CSPI02G06000 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI02G06000
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDNA repair protein XRCC3 homolog
LocationChr2: 4510869 .. 4511896 (-)
RNA-Seq ExpressionCSPI02G06000
SyntenyCSPI02G06000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGAAAATACATAGTTGTGAAAGAGAAATGGAGGGAACCCCAAAATTCAAATCCTCCAACTTTGGCCCTCAATCTTCACTCCGCTTTTTCAGAATCGGGAATGACGCCGGAAAATCTCCTCCATCTCCTCCAAACAACCCAAAAATGCACCTTCGGCTGTCCGATCATCGACCGCTCCGTCGGCGGCGGCGTCGCTTGTAGCTCCCTCACTGAAATCGTCGCCGAAAGCGGCTGCGGCAAAACCCAACTCTGTCTCCAGCTCTCTCTCTGCGCTCAGCTCCCTCTCTCCAACGGCGGCCTTAACGCCTCATCTCTCTACATCCACACCGAGTTCCCTTTCCCTTTCCGACGCCTTCAACAGCTTTCCCAAGCATTTTCCTCTTCATATCCCCAATTTTCTAATCCCTCCGATCACATCTTTGTCGAGCCTGTTCACTCTGCCCACCAACTGTTCGACATAATGCCCAAGATAGAATCCTCCCTTGAAAATCGAAATTCCCAATTACCCATCAGGCTTATTGTGATCGATTCCATTGCGGCCTTGTTTCGCTCTGATTTCAACAACACCCCGTCTGATCTCAAGAGGAGATCGTCTCTGTTTTTCAAGATTTCTGGGAAGTTGAAGCTATTGGCTAAGAAGTATTCTTTGGCTGTTGTGTTGACGAATCAGGTGGTTGATTTGATGGGTTCTTCTGATGGATTGAATGCTTTGAGAATTGGGAATTTGAAGTTCTTGTGTTCGTCGGAACGACGCGTTTGCCCGGCATTGGGGCTGGCGTGGGCTAATTGTGTCAATTCAAGATTGTTTCTGTCAAGAAATGAGGAAGTTGTTGGGGAAGGTGAAGGGATGATGAATGGAAGTGAATTAGTACAAAGAAGAAGAACAAGAAGATGGCTTCATGTTGTTTTTGCACCACATTTGCCTAAATCATCTTGTGAGTATGTAATCAACAGAGAAGGGGTTGTGGGAGTTGAAAGCCAATGACATCTTCTTATATATGAACTTATTGATTTTGTGTGAAAGAGC

mRNA sequence

AAAGAAAATACATAGTTGTGAAAGAGAAATGGAGGGAACCCCAAAATTCAAATCCTCCAACTTTGGCCCTCAATCTTCACTCCGCTTTTTCAGAATCGGGAATGACGCCGGAAAATCTCCTCCATCTCCTCCAAACAACCCAAAAATGCACCTTCGGCTGTCCGATCATCGACCGCTCCGTCGGCGGCGGCGTCGCTTGTAGCTCCCTCACTGAAATCGTCGCCGAAAGCGGCTGCGGCAAAACCCAACTCTGTCTCCAGCTCTCTCTCTGCGCTCAGCTCCCTCTCTCCAACGGCGGCCTTAACGCCTCATCTCTCTACATCCACACCGAGTTCCCTTTCCCTTTCCGACGCCTTCAACAGCTTTCCCAAGCATTTTCCTCTTCATATCCCCAATTTTCTAATCCCTCCGATCACATCTTTGTCGAGCCTGTTCACTCTGCCCACCAACTGTTCGACATAATGCCCAAGATAGAATCCTCCCTTGAAAATCGAAATTCCCAATTACCCATCAGGCTTATTGTGATCGATTCCATTGCGGCCTTGTTTCGCTCTGATTTCAACAACACCCCGTCTGATCTCAAGAGGAGATCGTCTCTGTTTTTCAAGATTTCTGGGAAGTTGAAGCTATTGGCTAAGAAGTATTCTTTGGCTGTTGTGTTGACGAATCAGGTGGTTGATTTGATGGGTTCTTCTGATGGATTGAATGCTTTGAGAATTGGGAATTTGAAGTTCTTGTGTTCGTCGGAACGACGCGTTTGCCCGGCATTGGGGCTGGCGTGGGCTAATTGTGTCAATTCAAGATTGTTTCTGTCAAGAAATGAGGAAGTTGTTGGGGAAGGTGAAGGGATGATGAATGGAAGTGAATTAGTACAAAGAAGAAGAACAAGAAGATGGCTTCATGTTGTTTTTGCACCACATTTGCCTAAATCATCTTGTGAGTATGTAATCAACAGAGAAGGGGTTGTGGGAGTTGAAAGCCAATGACATCTTCTTATATATGAACTTATTGATTTTGTGTGAAAGAGC

Coding sequence (CDS)

ATGACGCCGGAAAATCTCCTCCATCTCCTCCAAACAACCCAAAAATGCACCTTCGGCTGTCCGATCATCGACCGCTCCGTCGGCGGCGGCGTCGCTTGTAGCTCCCTCACTGAAATCGTCGCCGAAAGCGGCTGCGGCAAAACCCAACTCTGTCTCCAGCTCTCTCTCTGCGCTCAGCTCCCTCTCTCCAACGGCGGCCTTAACGCCTCATCTCTCTACATCCACACCGAGTTCCCTTTCCCTTTCCGACGCCTTCAACAGCTTTCCCAAGCATTTTCCTCTTCATATCCCCAATTTTCTAATCCCTCCGATCACATCTTTGTCGAGCCTGTTCACTCTGCCCACCAACTGTTCGACATAATGCCCAAGATAGAATCCTCCCTTGAAAATCGAAATTCCCAATTACCCATCAGGCTTATTGTGATCGATTCCATTGCGGCCTTGTTTCGCTCTGATTTCAACAACACCCCGTCTGATCTCAAGAGGAGATCGTCTCTGTTTTTCAAGATTTCTGGGAAGTTGAAGCTATTGGCTAAGAAGTATTCTTTGGCTGTTGTGTTGACGAATCAGGTGGTTGATTTGATGGGTTCTTCTGATGGATTGAATGCTTTGAGAATTGGGAATTTGAAGTTCTTGTGTTCGTCGGAACGACGCGTTTGCCCGGCATTGGGGCTGGCGTGGGCTAATTGTGTCAATTCAAGATTGTTTCTGTCAAGAAATGAGGAAGTTGTTGGGGAAGGTGAAGGGATGATGAATGGAAGTGAATTAGTACAAAGAAGAAGAACAAGAAGATGGCTTCATGTTGTTTTTGCACCACATTTGCCTAAATCATCTTGTGAGTATGTAATCAACAGAGAAGGGGTTGTGGGAGTTGAAAGCCAATGA

Protein sequence

MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDIMPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRNEEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVESQ*
Homology
[Close]
BLAST of CSPI02G06000 vs. ExPASy Swiss-Prot
Match: Q9FKM5 (DNA repair protein XRCC3 homolog OS=Arabidopsis thaliana OX=3702 GN=XRCC3 PE=1 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 1.4e-98
Identity = 183/298 (61.41%), Postives = 226/298 (75.84%), Query Frame = 0 

Query: 3   PENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPL 62
           PENLL    T +K T GC I+D  + GG++C SLTEIVAESGCGKTQLCLQLSLC QLP+
Sbjct: 8   PENLLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPI 67

Query: 63  SNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQF-----SNPSDHIFVEPVHSAHQL 122
           S+GGLN SSLY+H+EFPFPFRRL QLS  F  S P        NP DH+FV+ VHS   L
Sbjct: 68  SHGGLNGSSLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHSVDHL 127

Query: 123 FDIMPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLL 182
           FDIMP+I+  + N  ++ P++LIV+DS+AALFRS+F+NTPSDLK+RSSLFFKISGKLK L
Sbjct: 128 FDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGKLKQL 187

Query: 183 AKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFL 242
           A K+ LA+V+TNQV DL+ +SDGL+ LRIGNL++L SS RRV P+LGLAWANCVNSR F+
Sbjct: 188 ASKFDLAIVITNQVTDLVETSDGLSGLRIGNLRYLYSSGRRVVPSLGLAWANCVNSRFFI 247

Query: 243 SRNEE--VVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 294
           SR++   V    E   N S  V R   RR L +VF+P+LP SSCE++I REG+  V++
Sbjct: 248 SRSDGSIVKDRSEKDENCSSSVSRSAKRR-LDIVFSPYLPGSSCEFMITREGICAVQA 304

[Close]
BLAST of CSPI02G06000 vs. ExPASy Swiss-Prot
Match: Q9CXE6 (DNA repair protein XRCC3 OS=Mus musculus OX=10090 GN=Xrcc3 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.8e-34
Identity = 105/302 (34.77%), Postives = 152/302 (50.33%), Query Frame = 0 

Query: 7   LHLLQTT-------QKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQ 66
           LHL Q         Q+ + GCP++D+ +GGG+    +T +   S  GKTQL LQL L  Q
Sbjct: 66  LHLFQQKESFPEQHQRLSLGCPVLDQFLGGGLPLEGITGLAGCSSAGKTQLALQLCLAVQ 125

Query: 67  LPLSNGGLNASSLYIHTEFPFPFRRLQQL---SQAFSSSYPQ-------FSNPSDHIFVE 126
            P   GGL A ++YI TE  FP +RL QL    +   +  P+       FSN   HIF+E
Sbjct: 126 FPRQYGGLEAGAVYICTEDAFPSKRLWQLIAQQRRLRTDAPEELIEKIRFSN---HIFIE 185

Query: 127 PVHSAHQLFDIMPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFK 186
                  L + + K    L +R      RL+V+DSIAA FR +F+   S +  R+ L   
Sbjct: 186 HAADVDTLLECVSKKVPILLSRGM---ARLVVVDSIAAPFRCEFHLQASAI--RAKLLLS 245

Query: 187 ISGKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWAN 246
           +   L+ L+  +   V+  NQV D++     ++       + L +SE R+ PALG+ WAN
Sbjct: 246 LGATLRRLSSTFRSPVLCINQVTDMVEDQQSVS-------RSLGASEERLSPALGITWAN 305

Query: 247 CVNSRLFLSRNEEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVV 292
            +  RL + R  E     + +  G      R   R L V+FAPHLP SSC Y ++ EG+ 
Sbjct: 306 QLLMRLMVDRTHE-----DDVTTGLP----RSPVRTLRVLFAPHLPLSSCCYTVSGEGIR 343

[Close]
BLAST of CSPI02G06000 vs. ExPASy Swiss-Prot
Match: O43542 (DNA repair protein XRCC3 OS=Homo sapiens OX=9606 GN=XRCC3 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.1e-31
Identity = 97/285 (34.04%), Postives = 141/285 (49.47%), Query Frame = 0 

Query: 14  QKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLY 73
           Q+ + GCP++D  + GG+    +TE+   S  GKTQL LQL L  Q P  +GGL A ++Y
Sbjct: 80  QRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVY 139

Query: 74  IHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLF-DIMPKIESSLENRN 133
           I TE  FP +RLQQL     +  P+         ++ +    Q+F + +  +++ LE  N
Sbjct: 140 ICTEDAFPHKRLQQL----MAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVN 199

Query: 134 SQLPI-------RLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKKYSLAV 193
            ++P+       RL+VIDS+AA FR +F++  S  + R      +   L+ L+  +   V
Sbjct: 200 KKVPVLLSRGMARLVVIDSVAAPFRCEFDSQASAPRARH--LQSLGATLRELSSAFQSPV 259

Query: 194 VLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRNEEVVG 253
           +  NQV + M      +    G L F    + RV PALG+ WAN +  RL   R  E   
Sbjct: 260 LCINQVTEAMEEQGAAH----GPLGFW---DERVSPALGITWANQLLVRLLADRLRE--- 319

Query: 254 EGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVG 291
                    E        R L V+ APHLP SSC Y I+ EGV G
Sbjct: 320 ---------EEAALGCPARTLRVLSAPHLPPSSCSYTISAEGVRG 339

[Close]
BLAST of CSPI02G06000 vs. ExPASy Swiss-Prot
Match: Q08DH8 (DNA repair protein XRCC3 OS=Bos taurus OX=9913 GN=XRCC3 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.4e-31
Identity = 100/303 (33.00%), Postives = 145/303 (47.85%), Query Frame = 0 

Query: 7   LHLL-------QTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQ 66
           LHLL       +  Q+ + GCP++D  + GG+    +TE+   S  GKTQL LQL L  Q
Sbjct: 66  LHLLRQEGPFPEQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQ 125

Query: 67  LPLSNGGLNASSLYIHTEFPFPFRRLQQL---SQAFSSSYPQFSNPSDHIFVEPVHSAHQ 126
           LP  +GGL A ++Y+ TE  FP RRLQQL    Q   +  P       H+ +  +   HQ
Sbjct: 126 LPPRHGGLGAGAVYVCTEDAFPSRRLQQLIAQQQRLRADVP------GHV-ISKIRFGHQ 185

Query: 127 LF-DIMPKIESSLENRNSQLPI-------RLIVIDSIAALFRSDFNNTPSDLKRRSSLFF 186
           +F +    +++ L+    ++P+       RL+VIDS+AA FR +F+   + L  R+    
Sbjct: 186 IFIEHAADVDTLLQCVREKVPVLLARGMARLVVIDSVAAPFRCEFDG--AALALRAQRLL 245

Query: 187 KISGKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWA 246
            +  +L+ L+  +   V+  NQV + +   D            L +    + PALG+ WA
Sbjct: 246 ALGAELRRLSCAFRSPVLCVNQVTEAVEEQD------------LVAGPPGMSPALGITWA 305

Query: 247 NCVNSRLFLSRNEEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGV 292
           N +  RL   R               E        R L VVFAPHLP SSC Y I  EGV
Sbjct: 306 NQLLVRLLADRQR------------PEEAPLTPPGRTLRVVFAPHLPASSCSYTIAAEGV 335

[Close]
BLAST of CSPI02G06000 vs. ExPASy Swiss-Prot
Match: O15315 (DNA repair protein RAD51 homolog 2 OS=Homo sapiens OX=9606 GN=RAD51B PE=1 SV=2)

HSP 1 Score: 127.1 bits (318), Expect = 3.3e-28
Identity = 89/283 (31.45%), Postives = 144/283 (50.88%), Query Frame = 0 

Query: 23  IDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPF 82
           +D ++ GGVAC SLTEI    GCGKTQ C+ +S+ A LP + GGL  + +YI TE  F  
Sbjct: 90  LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149

Query: 83  RRLQQLSQAFSSSYPQFSNPSDHIFV--EPVHSAHQLF--DIMPKIESSLENRNSQLPIR 142
            RL ++++   S +P++ N  + + +    VH   +L   +++ +IE SLE       I+
Sbjct: 150 ERLVEIAE---SRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIE-SLEEEIISKGIK 209

Query: 143 LIVIDSIAALFRSDFN-NTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQV------ 202
           L+++DS+A++ R +F+     +LK R+    + +  LK LA+++S+ V+LTNQ+      
Sbjct: 210 LVILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSG 269

Query: 203 -----VDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRNEEVVGE 262
                 DL+  +D L      +L    S    V  ALG  W++ VN+RL L   +     
Sbjct: 270 ALASQADLVSPADDL------SLSEGTSGSSCVIAALGNTWSHSVNTRLILQYLDS---- 329

Query: 263 GEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVV 290
                           RR + +  +P  P +S  Y I  EG+V
Sbjct: 330 ---------------ERRQILIAKSPLAPFTSFVYTIKEEGLV 343

[Close]
BLAST of CSPI02G06000 vs. ExPASy TrEMBL
Match: A0A0A0LK93 (RECA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G058700 PE=4 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 2.5e-164
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0 

Query: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKK
Sbjct: 121 MPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVESQ 295
           EEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVESQ
Sbjct: 241 EEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVESQ 294

[Close]
BLAST of CSPI02G06000 vs. ExPASy TrEMBL
Match: A0A5A7UPR6 (DNA repair protein XRCC3-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00560 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 4.4e-161
Identity = 287/293 (97.95%), Postives = 291/293 (99.32%), Query Frame = 0 

Query: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCP IDRSVGGG+ACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIESSLENRNS LPIRLIVIDSIAALFRSDF+NTPSDLKRRSSLFFKISGKLKLLAKK
Sbjct: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 294
           EEVVGEGEGM+NGSELVQRR+TRRWLHVVFAPHLPKSSCEYVINREGVVGVES
Sbjct: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 293

[Close]
BLAST of CSPI02G06000 vs. ExPASy TrEMBL
Match: A0A1S3BRJ5 (DNA repair protein XRCC3 homolog OS=Cucumis melo OX=3656 GN=LOC103492927 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 4.4e-161
Identity = 287/293 (97.95%), Postives = 291/293 (99.32%), Query Frame = 0 

Query: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCP IDRSVGGG+ACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIESSLENRNS LPIRLIVIDSIAALFRSDF+NTPSDLKRRSSLFFKISGKLKLLAKK
Sbjct: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 294
           EEVVGEGEGM+NGSELVQRR+TRRWLHVVFAPHLPKSSCEYVINREGVVGVES
Sbjct: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 293

[Close]
BLAST of CSPI02G06000 vs. ExPASy TrEMBL
Match: A0A5D3BPT7 (DNA repair protein XRCC3-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00290 PE=4 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 2.9e-160
Identity = 285/293 (97.27%), Postives = 291/293 (99.32%), Query Frame = 0 

Query: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCP IDRSVGGG+ACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLS+AFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIESSLENRNS LPIRLIVIDSIAALFRSDF+NTPSDLKRRSSLFFKISGKLKLLAKK
Sbjct: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 294
           EEVVGEGEGM+NGSELVQRR+TRRWLHVVFAPHLP+SSCEYVINREGVVGVES
Sbjct: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES 293

[Close]
BLAST of CSPI02G06000 vs. ExPASy TrEMBL
Match: A0A6J1FDM2 (DNA repair protein XRCC3 homolog OS=Cucurbita moschata OX=3662 GN=LOC111444415 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 1.8e-146
Identity = 265/294 (90.14%), Postives = 278/294 (94.56%), Query Frame = 0 

Query: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVAC+SLTEIV+ESGCGKTQLCLQL  CAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACNSLTEIVSESGCGKTQLCLQLCHCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLS GGL A+SLYIHTEFPFPFRRLQQLSQAFSSSYPQ SNPSDHIFVEPVHSA QLFDI
Sbjct: 61  PLSLGGLKAASLYIHTEFPFPFRRLQQLSQAFSSSYPQISNPSDHIFVEPVHSAQQLFDI 120

Query: 121 MPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIES L NR+S LP RLIVIDSIAALFRSDF+NTPSDLKRRS+LFFKISGKLKLLAK+
Sbjct: 121 MPKIESFLANRDSPLPTRLIVIDSIAALFRSDFDNTPSDLKRRSALFFKISGKLKLLAKR 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLM SSDG+NALRIGNLK LCSS RRVCPALG+AWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMDSSDGINALRIGNLKSLCSSGRRVCPALGIAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVESQ 295
           EEVVGEG+G++NG EL Q RRTRRWLHVVFAPHLPKSSCEYVINR+GVVGVESQ
Sbjct: 241 EEVVGEGDGVVNGGELAQ-RRTRRWLHVVFAPHLPKSSCEYVINRQGVVGVESQ 293

[Close]
BLAST of CSPI02G06000 vs. NCBI nr
Match: XP_004150781.1 (DNA repair protein XRCC3 homolog [Cucumis sativus] >KGN61137.1 hypothetical protein Csa_021163 [Cucumis sativus])

HSP 1 Score: 587.8 bits (1514), Expect = 5.2e-164
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0 

Query: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKK
Sbjct: 121 MPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVESQ 295
           EEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVESQ
Sbjct: 241 EEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVESQ 294

[Close]
BLAST of CSPI02G06000 vs. NCBI nr
Match: XP_008451720.1 (PREDICTED: DNA repair protein XRCC3 homolog [Cucumis melo] >KAA0055575.1 DNA repair protein XRCC3-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 577.0 bits (1486), Expect = 9.2e-161
Identity = 287/293 (97.95%), Postives = 291/293 (99.32%), Query Frame = 0 

Query: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCP IDRSVGGG+ACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIESSLENRNS LPIRLIVIDSIAALFRSDF+NTPSDLKRRSSLFFKISGKLKLLAKK
Sbjct: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 294
           EEVVGEGEGM+NGSELVQRR+TRRWLHVVFAPHLPKSSCEYVINREGVVGVES
Sbjct: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 293

[Close]
BLAST of CSPI02G06000 vs. NCBI nr
Match: TYK01347.1 (DNA repair protein XRCC3-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 574.3 bits (1479), Expect = 5.9e-160
Identity = 285/293 (97.27%), Postives = 291/293 (99.32%), Query Frame = 0 

Query: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCP IDRSVGGG+ACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLS+AFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIESSLENRNS LPIRLIVIDSIAALFRSDF+NTPSDLKRRSSLFFKISGKLKLLAKK
Sbjct: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 294
           EEVVGEGEGM+NGSELVQRR+TRRWLHVVFAPHLP+SSCEYVINREGVVGVES
Sbjct: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES 293

[Close]
BLAST of CSPI02G06000 vs. NCBI nr
Match: XP_038890688.1 (DNA repair protein XRCC3 homolog [Benincasa hispida])

HSP 1 Score: 553.5 bits (1425), Expect = 1.1e-153
Identity = 279/294 (94.90%), Postives = 286/294 (97.28%), Query Frame = 0 

Query: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCPIIDRS GGGVACSSLTEIVAESGCGKTQLCLQLSL AQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPIIDRSAGGGVACSSLTEIVAESGCGKTQLCLQLSLYAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIES L+N NSQLPIRLIVIDSIAALFRSDF+NTPSDLKRRSSLFFKISGKLKLLAK+
Sbjct: 121 MPKIESFLKNSNSQLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKR 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240
           YSL VVLTNQVVDL+GSSDGLNALRIGNLKFL SS R+VCPALGLAWANCVN+RLFLSRN
Sbjct: 181 YSLGVVLTNQVVDLIGSSDGLNALRIGNLKFLSSSGRQVCPALGLAWANCVNTRLFLSRN 240

Query: 241 EEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVESQ 295
           EE+VGEGEGMMNGSELVQ RRTRRWLHVVFAPHLPKSSCEYVINREGVVGVESQ
Sbjct: 241 EEIVGEGEGMMNGSELVQ-RRTRRWLHVVFAPHLPKSSCEYVINREGVVGVESQ 293

[Close]
BLAST of CSPI02G06000 vs. NCBI nr
Match: KAG7020901.1 (DNA repair protein XRCC3-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 528.5 bits (1360), Expect = 3.7e-146
Identity = 265/294 (90.14%), Postives = 278/294 (94.56%), Query Frame = 0 

Query: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVAC+SLTEIV+ESGCGKTQLCLQL  CAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACNSLTEIVSESGCGKTQLCLQLCHCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLS GGLNA+SLYIHTEFPFPFRRLQQLSQAFSSSYPQ SNPSDHIFVEPVHSA QLFDI
Sbjct: 61  PLSLGGLNAASLYIHTEFPFPFRRLQQLSQAFSSSYPQISNPSDHIFVEPVHSAQQLFDI 120

Query: 121 MPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIES L NR+S LP RLIVIDSIAALFRSDF+NTPSDLKRRS+LFFKISGKLKLLAK+
Sbjct: 121 MPKIESFLANRDSPLPTRLIVIDSIAALFRSDFDNTPSDLKRRSALFFKISGKLKLLAKR 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLM SSDG+NALRIGNLK LCSS RRVCPALG+AWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMDSSDGINALRIGNLKSLCSSGRRVCPALGIAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVESQ 295
           EEVVGEG+G++N  EL Q RRTRRWLHVVFAPHLPKSSCEYVINR+GVVGVESQ
Sbjct: 241 EEVVGEGDGVVNSGELAQ-RRTRRWLHVVFAPHLPKSSCEYVINRQGVVGVESQ 293

[Close]
BLAST of CSPI02G06000 vs. TAIR 10
Match: AT5G57450.1 (homolog of X-ray repair cross complementing 3 (XRCC3) )

HSP 1 Score: 360.9 bits (925), Expect = 9.6e-100
Identity = 183/298 (61.41%), Postives = 226/298 (75.84%), Query Frame = 0 

Query: 3   PENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPL 62
           PENLL    T +K T GC I+D  + GG++C SLTEIVAESGCGKTQLCLQLSLC QLP+
Sbjct: 8   PENLLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPI 67

Query: 63  SNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQF-----SNPSDHIFVEPVHSAHQL 122
           S+GGLN SSLY+H+EFPFPFRRL QLS  F  S P        NP DH+FV+ VHS   L
Sbjct: 68  SHGGLNGSSLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHSVDHL 127

Query: 123 FDIMPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLL 182
           FDIMP+I+  + N  ++ P++LIV+DS+AALFRS+F+NTPSDLK+RSSLFFKISGKLK L
Sbjct: 128 FDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGKLKQL 187

Query: 183 AKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFL 242
           A K+ LA+V+TNQV DL+ +SDGL+ LRIGNL++L SS RRV P+LGLAWANCVNSR F+
Sbjct: 188 ASKFDLAIVITNQVTDLVETSDGLSGLRIGNLRYLYSSGRRVVPSLGLAWANCVNSRFFI 247

Query: 243 SRNEE--VVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 294
           SR++   V    E   N S  V R   RR L +VF+P+LP SSCE++I REG+  V++
Sbjct: 248 SRSDGSIVKDRSEKDENCSSSVSRSAKRR-LDIVFSPYLPGSSCEFMITREGICAVQA 304

[Close]
BLAST of CSPI02G06000 vs. TAIR 10
Match: AT5G57450.2 (homolog of X-ray repair cross complementing 3 (XRCC3) )

HSP 1 Score: 360.9 bits (925), Expect = 9.6e-100
Identity = 183/298 (61.41%), Postives = 226/298 (75.84%), Query Frame = 0 

Query: 3   PENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPL 62
           PENLL    T +K T GC I+D  + GG++C SLTEIVAESGCGKTQLCLQLSLC QLP+
Sbjct: 8   PENLLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPI 67

Query: 63  SNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQF-----SNPSDHIFVEPVHSAHQL 122
           S+GGLN SSLY+H+EFPFPFRRL QLS  F  S P        NP DH+FV+ VHS   L
Sbjct: 68  SHGGLNGSSLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHSVDHL 127

Query: 123 FDIMPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLL 182
           FDIMP+I+  + N  ++ P++LIV+DS+AALFRS+F+NTPSDLK+RSSLFFKISGKLK L
Sbjct: 128 FDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGKLKQL 187

Query: 183 AKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFL 242
           A K+ LA+V+TNQV DL+ +SDGL+ LRIGNL++L SS RRV P+LGLAWANCVNSR F+
Sbjct: 188 ASKFDLAIVITNQVTDLVETSDGLSGLRIGNLRYLYSSGRRVVPSLGLAWANCVNSRFFI 247

Query: 243 SRNEE--VVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 294
           SR++   V    E   N S  V R   RR L +VF+P+LP SSCE++I REG+  V++
Sbjct: 248 SRSDGSIVKDRSEKDENCSSSVSRSAKRR-LDIVFSPYLPGSSCEFMITREGICAVQA 304

[Close]
BLAST of CSPI02G06000 vs. TAIR 10
Match: AT2G45280.1 (RAS associated with diabetes protein 51C )

HSP 1 Score: 103.6 bits (257), Expect = 2.8e-22
Identity = 84/302 (27.81%), Postives = 143/302 (47.35%), Query Frame = 0 

Query: 5   NLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSN 64
           ++LH  ++  + T  C  +D  +GGG++C  +TEI    G GKTQ+ +QLS+  Q+P   
Sbjct: 94  DMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPREC 153

Query: 65  GGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS--------------NPSD---HIF 124
           GGL   ++YI TE  F   R  Q+++A      +++               P D   +IF
Sbjct: 154 GGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIF 213

Query: 125 VEPVHSAHQLFDIMPKIESSL-ENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSL 184
              V S  +   ++  +E  + EN++    ++++++DSI   FR D++    DL +R+ +
Sbjct: 214 YFRVCSYTEQIALVNHLEKFISENKD----VKVVIVDSITFHFRQDYD----DLAQRTRV 273

Query: 185 FFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLA 244
             +++ K   LAKK+SLAVVL NQV      S+G   L +               ALG +
Sbjct: 274 LSEMALKFMKLAKKFSLAVVLLNQVTTKF--SEGSFQLAL---------------ALGDS 333

Query: 245 WANCVNSRLFLSRNEEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINRE 289
           W++   +R+ L              NG E        R+ ++  +P LP +S  Y +   
Sbjct: 334 WSHSCTNRVIL------------YWNGDE--------RYAYIDKSPSLPSASASYTVTSR 350

[Close]
BLAST of CSPI02G06000 vs. TAIR 10
Match: AT2G45280.2 (RAS associated with diabetes protein 51C )

HSP 1 Score: 103.6 bits (257), Expect = 2.8e-22
Identity = 84/302 (27.81%), Postives = 143/302 (47.35%), Query Frame = 0 

Query: 5   NLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSN 64
           ++LH  ++  + T  C  +D  +GGG++C  +TEI    G GKTQ+ +QLS+  Q+P   
Sbjct: 118 DMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPREC 177

Query: 65  GGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS--------------NPSD---HIF 124
           GGL   ++YI TE  F   R  Q+++A      +++               P D   +IF
Sbjct: 178 GGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIF 237

Query: 125 VEPVHSAHQLFDIMPKIESSL-ENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSL 184
              V S  +   ++  +E  + EN++    ++++++DSI   FR D++    DL +R+ +
Sbjct: 238 YFRVCSYTEQIALVNHLEKFISENKD----VKVVIVDSITFHFRQDYD----DLAQRTRV 297

Query: 185 FFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLA 244
             +++ K   LAKK+SLAVVL NQV      S+G   L +               ALG +
Sbjct: 298 LSEMALKFMKLAKKFSLAVVLLNQVTTKF--SEGSFQLAL---------------ALGDS 357

Query: 245 WANCVNSRLFLSRNEEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINRE 289
           W++   +R+ L              NG E        R+ ++  +P LP +S  Y +   
Sbjct: 358 WSHSCTNRVIL------------YWNGDE--------RYAYIDKSPSLPSASASYTVTSR 374

[Close]
BLAST of CSPI02G06000 vs. TAIR 10
Match: AT5G20850.1 (RAS associated with diabetes protein 51 )

HSP 1 Score: 85.1 bits (209), Expect = 1.0e-16
Identity = 76/272 (27.94%), Postives = 120/272 (44.12%), Query Frame = 0 

Query: 17  TFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHT 76
           T G   +D+ + GG+   S+TE+  E   GKTQLC  L +  QLP+  GG    ++YI  
Sbjct: 106 TSGSRELDKVLEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPMDQGGGEGKAMYIDA 165

Query: 77  EFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDIMPKIESSLENRNSQLP 136
           E  F  +RL Q++  F  +        +  +    ++ HQ   ++      +E R     
Sbjct: 166 EGTFRPQRLLQIADRFGLNGADVL--ENVAYARAYNTDHQSRLLLEAASMMIETR----- 225

Query: 137 IRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMG 196
             L+++DS  AL+R+DF+    +L  R     K    L+ LA ++ +AVV+TNQVV    
Sbjct: 226 FALLIVDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVITNQVV---A 285

Query: 197 SSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRNEEVVGEGEGMMNGSEL 256
             DG +AL  G          +  P  G   A+   +RL L +                 
Sbjct: 286 QVDG-SALFAG---------PQFKPIGGNIMAHATTTRLALRKG---------------- 337

Query: 257 VQRRRTRRWLHVVFAPHLPKSSCEYVINREGV 289
              R   R   V+ +P LP++   + I+ EGV
Sbjct: 346 ---RAEERICKVISSPCLPEAEARFQISTEGV 337

The following BLAST results are available for this feature:
BLAST of CSPI02G06000 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FKM51.4e-9861.41DNA repair protein XRCC3 homolog OS=Arabidopsis thaliana OX=3702 GN=XRCC3 PE=1 S... [more]
Q9CXE61.8e-3434.77DNA repair protein XRCC3 OS=Mus musculus OX=10090 GN=Xrcc3 PE=2 SV=1[more]
O435421.1e-3134.04DNA repair protein XRCC3 OS=Homo sapiens OX=9606 GN=XRCC3 PE=1 SV=1[more]
Q08DH82.4e-3133.00DNA repair protein XRCC3 OS=Bos taurus OX=9913 GN=XRCC3 PE=2 SV=1[more]
O153153.3e-2831.45DNA repair protein RAD51 homolog 2 OS=Homo sapiens OX=9606 GN=RAD51B PE=1 SV=2[more]
BLAST of CSPI02G06000 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LK932.5e-164100.00RECA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G058700 PE=4... [more]
A0A5A7UPR64.4e-16197.95DNA repair protein XRCC3-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A1S3BRJ54.4e-16197.95DNA repair protein XRCC3 homolog OS=Cucumis melo OX=3656 GN=LOC103492927 PE=4 SV... [more]
A0A5D3BPT72.9e-16097.27DNA repair protein XRCC3-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A6J1FDM21.8e-14690.14DNA repair protein XRCC3 homolog OS=Cucurbita moschata OX=3662 GN=LOC111444415 P... [more]
BLAST of CSPI02G06000 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004150781.15.2e-164100.00DNA repair protein XRCC3 homolog [Cucumis sativus] >KGN61137.1 hypothetical prot... [more]
XP_008451720.19.2e-16197.95PREDICTED: DNA repair protein XRCC3 homolog [Cucumis melo] >KAA0055575.1 DNA rep... [more]
TYK01347.15.9e-16097.27DNA repair protein XRCC3-like protein [Cucumis melo var. makuwa][more]
XP_038890688.11.1e-15394.90DNA repair protein XRCC3 homolog [Benincasa hispida][more]
KAG7020901.13.7e-14690.14DNA repair protein XRCC3-like protein, partial [Cucurbita argyrosperma subsp. ar... [more]
BLAST of CSPI02G06000 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G57450.19.6e-10061.41homolog of X-ray repair cross complementing 3 (XRCC3) [more]
AT5G57450.29.6e-10061.41homolog of X-ray repair cross complementing 3 (XRCC3) [more]
AT2G45280.12.8e-2227.81RAS associated with diabetes protein 51C [more]
AT2G45280.22.8e-2227.81RAS associated with diabetes protein 51C [more]
AT5G20850.11.0e-1627.94RAS associated with diabetes protein 51 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01874DNAREPAIRADAcoord: 143..167
score: 18.87
coord: 25..53
score: 41.29
NoneNo IPR availablePANTHERPTHR46487DNA REPAIR PROTEIN XRCC3coord: 1..293
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..291
e-value: 7.2E-63
score: 214.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 15..289
IPR013632DNA recombination and repair protein Rad51-like, C-terminalPFAMPF08423Rad51coord: 12..289
e-value: 4.4E-42
score: 144.1
IPR016467DNA recombination and repair protein, RecA-likePIRSFPIRSF005856Rad51coord: 1..294
e-value: 1.9E-51
score: 171.9
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROSITEPS50162RECA_2coord: 12..191
score: 46.561062
IPR033925Rad51/DMC1/RadACDDcd01123Rad51_DMC1_radAcoord: 17..289
e-value: 1.1224E-80
score: 242.104

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G06000.1CSPI02G06000.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045003 double-strand break repair via synthesis-dependent strand annealing
biological_process GO:0051321 meiotic cell cycle
biological_process GO:0071140 resolution of mitotic recombination intermediates
biological_process GO:0090656 t-circle formation
biological_process GO:0000722 telomere maintenance via recombination
biological_process GO:0006281 DNA repair
cellular_component GO:0033065 Rad51C-XRCC3 complex
cellular_component GO:0005657 replication fork
molecular_function GO:0005524 ATP binding
molecular_function GO:0008094 ATP-dependent activity, acting on DNA
molecular_function GO:0000400 four-way junction DNA binding
molecular_function GO:0003677 DNA binding