17420 vs. NCBI nr
Match: XP_008444385.1 (PREDICTED: coilin-like isoform X1 [Cucumis melo])

HSP 1 Score: 1006.1 bits (2600), Expect = 1.2e-289
Identity = 511/555 (92.07%), Postives = 527/555 (94.95%), Query Frame = 0


Query: 1   MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPH 60
           MNSGTVRIRL+FE+GQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLD+F LR+ACPH
Sbjct: 1   MNSGTVRIRLVFEEGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDFFLLRSACPH 60

Query: 61  GLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVAAADKMEELVNKCTDYKNEADAVDE 120
           GLILSMDGFVLPPFEPTSILKDKDIVRVKKN DNVAA DKMEELVNKCTDYKNEADAVDE
Sbjct: 61  GLILSMDGFVLPPFEPTSILKDKDIVRVKKNADNVAAVDKMEELVNKCTDYKNEADAVDE 120

Query: 121 PYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQH 180
           PY+LLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFR EHNGRFQH
Sbjct: 121 PYDLLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRAEHNGRFQH 180

Query: 181 KV-LSEKSLVEKHKSSSGHTDTSISNEQKLQKFSSPEKDKRKMMRKQVKTKKKKVQQQRV 240
           KV LSEK L++KHK S+GHTD S+SN+QKLQKFSSPEKDKR+MMRKQVKT+KKKVQQQRV
Sbjct: 181 KVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRQMMRKQVKTRKKKVQQQRV 240

Query: 241 EKSNRKLPDENYIEDSEQLAGSSDDEEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMD 300
           EKSN KLPDENY+EDSEQLAGSSDDEEIVPVVIRPGHVRFLPLGQAEANQIVHP QASMD
Sbjct: 241 EKSNNKLPDENYVEDSEQLAGSSDDEEIVPVVIRPGHVRFLPLGQAEANQIVHPAQASMD 300

Query: 301 IIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCAS 360
            IRLNGMAVKNVRNRGQRKSSSWTSNC NCEGQSSKPQA+KGLSTMN PIDF+KLKPCAS
Sbjct: 301 TIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKLKPCAS 360

Query: 361 LPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMN-D 420
           LPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYK AMN D
Sbjct: 361 LPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKKAMNDD 420

Query: 421 ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTA 480
           ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE  AGNIREASG KQSWNKWENHST 
Sbjct: 421 ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEEAAGNIREASGAKQSWNKWENHSTT 480

Query: 481 PKQSWNKLGENHPKAPKQSWKKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVR 540
           PKQSWNK GENHPK PKQSWKKW+D TSVRVISGN KEN WDEILQAF AKKA L NEVR
Sbjct: 481 PKQSWNKWGENHPKPPKQSWKKWKDSTSVRVISGNVKENAWDEILQAFSAKKANLSNEVR 540

Query: 541 WRTGENKAWEGAHDP 554
           WRTGE KAWEGAHDP
Sbjct: 541 WRTGEKKAWEGAHDP 555

[Close]

BLAST of CSPI02G17420 vs. NCBI nr
Match: KAA0061051.1 (coilin-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1002.3 bits (2590), Expect = 1.7e-288
Identity = 509/555 (91.71%), Postives = 525/555 (94.59%), Query Frame = 0


Query: 1   MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPH 60
           MNSGTVRIRL+FE+GQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLD+F LR+ACPH
Sbjct: 1   MNSGTVRIRLVFEEGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDFFLLRSACPH 60

Query: 61  GLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVAAADKMEELVNKCTDYKNEADAVDE 120
           GLILSMDGFVLPPFEPTSILKDKDIVRVKKN DNVAA DKMEELVNKCTDYKNEADAVDE
Sbjct: 61  GLILSMDGFVLPPFEPTSILKDKDIVRVKKNADNVAAVDKMEELVNKCTDYKNEADAVDE 120

Query: 121 PYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQH 180
           PY+LLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFR EHNGRFQH
Sbjct: 121 PYDLLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRAEHNGRFQH 180

Query: 181 KV-LSEKSLVEKHKSSSGHTDTSISNEQKLQKFSSPEKDKRKMMRKQVKTKKKKVQQQRV 240
           KV LSEK L++KHK S+GHTD S+SN+QK  KFSSPEKDKR+MMRKQVKT+KKKVQQQRV
Sbjct: 181 KVFLSEKRLIKKHKPSNGHTDASVSNKQKASKFSSPEKDKRQMMRKQVKTRKKKVQQQRV 240

Query: 241 EKSNRKLPDENYIEDSEQLAGSSDDEEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMD 300
           EKSN KLPDENY+EDSEQLAGSSDDEEIVPVVIRPGHVRFLPLGQAEANQIVHP QASMD
Sbjct: 241 EKSNNKLPDENYVEDSEQLAGSSDDEEIVPVVIRPGHVRFLPLGQAEANQIVHPAQASMD 300

Query: 301 IIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCAS 360
            IRLNGMAVKNVRNRGQRKSSSWTSNC NCEGQSSKPQA+KGLSTMN PIDF+KLKPCAS
Sbjct: 301 TIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKLKPCAS 360

Query: 361 LPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMN-D 420
           LPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYK AMN D
Sbjct: 361 LPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKKAMNDD 420

Query: 421 ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTA 480
           ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE  AGNIREASG KQSWNKWENHST 
Sbjct: 421 ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEEAAGNIREASGAKQSWNKWENHSTT 480

Query: 481 PKQSWNKLGENHPKAPKQSWKKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVR 540
           PKQSWNK GENHPK PKQSWKKW+D TSVRVISGN KEN WDEILQAF AKKA L NEVR
Sbjct: 481 PKQSWNKWGENHPKPPKQSWKKWKDSTSVRVISGNVKENAWDEILQAFSAKKANLSNEVR 540

Query: 541 WRTGENKAWEGAHDP 554
           WRTGE KAWEGAHDP
Sbjct: 541 WRTGEKKAWEGAHDP 555

[Close]

BLAST of CSPI02G17420 vs. TAIR 10
Match: AT1G13030.1 (sphere organelles protein-related )

HSP 1 Score: 197.2 bits (500), Expect = 3.5e-50
Identity = 179/600 (29.83%), Postives = 290/600 (48.33%), Query Frame = 0


Query: 1   MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILL--KSHLPTISDFSSYLLDYFFLRTAC 60
           M    VR+RL+FE  ++LSK  +K GL RSW++L  K H  TIS+FS ++   F L  AC
Sbjct: 1   MEEEKVRVRLVFEDRRILSKYQKKQGLTRSWVVLNRKCH-RTISEFSDHIFHTFSLCEAC 60

Query: 61  PHGLILSMDGFVLPPFEPTSILKDKDIVRVKK---------------NVDNVAAADKM-- 120
           PHGL LSM+GFVLPPFE + +LKDKDIV VKK               NV N    ++   
Sbjct: 61  PHGLSLSMEGFVLPPFESSCVLKDKDIVCVKKKKESLLEIVGEDSDENVYNAIEVEERPQ 120

Query: 121 ----------EELVNKCTDYKNEA---DAVDEPYELLRQLEDTLDAGSVKKTLSSKRKAL 180
                     EE   +   Y++E+   +  +E  E + + + +    +  K  S+KRK  
Sbjct: 121 IRPGEMLLANEEFQKETGGYESESEEDELEEEAEEFVPEKKASKKRKTSSKNQSTKRKKC 180

Query: 181 K--------------TLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKVLSEKSLVEKHKS 240
           K               + S+ +KKK+   +        +       K +++     + + 
Sbjct: 181 KLDTTEESPDERENTAVVSNVVKKKKKKKSLDVQSANNDEQNNDSTKPMTKSKRSSQQEE 240

Query: 241 SSGHTD---TSISNEQKLQKFSSPEKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLP---- 300
           S  H D    S   ++   + +  +K KR+ +R++ K +K+++ Q ++  +  + P    
Sbjct: 241 SKEHNDLCQLSAETKKTPSRSARRKKAKRQWLREKTKLEKEELLQTQLVVAPSQKPVITI 300

Query: 301 -----DENYIE--DSEQLAGSSD--DEEIVPVVIRPGHVRFLPL-GQAEANQIVHPGQAS 360
                 E + E  +++Q    SD   +E+VPV +RPGH+RF PL G  EA+    P    
Sbjct: 301 DHQATKEKHCETLENQQAEEVSDGFGDEVVPVEVRPGHIRFKPLAGTDEASLDSEP---L 360

Query: 361 MDIIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPC 420
           ++ +  NG   K    +   + S ++        + +  Q  +  +  N PID+++L   
Sbjct: 361 VENVLWNGNMTKKKGQKWGTEKSGFSKRYAQDFNEDATTQPAEAETLANCPIDYEQLVAY 420

Query: 421 ASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMN 480
               ++GD+IAYRLIEL+S+WTPE+SSFRVGK+ +  P++  + ++PV E+P   K   +
Sbjct: 421 TGSVKKGDVIAYRLIELTSSWTPEVSSFRVGKISYYDPDSKMVTLMPVQEFPIEKKTEED 480

Query: 481 DESIKHP----YAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWE 534
           D+    P    Y EDGSL+ ++S+L+D++ V+  +S   E     + E            
Sbjct: 481 DDFCMQPDTSLYKEDGSLEIEFSALLDVRSVKTSSSDSAEVAKSALPE------------ 540

The following BLAST results are available for this feature:

BLAST of CSPI02G17420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWK8	4.9e-49	29.83	Coilin OS=Arabidopsis thaliana OX=3702 GN=COIL PE=1 SV=1	[more]
Q09003	1.1e-05	23.15	Coilin OS=Xenopus laevis OX=8355 GN=coil PE=2 SV=2	[more]
Q5SU73	1.6e-04	23.03	Coilin OS=Mus musculus OX=10090 GN=Coil PE=1 SV=1	[more]
P38432	4.8e-04	22.45	Coilin OS=Homo sapiens OX=9606 GN=COIL PE=1 SV=1	[more]

BLAST of CSPI02G17420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQQ3	0.0e+00	99.28	Coilin OS=Cucumis sativus OX=3659 GN=Csa_2G349650 PE=3 SV=1	[more]
A0A1S3BA97	5.6e-290	92.07	Coilin OS=Cucumis melo OX=3656 GN=LOC103487728 PE=3 SV=1	[more]
A0A5A7V5I3	8.0e-289	91.71	Coilin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001890 PE=3 S...	[more]
A0A1S3BAZ0	5.2e-288	91.89	Coilin OS=Cucumis melo OX=3656 GN=LOC103487728 PE=3 SV=1	[more]
A0A1S3BB08	9.8e-287	91.53	Coilin OS=Cucumis melo OX=3656 GN=LOC103487728 PE=3 SV=1	[more]

BLAST of CSPI02G17420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649500.1	0.0e+00	99.28	coilin isoform X1 [Cucumis sativus] >XP_031736693.1 coilin isoform X1 [Cucumis s...	[more]
XP_011649501.1	0.0e+00	99.10	coilin isoform X2 [Cucumis sativus]	[more]
XP_004143057.1	4.3e-310	98.73	coilin isoform X3 [Cucumis sativus]	[more]
XP_008444385.1	1.2e-289	92.07	PREDICTED: coilin-like isoform X1 [Cucumis melo]	[more]
KAA0061051.1	1.7e-288	91.71	coilin-like isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of CSPI02G17420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13030.1	3.5e-50	29.83	sphere organelles protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 364..384
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 364..400
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..241
None	No IPR available	PANTHER	PTHR15197:SF0	COILIN	coord: 20..445
IPR024822	Coilin	PANTHER	PTHR15197	COILIN P80	coord: 20..445

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G17420.1	CSPI02G17420.1	mRNA
CSPI02G17420.2	CSPI02G17420.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000387	spliceosomal snRNP assembly
cellular_component	GO:0015030	Cajal body
molecular_function	GO:0030619	U1 snRNA binding
molecular_function	GO:0030620	U2 snRNA binding