CSPI01G08260 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G08260
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	ENDO3c domain-containing protein
Location	Chr1: 5218695 .. 5220985 (+)
RNA-Seq Expression	CSPI01G08260
Synteny	CSPI01G08260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACGAAGCCCACGCTAAAGAGAAGCCCAAAACAGGGATCCATATGATGAAGGAACGAATCGGCTTCGAAAATTGACGGAACGATGAAGAAGACGACCGGTAAGAAGAGGCGTCTTCAAAAACCAGAACCACCGGCCGATTCTCACTCCGATGGACCTCAATTTAAATCAATCAGAACTGTTAATGGCTTCAATTGCTCGACTATTGACCCGTATCCAGCTCATTCTTCTCCCACTTCGGACGAATGTCTGTCCGTGAGGGATGATCTGTTGAATCTTCATGGCTTCCCGCGAGAGTTTCTTAAGTATAGGAAGGAGCGAGAGAGGCTGAGCGAGTGCTGCTCTGTCGTGGACGGCGTCCGCGCTGAGCACCGGGATAATGTGGAGTCGGAGTTCGTCGATGAGAAGGAAAGCGTTTTGGATGGATTGGTGAAAACTGTGCTATCGCAGAACACTACGGAGGCTAATTCCGAGAGGGCTTTTGCTTCTCTCAAGTCCGCCTTTGCTGCTTGGGAGGATGTGAGTCTTCTGCTTTCTTTGATTGGATTACGGCTGTTCTTTCTTTTTATGTTGGATGACATGTTCTTAGGACAGATTTCTGTCAATTTCTTTTTGCAATGGAACGTCAATGAACAGGATTTAGAAAAATGGAAACTGAATTCTCTTAGTTAGTTCTTGTTTTGTCAATGTAATATTTTTATCCAATATCATTATTTAGTAGTTTTTCTTGTGTCGTTCTTGCATAAACCATAACCATGAGTCAATTCTGAACTTGAACATTTCTATTTTCTAATCTTTTGAAAGTTATCTTTCATAATAAATCTTATATTTAGTTTAAGGGCAAACAAAATTGCTATCTGAAATTCAAATTTGGACAATGTGATTGGAGAGTTGGAGTATGTAGGACAGACCTTCAATGGTTTTTCCCAGCAATTTTGATGAAGTGTGCCTTTTAAGAAAGGGGTTTTGATTTATCATTTATGTACTCATATTTGAATGTAGGTTCTTTCAGCTGAATCCAAATGCATAGAGGATGCCATAAGATGCGGAGGATTAGCATCTACAAAAGCCTCTTGCATAAAAAATATATTGAGTTCTCTGTCAAAGAGAAGAGGCAAATTATGCTTGGAGTTCTTGCGCGATTTATCCATCGATGAAATAAAGGCAGAGCTGTCGACTTTCAAAGGAATTGGCCCCAAAACGGTATTGTTTCTCAAAAAAAAACAACTGCCTTTGTAATCTAATTTATATTTTAACATTTCAGATTTTGTCAGTTCATGGAACTATACCACCCAACTTTTGTATCCTATAAAACACAGACACTGACGCTCCTGGCACGTCTCTGTCCATTTTTCTCTTAATCTTAGGGGTTTTCAATTCTCACCCATTGATTTTTCCATCCTCAAAACCCACTGGCCACTTACATGTAACGAACGAACGTTCTTTTAATCTTCAAAGCAAATATTCACAGTTTGTTCAAATATTCACCCGTACATTTATTGTTGTAAGAAAAACAAAGTGTGTCCCAAACATGTCGTGTCCTACATTTTAAAAATTAACATGTTACCGTGTCAGCATTGCGTCGTCTGTAAATGTTTATGCTTGTGTCTTAGCCTTTACCTATTGGGATCATAGTTTAAAGGCTTCTACTGTTTTTTTCTCTTTTTTTTGTGTGTATGTGTTTTCATGGTTAGCTATGGCTTGCATTTTTCATAAAATTCCTCGAACATCTTGGTTGCTTAGTGTTATAGCATCAATAATCAATCATACAAGTTATAAATGACAGGTGGCCTGTGTCCTGATGTTCAATCTTCAGAAAGATGATTTTCCAGTGGACACTCATGTGAGTAATTGAATTACTCTTTCGGATGAGTTTGTGATCCGTGTTCTCTAAAGACCATTGAAAGGTTTTGATTCTCCAACGACATGTTTGCAGGTATTTCAGATTGCAAAGTTTGTGGGTTGGGTCCCGGATGACGCAGACAGGAACAAAACATATCTTCATCTCAACAAAAGGATCCCAAATCATCTCAAATTTGATCTCAACTGTCTTCTTTATACTCATGGAAAGCTCTGTTCGAAATGTACGAAGAAAACAGGCACCCGACAGCGAAGGGGATCTGAAGAACAATCTTGTCCTTTGTTCAAGTACTCCTATAACCCTTAAATCTGTGAATATAGATGTATTTACCAAAAGTTTATTTATGAAAGCTTCTAATCCTTTTTTTCTGTTACTGTCTCTTTCTTTTCTTTTGTTCCTACATTTTTAGAAAAATGCCATGCTAATGTCCAC

mRNA sequence

CACGAAGCCCACGCTAAAGAGAAGCCCAAAACAGGGATCCATATGATGAAGGAACGAATCGGCTTCGAAAATTGACGGAACGATGAAGAAGACGACCGGTAAGAAGAGGCGTCTTCAAAAACCAGAACCACCGGCCGATTCTCACTCCGATGGACCTCAATTTAAATCAATCAGAACTGTTAATGGCTTCAATTGCTCGACTATTGACCCGTATCCAGCTCATTCTTCTCCCACTTCGGACGAATGTCTGTCCGTGAGGGATGATCTGTTGAATCTTCATGGCTTCCCGCGAGAGTTTCTTAAGTATAGGAAGGAGCGAGAGAGGCTGAGCGAGTGCTGCTCTGTCGTGGACGGCGTCCGCGCTGAGCACCGGGATAATGTGGAGTCGGAGTTCGTCGATGAGAAGGAAAGCGTTTTGGATGGATTGGTGAAAACTGTGCTATCGCAGAACACTACGGAGGCTAATTCCGAGAGGGCTTTTGCTTCTCTCAAGTCCGCCTTTGCTGCTTGGGAGGATGTTCTTTCAGCTGAATCCAAATGCATAGAGGATGCCATAAGATGCGGAGGATTAGCATCTACAAAAGCCTCTTGCATAAAAAATATATTGAGTTCTCTGTCAAAGAGAAGAGGCAAATTATGCTTGGAGTTCTTGCGCGATTTATCCATCGATGAAATAAAGGCAGAGCTGTCGACTTTCAAAGGAATTGGCCCCAAAACGGTGGCCTGTGTCCTGATGTTCAATCTTCAGAAAGATGATTTTCCAGTGGACACTCATGTATTTCAGATTGCAAAGTTTGTGGGTTGGGTCCCGGATGACGCAGACAGGAACAAAACATATCTTCATCTCAACAAAAGGATCCCAAATCATCTCAAATTTGATCTCAACTGTCTTCTTTATACTCATGGAAAGCTCTGTTCGAAATGTACGAAGAAAACAGGCACCCGACAGCGAAGGGGATCTGAAGAACAATCTTGTCCTTTGTTCAAGTACTCCTATAACCCTTAAATCTGTGAATATAGATGTATTTACCAAAAGTTTATTTATGAAAGCTTCTAATCCTTTTTTTCTGTTACTGTCTCTTTCTTTTCTTTTGTTCCTACATTTTTAGAAAAATGCCATGCTAATGTCCAC

Coding sequence (CDS)

ATGAAGAAGACGACCGGTAAGAAGAGGCGTCTTCAAAAACCAGAACCACCGGCCGATTCTCACTCCGATGGACCTCAATTTAAATCAATCAGAACTGTTAATGGCTTCAATTGCTCGACTATTGACCCGTATCCAGCTCATTCTTCTCCCACTTCGGACGAATGTCTGTCCGTGAGGGATGATCTGTTGAATCTTCATGGCTTCCCGCGAGAGTTTCTTAAGTATAGGAAGGAGCGAGAGAGGCTGAGCGAGTGCTGCTCTGTCGTGGACGGCGTCCGCGCTGAGCACCGGGATAATGTGGAGTCGGAGTTCGTCGATGAGAAGGAAAGCGTTTTGGATGGATTGGTGAAAACTGTGCTATCGCAGAACACTACGGAGGCTAATTCCGAGAGGGCTTTTGCTTCTCTCAAGTCCGCCTTTGCTGCTTGGGAGGATGTTCTTTCAGCTGAATCCAAATGCATAGAGGATGCCATAAGATGCGGAGGATTAGCATCTACAAAAGCCTCTTGCATAAAAAATATATTGAGTTCTCTGTCAAAGAGAAGAGGCAAATTATGCTTGGAGTTCTTGCGCGATTTATCCATCGATGAAATAAAGGCAGAGCTGTCGACTTTCAAAGGAATTGGCCCCAAAACGGTGGCCTGTGTCCTGATGTTCAATCTTCAGAAAGATGATTTTCCAGTGGACACTCATGTATTTCAGATTGCAAAGTTTGTGGGTTGGGTCCCGGATGACGCAGACAGGAACAAAACATATCTTCATCTCAACAAAAGGATCCCAAATCATCTCAAATTTGATCTCAACTGTCTTCTTTATACTCATGGAAAGCTCTGTTCGAAATGTACGAAGAAAACAGGCACCCGACAGCGAAGGGGATCTGAAGAACAATCTTGTCCTTTGTTCAAGTACTCCTATAACCCTTAA

Protein sequence

MKKTTGKKRRLQKPEPPADSHSDGPQFKSIRTVNGFNCSTIDPYPAHSSPTSDECLSVRDDLLNLHGFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVDEKESVLDGLVKTVLSQNTTEANSERAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSKRRGKLCLEFLRDLSIDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGTRQRRGSEEQSCPLFKYSYNP*

Homology

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BLAST of CSPI01G08260 vs. ExPASy Swiss-Prot
Match: F4JCQ3 (Putative DNA glycosylase At3g47830 OS=Arabidopsis thaliana OX=3702 GN=At3g47830 PE=3 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 2.0e-89
Identity = 176/296 (59.46%), Postives = 217/296 (73.31%), Query Frame = 0


Query: 7   KKRRLQKPEPPADSHSDGPQFKSIRTVNGFNCSTIDPYPAHSSPTSDECLSVRDDLLNLH 66
           K++RL K     D  S  P  KS  TV+G N     PYP    PT++EC  VRD LL+LH
Sbjct: 6   KRKRLNK----YDGESKTPANKS--TVDGGN-----PYPTLLRPTAEECRDVRDALLSLH 65

Query: 67  GFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVD--EKESVLDGLVKTVLSQNT 126
           GFP EF  YR++R R     S VD    + + N++SE ++  E+ESVLDGLVK +LSQNT
Sbjct: 66  GFPPEFANYRRQRLR---SFSAVDD--HDTQCNLKSETLNETEEESVLDGLVKILLSQNT 125

Query: 127 TEANSERAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSKRRGK 186
           TE+NS+RAFASLK+ F  W+DVL+AESK IE+AIRCGGLA  KA CIKNIL+ L   RG+
Sbjct: 126 TESNSQRAFASLKATFPKWDDVLNAESKSIENAIRCGGLAPKKAVCIKNILNRLQNERGR 185

Query: 187 LCLEFLRDLSIDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPD 246
           LCLE+LR LS++E+K ELS FKG+GPKTV+CVLMFNLQ +DFPVDTHVF+IAK +GWVP 
Sbjct: 186 LCLEYLRGLSVEEVKTELSHFKGVGPKTVSCVLMFNLQHNDFPVDTHVFEIAKALGWVPK 245

Query: 247 DADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGTRQRRGSEEQSCPL 301
            ADRNKTY+HLN++IP+ LKFDLNCLLYTHGK+CS C K     + + +    CPL
Sbjct: 246 TADRNKTYVHLNRKIPDELKFDLNCLLYTHGKICSNCKKNVAKPKAKVASPDDCPL 285

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BLAST of CSPI01G08260 vs. ExPASy Swiss-Prot
Match: C7IW64 (Protein ROS1A OS=Oryza sativa subsp. japonica OX=39947 GN=ROS1A PE=1 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 2.2e-14
Identity = 67/210 (31.90%), Postives = 104/210 (49.52%), Query Frame = 0


Query: 51   TSDECLSVRDDLLNLHGFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVDEKES 110
            +S+ C + + +   LHG     ++  K+ ++ S     VDG +A+ R  V +    +K  
Sbjct: 1346 SSNLCQNQKANSEVLHGVSSNLIENSKDDKKTSPKVP-VDGSKAK-RPRVGAG--KKKTY 1405

Query: 111  VLDGLVKTVLSQNTTEANSERAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLASTKASC 170
              D L K VL  +  +  S+ A  S+      WE +  AE K I D IR  G+ +  A  
Sbjct: 1406 DWDMLRKEVLYSHGNKERSQNAKDSID-----WETIRQAEVKEISDTIRERGMNNMLAER 1465

Query: 171  IKNILSSLSKRRGKLCLEFLRDLSIDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDT 230
            IK+ L+ L +  G + LE+LR +  D+ K  L + +G+G K+V CV +  L    FPVDT
Sbjct: 1466 IKDFLNRLVRDHGSIDLEWLRYVDSDKAKDYLLSIRGLGLKSVECVRLLTLHHMAFPVDT 1525

Query: 231  HVFQIAKFVGWVPDDADRNKTYLHLNKRIP 261
            +V +I   +GWVP         LHL +  P
Sbjct: 1526 NVGRICVRLGWVPLQPLPESLQLHLLEMYP 1546

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BLAST of CSPI01G08260 vs. ExPASy Swiss-Prot
Match: Q9SJQ6 (DNA glycosylase/AP lyase ROS1 OS=Arabidopsis thaliana OX=3702 GN=ROS1 PE=1 SV=2)

HSP 1 Score: 73.9 bits (180), Expect = 3.5e-12
Identity = 42/118 (35.59%), Postives = 63/118 (53.39%), Query Frame = 0


Query: 143  WEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSKRRGKLCLEFLRDLSIDEIKAEL 202
            W+ + +A+ K + + I+  G+    A  I+  L  L    G + LE+LRD+  D+ K  L
Sbjct: 885  WKAIRAADVKEVAETIKSRGMNHKLAERIQGFLDRLVNDHGSIDLEWLRDVPPDKAKEYL 944

Query: 203  STFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDADRNKTYLHLNKRIP 261
             +F G+G K+V CV +  L    FPVDT+V +IA  +GWVP         LHL +  P
Sbjct: 945  LSFNGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLEMYP 1002

[Close]

BLAST of CSPI01G08260 vs. ExPASy Swiss-Prot
Match: B8YIE8 (Protein ROS1C OS=Oryza sativa subsp. japonica OX=39947 GN=ROS1C PE=2 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 1.0e-11
Identity = 44/118 (37.29%), Postives = 62/118 (52.54%), Query Frame = 0


Query: 143  WEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSKRRGKLCLEFLRDLSIDEIKAEL 202
            WE V  A+ + I  AIR  G+ +  A  I+  L+ L    G + LE+LRD+  D  K  L
Sbjct: 1339 WEAVRCADVQRISHAIRERGMNNVLAERIQKFLNRLVTDHGSIDLEWLRDVPPDSAKDYL 1398

Query: 203  STFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDADRNKTYLHLNKRIP 261
             + +G+G K+V CV +  L    FPVDT+V +I   +GWVP         LHL +  P
Sbjct: 1399 LSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRICVRLGWVPIQPLPESLQLHLLELYP 1456

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BLAST of CSPI01G08260 vs. ExPASy Swiss-Prot
Match: Q9SR66 (DEMETER-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=DML2 PE=3 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 2.9e-11
Identity = 52/161 (32.30%), Postives = 82/161 (50.93%), Query Frame = 0


Query: 101 ESEFVDEKESV-LDGLVKTVLSQNTTEANSERAFASLKSAFAAWEDVLSAESKCIEDAIR 160
           ES    +K+SV  D L K   S       +ER   ++      W+ +   +   I + I 
Sbjct: 779 ESAKSTQKKSVDWDSLRKEAESGGRKRERTERTMDTVD-----WDALRCTDVHKIANIII 838

Query: 161 CGGLASTKASCIKNILSSLSKRRGKLCLEFLRDLSIDEIKAELSTFKGIGPKTVACVLMF 220
             G+ +  A  IK  L+ L K+ G + LE+LRD+  D+ K  L +  G+G K+V CV + 
Sbjct: 839 KRGMNNMLAERIKAFLNRLVKKHGSIDLEWLRDVPPDKAKEYLLSINGLGLKSVECVRLL 898

Query: 221 NLQKDDFPVDTHVFQIAKFVGWVPDDADRNKTYLHLNKRIP 261
           +L +  FPVDT+V +IA  +GWVP     ++  +HL +  P
Sbjct: 899 SLHQIAFPVDTNVGRIAVRLGWVPLQPLPDELQMHLLELYP 934

[Close]

BLAST of CSPI01G08260 vs. ExPASy TrEMBL
Match: A0A0A0LTF1 (ENDO3c domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045870 PE=4 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 1.5e-175
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDGPQFKSIRTVNGFNCSTIDPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPPADSHSDGPQFKSIRTVNGFNCSTIDPYPAHSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDGPQFKSIRTVNGFNCSTIDPYPAHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVDEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVDEKESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVDEKESVLDGLVKTVL 120

Query: 121 SQNTTEANSERAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSK 180
           SQNTTEANSERAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSIDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240
           RRGKLCLEFLRDLSIDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG
Sbjct: 181 RRGKLCLEFLRDLSIDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240

Query: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGTRQRRGSEEQSCPL 300
           WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGTRQRRGSEEQSCPL
Sbjct: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGTRQRRGSEEQSCPL 300

Query: 301 FKYSYNP 308
           FKYSYNP
Sbjct: 301 FKYSYNP 307

[Close]

BLAST of CSPI01G08260 vs. ExPASy TrEMBL
Match: A0A5D3BJ43 (Putative DNA glycosylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003430 PE=4 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 9.0e-165
Identity = 290/307 (94.46%), Postives = 294/307 (95.77%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDGPQFKSIRTVNGFNCSTIDPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPPADSHSD P+ KSIRTVNGFNCST +PYPAHSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVDEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECCS VDGVRAEH DNVESE V EKESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120

Query: 121 SQNTTEANSERAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSK 180
           SQNTTEANSERAF SLKSAF+ WEDVLSAESKCIEDAIRCGGLA TKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSIDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240
           RRGKLCLEFLRDLS+DEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG
Sbjct: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240

Query: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGTRQRRGSEEQSCPL 300
           WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTG RQR GSEEQSCPL
Sbjct: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL 300

Query: 301 FKYSYNP 308
           FKYS NP
Sbjct: 301 FKYSNNP 307

[Close]

BLAST of CSPI01G08260 vs. ExPASy TrEMBL
Match: A0A1S3AW45 (putative DNA glycosylase At3g47830 OS=Cucumis melo OX=3656 GN=LOC103483287 PE=4 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 9.0e-165
Identity = 290/307 (94.46%), Postives = 294/307 (95.77%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDGPQFKSIRTVNGFNCSTIDPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPPADSHSD P+ KSIRTVNGFNCST +PYPAHSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVDEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECCS VDGVRAEH DNVESE V EKESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120

Query: 121 SQNTTEANSERAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSK 180
           SQNTTEANSERAF SLKSAF+ WEDVLSAESKCIEDAIRCGGLA TKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSIDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240
           RRGKLCLEFLRDLS+DEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG
Sbjct: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240

Query: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGTRQRRGSEEQSCPL 300
           WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTG RQR GSEEQSCPL
Sbjct: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL 300

Query: 301 FKYSYNP 308
           FKYS NP
Sbjct: 301 FKYSNNP 307

[Close]

BLAST of CSPI01G08260 vs. ExPASy TrEMBL
Match: A0A5A7UKV1 (Putative DNA glycosylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00480 PE=4 SV=1)

HSP 1 Score: 584.7 bits (1506), Expect = 2.2e-163
Identity = 287/307 (93.49%), Postives = 293/307 (95.44%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDGPQFKSIRTVNGFNCSTIDPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPPADSHSD P+ KSIRTVNGFNCST +PYP+HSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPSHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVDEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECC  VDGVRAEH DNVESE V EKESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCFFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120

Query: 121 SQNTTEANSERAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSK 180
           SQNTTEANSERAF SLKSAF+ WEDVLSAESKCIEDAIRCGGLA TKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSIDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240
           RRGKLCLEFLRDLS+DEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG
Sbjct: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240

Query: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGTRQRRGSEEQSCPL 300
           WVPDDADRNKTYLHLN+RIPNHLKFDLNCLLYTHGKLCSKCTKKTG RQR GSEEQSCPL
Sbjct: 241 WVPDDADRNKTYLHLNRRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL 300

Query: 301 FKYSYNP 308
           FKYS NP
Sbjct: 301 FKYSNNP 307

[Close]

BLAST of CSPI01G08260 vs. ExPASy TrEMBL
Match: A0A6J1JWG0 (putative DNA glycosylase At3g47830 OS=Cucurbita maxima OX=3661 GN=LOC111490296 PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 1.0e-144
Identity = 261/307 (85.02%), Postives = 281/307 (91.53%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDGPQFKSIRTVNGFNCSTIDPYPAHSSPTSDECLSVRD 60
           MKKTT KKRRLQKPEP  DSHS+GP+ KSIRTVNGF+CST +PYPA+SSPTSDECLSVRD
Sbjct: 1   MKKTTCKKRRLQKPEPDGDSHSNGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVDEKESVLDGLVKTVL 120
           DLLNLHGFPREF+ YRKERERLSECCSVVDG   E  +NV+S      ESVLDGLV+TVL
Sbjct: 61  DLLNLHGFPREFVIYRKERERLSECCSVVDGSGGELAENVKS------ESVLDGLVRTVL 120

Query: 121 SQNTTEANSERAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSK 180
           SQNTTEANSE+AFASLKSAFA WEDVLSAESKCIEDAIRCGGLA TKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSEKAFASLKSAFATWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSIDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240
           RRGKLCLE+L +LSIDE+KAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVF+IAKF+G
Sbjct: 181 RRGKLCLEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIG 240

Query: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKT-GTRQRRGSEEQSCP 300
           WVPD+ADRNKTYLHLN+RIPNHLKFDLNCLLYTHGKLCSKC+K+T G RQR+ SE QSCP
Sbjct: 241 WVPDEADRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGGRQRKVSENQSCP 300

Query: 301 LFKYSYN 307
           L KYS N
Sbjct: 301 LLKYSKN 301

[Close]

BLAST of CSPI01G08260 vs. NCBI nr
Match: XP_011651429.1 (putative DNA glycosylase At3g47830 [Cucumis sativus] >KGN64289.1 hypothetical protein Csa_013980 [Cucumis sativus])

HSP 1 Score: 625.2 bits (1611), Expect = 3.1e-175
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDGPQFKSIRTVNGFNCSTIDPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPPADSHSDGPQFKSIRTVNGFNCSTIDPYPAHSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDGPQFKSIRTVNGFNCSTIDPYPAHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVDEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVDEKESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVDEKESVLDGLVKTVL 120

Query: 121 SQNTTEANSERAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSK 180
           SQNTTEANSERAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSIDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240
           RRGKLCLEFLRDLSIDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG
Sbjct: 181 RRGKLCLEFLRDLSIDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240

Query: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGTRQRRGSEEQSCPL 300
           WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGTRQRRGSEEQSCPL
Sbjct: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGTRQRRGSEEQSCPL 300

Query: 301 FKYSYNP 308
           FKYSYNP
Sbjct: 301 FKYSYNP 307

[Close]

BLAST of CSPI01G08260 vs. NCBI nr
Match: XP_008438070.1 (PREDICTED: putative DNA glycosylase At3g47830 [Cucumis melo] >TYJ99137.1 putative DNA glycosylase [Cucumis melo var. makuwa])

HSP 1 Score: 589.3 bits (1518), Expect = 1.9e-164
Identity = 290/307 (94.46%), Postives = 294/307 (95.77%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDGPQFKSIRTVNGFNCSTIDPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPPADSHSD P+ KSIRTVNGFNCST +PYPAHSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVDEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECCS VDGVRAEH DNVESE V EKESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120

Query: 121 SQNTTEANSERAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSK 180
           SQNTTEANSERAF SLKSAF+ WEDVLSAESKCIEDAIRCGGLA TKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSIDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240
           RRGKLCLEFLRDLS+DEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG
Sbjct: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240

Query: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGTRQRRGSEEQSCPL 300
           WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTG RQR GSEEQSCPL
Sbjct: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL 300

Query: 301 FKYSYNP 308
           FKYS NP
Sbjct: 301 FKYSNNP 307

[Close]

BLAST of CSPI01G08260 vs. NCBI nr
Match: KAA0055207.1 (putative DNA glycosylase [Cucumis melo var. makuwa])

HSP 1 Score: 584.7 bits (1506), Expect = 4.6e-163
Identity = 287/307 (93.49%), Postives = 293/307 (95.44%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDGPQFKSIRTVNGFNCSTIDPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPPADSHSD P+ KSIRTVNGFNCST +PYP+HSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPSHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVDEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECC  VDGVRAEH DNVESE V EKESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCFFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120

Query: 121 SQNTTEANSERAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSK 180
           SQNTTEANSERAF SLKSAF+ WEDVLSAESKCIEDAIRCGGLA TKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSIDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240
           RRGKLCLEFLRDLS+DEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG
Sbjct: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240

Query: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGTRQRRGSEEQSCPL 300
           WVPDDADRNKTYLHLN+RIPNHLKFDLNCLLYTHGKLCSKCTKKTG RQR GSEEQSCPL
Sbjct: 241 WVPDDADRNKTYLHLNRRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL 300

Query: 301 FKYSYNP 308
           FKYS NP
Sbjct: 301 FKYSNNP 307

[Close]

BLAST of CSPI01G08260 vs. NCBI nr
Match: XP_038894941.1 (putative DNA glycosylase At3g47830 [Benincasa hispida])

HSP 1 Score: 557.8 bits (1436), Expect = 6.0e-155
Identity = 274/304 (90.13%), Postives = 286/304 (94.08%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDGPQFKSIRTVNGFNCSTIDPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEP  DS  +GP  KSIRTVNGFN ST DPYPAHSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPSPDSCFNGPPAKSIRTVNGFNFSTSDPYPAHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVDEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECCS+VDG R EHRDNVESE VDEKESVLDGLV+TVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCSIVDGGRGEHRDNVESEPVDEKESVLDGLVRTVL 120

Query: 121 SQNTTEANSERAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSK 180
           SQNTTEANSERAF+SLKSAFA WEDVLSAESK IEDAIRCGGLA TKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFSSLKSAFATWEDVLSAESKSIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSIDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240
           RRGKLCLE+L  LS+DEIK EL+TFKGIGPKTVACVLMFNLQKDDFPVDTHVF+IAKF+G
Sbjct: 181 RRGKLCLEYLHGLSVDEIKTELTTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIG 240

Query: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGTRQRRGSEEQSCPL 300
           WVPDDADRNKTYLHLN+RIPNHLKFDLNCLLYTHGKLCSKCTK+TG RQR+GSEEQSCPL
Sbjct: 241 WVPDDADRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTKRTGARQRKGSEEQSCPL 300

Query: 301 FKYS 305
           FKYS
Sbjct: 301 FKYS 304

[Close]

BLAST of CSPI01G08260 vs. NCBI nr
Match: KAG7012228.1 (putative DNA glycosylase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 527.3 bits (1357), Expect = 8.7e-146
Identity = 261/306 (85.29%), Postives = 281/306 (91.83%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDGPQFKSIRTVNGFNCSTIDPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEP  DS ++GP+ KSIRTVNGF+CST +PYPA+SSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPNGDSPANGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVDEKESVLDGLVKTVL 120
           DLLNLHGFPREF+KYRKERERLSECCSVVDG   E  +NV+S      ESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFVKYRKERERLSECCSVVDGSGGELAENVKS------ESVLDGLVKTVL 120

Query: 121 SQNTTEANSERAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSK 180
           SQNTTE NSE+AFASLKSAFAAWEDVLSAESKCIEDAIRCGGLA TKASCIKNILSSLSK
Sbjct: 121 SQNTTETNSEKAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLALTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSIDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240
           RRGKLCLE+L +LSIDE+KAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVF+IAKF+G
Sbjct: 181 RRGKLCLEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIG 240

Query: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGTRQRRGSEEQSCPL 300
           WVPD+ADRNKTYLHLN+RIPNHLKFDLNCLLYTHGKLCSKC+K+TG RQR+ SE Q CPL
Sbjct: 241 WVPDEADRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGRQRKVSENQPCPL 300

Query: 301 FKYSYN 307
            KYS N
Sbjct: 301 LKYSKN 300

[Close]

BLAST of CSPI01G08260 vs. TAIR 10
Match: AT3G47830.1 (DNA glycosylase superfamily protein )

HSP 1 Score: 330.5 bits (846), Expect = 1.5e-90
Identity = 176/296 (59.46%), Postives = 217/296 (73.31%), Query Frame = 0


Query: 7   KKRRLQKPEPPADSHSDGPQFKSIRTVNGFNCSTIDPYPAHSSPTSDECLSVRDDLLNLH 66
           K++RL K     D  S  P  KS  TV+G N     PYP    PT++EC  VRD LL+LH
Sbjct: 6   KRKRLNK----YDGESKTPANKS--TVDGGN-----PYPTLLRPTAEECRDVRDALLSLH 65

Query: 67  GFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVD--EKESVLDGLVKTVLSQNT 126
           GFP EF  YR++R R     S VD    + + N++SE ++  E+ESVLDGLVK +LSQNT
Sbjct: 66  GFPPEFANYRRQRLR---SFSAVDD--HDTQCNLKSETLNETEEESVLDGLVKILLSQNT 125

Query: 127 TEANSERAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSKRRGK 186
           TE+NS+RAFASLK+ F  W+DVL+AESK IE+AIRCGGLA  KA CIKNIL+ L   RG+
Sbjct: 126 TESNSQRAFASLKATFPKWDDVLNAESKSIENAIRCGGLAPKKAVCIKNILNRLQNERGR 185

Query: 187 LCLEFLRDLSIDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPD 246
           LCLE+LR LS++E+K ELS FKG+GPKTV+CVLMFNLQ +DFPVDTHVF+IAK +GWVP 
Sbjct: 186 LCLEYLRGLSVEEVKTELSHFKGVGPKTVSCVLMFNLQHNDFPVDTHVFEIAKALGWVPK 245

Query: 247 DADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGTRQRRGSEEQSCPL 301
            ADRNKTY+HLN++IP+ LKFDLNCLLYTHGK+CS C K     + + +    CPL
Sbjct: 246 TADRNKTYVHLNRKIPDELKFDLNCLLYTHGKICSNCKKNVAKPKAKVASPDDCPL 285

[Close]

BLAST of CSPI01G08260 vs. TAIR 10
Match: AT2G36490.1 (demeter-like 1 )

HSP 1 Score: 73.9 bits (180), Expect = 2.5e-13
Identity = 42/118 (35.59%), Postives = 63/118 (53.39%), Query Frame = 0


Query: 143  WEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSKRRGKLCLEFLRDLSIDEIKAEL 202
            W+ + +A+ K + + I+  G+    A  I+  L  L    G + LE+LRD+  D+ K  L
Sbjct: 885  WKAIRAADVKEVAETIKSRGMNHKLAERIQGFLDRLVNDHGSIDLEWLRDVPPDKAKEYL 944

Query: 203  STFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDADRNKTYLHLNKRIP 261
             +F G+G K+V CV +  L    FPVDT+V +IA  +GWVP         LHL +  P
Sbjct: 945  LSFNGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLEMYP 1002

[Close]

BLAST of CSPI01G08260 vs. TAIR 10
Match: AT3G10010.1 (demeter-like 2 )

HSP 1 Score: 70.9 bits (172), Expect = 2.1e-12
Identity = 52/161 (32.30%), Postives = 82/161 (50.93%), Query Frame = 0


Query: 101 ESEFVDEKESV-LDGLVKTVLSQNTTEANSERAFASLKSAFAAWEDVLSAESKCIEDAIR 160
           ES    +K+SV  D L K   S       +ER   ++      W+ +   +   I + I 
Sbjct: 779 ESAKSTQKKSVDWDSLRKEAESGGRKRERTERTMDTVD-----WDALRCTDVHKIANIII 838

Query: 161 CGGLASTKASCIKNILSSLSKRRGKLCLEFLRDLSIDEIKAELSTFKGIGPKTVACVLMF 220
             G+ +  A  IK  L+ L K+ G + LE+LRD+  D+ K  L +  G+G K+V CV + 
Sbjct: 839 KRGMNNMLAERIKAFLNRLVKKHGSIDLEWLRDVPPDKAKEYLLSINGLGLKSVECVRLL 898

Query: 221 NLQKDDFPVDTHVFQIAKFVGWVPDDADRNKTYLHLNKRIP 261
           +L +  FPVDT+V +IA  +GWVP     ++  +HL +  P
Sbjct: 899 SLHQIAFPVDTNVGRIAVRLGWVPLQPLPDELQMHLLELYP 934

[Close]

BLAST of CSPI01G08260 vs. TAIR 10
Match: AT5G04560.1 (HhH-GPD base excision DNA repair family protein )

HSP 1 Score: 67.4 bits (163), Expect = 2.3e-11
Identity = 42/118 (35.59%), Postives = 63/118 (53.39%), Query Frame = 0


Query: 143  WEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSKRRGKLCLEFLRDLSIDEIKAEL 202
            +E +  A    I +AI+  G+ +  A  IK+ L  + K  G + LE+LR+   D+ K  L
Sbjct: 1218 YEAIRRASISEISEAIKERGMNNMLAVRIKDFLERIVKDHGGIDLEWLRESPPDKAKDYL 1277

Query: 203  STFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDADRNKTYLHLNKRIP 261
             + +G+G K+V CV +  L    FPVDT+V +IA  +GWVP         LHL +  P
Sbjct: 1278 LSIRGLGLKSVECVRLLTLHNLAFPVDTNVGRIAVRMGWVPLQPLPESLQLHLLELYP 1335

[Close]

BLAST of CSPI01G08260 vs. TAIR 10
Match: AT5G04560.2 (HhH-GPD base excision DNA repair family protein )

HSP 1 Score: 67.4 bits (163), Expect = 2.3e-11
Identity = 42/118 (35.59%), Postives = 63/118 (53.39%), Query Frame = 0


Query: 143  WEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSKRRGKLCLEFLRDLSIDEIKAEL 202
            +E +  A    I +AI+  G+ +  A  IK+ L  + K  G + LE+LR+   D+ K  L
Sbjct: 1476 YEAIRRASISEISEAIKERGMNNMLAVRIKDFLERIVKDHGGIDLEWLRESPPDKAKDYL 1535

Query: 203  STFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDADRNKTYLHLNKRIP 261
             + +G+G K+V CV +  L    FPVDT+V +IA  +GWVP         LHL +  P
Sbjct: 1536 LSIRGLGLKSVECVRLLTLHNLAFPVDTNVGRIAVRMGWVPLQPLPESLQLHLLELYP 1593

The following BLAST results are available for this feature:

BLAST of CSPI01G08260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JCQ3	2.0e-89	59.46	Putative DNA glycosylase At3g47830 OS=Arabidopsis thaliana OX=3702 GN=At3g47830 ...	[more]
C7IW64	2.2e-14	31.90	Protein ROS1A OS=Oryza sativa subsp. japonica OX=39947 GN=ROS1A PE=1 SV=2	[more]
Q9SJQ6	3.5e-12	35.59	DNA glycosylase/AP lyase ROS1 OS=Arabidopsis thaliana OX=3702 GN=ROS1 PE=1 SV=2	[more]
B8YIE8	1.0e-11	37.29	Protein ROS1C OS=Oryza sativa subsp. japonica OX=39947 GN=ROS1C PE=2 SV=2	[more]
Q9SR66	2.9e-11	32.30	DEMETER-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=DML2 PE=3 SV=2	[more]

BLAST of CSPI01G08260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTF1	1.5e-175	100.00	ENDO3c domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045870 PE=4...	[more]
A0A5D3BJ43	9.0e-165	94.46	Putative DNA glycosylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3AW45	9.0e-165	94.46	putative DNA glycosylase At3g47830 OS=Cucumis melo OX=3656 GN=LOC103483287 PE=4 ...	[more]
A0A5A7UKV1	2.2e-163	93.49	Putative DNA glycosylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A6J1JWG0	1.0e-144	85.02	putative DNA glycosylase At3g47830 OS=Cucurbita maxima OX=3661 GN=LOC111490296 P...	[more]

BLAST of CSPI01G08260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651429.1	3.1e-175	100.00	putative DNA glycosylase At3g47830 [Cucumis sativus] >KGN64289.1 hypothetical pr...	[more]
XP_008438070.1	1.9e-164	94.46	PREDICTED: putative DNA glycosylase At3g47830 [Cucumis melo] >TYJ99137.1 putativ...	[more]
KAA0055207.1	4.6e-163	93.49	putative DNA glycosylase [Cucumis melo var. makuwa]	[more]
XP_038894941.1	6.0e-155	90.13	putative DNA glycosylase At3g47830 [Benincasa hispida]	[more]
KAG7012228.1	8.7e-146	85.29	putative DNA glycosylase [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CSPI01G08260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47830.1	1.5e-90	59.46	DNA glycosylase superfamily protein	[more]
AT2G36490.1	2.5e-13	35.59	demeter-like 1	[more]
AT3G10010.1	2.1e-12	32.30	demeter-like 2	[more]
AT5G04560.1	2.3e-11	35.59	HhH-GPD base excision DNA repair family protein	[more]
AT5G04560.2	2.3e-11	35.59	HhH-GPD base excision DNA repair family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003265	HhH-GPD domain	SMART	SM00478	endo3end	coord: 120..277 e-value: 3.4E-16 score: 69.8
IPR003265	HhH-GPD domain	PFAM	PF00730	HhH-GPD	coord: 116..260 e-value: 4.3E-10 score: 40.0
IPR003265	HhH-GPD domain	CDD	cd00056	ENDO3c	coord: 115..275 e-value: 2.57162E-27 score: 102.32
None	No IPR available	GENE3D	1.10.340.30	Hypothetical protein; domain 2	coord: 107..227 e-value: 8.4E-39 score: 135.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR47203	FAMILY NOT NAMED	coord: 7..304
IPR023170	Helix-hairpin-helix, base-excision DNA repair, C-terminal	GENE3D	1.10.1670.10		coord: 228..278 e-value: 8.4E-39 score: 135.5
IPR011257	DNA glycosylase	SUPERFAMILY	48150	DNA-glycosylase	coord: 92..284

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G08260.1	CSPI01G08260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006284	base-excision repair
biological_process	GO:0006281	DNA repair
molecular_function	GO:0019104	DNA N-glycosylase activity
molecular_function	GO:0003824	catalytic activity