CSPI01G11890 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI01G11890
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr1: 7487133 .. 7487531 (+)
RNA-Seq ExpressionCSPI01G11890
SyntenyCSPI01G11890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACGGAAAAAACAGCCAGGAATTATGGACTTGAAGCTCAGCCGGAAACTCCAATTGATCGTACCCTCCATTACAATAAGCACAGTGAATATTAACTTCTTGTGTAAAGCTTCTTCGGTCATTTTCCAGTAGGCTTTTCATTATCTCAACGGCTCTTTTATAATTTTCTATATAGTTTTTGTCAGCTAAATGGGCTACAGGCCGAACCCGGAGTTTTCGAGGTGGGGTTAGTGGAAAGTCTTTGATTTGGTGGACAGTGGGTGGGGGGTAGCAATCTGTGCCCTTGGCGCCGTCGTGCAAGTCGGCAGGACCACTCGTGTTGAGTGGCGGGGTTACTACTGGATTATAAGGCGGAGGGATATATTGGGAAGAGAGTTGAAGCTCCGTAGAGAGTGG

mRNA sequence

ATGGAACGGAAAAAACAGCCAGGAATTATGGACTTGAAGCTCAGCCGGAAACTCCAATTGATCGTACCCTCCATTACAATAAGCACAGTGAATATTAACTTCTTGTGTAAAGCTTCTTCGGTCATTTTCCATGGGTGGGGGGTAGCAATCTGTGCCCTTGGCGCCGTCGTGCAAGTCGGCAGGACCACTCGTGTTGAGTGGCGGGGTTACTACTGGATTATAAGGCGGAGGGATATATTGGGAAGAGAGTTGAAGCTCCGTAGAGAGTGG

Coding sequence (CDS)

ATGGAACGGAAAAAACAGCCAGGAATTATGGACTTGAAGCTCAGCCGGAAACTCCAATTGATCGTACCCTCCATTACAATAAGCACAGTGAATATTAACTTCTTGTGTAAAGCTTCTTCGGTCATTTTCCATGGGTGGGGGGTAGCAATCTGTGCCCTTGGCGCCGTCGTGCAAGTCGGCAGGACCACTCGTGTTGAGTGGCGGGGTTACTACTGGATTATAAGGCGGAGGGATATATTGGGAAGAGAGTTGAAGCTCCGTAGAGAGTGG

Protein sequence

MERKKQPGIMDLKLSRKLQLIVPSITISTVNINFLCKASSVIFHGWGVAICALGAVVQVGRTTRVEWRGYYWIIRRRDILGRELKLRREW
Homology
[Close]
BLAST of CSPI01G11890 vs. ExPASy TrEMBL
Match: A0A0A0LRV4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073630 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.5e-30
Identity = 74/87 (85.06%), Postives = 74/87 (85.06%), Query Frame = 0 

Query: 1  MERKKQPGIMDLKLSRKLQLIVPSITISTVNINFLCKASSVIFHGWGVAICALGAVVQVG 60
          MERKKQPGIMDLKLSRKLQL             FLCKASSVIFHGWGVAICALGAVVQVG
Sbjct: 1  MERKKQPGIMDLKLSRKLQL--------RSTPPFLCKASSVIFHGWGVAICALGAVVQVG 60

Query: 61 RTTRVEWRGYYWIIRRRDILGRELKLR 88
          RTTRVEWRGYYWIIRRRDILGRELKLR
Sbjct: 61 RTTRVEWRGYYWIIRRRDILGRELKLR 79

[Close]
BLAST of CSPI01G11890 vs. NCBI nr
Match: KGN64655.1 (hypothetical protein Csa_014267 [Cucumis sativus])

HSP 1 Score: 141.7 bits (356), Expect = 3.0e-30
Identity = 74/87 (85.06%), Postives = 74/87 (85.06%), Query Frame = 0 

Query: 1  MERKKQPGIMDLKLSRKLQLIVPSITISTVNINFLCKASSVIFHGWGVAICALGAVVQVG 60
          MERKKQPGIMDLKLSRKLQL             FLCKASSVIFHGWGVAICALGAVVQVG
Sbjct: 1  MERKKQPGIMDLKLSRKLQL--------RSTPPFLCKASSVIFHGWGVAICALGAVVQVG 60

Query: 61 RTTRVEWRGYYWIIRRRDILGRELKLR 88
          RTTRVEWRGYYWIIRRRDILGRELKLR
Sbjct: 61 RTTRVEWRGYYWIIRRRDILGRELKLR 79

The following BLAST results are available for this feature:
BLAST of CSPI01G11890 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI01G11890 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRV41.5e-3085.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073630 PE=4 SV=1[more]
BLAST of CSPI01G11890 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64655.13.0e-3085.06hypothetical protein Csa_014267 [Cucumis sativus][more]
BLAST of CSPI01G11890 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G11890.1CSPI01G11890.1mRNA