CSPI02G07780 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGAGAGAAAAAACAAAGGTTCAATGGGAGGCATTGCTTGGACTGAAGAAGAAGATTACTTACTCAAGAAATGCATTGAACAATATGGAGAAGGGAAATGGCATCGTGTTCCTCAATTGGCTGGTTTGTTTCATTTTCCTTTTTCTACCTTTCATAATTGCTTTATTTATATTCTTGTCTTTATAGTTTTCTATATAAACTCACTGATTTCCATGTTTGAACATAACAAAGATAAAATGGTGATTTGATCACTTCAAAATTTCCAAGTTTAGTTTGAGTGGTATATTACTTGCTATATGGTTTATGCTCGTATCATTAATTCAAATTTTCAAAATTTTCTTGTGAGTACCTACTCTCAATTGAAACATAGATTTTTTCGTTGTTAATTAATACATTCACATGTTAGCTAAGCTAGGATGACTTTGGCACAACAATTTTACTATATTAGTTACTATTGATAATATTTTTCTATAGTTGCGTCTAGTTGTGAAGAAACTCGAAAAAGAAAATGAAAAAAATTACTAAATTTTTCAATTTTAAAATTCTAGGTGTATAAATTTCACTAATATGTTCAAATAATATTTTGAAATGAATGAATATGTAAACAGCTAAATGGATTTCCATATACTGAAATCTGAGCTTCTGAAACTATACTTTTCTTTTGAATGCATTAATACAAAGTTAGCATATTGACGTACTTACATTTATTAGCACAAATTTATAAAAAAATGTTAGGTAAAAAAAAATATATAGATAGGTTTTATAGCCATTTTATAAAAATAATAATATAAAATCTTGATATACTTAAAAATACATCCATTTTAGTATGTCATTCAGTAAAGATATTCTAGTTTATATTCACATGTATTAGAAATGCTATGGACATTTAACTATACAGTGCTTTTAAAAAAAGTGAAGAGTCAAGTTGAATTTGAAAAACCAATCTTAGGTCGAAACCCCTCTCGATATCAATTTCATCATTTGTTAAAATTACCAATAACTAATCGATCTTCAACAAAATTGATAATTTGAATAATTGAGTTAGAAACATTTCTCAATCCAATCTAGACGAACTCGTGAACAATCTACTTCAAAAGCTATTAATAAAACATTGAAATTGAGAGTTTCATAAATGTCATTGAATTTAGAAACAAGGGCAGATAATAGAGATGGTCCTCCAAAAAAACAAAGATGCAATGATGCACATGTGTGTCACCTACCTGTTAGCTTTGAATGCTGCATGTGGTGTGTGTATAATTTTGCATTGTCTATTTTAGGCATTTCTTTAAACACTTTATGAACTTGAGTTTGCATTTTGGTCACATTTAGGGAGCTAGCTATTTTTATCTATGTTTATTTAGACCATATGTTGTGAACATATGGGGCTAATGATAGTACCAAAGAAGAAAACGATGTTTTAAATATAGTTGGTGGCACTGTTTTTCAAACCTCACCATCAACCATTATTACTGGTTACTGTTTAAATCAAGGGTTAGGTTGAGAAAATAAACTTAAGAGGAAGAATTGGGTAAGTTATAAATTCTGAAAGTTTTTTCTTTCTTTTGTCCTAACTTCAAAGAAAATATATACTAATTATAATTTTTGAACTTTCATTTGAGTCTACTTAAAGTTGATCACGTTATTATTATATTGAAATGTTTTAGGTGATATCGTTGATTGAACAAAAACTCGATATACTTCACAACCATATTGTATAAAGTTATCATACATAAATTAAGTATAAAATATTAGAAGAATGAATTGGGAGAAAAAAAAAATAATGAGACAAATATATACATTTACTATATCCTTTAGGTTTAGACCCTACTTTAGTCTTTGTATTTTCCACATTCATGTACTTTCGTAATATCTATTGTGTCCACCCTTGAGGCTGGCCCCTCAATATGGTTGCTTGATCTTAAAGATTGGCCATGAGTGATTGAATGATGGTTAAATCTGTACTTAAAATCCATCAAGTTACTAAACTAAGAAAAATGGATACTTTATATTTTTAACTCGCAATTAGATCAATTAATTTTTTATAAAAAAATCTACATGTCAAGAGACATGACTGAACATCAAATTCAAAGGTGTATTAGACATTTTTGAAGTTTTTTTCAATATTCGTGAATGTCCGGACCAACTTACGTCCACCACGACTAATCTTATGTGACAAGTGTGATCCTACAACATTTAGATGTCAAGAAAAATTCGTAAAGATGTAAATTTTAGGTAGGTGGCATATGAATTGAATCCAAAGCCTTAGTTAATGATATAGAATAGAAAATTAAAAGTTGATGAAACTAAATTTGTGATTAAAATTTTTCTACACCAAGTTTTTGAACAAAAAAATTCAAGATCTTATCACTACTCATGATCCATCCTATGGATGGGTTTTTGAAGTTAAATCCATAAGCATTGGTTTGTGTGTGAGTTAATTGATTATGAGTTCAAAAAAATATCTATAAGGAGTAGTTGATGTAAGAAGATTTTAGTTGTTTTTATGGTATAGTTTTTAAGAACTGATGGAAGTTAATTAGTGTGATTTTGGTGATTGTGAAAAAGGTTTAAACAGATGCAGAAAGAGTTGTAGACTAAGATGGTTAAATTACCTTCGTCCAAATATCAAAAGAGGAAGCTTTACACCACAAGAAGTTGACCTCATTCTTAACCTTCACAATATCCTCGGCAACAGGCAAGTTTTCATCTTCTTCTATTTAGAAACCTAAAATATTTATCAACTATAGAAAAATTTTAGATTCTATCACTTAATATAGATGAACTTCTGTCACTGTCTATCAATATTACTAATAAAAACATATAATTGTCTATCAATGTTTATTATTGATAAAATCTAACGTTTGTTTTTGTCATTTTCCCTTCTTTTAAAATTAGAGTTATTTTTTCATTGTGCTATAATGTTACACTTGAGGCTTCCTTTCCAATACACTATCATATCAACAAAATAGTAAACTATATAAGTATTATTGAAAATCTTTATCCTATCATGGGTTAAGCTTTCACCAATAGATCAGGCTACCAATCAAATAAATTTGTTGTCATTGATATATGAGTAGTCTATTGCTATAGATTTCAATCGGACAACTTAAACATTTTATATGAGTTGAATAAAGTTAGCAAAATTTGAAATATTTTTGAACTTATAGATGTTAGTACACATTTTTTATGGTTGTTATGTTTTAATTTGCAACTGTCTCTTTGGTTTTTGCCATGTTAGGTGGTCAATTATTGCAGGAAGATTGCCAGGAAGAACAGCAAACGACATAAAGAACTATTGGAATTGTCATTTGAGCAAAAAGTTGAATGGTCAAGGAGTTGAGAAGCCAAATTCCACCAAAGAAGGATCCAATTTTGGGAAACAGTCGAAGTGGAAGCCACTTCAAGAAGAAAGCAGCAAATCGAAAGGAAAAGAATACGTTGATGATGATCAAAATAATGAAAGCCAAGGAATATTGGTACAAAATAATCAGAATCAAAATACACAACCAATTGTTGTTGAACAAAATAGTAGCATGAGTTTAGGAAATATGCAAATGGACTTATTCCAATTTGATCAACAAGTGCTCAAAGCAATGGAGGATGAAGATGGCTGCAGTAAGAGGGAGCTTTGGGATGATTGGATCTCAGAGATGGATCTTTGGATTGATTCTTTGTGAGATTGAAGAAGGA GGGAGAGAAAAAACAAAGGTTCAATGGGAGGCATTGCTTGGACTGAAGAAGAAGATTACTTACTCAAGAAATGCATTGAACAATATGGAGAAGGGAAATGGCATCGTGTTCCTCAATTGGCTGGTTTAAACAGATGCAGAAAGAGTTGTAGACTAAGATGGTTAAATTACCTTCGTCCAAATATCAAAAGAGGAAGCTTTACACCACAAGAAGTTGACCTCATTCTTAACCTTCACAATATCCTCGGCAACAGGTGGTCAATTATTGCAGGAAGATTGCCAGGAAGAACAGCAAACGACATAAAGAACTATTGGAATTGTCATTTGAGCAAAAAGTTGAATGGTCAAGGAGTTGAGAAGCCAAATTCCACCAAAGAAGGATCCAATTTTGGGAAACAGTCGAAGTGGAAGCCACTTCAAGAAGAAAGCAGCAAATCGAAAGGAAAAGAATACGTTGATGATGATCAAAATAATGAAAGCCAAGGAATATTGGTACAAAATAATCAGAATCAAAATACACAACCAATTGTTGTTGAACAAAATAGTAGCATGAGTTTAGGAAATATGCAAATGGACTTATTCCAATTTGATCAACAAGTGCTCAAAGCAATGGAGGATGAAGATGGCTGCAGTAAGAGGGAGCTTTGGGATGATTGGATCTCAGAGATGGATCTTTGGATTGATTCTTTGTGAGATTGAAGAAGGA ATGGGAGGCATTGCTTGGACTGAAGAAGAAGATTACTTACTCAAGAAATGCATTGAACAATATGGAGAAGGGAAATGGCATCGTGTTCCTCAATTGGCTGGTTTAAACAGATGCAGAAAGAGTTGTAGACTAAGATGGTTAAATTACCTTCGTCCAAATATCAAAAGAGGAAGCTTTACACCACAAGAAGTTGACCTCATTCTTAACCTTCACAATATCCTCGGCAACAGGTGGTCAATTATTGCAGGAAGATTGCCAGGAAGAACAGCAAACGACATAAAGAACTATTGGAATTGTCATTTGAGCAAAAAGTTGAATGGTCAAGGAGTTGAGAAGCCAAATTCCACCAAAGAAGGATCCAATTTTGGGAAACAGTCGAAGTGGAAGCCACTTCAAGAAGAAAGCAGCAAATCGAAAGGAAAAGAATACGTTGATGATGATCAAAATAATGAAAGCCAAGGAATATTGGTACAAAATAATCAGAATCAAAATACACAACCAATTGTTGTTGAACAAAATAGTAGCATGAGTTTAGGAAATATGCAAATGGACTTATTCCAATTTGATCAACAAGTGCTCAAAGCAATGGAGGATGAAGATGGCTGCAGTAAGAGGGAGCTTTGGGATGATTGGATCTCAGAGATGGATCTTTGGATTGATTCTTTGTGA MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFTPQEVDLILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGSNFGKQSKWKPLQEESSKSKGKEYVDDDQNNESQGILVQNNQNQNTQPIVVEQNSSMSLGNMQMDLFQFDQQVLKAMEDEDGCSKRELWDDWISEMDLWIDSL* Homology
BLAST of CSPI02G07780 vs. ExPASy Swiss-Prot
Match: A0A2R6S148 (Transcription factor MYB1 OS=Actinidia chinensis var. chinensis OX=1590841 GN=MYB1 PE=2 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 2.4e-47 Identity = 81/101 (80.20%), Postives = 91/101 (90.10%), Query Frame = 0
BLAST of CSPI02G07780 vs. ExPASy Swiss-Prot
Match: Q9FNV8 (Transcription factor MYB114 OS=Arabidopsis thaliana OX=3702 GN=MYB114 PE=1 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 6.5e-45 Identity = 78/100 (78.00%), Postives = 89/100 (89.00%), Query Frame = 0
BLAST of CSPI02G07780 vs. ExPASy Swiss-Prot
Match: Q9FE25 (Transcription factor MYB75 OS=Arabidopsis thaliana OX=3702 GN=MYB75 PE=1 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.9e-44 Identity = 77/100 (77.00%), Postives = 88/100 (88.00%), Query Frame = 0
BLAST of CSPI02G07780 vs. ExPASy Swiss-Prot
Match: Q9FNV9 (Transcription factor MYB113 OS=Arabidopsis thaliana OX=3702 GN=MYB113 PE=1 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 3.2e-44 Identity = 76/99 (76.77%), Postives = 86/99 (86.87%), Query Frame = 0
BLAST of CSPI02G07780 vs. ExPASy Swiss-Prot
Match: Q9ZTC3 (Transcription factor MYB90 OS=Arabidopsis thaliana OX=3702 GN=MYB90 PE=1 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 4.2e-44 Identity = 77/100 (77.00%), Postives = 88/100 (88.00%), Query Frame = 0
BLAST of CSPI02G07780 vs. ExPASy TrEMBL
Match: A0A1S3B4A4 (transcription factor MYB90-like OS=Cucumis melo OX=3656 GN=LOC103485861 PE=4 SV=1) HSP 1 Score: 431.8 bits (1109), Expect = 1.7e-117 Identity = 211/224 (94.20%), Postives = 216/224 (96.43%), Query Frame = 0
BLAST of CSPI02G07780 vs. ExPASy TrEMBL
Match: A0A6J1KE93 (transcription factor MYB1-like OS=Cucurbita maxima OX=3661 GN=LOC111492445 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 2.5e-92 Identity = 176/224 (78.57%), Postives = 194/224 (86.61%), Query Frame = 0
BLAST of CSPI02G07780 vs. ExPASy TrEMBL
Match: A0A6J1EYC9 (transcription factor MYB1-like OS=Cucurbita moschata OX=3662 GN=LOC111440018 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 2.5e-92 Identity = 176/224 (78.57%), Postives = 194/224 (86.61%), Query Frame = 0
BLAST of CSPI02G07780 vs. ExPASy TrEMBL
Match: A0A6J1CTG0 (transcription factor WER-like OS=Momordica charantia OX=3673 GN=LOC111014133 PE=4 SV=1) HSP 1 Score: 317.0 bits (811), Expect = 6.3e-83 Identity = 168/237 (70.89%), Postives = 188/237 (79.32%), Query Frame = 0
BLAST of CSPI02G07780 vs. ExPASy TrEMBL
Match: A0A5A7U600 (Transcription factor MYB90-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00110 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 3.2e-63 Identity = 129/142 (90.85%), Postives = 133/142 (93.66%), Query Frame = 0
BLAST of CSPI02G07780 vs. NCBI nr
Match: XP_004138976.1 (transcription factor MYB1-like [Cucumis sativus] >KAE8651728.1 hypothetical protein Csa_006721 [Cucumis sativus]) HSP 1 Score: 461.1 bits (1185), Expect = 5.5e-126 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of CSPI02G07780 vs. NCBI nr
Match: XP_008441809.1 (PREDICTED: transcription factor MYB90-like [Cucumis melo]) HSP 1 Score: 431.8 bits (1109), Expect = 3.6e-117 Identity = 211/224 (94.20%), Postives = 216/224 (96.43%), Query Frame = 0
BLAST of CSPI02G07780 vs. NCBI nr
Match: XP_038891035.1 (transcription factor MYB1-like [Benincasa hispida]) HSP 1 Score: 405.2 bits (1040), Expect = 3.6e-109 Identity = 200/222 (90.09%), Postives = 207/222 (93.24%), Query Frame = 0
BLAST of CSPI02G07780 vs. NCBI nr
Match: XP_022997553.1 (transcription factor MYB1-like [Cucurbita maxima]) HSP 1 Score: 348.2 bits (892), Expect = 5.2e-92 Identity = 176/224 (78.57%), Postives = 194/224 (86.61%), Query Frame = 0
BLAST of CSPI02G07780 vs. NCBI nr
Match: XP_022933166.1 (transcription factor MYB1-like [Cucurbita moschata] >KAG6598959.1 Transcription factor MYB1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 348.2 bits (892), Expect = 5.2e-92 Identity = 176/224 (78.57%), Postives = 194/224 (86.61%), Query Frame = 0
BLAST of CSPI02G07780 vs. TAIR 10
Match: AT1G66380.1 (myb domain protein 114 ) HSP 1 Score: 182.2 bits (461), Expect = 4.6e-46 Identity = 78/100 (78.00%), Postives = 89/100 (89.00%), Query Frame = 0
BLAST of CSPI02G07780 vs. TAIR 10
Match: AT1G56650.1 (production of anthocyanin pigment 1 ) HSP 1 Score: 180.6 bits (457), Expect = 1.3e-45 Identity = 77/100 (77.00%), Postives = 88/100 (88.00%), Query Frame = 0
BLAST of CSPI02G07780 vs. TAIR 10
Match: AT1G66370.1 (myb domain protein 113 ) HSP 1 Score: 179.9 bits (455), Expect = 2.3e-45 Identity = 76/99 (76.77%), Postives = 86/99 (86.87%), Query Frame = 0
BLAST of CSPI02G07780 vs. TAIR 10
Match: AT1G66390.1 (myb domain protein 90 ) HSP 1 Score: 179.5 bits (454), Expect = 3.0e-45 Identity = 77/100 (77.00%), Postives = 88/100 (88.00%), Query Frame = 0
BLAST of CSPI02G07780 vs. TAIR 10
Match: AT1G22640.1 (myb domain protein 3 ) HSP 1 Score: 161.0 bits (406), Expect = 1.1e-39 Identity = 69/111 (62.16%), Postives = 91/111 (81.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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