CSPI01G21100 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCATCCCAATATGGAGCCCCTCTCCAACTTCAACTTGGAACTTTGTCTCTCTCCTCCCTCTTCATCTCCTTCCACCACCACTTCCACCACCACTTCCACCCTTCCCCTCGCCTCCAATTCAACTTCCCAACCCAACCATATCACTCCTATCGGACTCTTCACACCTGATCTTACCGAGATCCAGGTACCATTTCAACTCATCTCTTTCTTTTTCTTTTTCCTCACTTAACCATGCAGGACCCTTTCTGTTCAAATTTCAAAACTCTCTCATCTGTCATTTCCTATCAACTTTTTTTTTTTGCTTAATCAAGACTGTGTGTGTCTATATATATGTAATTACTTATCCCATATTCTTGTATTGTTTGGATTAATGTAGGCAAAGGCAATAATAGTACAAGCCACGAGACAAATGGAGGCCGAGAGATCAAGATGGAGGACGTGTCGAATTAGTTCATCGGCAGAAAGAGTATTGATGACGAACGGGGAAGCTAGCCCCTCCTTGAGGAGATCATTGCAGAGGTTTTTACAAAAGAGAAAGCTTCGCATTCAAACACTTTCACCCTACGCTCACTAACTTTCCAAATTTTTGGAATAATCGGTGCCTTCTTCATTCTCTCTTCTCTCTTGTCATTTTTCTTCTTTTCCTAGCTAGGAGCTAAGTCTGTGTTTTTGGGTGGTACGTTTTGTATTTGTGCATACTTGGAGCTTATTAATTTTCCA TCTCATCCCAATATGGAGCCCCTCTCCAACTTCAACTTGGAACTTTGTCTCTCTCCTCCCTCTTCATCTCCTTCCACCACCACTTCCACCACCACTTCCACCCTTCCCCTCGCCTCCAATTCAACTTCCCAACCCAACCATATCACTCCTATCGGACTCTTCACACCTGATCTTACCGAGATCCAGGCAAAGGCAATAATAGTACAAGCCACGAGACAAATGGAGGCCGAGAGATCAAGATGGAGGACGTGTCGAATTAGTTCATCGGCAGAAAGAGTATTGATGACGAACGGGGAAGCTAGCCCCTCCTTGAGGAGATCATTGCAGAGGTTTTTACAAAAGAGAAAGCTTCGCATTCAAACACTTTCACCCTACGCTCACTAACTTTCCAAATTTTTGGAATAATCGGTGCCTTCTTCATTCTCTCTTCTCTCTTGTCATTTTTCTTCTTTTCCTAGCTAGGAGCTAAGTCTGTGTTTTTGGGTGGTACGTTTTGTATTTGTGCATACTTGGAGCTTATTAATTTTCCA ATGGAGCCCCTCTCCAACTTCAACTTGGAACTTTGTCTCTCTCCTCCCTCTTCATCTCCTTCCACCACCACTTCCACCACCACTTCCACCCTTCCCCTCGCCTCCAATTCAACTTCCCAACCCAACCATATCACTCCTATCGGACTCTTCACACCTGATCTTACCGAGATCCAGGCAAAGGCAATAATAGTACAAGCCACGAGACAAATGGAGGCCGAGAGATCAAGATGGAGGACGTGTCGAATTAGTTCATCGGCAGAAAGAGTATTGATGACGAACGGGGAAGCTAGCCCCTCCTTGAGGAGATCATTGCAGAGGTTTTTACAAAAGAGAAAGCTTCGCATTCAAACACTTTCACCCTACGCTCACTAA MEPLSNFNLELCLSPPSSSPSTTTSTTTSTLPLASNSTSQPNHITPIGLFTPDLTEIQAKAIIVQATRQMEAERSRWRTCRISSSAERVLMTNGEASPSLRRSLQRFLQKRKLRIQTLSPYAH* Homology
BLAST of CSPI01G21100 vs. ExPASy Swiss-Prot
Match: Q8LBM2 (Protein TIFY 5A OS=Arabidopsis thaliana OX=3702 GN=TIFY5A PE=1 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 4.1e-04 Identity = 49/131 (37.40%), Postives = 73/131 (55.73%), Query Frame = 0
BLAST of CSPI01G21100 vs. ExPASy TrEMBL
Match: A0A0A0LX13 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G435790 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 1.7e-53 Identity = 119/123 (96.75%), Postives = 119/123 (96.75%), Query Frame = 0
BLAST of CSPI01G21100 vs. ExPASy TrEMBL
Match: A0A1S3BA64 (protein TIFY 5A-like OS=Cucumis melo OX=3656 GN=LOC103487726 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 8.7e-42 Identity = 102/123 (82.93%), Postives = 109/123 (88.62%), Query Frame = 0
BLAST of CSPI01G21100 vs. ExPASy TrEMBL
Match: A0A6J1EN30 (protein TIFY 5A-like OS=Cucurbita moschata OX=3662 GN=LOC111434085 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25 Identity = 80/123 (65.04%), Postives = 91/123 (73.98%), Query Frame = 0
BLAST of CSPI01G21100 vs. ExPASy TrEMBL
Match: A0A6J1KQP6 (protein TIFY 5A-like OS=Cucurbita maxima OX=3661 GN=LOC111495613 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 5.8e-22 Identity = 77/123 (62.60%), Postives = 88/123 (71.54%), Query Frame = 0
BLAST of CSPI01G21100 vs. ExPASy TrEMBL
Match: A0A6J1CG02 (protein TIFY 5A-like OS=Momordica charantia OX=3673 GN=LOC111010877 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 3.2e-12 Identity = 61/128 (47.66%), Postives = 78/128 (60.94%), Query Frame = 0
BLAST of CSPI01G21100 vs. NCBI nr
Match: XP_004149668.1 (protein TIFY 5A [Cucumis sativus] >KGN65534.1 hypothetical protein Csa_020031 [Cucumis sativus]) HSP 1 Score: 218.4 bits (555), Expect = 3.5e-53 Identity = 119/123 (96.75%), Postives = 119/123 (96.75%), Query Frame = 0
BLAST of CSPI01G21100 vs. NCBI nr
Match: XP_008444384.1 (PREDICTED: protein TIFY 5A-like [Cucumis melo]) HSP 1 Score: 179.5 bits (454), Expect = 1.8e-41 Identity = 102/123 (82.93%), Postives = 109/123 (88.62%), Query Frame = 0
BLAST of CSPI01G21100 vs. NCBI nr
Match: XP_023520316.1 (protein TIFY 5A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 129.8 bits (325), Expect = 1.6e-26 Identity = 82/123 (66.67%), Postives = 92/123 (74.80%), Query Frame = 0
BLAST of CSPI01G21100 vs. NCBI nr
Match: KAG7019513.1 (Protein TIFY 5A [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 129.0 bits (323), Expect = 2.8e-26 Identity = 82/123 (66.67%), Postives = 92/123 (74.80%), Query Frame = 0
BLAST of CSPI01G21100 vs. NCBI nr
Match: XP_022927150.1 (protein TIFY 5A-like [Cucurbita moschata]) HSP 1 Score: 125.9 bits (315), Expect = 2.4e-25 Identity = 80/123 (65.04%), Postives = 91/123 (73.98%), Query Frame = 0
BLAST of CSPI01G21100 vs. TAIR 10
Match: AT1G30135.1 (jasmonate-zim-domain protein 8 ) HSP 1 Score: 45.8 bits (107), Expect = 2.9e-05 Identity = 49/131 (37.40%), Postives = 73/131 (55.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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