CSPI02G01190 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G01190
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr2: 791292 .. 793310 (+)
RNA-Seq Expression	CSPI02G01190
Synteny	CSPI02G01190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCAATCTGAAATGGGTTTTACTAGATTCAATCAAAGATTGTAAGAACTTAAGGACCTTTAGACAAATTCATGCTCAACTGGTAACATCAGGATTAGTTTACGATGACTTCGTCACAAGCAAAGTGATGGAATTCTTCGCCAATTTTGTTGAGTATGGTGACTATGCCTGTGATTATTTAGAACAAGGCAACACGCGCTTAGGTTCATTTCCATTCAACTCACTGATTAATGGGTATGTTGGTGGTGAGTTTCCACAAATGGCGGTTTCAGTTTATAGAAGGATGGTGAGAGATGGGTTTGTGCCCGATATGTTTACTTTTCCAGTCCTTTTGAAAGCGTGCTCTAACTTTTTAGGGAGCAGAGAAGGCAGACAAGTTCATGGCGTGGTGGTTAAATTGGGGCTTTTGGCTGATCATTATGTGCAAAACTCACTAATTCGTTGCTATGGAGCTTGTGGGGATTTTTCTTGCGCAGGTAAGGTGTTTGATGAAATGCTTGTTCGAGATGTTGTTTCGTGGAACAGTTTGATATCTGGGTTCATGAAGGCGGGGCATTTTGACGAGGCCATTTCTGTGTTTTTCAGGATGGATGTGGAGCCAAGCATGACAACTTTAGTCAGTGTGCTCGCTGCTTGTGCAAGAAATGGAGACCTGTGTACGGGGAAGGGAATTCATGGTGTGATCGAGAGGAGGTTTAAGGTGAATTTAGTACTAGGAAATGCAATGCTAGATATGTATGTAAAGAATGGATGTTTTTATGAAGCTAAGAAAATATTTGACGAGCTCCCAACAAGAGATATTGTGTCTTGGACTATCATGATCACAGGATTGGTGCAGAGTGACCATCCAAAAGAGTCCTTGGAACTGTTTTCAATGATGCGAACCTTGGGTATTAGCCCTGATGCGATTATTTTAACTAGTGTTCTCTCTGCTTGTGCTAGCCTAGGAACTCTTGACTTCGGGACATGGGTCCACGAGTACATAAACCAAAGAGGAATCAAATGGGATATCCATATTGGAACTGCCATTGTGGACATGTACGCCAAATGTGGATGTATCGAGATGGCACTGAAAATCTTTTACAGTATGTCTCAAAGAAACACCTTCACTTGGAATGCTTTGTTATGTGGTCTAGCAATGCATGGACTTGTGCACGAAGCATTAAATCTTTTTGAAGCAATGATAATATCTGGTGTCAAGCCTAACGAGATAACATTTCTAGCGATTTTGACAGCTTGCTGTCATTGTGGTCTGGTTGATGAAGGGCGCAAATATTTTGATAACATGAGTAAACTTTATAATTTGTTGCCTAAGTTGGAGCATTATGGATGTATGATTGATTTGTTCTGTCGAGCTGGACTCTTGGAAGAAGCAGTGGAGTTGGCAAGGACCATGCCAATGAAGCCTGATGTGCTTATCTGGGGAGTGCTACTAAATGCTTGCACAACTGTTGGAAACATTGAGCTTTCTCATCGCATACAGGATTATATCTTGGAACTTGATCATGACGATAGTGGAGTCTTCGTGCTGCTGTCTAATATATCTGCTATTAATCAGAGATGGTCCAATGTGACACGATTAAGGAGGTTGATGAAGGATAGAGGTGTGAGAAAAGCACCTGGATCAAGTGTCATTGAGGTAGATGGTAAGGCTCACGAGTTTGTGGTTGGAGATATTAGCCACCTCCGAACTGAAGAAATTTACAAAGTGTTAAACCTCATTAACTCTGTTTACCATGAAAGCCATTAGATGCACCCATTGTAGGGGTTTCTGGACCATTTCAGATGAAAAGGTTGGAGATCCCTATCTTCGTGTTTCATTTTAAAGGCTTCTAACAAGAGAACTACATTCCAACTTTGCCATGATGGCAGCAACTAAATCCAGAAAGCTCTTTGGAGTTTCAAGAGTCAAGCATTGGTTGGAGTTCGAAGGAAGGACATCTCAAATATTTTTCAATAATGATTGGACAAAGTGCCAAATTAAACACATTATTTCAGTGACATGTCAGAAAGCAGC

mRNA sequence

ATGTTCAATCTGAAATGGGTTTTACTAGATTCAATCAAAGATTGTAAGAACTTAAGGACCTTTAGACAAATTCATGCTCAACTGGTAACATCAGGATTAGTTTACGATGACTTCGTCACAAGCAAAGTGATGGAATTCTTCGCCAATTTTGTTGAGTATGGTGACTATGCCTGTGATTATTTAGAACAAGGCAACACGCGCTTAGGTTCATTTCCATTCAACTCACTGATTAATGGGTATGTTGGTGGTGAGTTTCCACAAATGGCGGTTTCAGTTTATAGAAGGATGGTGAGAGATGGGTTTGTGCCCGATATGTTTACTTTTCCAGTCCTTTTGAAAGCGTGCTCTAACTTTTTAGGGAGCAGAGAAGGCAGACAAGTTCATGGCGTGGTGGTTAAATTGGGGCTTTTGGCTGATCATTATGTGCAAAACTCACTAATTCGTTGCTATGGAGCTTGTGGGGATTTTTCTTGCGCAGGTAAGGTGTTTGATGAAATGCTTGTTCGAGATGTTGTTTCGTGGAACAGTTTGATATCTGGGTTCATGAAGGCGGGGCATTTTGACGAGGCCATTTCTGTGTTTTTCAGGATGGATGTGGAGCCAAGCATGACAACTTTAGTCAGTGTGCTCGCTGCTTGTGCAAGAAATGGAGACCTGTGTACGGGGAAGGGAATTCATGGTGTGATCGAGAGGAGGTTTAAGGTGAATTTAGTACTAGGAAATGCAATGCTAGATATGTATGTAAAGAATGGATGTTTTTATGAAGCTAAGAAAATATTTGACGAGCTCCCAACAAGAGATATTGTGTCTTGGACTATCATGATCACAGGATTGGTGCAGAGTGACCATCCAAAAGAGTCCTTGGAACTGTTTTCAATGATGCGAACCTTGGGTATTAGCCCTGATGCGATTATTTTAACTAGTGTTCTCTCTGCTTGTGCTAGCCTAGGAACTCTTGACTTCGGGACATGGGTCCACGAGTACATAAACCAAAGAGGAATCAAATGGGATATCCATATTGGAACTGCCATTGTGGACATGTACGCCAAATGTGGATGTATCGAGATGGCACTGAAAATCTTTTACAGTATGTCTCAAAGAAACACCTTCACTTGGAATGCTTTGTTATGTGGTCTAGCAATGCATGGACTTGTGCACGAAGCATTAAATCTTTTTGAAGCAATGATAATATCTGGTGTCAAGCCTAACGAGATAACATTTCTAGCGATTTTGACAGCTTGCTGTCATTGTGGTCTGGTTGATGAAGGGCGCAAATATTTTGATAACATGAGTAAACTTTATAATTTGTTGCCTAAGTTGGAGCATTATGGATGTATGATTGATTTGTTCTGTCGAGCTGGACTCTTGGAAGAAGCAGTGGAGTTGGCAAGGACCATGCCAATGAAGCCTGATGTGCTTATCTGGGGAGTGCTACTAAATGCTTGCACAACTGTTGGAAACATTGAGCTTTCTCATCGCATACAGGATTATATCTTGGAACTTGATCATGACGATAGTGGAGTCTTCGTGCTGCTGTCTAATATATCTGCTATTAATCAGAGATGGTCCAATGTGACACGATTAAGGAGGTTGATGAAGGATAGAGGTGTGAGAAAAGCACCTGGATCAAGTGTCATTGAGGTAGATGGTAAGGCTCACGAGTTTGTGGTTGGAGATATTAGCCACCTCCGAACTGAAGAAATTTACAAAGTGTTAAACCTCATTAACTCTGTTTACCATGAAAGCCATTAGATGCACCCATTGTAGGGGTTTCTGGACCATTTCAGATGAAAAGGTTGGAGATCCCTATCTTCGTGTTTCATTTTAAAGGCTTCTAACAAGAGAACTACATTCCAACTTTGCCATGATGGCAGCAACTAAATCCAGAAAGCTCTTTGGAGTTTCAAGAGTCAAGCATTGGTTGGAGTTCGAAGGAAGGACATCTCAAATATTTTTCAATAATGATTGGACAAAGTGCCAAATTAAACACATTATTTCAGTGACATGTCAGAAAGCAGC

Coding sequence (CDS)

ATGTTCAATCTGAAATGGGTTTTACTAGATTCAATCAAAGATTGTAAGAACTTAAGGACCTTTAGACAAATTCATGCTCAACTGGTAACATCAGGATTAGTTTACGATGACTTCGTCACAAGCAAAGTGATGGAATTCTTCGCCAATTTTGTTGAGTATGGTGACTATGCCTGTGATTATTTAGAACAAGGCAACACGCGCTTAGGTTCATTTCCATTCAACTCACTGATTAATGGGTATGTTGGTGGTGAGTTTCCACAAATGGCGGTTTCAGTTTATAGAAGGATGGTGAGAGATGGGTTTGTGCCCGATATGTTTACTTTTCCAGTCCTTTTGAAAGCGTGCTCTAACTTTTTAGGGAGCAGAGAAGGCAGACAAGTTCATGGCGTGGTGGTTAAATTGGGGCTTTTGGCTGATCATTATGTGCAAAACTCACTAATTCGTTGCTATGGAGCTTGTGGGGATTTTTCTTGCGCAGGTAAGGTGTTTGATGAAATGCTTGTTCGAGATGTTGTTTCGTGGAACAGTTTGATATCTGGGTTCATGAAGGCGGGGCATTTTGACGAGGCCATTTCTGTGTTTTTCAGGATGGATGTGGAGCCAAGCATGACAACTTTAGTCAGTGTGCTCGCTGCTTGTGCAAGAAATGGAGACCTGTGTACGGGGAAGGGAATTCATGGTGTGATCGAGAGGAGGTTTAAGGTGAATTTAGTACTAGGAAATGCAATGCTAGATATGTATGTAAAGAATGGATGTTTTTATGAAGCTAAGAAAATATTTGACGAGCTCCCAACAAGAGATATTGTGTCTTGGACTATCATGATCACAGGATTGGTGCAGAGTGACCATCCAAAAGAGTCCTTGGAACTGTTTTCAATGATGCGAACCTTGGGTATTAGCCCTGATGCGATTATTTTAACTAGTGTTCTCTCTGCTTGTGCTAGCCTAGGAACTCTTGACTTCGGGACATGGGTCCACGAGTACATAAACCAAAGAGGAATCAAATGGGATATCCATATTGGAACTGCCATTGTGGACATGTACGCCAAATGTGGATGTATCGAGATGGCACTGAAAATCTTTTACAGTATGTCTCAAAGAAACACCTTCACTTGGAATGCTTTGTTATGTGGTCTAGCAATGCATGGACTTGTGCACGAAGCATTAAATCTTTTTGAAGCAATGATAATATCTGGTGTCAAGCCTAACGAGATAACATTTCTAGCGATTTTGACAGCTTGCTGTCATTGTGGTCTGGTTGATGAAGGGCGCAAATATTTTGATAACATGAGTAAACTTTATAATTTGTTGCCTAAGTTGGAGCATTATGGATGTATGATTGATTTGTTCTGTCGAGCTGGACTCTTGGAAGAAGCAGTGGAGTTGGCAAGGACCATGCCAATGAAGCCTGATGTGCTTATCTGGGGAGTGCTACTAAATGCTTGCACAACTGTTGGAAACATTGAGCTTTCTCATCGCATACAGGATTATATCTTGGAACTTGATCATGACGATAGTGGAGTCTTCGTGCTGCTGTCTAATATATCTGCTATTAATCAGAGATGGTCCAATGTGACACGATTAAGGAGGTTGATGAAGGATAGAGGTGTGAGAAAAGCACCTGGATCAAGTGTCATTGAGGTAGATGGTAAGGCTCACGAGTTTGTGGTTGGAGATATTAGCCACCTCCGAACTGAAGAAATTTACAAAGTGTTAAACCTCATTAACTCTGTTTACCATGAAAGCCATTAG

Protein sequence

MFNLKWVLLDSIKDCKNLRTFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDYLEQGNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFLGSREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLGNAMLDMYVKNGCFYEAKKIFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEAMIISGVKPNEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLNACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKAPGSSVIEVDGKAHEFVVGDISHLRTEEIYKVLNLINSVYHESH*

Homology

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BLAST of CSPI02G01190 vs. ExPASy Swiss-Prot
Match: Q9SZK1 (Pentatricopeptide repeat-containing protein At4g38010 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E45 PE=3 SV=1)

HSP 1 Score: 595.5 bits (1534), Expect = 6.5e-169
Identity = 297/547 (54.30%), Postives = 379/547 (69.29%), Query Frame = 0


Query: 5   KWVLLDSIKDCKNLRTFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDYLEQG 64
           K VLL+ I  C +LR F+QI  QL+T  L+ DD + +KV+ F     ++  Y+   L   
Sbjct: 6   KSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSI 65

Query: 65  NTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFLGSREG 124
            + L SF +N+L++ Y   + P++ +  Y+  V +GF PDMFTFP + KAC  F G REG
Sbjct: 66  RSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREG 125

Query: 125 RQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKA 184
           +Q+HG+V K+G   D YVQNSL+  YG CG+   A KVF EM VRDVVSW  +I+GF + 
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT 185

Query: 185 GHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFK-VNLVLGNAM 244
           G + EA+  F +MDVEP++ T V VL +  R G L  GKGIHG+I +R   ++L  GNA+
Sbjct: 186 GLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNAL 245

Query: 245 LDMYVKNGCFYEAKKIFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRT-LGISPD 304
           +DMYVK     +A ++F EL  +D VSW  MI+GLV  +  KE+++LFS+M+T  GI PD
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305

Query: 305 AIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFY 364
             ILTSVLSACASLG +D G WVHEYI   GIKWD HIGTAIVDMYAKCG IE AL+IF 
Sbjct: 306 GHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFN 365

Query: 365 SMSQRNTFTWNALLCGLAMHGLVHEALNLFEAMIISGVKPNEITFLAILTACCHCGLVDE 424
            +  +N FTWNALL GLA+HG   E+L  FE M+  G KPN +TFLA L ACCH GLVDE
Sbjct: 366 GIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDE 425

Query: 425 GRKYFDNM-SKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLNA 484
           GR+YF  M S+ YNL PKLEHYGCMIDL CRAGLL+EA+EL + MP+KPDV I G +L+A
Sbjct: 426 GRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSA 485

Query: 485 CTTVGNI-ELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKA 544
           C   G + EL   I D  L+++ +DSGV+VLLSNI A N+RW +V R+RRLMK +G+ K 
Sbjct: 486 CKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKV 545

Query: 545 PGSSVIE 548
           PGSS IE
Sbjct: 546 PGSSYIE 552

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BLAST of CSPI02G01190 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 7.5e-125
Identity = 240/607 (39.54%), Postives = 353/607 (58.15%), Query Frame = 0


Query: 8   LLDSIKDCKNLRTFRQIHAQLVTSGLVYDDFVTSKVMEFFA-NFVEYGDYACDYLEQGNT 67
           LL  ++ CK L   +QI AQ++ +GL+ D F +S+++ F A +   Y DY+   L +G  
Sbjct: 56  LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKIL-KGIE 115

Query: 68  RLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFV---PDMFTFPVLLKACSNFLGSRE 127
               F +N  I G+   E P+ +  +Y++M+R G     PD FT+PVL K C++   S  
Sbjct: 116 NPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSL 175

Query: 128 GRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMK 187
           G  + G V+KL L    +V N+ I  + +CGD   A KVFDE  VRD+VSWN LI+G+ K
Sbjct: 176 GHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKK 235

Query: 188 AGHFDEAISVFFRMD---VEPSMTTLVSVLAACARNGDLCTGKGIHGVI-ERRFKVNLVL 247
            G  ++AI V+  M+   V+P   T++ ++++C+  GDL  GK  +  + E   ++ + L
Sbjct: 236 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 295

Query: 248 GNAMLDMYVKNGCFYEAKKIFDELPTRDIVSWTIMITGL--------------------- 307
            NA++DM+ K G  +EA++IFD L  R IVSWT MI+G                      
Sbjct: 296 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 355

Query: 308 ----------VQSDHPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEY 367
                     VQ+   +++L LF  M+T    PD I +   LSAC+ LG LD G W+H Y
Sbjct: 356 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 415

Query: 368 INQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEA 427
           I +  +  ++ +GT++VDMYAKCG I  AL +F+ +  RN+ T+ A++ GLA+HG    A
Sbjct: 416 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 475

Query: 428 LNLFEAMIISGVKPNEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMID 487
           ++ F  MI +G+ P+EITF+ +L+ACCH G++  GR YF  M   +NL P+L+HY  M+D
Sbjct: 476 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVD 535

Query: 488 LFCRAGLLEEAVELARTMPMKPDVLIWGVLLNACTTVGNIELSHRIQDYILELDHDDSGV 547
           L  RAGLLEEA  L  +MPM+ D  +WG LL  C   GN+EL  +    +LELD  DSG+
Sbjct: 536 LLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGI 595

Query: 548 FVLLSNISAINQRWSNVTRLRRLMKDRGVRKAPGSSVIEVDGKAHEFVVGDISHLRTEEI 576
           +VLL  +      W +  R RR+M +RGV K PG S IEV+G   EF+V D S   +E+I
Sbjct: 596 YVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKI 655

[Close]

BLAST of CSPI02G01190 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 8.0e-119
Identity = 226/606 (37.29%), Postives = 359/606 (59.24%), Query Frame = 0


Query: 9   LDSIKDCKNLRTFRQIHAQLVTSGLVYDDFVTSKVMEF--FANFVEYGDYACDY---LEQ 68
           L  + +CK L++ R IHAQ++  GL   ++  SK++EF   +   E   YA      +++
Sbjct: 37  LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96

Query: 69  GNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFLGSRE 128
            N  +    +N++  G+     P  A+ +Y  M+  G +P+ +TFP +LK+C+     +E
Sbjct: 97  PNLLI----WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKE 156

Query: 129 GRQVHGVVVKLGL---------LADHYVQN----------------------SLIRCYGA 188
           G+Q+HG V+KLG          L   YVQN                      +LI+ Y +
Sbjct: 157 GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYAS 216

Query: 189 CGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAISVF---FRMDVEPSMTTLVSV 248
            G    A K+FDE+ V+DVVSWN++ISG+ + G++ EA+ +F    + +V P  +T+V+V
Sbjct: 217 RGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTV 276

Query: 249 LAACARNGDLCTGKGIH-GVIERRFKVNLVLGNAMLDMYVKNGCFYEAKKIFDELPTRDI 308
           ++ACA++G +  G+ +H  + +  F  NL + NA++D+Y K G    A  +F+ LP +D+
Sbjct: 277 VSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV 336

Query: 309 VSWTIMITGLVQSDHPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEY 368
           +SW  +I G    +  KE+L LF  M   G +P+ + + S+L ACA LG +D G W+H Y
Sbjct: 337 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 396

Query: 369 INQR--GIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVH 428
           I++R  G+     + T+++DMYAKCG IE A ++F S+  ++  +WNA++ G AMHG   
Sbjct: 397 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRAD 456

Query: 429 EALNLFEAMIISGVKPNEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCM 488
            + +LF  M   G++P++ITF+ +L+AC H G++D GR  F  M++ Y + PKLEHYGCM
Sbjct: 457 ASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCM 516

Query: 489 IDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLNACTTVGNIELSHRIQDYILELDHDDS 548
           IDL   +GL +EA E+   M M+PD +IW  LL AC   GN+EL     + +++++ ++ 
Sbjct: 517 IDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENP 576

Query: 549 GVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKAPGSSVIEVDGKAHEFVVGDISHLRTE 573
           G +VLLSNI A   RW+ V + R L+ D+G++K PG S IE+D   HEF++GD  H R  
Sbjct: 577 GSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNR 636

[Close]

BLAST of CSPI02G01190 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 1.5e-117
Identity = 226/603 (37.48%), Postives = 346/603 (57.38%), Query Frame = 0


Query: 12  IKDCKNLRTFRQIHAQLVTSGLVYDDFVTSKV--MEFFANF--VEYGDYACDYLEQGNTR 71
           I+ C +LR  +Q H  ++ +G   D +  SK+  M   ++F  +EY     D + + N  
Sbjct: 37  IERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPN-- 96

Query: 72  LGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDG-FVPDMFTFPVLLKACSNFLGSREGRQ 131
             SF +N+LI  Y  G  P +++  +  MV +    P+ +TFP L+KA +       G+ 
Sbjct: 97  --SFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 156

Query: 132 VHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGH 191
           +HG+ VK  + +D +V NSLI CY +CGD   A KVF  +  +DVVSWNS+I+GF++ G 
Sbjct: 157 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 216

Query: 192 FDEAISVFFRM---DVEPSMTTLVSVLAACARNGDLCTGKGIHGVI-ERRFKVNLVLGNA 251
            D+A+ +F +M   DV+ S  T+V VL+ACA+  +L  G+ +   I E R  VNL L NA
Sbjct: 217 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 276

Query: 252 MLDMYVKNGCFYEAKKIFD-------------------------------ELPTRDIVSW 311
           MLDMY K G   +AK++FD                                +P +DIV+W
Sbjct: 277 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 336

Query: 312 TIMITGLVQSDHPKESLELF-SMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYIN 371
             +I+   Q+  P E+L +F  +     +  + I L S LSACA +G L+ G W+H YI 
Sbjct: 337 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 396

Query: 372 QRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEALN 431
           + GI+ + H+ +A++ MY+KCG +E + ++F S+ +R+ F W+A++ GLAMHG  +EA++
Sbjct: 397 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 456

Query: 432 LFEAMIISGVKPNEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLF 491
           +F  M  + VKPN +TF  +  AC H GLVDE    F  M   Y ++P+ +HY C++D+ 
Sbjct: 457 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 516

Query: 492 CRAGLLEEAVELARTMPMKPDVLIWGVLLNACTTVGNIELSHRIQDYILELDHDDSGVFV 551
            R+G LE+AV+    MP+ P   +WG LL AC    N+ L+      +LEL+  + G  V
Sbjct: 517 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHV 576

Query: 552 LLSNISAINQRWSNVTRLRRLMKDRGVRKAPGSSVIEVDGKAHEFVVGDISHLRTEEIYK 574
           LLSNI A   +W NV+ LR+ M+  G++K PG S IE+DG  HEF+ GD +H  +E++Y 
Sbjct: 577 LLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYG 635

[Close]

BLAST of CSPI02G01190 vs. ExPASy Swiss-Prot
Match: Q9C866 (Pentatricopeptide repeat-containing protein At1g31430 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E55 PE=2 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 4.4e-117
Identity = 221/541 (40.85%), Postives = 325/541 (60.07%), Query Frame = 0


Query: 73  FNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFLGSREGRQVHGVVV 132
           +N ++     G+     ++++  +   G  PD FT PV+LK+        EG +VHG  V
Sbjct: 14  YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73

Query: 133 KLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAIS 192
           K GL  D YV NSL+  Y + G      KVFDEM  RDVVSWN LIS ++  G F++AI 
Sbjct: 74  KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133

Query: 193 VFFRMDVEPSMT----TLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLGNAMLDMYV 252
           VF RM  E ++     T+VS L+AC+   +L  G+ I+  +   F++++ +GNA++DM+ 
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFC 193

Query: 253 KNGCFYEAKKIFDEL-------------------------------PTRDIVSWTIMITG 312
           K GC  +A+ +FD +                               P +D+V WT M+ G
Sbjct: 194 KCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNG 253

Query: 313 LVQSDHPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWD 372
            VQ +   E+LELF  M+T GI PD  +L S+L+ CA  G L+ G W+H YIN+  +  D
Sbjct: 254 YVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVD 313

Query: 373 IHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEAMII 432
             +GTA+VDMYAKCGCIE AL++FY + +R+T +W +L+ GLAM+G+   AL+L+  M  
Sbjct: 314 KVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMEN 373

Query: 433 SGVKPNEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLE 492
            GV+ + ITF+A+LTAC H G V EGRK F +M++ +N+ PK EH  C+IDL CRAGLL+
Sbjct: 374 VGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLD 433

Query: 493 EAVELARTMPMKPD---VLIWGVLLNACTTVGNIELSHRIQDYILELDHDDSGVFVLLSN 552
           EA EL   M  + D   V ++  LL+A    GN++++ R+ + + +++  DS    LL++
Sbjct: 434 EAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLAS 493

Query: 553 ISAINQRWSNVTRLRRLMKDRGVRKAPGSSVIEVDGKAHEFVVGD--ISHLRTEEIYKVL 574
           + A   RW +VT +RR MKD G+RK PG S IE+DG  HEF+VGD  +SH + +EI  +L
Sbjct: 494 VYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSML 553

[Close]

BLAST of CSPI02G01190 vs. ExPASy TrEMBL
Match: A0A0A0LF19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004700 PE=4 SV=1)

HSP 1 Score: 1187.2 bits (3070), Expect = 0.0e+00
Identity = 576/583 (98.80%), Postives = 579/583 (99.31%), Query Frame = 0


Query: 1   MFNLKWVLLDSIKDCKNLRTFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60
           MFNLKWVLLDSIKDCKNLR FRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY
Sbjct: 1   MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60

Query: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFLG 120
           LEQGNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNF G
Sbjct: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120

Query: 121 SREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISG 180
           SREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISG 180

Query: 181 FMKAGHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLG 240
           FMKAGHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLG 240

Query: 241 NAMLDMYVKNGCFYEAKKIFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300
           NAMLDMYVKNGCFYEAK IFDELPTRDIVSWTIMITGLVQSDHPK+SLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGIS 300

Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKI 360
           PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKI
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKI 360

Query: 361 FYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEAMIISGVKPNEITFLAILTACCHCGLV 420
           FYSMSQRNTFTWNALLCGLAMHGLVHEALNLFE MIISGVKPNEITFLAILTACCHCGLV
Sbjct: 361 FYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLV 420

Query: 421 DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLN 480
           DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWG+LLN
Sbjct: 421 DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLN 480

Query: 481 ACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKA 540
           ACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKA
Sbjct: 481 ACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKA 540

Query: 541 PGSSVIEVDGKAHEFVVGDISHLRTEEIYKVLNLINSVYHESH 584
           PGSSVIEVDGKAHEFVVGDISHL+TEEIYKVLNLINSVYHESH
Sbjct: 541 PGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLINSVYHESH 583

[Close]

BLAST of CSPI02G01190 vs. ExPASy TrEMBL
Match: A0A5D3CGR6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00240 PE=4 SV=1)

HSP 1 Score: 1157.5 bits (2993), Expect = 0.0e+00
Identity = 561/583 (96.23%), Postives = 572/583 (98.11%), Query Frame = 0


Query: 1   MFNLKWVLLDSIKDCKNLRTFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60
           MFNLKWVLLDSIKDCKNLR FRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY
Sbjct: 1   MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60

Query: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFLG 120
           LEQGNTRLGSFPFNSLINGYVGGEFPQ AVSVYRRMVRDGFVPDMFTFPVLLKACSNF G
Sbjct: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQTAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120

Query: 121 SREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISG 180
           SREGRQVHGVVVKLGLLAD YVQNSLIRCYGACGD SCAGKVFDEM+VRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADLYVQNSLIRCYGACGDLSCAGKVFDEMVVRDVVSWNSLISG 180

Query: 181 FMKAGHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLG 240
           FMKAGHFDEAISVFFRMDVEPS+ TLVSVLAACARNG+LCTGKGIHGVIERRFKVNLVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSIATLVSVLAACARNGNLCTGKGIHGVIERRFKVNLVLG 240

Query: 241 NAMLDMYVKNGCFYEAKKIFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300
           NAMLDMYVKNGCFYEAKK+FDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKKMFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300

Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKI 360
           PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIH GTAIVDMYAKCGCIEMAL+I
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHTGTAIVDMYAKCGCIEMALQI 360

Query: 361 FYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEAMIISGVKPNEITFLAILTACCHCGLV 420
           FYSM QRNTFTWNALLCGLAMHGLVHEAL+LFE M ISGV+PNEITFLAILTACCH GLV
Sbjct: 361 FYSMPQRNTFTWNALLCGLAMHGLVHEALDLFEVMTISGVEPNEITFLAILTACCHSGLV 420

Query: 421 DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLN 480
           DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPD+LIWGVLLN
Sbjct: 421 DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDMLIWGVLLN 480

Query: 481 ACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKA 540
           ACTTVGN+ELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGV+KA
Sbjct: 481 ACTTVGNVELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVKKA 540

Query: 541 PGSSVIEVDGKAHEFVVGDISHLRTEEIYKVLNLINSVYHESH 584
           PGSSVIEVDGKAHEFVVGDISHL+TEEIYKVLNLINSVYHESH
Sbjct: 541 PGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLINSVYHESH 583

[Close]

BLAST of CSPI02G01190 vs. ExPASy TrEMBL
Match: A0A1S3C7P6 (pentatricopeptide repeat-containing protein At4g38010 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497763 PE=4 SV=1)

HSP 1 Score: 1156.0 bits (2989), Expect = 0.0e+00
Identity = 560/583 (96.05%), Postives = 572/583 (98.11%), Query Frame = 0


Query: 1   MFNLKWVLLDSIKDCKNLRTFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60
           MFNLKWVLLDSIKDCKNLR FRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY
Sbjct: 1   MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60

Query: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFLG 120
           LEQGNTRLGSFPFNSLINGYVGGEFPQ AVSVYRRMVRDGFVPDMFTFPVLLKACSNF G
Sbjct: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQTAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120

Query: 121 SREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISG 180
           SREGRQVHGVVVKLGLLAD YVQNSLIRCYGACGD SCAGKVFDEM+VRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADLYVQNSLIRCYGACGDLSCAGKVFDEMVVRDVVSWNSLISG 180

Query: 181 FMKAGHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLG 240
           FMKAGHFDEAISVFFRMDVEPS+ TLVSVLAACARNG+LCTGKGIHGVIERRFKVNLVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSIATLVSVLAACARNGNLCTGKGIHGVIERRFKVNLVLG 240

Query: 241 NAMLDMYVKNGCFYEAKKIFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300
           NAMLDMYVKNGCFYEAKK+FDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKKMFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300

Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKI 360
           PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIH GTAIVDMYAKCGCIEMAL+I
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHTGTAIVDMYAKCGCIEMALQI 360

Query: 361 FYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEAMIISGVKPNEITFLAILTACCHCGLV 420
           FYSM QRNTFTWNALLCGLAMHGLVHEAL+LFE M ISGV+PNEITFLAILTACCH GLV
Sbjct: 361 FYSMPQRNTFTWNALLCGLAMHGLVHEALDLFEVMTISGVEPNEITFLAILTACCHSGLV 420

Query: 421 DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLN 480
           DEGRKYF+NMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPD+LIWGVLLN
Sbjct: 421 DEGRKYFENMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDMLIWGVLLN 480

Query: 481 ACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKA 540
           ACTTVGN+ELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGV+KA
Sbjct: 481 ACTTVGNVELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVKKA 540

Query: 541 PGSSVIEVDGKAHEFVVGDISHLRTEEIYKVLNLINSVYHESH 584
           PGSSVIEVDGKAHEFVVGDISHL+TEEIYKVLNLINSVYHESH
Sbjct: 541 PGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLINSVYHESH 583

[Close]

BLAST of CSPI02G01190 vs. ExPASy TrEMBL
Match: A0A5A7V3V4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001190 PE=4 SV=1)

HSP 1 Score: 1154.8 bits (2986), Expect = 0.0e+00
Identity = 559/583 (95.88%), Postives = 572/583 (98.11%), Query Frame = 0


Query: 1   MFNLKWVLLDSIKDCKNLRTFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60
           MFNLKWVLLDSIKDCKNLR FRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY
Sbjct: 1   MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60

Query: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFLG 120
           LEQGNTRLGSFPFNSLINGYVGGEFPQ AVSV+RRMVRDGFVPDMFTFPVLLKACSNF G
Sbjct: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQTAVSVFRRMVRDGFVPDMFTFPVLLKACSNFSG 120

Query: 121 SREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISG 180
           SREGRQVHGVVVKLGLLAD YVQNSLIRCYGACGD SCAGKVFDEM+VRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADLYVQNSLIRCYGACGDLSCAGKVFDEMVVRDVVSWNSLISG 180

Query: 181 FMKAGHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLG 240
           FMKAGHFDEAISVFFRMDVEPS+ TLVSVLAACARNG+LCTGKGIHGVIERRFKVNLVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSIATLVSVLAACARNGNLCTGKGIHGVIERRFKVNLVLG 240

Query: 241 NAMLDMYVKNGCFYEAKKIFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300
           NAMLDMYVKNGCFYEAKK+FDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKKMFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300

Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKI 360
           PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIH GTAIVDMYAKCGCIEMAL+I
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHTGTAIVDMYAKCGCIEMALQI 360

Query: 361 FYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEAMIISGVKPNEITFLAILTACCHCGLV 420
           FYSM QRNTFTWNALLCGLAMHGLVHEAL+LFE M ISGV+PNEITFLAILTACCH GLV
Sbjct: 361 FYSMPQRNTFTWNALLCGLAMHGLVHEALDLFEVMTISGVEPNEITFLAILTACCHSGLV 420

Query: 421 DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLN 480
           DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPD+LIWGVLLN
Sbjct: 421 DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDMLIWGVLLN 480

Query: 481 ACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKA 540
           ACTTVGN+ELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGV+KA
Sbjct: 481 ACTTVGNVELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVKKA 540

Query: 541 PGSSVIEVDGKAHEFVVGDISHLRTEEIYKVLNLINSVYHESH 584
           PGSSVIEVDGKAH+FVVGDISHL+TEEIYKVLNLINSVYHESH
Sbjct: 541 PGSSVIEVDGKAHDFVVGDISHLQTEEIYKVLNLINSVYHESH 583

[Close]

BLAST of CSPI02G01190 vs. ExPASy TrEMBL
Match: A0A6J1HYD9 (pentatricopeptide repeat-containing protein At4g38010 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467390 PE=4 SV=1)

HSP 1 Score: 1059.3 bits (2738), Expect = 5.8e-306
Identity = 511/584 (87.50%), Postives = 545/584 (93.32%), Query Frame = 0


Query: 1   MFNLKWVLLDSIKDCKNLRTFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60
           MFNLKWVLLDSIKDCKNLR F++IHAQLVTSGLVYDDFVT+KV+EFFANFVE+GDYACDY
Sbjct: 1   MFNLKWVLLDSIKDCKNLRIFKKIHAQLVTSGLVYDDFVTNKVVEFFANFVEFGDYACDY 60

Query: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFLG 120
           L+Q NTRLGSFPFNSLINGY GGEFPQMAVSVYRRM RDGFVPD+FTFPVL KACSNF G
Sbjct: 61  LKQVNTRLGSFPFNSLINGYAGGEFPQMAVSVYRRMARDGFVPDLFTFPVLFKACSNFSG 120

Query: 121 SREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISG 180
           SREGRQVHGVV+KLG+L+D +VQNSL+RCYGAC DFSCAGKVFDEMLVRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVIKLGILSDLFVQNSLVRCYGACEDFSCAGKVFDEMLVRDVVSWNSLISG 180

Query: 181 FMKAGHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLG 240
           FMKAG FD+AIS+FFRMDVEPS+ TLVSVLAACAR GDL  GKGIHG+I+RRFK++LVLG
Sbjct: 181 FMKAGRFDDAISLFFRMDVEPSVATLVSVLAACARKGDLYMGKGIHGMIQRRFKLDLVLG 240

Query: 241 NAMLDMYVKNGCFYEAKKIFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300
           NAMLDMY KNGC YEAK IFDELPTRDIVSWTIMITGLVQS+HPKESLELF MMR LGIS
Sbjct: 241 NAMLDMYAKNGCLYEAKNIFDELPTRDIVSWTIMITGLVQSNHPKESLELFWMMRNLGIS 300

Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKI 360
           PD IILTSVLSACASLGTL +GTWVHEYINQRGIKWDIHIGTAIVDMYAKCGC+EMA +I
Sbjct: 301 PDGIILTSVLSACASLGTLKYGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCVEMARQI 360

Query: 361 FYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEAMIISGVKPNEITFLAILTACCHCGLV 420
           F SM QRNTFTWNALLCGLAMHGL HEAL LFE MIISGVK NE+TFLAILTACCH GLV
Sbjct: 361 FNSMPQRNTFTWNALLCGLAMHGLAHEALYLFEVMIISGVKTNEVTFLAILTACCHSGLV 420

Query: 421 DEGRKYFDNM-SKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL 480
           DEGRKYFDNM S+ YNL PKLEHYGCMIDLFCRAGLLEEAVEL RTMPMKPDVLIWGVLL
Sbjct: 421 DEGRKYFDNMSSQRYNLSPKLEHYGCMIDLFCRAGLLEEAVELVRTMPMKPDVLIWGVLL 480

Query: 481 NACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRK 540
           NAC TVGN+ELS  IQ+YILELD +DSGVFVLLSNISA N+RWSNVTRLRRLMKDRGV+K
Sbjct: 481 NACKTVGNVELSQHIQEYILELDPEDSGVFVLLSNISATNERWSNVTRLRRLMKDRGVKK 540

Query: 541 APGSSVIEVDGKAHEFVVGDISHLRTEEIYKVLNLINSVYHESH 584
           +PGSSVIEVDGKAHEFV GDIS+L+TEEIYKVL LINSV+HESH
Sbjct: 541 SPGSSVIEVDGKAHEFVAGDISNLQTEEIYKVLTLINSVFHESH 584

[Close]

BLAST of CSPI02G01190 vs. NCBI nr
Match: XP_031736963.1 (pentatricopeptide repeat-containing protein At4g38010 isoform X1 [Cucumis sativus])

HSP 1 Score: 1187.2 bits (3070), Expect = 0.0e+00
Identity = 576/583 (98.80%), Postives = 579/583 (99.31%), Query Frame = 0


Query: 1   MFNLKWVLLDSIKDCKNLRTFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60
           MFNLKWVLLDSIKDCKNLR FRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY
Sbjct: 1   MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60

Query: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFLG 120
           LEQGNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNF G
Sbjct: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120

Query: 121 SREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISG 180
           SREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISG 180

Query: 181 FMKAGHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLG 240
           FMKAGHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLG 240

Query: 241 NAMLDMYVKNGCFYEAKKIFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300
           NAMLDMYVKNGCFYEAK IFDELPTRDIVSWTIMITGLVQSDHPK+SLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGIS 300

Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKI 360
           PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKI
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKI 360

Query: 361 FYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEAMIISGVKPNEITFLAILTACCHCGLV 420
           FYSMSQRNTFTWNALLCGLAMHGLVHEALNLFE MIISGVKPNEITFLAILTACCHCGLV
Sbjct: 361 FYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLV 420

Query: 421 DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLN 480
           DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWG+LLN
Sbjct: 421 DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLN 480

Query: 481 ACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKA 540
           ACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKA
Sbjct: 481 ACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKA 540

Query: 541 PGSSVIEVDGKAHEFVVGDISHLRTEEIYKVLNLINSVYHESH 584
           PGSSVIEVDGKAHEFVVGDISHL+TEEIYKVLNLINSVYHESH
Sbjct: 541 PGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLINSVYHESH 583

[Close]

BLAST of CSPI02G01190 vs. NCBI nr
Match: TYK10715.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1157.5 bits (2993), Expect = 0.0e+00
Identity = 561/583 (96.23%), Postives = 572/583 (98.11%), Query Frame = 0


Query: 1   MFNLKWVLLDSIKDCKNLRTFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60
           MFNLKWVLLDSIKDCKNLR FRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY
Sbjct: 1   MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60

Query: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFLG 120
           LEQGNTRLGSFPFNSLINGYVGGEFPQ AVSVYRRMVRDGFVPDMFTFPVLLKACSNF G
Sbjct: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQTAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120

Query: 121 SREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISG 180
           SREGRQVHGVVVKLGLLAD YVQNSLIRCYGACGD SCAGKVFDEM+VRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADLYVQNSLIRCYGACGDLSCAGKVFDEMVVRDVVSWNSLISG 180

Query: 181 FMKAGHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLG 240
           FMKAGHFDEAISVFFRMDVEPS+ TLVSVLAACARNG+LCTGKGIHGVIERRFKVNLVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSIATLVSVLAACARNGNLCTGKGIHGVIERRFKVNLVLG 240

Query: 241 NAMLDMYVKNGCFYEAKKIFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300
           NAMLDMYVKNGCFYEAKK+FDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKKMFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300

Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKI 360
           PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIH GTAIVDMYAKCGCIEMAL+I
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHTGTAIVDMYAKCGCIEMALQI 360

Query: 361 FYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEAMIISGVKPNEITFLAILTACCHCGLV 420
           FYSM QRNTFTWNALLCGLAMHGLVHEAL+LFE M ISGV+PNEITFLAILTACCH GLV
Sbjct: 361 FYSMPQRNTFTWNALLCGLAMHGLVHEALDLFEVMTISGVEPNEITFLAILTACCHSGLV 420

Query: 421 DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLN 480
           DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPD+LIWGVLLN
Sbjct: 421 DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDMLIWGVLLN 480

Query: 481 ACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKA 540
           ACTTVGN+ELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGV+KA
Sbjct: 481 ACTTVGNVELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVKKA 540

Query: 541 PGSSVIEVDGKAHEFVVGDISHLRTEEIYKVLNLINSVYHESH 584
           PGSSVIEVDGKAHEFVVGDISHL+TEEIYKVLNLINSVYHESH
Sbjct: 541 PGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLINSVYHESH 583

[Close]

BLAST of CSPI02G01190 vs. NCBI nr
Match: XP_008458315.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g38010 isoform X1 [Cucumis melo])

HSP 1 Score: 1156.0 bits (2989), Expect = 0.0e+00
Identity = 560/583 (96.05%), Postives = 572/583 (98.11%), Query Frame = 0


Query: 1   MFNLKWVLLDSIKDCKNLRTFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60
           MFNLKWVLLDSIKDCKNLR FRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY
Sbjct: 1   MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60

Query: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFLG 120
           LEQGNTRLGSFPFNSLINGYVGGEFPQ AVSVYRRMVRDGFVPDMFTFPVLLKACSNF G
Sbjct: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQTAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120

Query: 121 SREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISG 180
           SREGRQVHGVVVKLGLLAD YVQNSLIRCYGACGD SCAGKVFDEM+VRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADLYVQNSLIRCYGACGDLSCAGKVFDEMVVRDVVSWNSLISG 180

Query: 181 FMKAGHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLG 240
           FMKAGHFDEAISVFFRMDVEPS+ TLVSVLAACARNG+LCTGKGIHGVIERRFKVNLVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSIATLVSVLAACARNGNLCTGKGIHGVIERRFKVNLVLG 240

Query: 241 NAMLDMYVKNGCFYEAKKIFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300
           NAMLDMYVKNGCFYEAKK+FDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKKMFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300

Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKI 360
           PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIH GTAIVDMYAKCGCIEMAL+I
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHTGTAIVDMYAKCGCIEMALQI 360

Query: 361 FYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEAMIISGVKPNEITFLAILTACCHCGLV 420
           FYSM QRNTFTWNALLCGLAMHGLVHEAL+LFE M ISGV+PNEITFLAILTACCH GLV
Sbjct: 361 FYSMPQRNTFTWNALLCGLAMHGLVHEALDLFEVMTISGVEPNEITFLAILTACCHSGLV 420

Query: 421 DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLN 480
           DEGRKYF+NMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPD+LIWGVLLN
Sbjct: 421 DEGRKYFENMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDMLIWGVLLN 480

Query: 481 ACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKA 540
           ACTTVGN+ELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGV+KA
Sbjct: 481 ACTTVGNVELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVKKA 540

Query: 541 PGSSVIEVDGKAHEFVVGDISHLRTEEIYKVLNLINSVYHESH 584
           PGSSVIEVDGKAHEFVVGDISHL+TEEIYKVLNLINSVYHESH
Sbjct: 541 PGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLINSVYHESH 583

[Close]

BLAST of CSPI02G01190 vs. NCBI nr
Match: KAA0061557.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1154.8 bits (2986), Expect = 0.0e+00
Identity = 559/583 (95.88%), Postives = 572/583 (98.11%), Query Frame = 0


Query: 1   MFNLKWVLLDSIKDCKNLRTFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60
           MFNLKWVLLDSIKDCKNLR FRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY
Sbjct: 1   MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60

Query: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFLG 120
           LEQGNTRLGSFPFNSLINGYVGGEFPQ AVSV+RRMVRDGFVPDMFTFPVLLKACSNF G
Sbjct: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQTAVSVFRRMVRDGFVPDMFTFPVLLKACSNFSG 120

Query: 121 SREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISG 180
           SREGRQVHGVVVKLGLLAD YVQNSLIRCYGACGD SCAGKVFDEM+VRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADLYVQNSLIRCYGACGDLSCAGKVFDEMVVRDVVSWNSLISG 180

Query: 181 FMKAGHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLG 240
           FMKAGHFDEAISVFFRMDVEPS+ TLVSVLAACARNG+LCTGKGIHGVIERRFKVNLVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSIATLVSVLAACARNGNLCTGKGIHGVIERRFKVNLVLG 240

Query: 241 NAMLDMYVKNGCFYEAKKIFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300
           NAMLDMYVKNGCFYEAKK+FDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKKMFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300

Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKI 360
           PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIH GTAIVDMYAKCGCIEMAL+I
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHTGTAIVDMYAKCGCIEMALQI 360

Query: 361 FYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEAMIISGVKPNEITFLAILTACCHCGLV 420
           FYSM QRNTFTWNALLCGLAMHGLVHEAL+LFE M ISGV+PNEITFLAILTACCH GLV
Sbjct: 361 FYSMPQRNTFTWNALLCGLAMHGLVHEALDLFEVMTISGVEPNEITFLAILTACCHSGLV 420

Query: 421 DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLN 480
           DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPD+LIWGVLLN
Sbjct: 421 DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDMLIWGVLLN 480

Query: 481 ACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKA 540
           ACTTVGN+ELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGV+KA
Sbjct: 481 ACTTVGNVELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVKKA 540

Query: 541 PGSSVIEVDGKAHEFVVGDISHLRTEEIYKVLNLINSVYHESH 584
           PGSSVIEVDGKAH+FVVGDISHL+TEEIYKVLNLINSVYHESH
Sbjct: 541 PGSSVIEVDGKAHDFVVGDISHLQTEEIYKVLNLINSVYHESH 583

[Close]

BLAST of CSPI02G01190 vs. NCBI nr
Match: XP_011648657.1 (pentatricopeptide repeat-containing protein At4g38010 isoform X2 [Cucumis sativus])

HSP 1 Score: 1094.0 bits (2828), Expect = 0.0e+00
Identity = 540/583 (92.62%), Postives = 543/583 (93.14%), Query Frame = 0


Query: 1   MFNLKWVLLDSIKDCKNLRTFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60
           MFNLKWVLLDSIKDCKNLR FRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY
Sbjct: 1   MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60

Query: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFLG 120
           LEQGNTRLGSFPFNSLINGYVG                                     G
Sbjct: 61  LEQGNTRLGSFPFNSLINGYVG-------------------------------------G 120

Query: 121 SREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISG 180
           SREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISG 180

Query: 181 FMKAGHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLG 240
           FMKAGHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLG 240

Query: 241 NAMLDMYVKNGCFYEAKKIFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300
           NAMLDMYVKNGCFYEAK IFDELPTRDIVSWTIMITGLVQSDHPK+SLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGIS 300

Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKI 360
           PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKI
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKI 360

Query: 361 FYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEAMIISGVKPNEITFLAILTACCHCGLV 420
           FYSMSQRNTFTWNALLCGLAMHGLVHEALNLFE MIISGVKPNEITFLAILTACCHCGLV
Sbjct: 361 FYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLV 420

Query: 421 DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLN 480
           DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWG+LLN
Sbjct: 421 DEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLN 480

Query: 481 ACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKA 540
           ACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKA
Sbjct: 481 ACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKA 540

Query: 541 PGSSVIEVDGKAHEFVVGDISHLRTEEIYKVLNLINSVYHESH 584
           PGSSVIEVDGKAHEFVVGDISHL+TEEIYKVLNLINSVYHESH
Sbjct: 541 PGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLINSVYHESH 546

[Close]

BLAST of CSPI02G01190 vs. TAIR 10
Match: AT4G38010.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 595.5 bits (1534), Expect = 4.6e-170
Identity = 297/547 (54.30%), Postives = 379/547 (69.29%), Query Frame = 0


Query: 5   KWVLLDSIKDCKNLRTFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDYLEQG 64
           K VLL+ I  C +LR F+QI  QL+T  L+ DD + +KV+ F     ++  Y+   L   
Sbjct: 6   KSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSI 65

Query: 65  NTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFLGSREG 124
            + L SF +N+L++ Y   + P++ +  Y+  V +GF PDMFTFP + KAC  F G REG
Sbjct: 66  RSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREG 125

Query: 125 RQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKA 184
           +Q+HG+V K+G   D YVQNSL+  YG CG+   A KVF EM VRDVVSW  +I+GF + 
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT 185

Query: 185 GHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFK-VNLVLGNAM 244
           G + EA+  F +MDVEP++ T V VL +  R G L  GKGIHG+I +R   ++L  GNA+
Sbjct: 186 GLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNAL 245

Query: 245 LDMYVKNGCFYEAKKIFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRT-LGISPD 304
           +DMYVK     +A ++F EL  +D VSW  MI+GLV  +  KE+++LFS+M+T  GI PD
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305

Query: 305 AIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFY 364
             ILTSVLSACASLG +D G WVHEYI   GIKWD HIGTAIVDMYAKCG IE AL+IF 
Sbjct: 306 GHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFN 365

Query: 365 SMSQRNTFTWNALLCGLAMHGLVHEALNLFEAMIISGVKPNEITFLAILTACCHCGLVDE 424
            +  +N FTWNALL GLA+HG   E+L  FE M+  G KPN +TFLA L ACCH GLVDE
Sbjct: 366 GIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDE 425

Query: 425 GRKYFDNM-SKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLNA 484
           GR+YF  M S+ YNL PKLEHYGCMIDL CRAGLL+EA+EL + MP+KPDV I G +L+A
Sbjct: 426 GRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSA 485

Query: 485 CTTVGNI-ELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKA 544
           C   G + EL   I D  L+++ +DSGV+VLLSNI A N+RW +V R+RRLMK +G+ K 
Sbjct: 486 CKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKV 545

Query: 545 PGSSVIE 548
           PGSS IE
Sbjct: 546 PGSSYIE 552

[Close]

BLAST of CSPI02G01190 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 449.1 bits (1154), Expect = 5.3e-126
Identity = 240/607 (39.54%), Postives = 353/607 (58.15%), Query Frame = 0


Query: 8   LLDSIKDCKNLRTFRQIHAQLVTSGLVYDDFVTSKVMEFFA-NFVEYGDYACDYLEQGNT 67
           LL  ++ CK L   +QI AQ++ +GL+ D F +S+++ F A +   Y DY+   L +G  
Sbjct: 56  LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKIL-KGIE 115

Query: 68  RLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFV---PDMFTFPVLLKACSNFLGSRE 127
               F +N  I G+   E P+ +  +Y++M+R G     PD FT+PVL K C++   S  
Sbjct: 116 NPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSL 175

Query: 128 GRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMK 187
           G  + G V+KL L    +V N+ I  + +CGD   A KVFDE  VRD+VSWN LI+G+ K
Sbjct: 176 GHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKK 235

Query: 188 AGHFDEAISVFFRMD---VEPSMTTLVSVLAACARNGDLCTGKGIHGVI-ERRFKVNLVL 247
            G  ++AI V+  M+   V+P   T++ ++++C+  GDL  GK  +  + E   ++ + L
Sbjct: 236 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 295

Query: 248 GNAMLDMYVKNGCFYEAKKIFDELPTRDIVSWTIMITGL--------------------- 307
            NA++DM+ K G  +EA++IFD L  R IVSWT MI+G                      
Sbjct: 296 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 355

Query: 308 ----------VQSDHPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEY 367
                     VQ+   +++L LF  M+T    PD I +   LSAC+ LG LD G W+H Y
Sbjct: 356 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 415

Query: 368 INQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEA 427
           I +  +  ++ +GT++VDMYAKCG I  AL +F+ +  RN+ T+ A++ GLA+HG    A
Sbjct: 416 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 475

Query: 428 LNLFEAMIISGVKPNEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMID 487
           ++ F  MI +G+ P+EITF+ +L+ACCH G++  GR YF  M   +NL P+L+HY  M+D
Sbjct: 476 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVD 535

Query: 488 LFCRAGLLEEAVELARTMPMKPDVLIWGVLLNACTTVGNIELSHRIQDYILELDHDDSGV 547
           L  RAGLLEEA  L  +MPM+ D  +WG LL  C   GN+EL  +    +LELD  DSG+
Sbjct: 536 LLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGI 595

Query: 548 FVLLSNISAINQRWSNVTRLRRLMKDRGVRKAPGSSVIEVDGKAHEFVVGDISHLRTEEI 576
           +VLL  +      W +  R RR+M +RGV K PG S IEV+G   EF+V D S   +E+I
Sbjct: 596 YVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKI 655

[Close]

BLAST of CSPI02G01190 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 429.1 bits (1102), Expect = 5.7e-120
Identity = 226/606 (37.29%), Postives = 359/606 (59.24%), Query Frame = 0


Query: 9   LDSIKDCKNLRTFRQIHAQLVTSGLVYDDFVTSKVMEF--FANFVEYGDYACDY---LEQ 68
           L  + +CK L++ R IHAQ++  GL   ++  SK++EF   +   E   YA      +++
Sbjct: 37  LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96

Query: 69  GNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFLGSRE 128
            N  +    +N++  G+     P  A+ +Y  M+  G +P+ +TFP +LK+C+     +E
Sbjct: 97  PNLLI----WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKE 156

Query: 129 GRQVHGVVVKLGL---------LADHYVQN----------------------SLIRCYGA 188
           G+Q+HG V+KLG          L   YVQN                      +LI+ Y +
Sbjct: 157 GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYAS 216

Query: 189 CGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAISVF---FRMDVEPSMTTLVSV 248
            G    A K+FDE+ V+DVVSWN++ISG+ + G++ EA+ +F    + +V P  +T+V+V
Sbjct: 217 RGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTV 276

Query: 249 LAACARNGDLCTGKGIH-GVIERRFKVNLVLGNAMLDMYVKNGCFYEAKKIFDELPTRDI 308
           ++ACA++G +  G+ +H  + +  F  NL + NA++D+Y K G    A  +F+ LP +D+
Sbjct: 277 VSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV 336

Query: 309 VSWTIMITGLVQSDHPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEY 368
           +SW  +I G    +  KE+L LF  M   G +P+ + + S+L ACA LG +D G W+H Y
Sbjct: 337 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 396

Query: 369 INQR--GIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVH 428
           I++R  G+     + T+++DMYAKCG IE A ++F S+  ++  +WNA++ G AMHG   
Sbjct: 397 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRAD 456

Query: 429 EALNLFEAMIISGVKPNEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCM 488
            + +LF  M   G++P++ITF+ +L+AC H G++D GR  F  M++ Y + PKLEHYGCM
Sbjct: 457 ASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCM 516

Query: 489 IDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLNACTTVGNIELSHRIQDYILELDHDDS 548
           IDL   +GL +EA E+   M M+PD +IW  LL AC   GN+EL     + +++++ ++ 
Sbjct: 517 IDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENP 576

Query: 549 GVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKAPGSSVIEVDGKAHEFVVGDISHLRTE 573
           G +VLLSNI A   RW+ V + R L+ D+G++K PG S IE+D   HEF++GD  H R  
Sbjct: 577 GSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNR 636

[Close]

BLAST of CSPI02G01190 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 424.9 bits (1091), Expect = 1.1e-118
Identity = 226/603 (37.48%), Postives = 346/603 (57.38%), Query Frame = 0


Query: 12  IKDCKNLRTFRQIHAQLVTSGLVYDDFVTSKV--MEFFANF--VEYGDYACDYLEQGNTR 71
           I+ C +LR  +Q H  ++ +G   D +  SK+  M   ++F  +EY     D + + N  
Sbjct: 37  IERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPN-- 96

Query: 72  LGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDG-FVPDMFTFPVLLKACSNFLGSREGRQ 131
             SF +N+LI  Y  G  P +++  +  MV +    P+ +TFP L+KA +       G+ 
Sbjct: 97  --SFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 156

Query: 132 VHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGH 191
           +HG+ VK  + +D +V NSLI CY +CGD   A KVF  +  +DVVSWNS+I+GF++ G 
Sbjct: 157 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 216

Query: 192 FDEAISVFFRM---DVEPSMTTLVSVLAACARNGDLCTGKGIHGVI-ERRFKVNLVLGNA 251
            D+A+ +F +M   DV+ S  T+V VL+ACA+  +L  G+ +   I E R  VNL L NA
Sbjct: 217 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 276

Query: 252 MLDMYVKNGCFYEAKKIFD-------------------------------ELPTRDIVSW 311
           MLDMY K G   +AK++FD                                +P +DIV+W
Sbjct: 277 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 336

Query: 312 TIMITGLVQSDHPKESLELF-SMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYIN 371
             +I+   Q+  P E+L +F  +     +  + I L S LSACA +G L+ G W+H YI 
Sbjct: 337 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 396

Query: 372 QRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEALN 431
           + GI+ + H+ +A++ MY+KCG +E + ++F S+ +R+ F W+A++ GLAMHG  +EA++
Sbjct: 397 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 456

Query: 432 LFEAMIISGVKPNEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLF 491
           +F  M  + VKPN +TF  +  AC H GLVDE    F  M   Y ++P+ +HY C++D+ 
Sbjct: 457 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 516

Query: 492 CRAGLLEEAVELARTMPMKPDVLIWGVLLNACTTVGNIELSHRIQDYILELDHDDSGVFV 551
            R+G LE+AV+    MP+ P   +WG LL AC    N+ L+      +LEL+  + G  V
Sbjct: 517 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHV 576

Query: 552 LLSNISAINQRWSNVTRLRRLMKDRGVRKAPGSSVIEVDGKAHEFVVGDISHLRTEEIYK 574
           LLSNI A   +W NV+ LR+ M+  G++K PG S IE+DG  HEF+ GD +H  +E++Y 
Sbjct: 577 LLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYG 635

[Close]

BLAST of CSPI02G01190 vs. TAIR 10
Match: AT1G31430.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 423.3 bits (1087), Expect = 3.1e-118
Identity = 221/541 (40.85%), Postives = 325/541 (60.07%), Query Frame = 0


Query: 73  FNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFLGSREGRQVHGVVV 132
           +N ++     G+     ++++  +   G  PD FT PV+LK+        EG +VHG  V
Sbjct: 14  YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73

Query: 133 KLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAIS 192
           K GL  D YV NSL+  Y + G      KVFDEM  RDVVSWN LIS ++  G F++AI 
Sbjct: 74  KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133

Query: 193 VFFRMDVEPSMT----TLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLGNAMLDMYV 252
           VF RM  E ++     T+VS L+AC+   +L  G+ I+  +   F++++ +GNA++DM+ 
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFC 193

Query: 253 KNGCFYEAKKIFDEL-------------------------------PTRDIVSWTIMITG 312
           K GC  +A+ +FD +                               P +D+V WT M+ G
Sbjct: 194 KCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNG 253

Query: 313 LVQSDHPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWD 372
            VQ +   E+LELF  M+T GI PD  +L S+L+ CA  G L+ G W+H YIN+  +  D
Sbjct: 254 YVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVD 313

Query: 373 IHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEAMII 432
             +GTA+VDMYAKCGCIE AL++FY + +R+T +W +L+ GLAM+G+   AL+L+  M  
Sbjct: 314 KVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMEN 373

Query: 433 SGVKPNEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLE 492
            GV+ + ITF+A+LTAC H G V EGRK F +M++ +N+ PK EH  C+IDL CRAGLL+
Sbjct: 374 VGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLD 433

Query: 493 EAVELARTMPMKPD---VLIWGVLLNACTTVGNIELSHRIQDYILELDHDDSGVFVLLSN 552
           EA EL   M  + D   V ++  LL+A    GN++++ R+ + + +++  DS    LL++
Sbjct: 434 EAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLAS 493

Query: 553 ISAINQRWSNVTRLRRLMKDRGVRKAPGSSVIEVDGKAHEFVVGD--ISHLRTEEIYKVL 574
           + A   RW +VT +RR MKD G+RK PG S IE+DG  HEF+VGD  +SH + +EI  +L
Sbjct: 494 VYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSML 553

The following BLAST results are available for this feature:

BLAST of CSPI02G01190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZK1	6.5e-169	54.30	Pentatricopeptide repeat-containing protein At4g38010 OS=Arabidopsis thaliana OX...	[more]
Q9SJZ3	7.5e-125	39.54	Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop...	[more]
Q9LN01	8.0e-119	37.29	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
O82380	1.5e-117	37.48	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
Q9C866	4.4e-117	40.85	Pentatricopeptide repeat-containing protein At1g31430 OS=Arabidopsis thaliana OX...	[more]

BLAST of CSPI02G01190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LF19	0.0e+00	98.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004700 PE=4 SV=1	[more]
A0A5D3CGR6	0.0e+00	96.23	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C7P6	0.0e+00	96.05	pentatricopeptide repeat-containing protein At4g38010 isoform X1 OS=Cucumis melo...	[more]
A0A5A7V3V4	0.0e+00	95.88	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1HYD9	5.8e-306	87.50	pentatricopeptide repeat-containing protein At4g38010 isoform X1 OS=Cucurbita ma...	[more]

BLAST of CSPI02G01190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031736963.1	0.0e+00	98.80	pentatricopeptide repeat-containing protein At4g38010 isoform X1 [Cucumis sativu...	[more]
TYK10715.1	0.0e+00	96.23	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008458315.1	0.0e+00	96.05	PREDICTED: pentatricopeptide repeat-containing protein At4g38010 isoform X1 [Cuc...	[more]
KAA0061557.1	0.0e+00	95.88	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_011648657.1	0.0e+00	92.62	pentatricopeptide repeat-containing protein At4g38010 isoform X2 [Cucumis sativu...	[more]

BLAST of CSPI02G01190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38010.1	4.6e-170	54.30	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT2G22410.1	5.3e-126	39.54	SLOW GROWTH 1	[more]
AT1G08070.1	5.7e-120	37.29	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G29760.1	1.1e-118	37.48	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G31430.1	3.1e-118	40.85	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 228..319 e-value: 1.3E-22 score: 82.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 119..227 e-value: 3.4E-20 score: 74.7 coord: 320..434 e-value: 1.4E-29 score: 105.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 7..118 e-value: 2.1E-9 score: 38.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 435..499 e-value: 1.1E-5 score: 27.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 172..197 e-value: 7.7E-7 score: 26.9 coord: 142..171 e-value: 7.8E-5 score: 20.6 coord: 241..269 e-value: 6.6E-4 score: 17.7 coord: 370..404 e-value: 1.4E-7 score: 29.3 coord: 73..104 e-value: 5.0E-6 score: 24.3 coord: 269..303 e-value: 1.4E-6 score: 26.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 241..266 e-value: 4.2E-4 score: 20.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 367..416 e-value: 1.8E-12 score: 47.3 coord: 169..214 e-value: 1.1E-7 score: 32.0 coord: 267..314 e-value: 4.4E-7 score: 30.0 coord: 73..116 e-value: 9.8E-8 score: 32.1
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 442..466 e-value: 1.0E-5 score: 25.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 69..103 score: 10.029647
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 368..402 score: 12.199985
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 170..200 score: 10.544828
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 267..301 score: 11.39981
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 403..433 score: 8.670445
None	No IPR available	PANTHER	PTHR47928:SF62	OS04G0488200 PROTEIN	coord: 251..580 coord: 2..188
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 188..252
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 251..580
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 2..188
None	No IPR available	PANTHER	PTHR47928:SF62	OS04G0488200 PROTEIN	coord: 188..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G01190.1	CSPI02G01190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding