BhiUN548G15 (gene) Wax gourd (B227) v1

Overview
NameBhiUN548G15
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptionprotein LATE FLOWERING-like
LocationContig548: 434535 .. 434963 (-)
RNA-Seq ExpressionBhiUN548G15
SyntenyBhiUN548G15
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGATCCAACCATTTACGACTTCCTTACCCAAACAACCACTACTCCTTCTATTCTTCTTCCAAATCTTCCAGAAAATCTCACTCTCAATACACTTCCCCTCGCATTTTTCCATGTCTTACTGCCCTCGCAAATTTTACATTCTCAAGCCCTAGGCGGCCACCAAATGCTCACAAGCGAAGAAAGAGCCGCCTCTCGTAAGCATTTCACCTCTGAAATTCTTCACCCGCTTCACTTCAACACTCTCCCCCGCCGACCCATCACTCATCATCATCATCATCTTCCGCCGCACTATCCACCACCTCCCACTCCAGCTGCTTTCTCGACGACCATTGGTTTCATCAGAATCATTTCCGTGCTAACACCACCACCAACGCCTCGCCCGATGCTCTCTCTCCGAACACCGATACTTCCCTTGAACATGTAA

mRNA sequence

ATGGCGGATCCAACCATTTACGACTTCCTTACCCAAACAACCACTACTCCTTCTATTCTTCTTCCAAATCTTCCAGAAAATCTCACTCTCAATACACTTCCCCTCGCATTTTTCCATGTCTTACTGCCCTCGCAAATTTTACATTCTCAAGCCCTAGGCGGCCACCAAATGCTCACAAGCGAAGAAAGAGCCGCCTCTCGTAAGCATTTCACCTCTGAAATTCTTCACCCGCTTCACTTCAACACTCTCCCCCGCCGACCCATCACTCATCATCATCATCATCTTCCGCCGCACTATCCACCACCTCCCACTCCAGCTGCTTTCTCGACGACCATTGGTTTCATCAGAATCATTTCCGTGCTAACACCACCACCAACGCCTCGCCCGATGCTCTCTCTCCGAACACCGATACTTCCCTTGAACATGTAA

Coding sequence (CDS)

ATGGCGGATCCAACCATTTACGACTTCCTTACCCAAACAACCACTACTCCTTCTATTCTTCTTCCAAATCTTCCAGAAAATCTCACTCTCAATACACTTCCCCTCGCATTTTTCCATGTCTTACTGCCCTCGCAAATTTTACATTCTCAAGCCCTAGGCGGCCACCAAATGCTCACAAGCGAAGAAAGAGCCGCCTCTCGTAAGCATTTCACCTCTGAAATTCTTCACCCGCTTCACTTCAACACTCTCCCCCGCCGACCCATCACTCATCATCATCATCATCTTCCGCCGCACTATCCACCACCTCCCACTCCAGCTGCTTTCTCGACGACCATTGGTTTCATCAGAATCATTTCCGTGCTAACACCACCACCAACGCCTCGCCCGATGCTCTCTCTCCGAACACCGATACTTCCCTTGAACATGTAA

Protein sequence

MADPTIYDFLTQTTTTPSILLPNLPENLTLNTLPLAFFHVLLPSQILHSQALGGHQMLTSEERAASRKHFTSEILHPLHFNTLPRRPITHHHHHLPPHYPPPPTPAAFSTTIGFIRIISVLTPPPTPRPMLSLRTPILPLNM
Homology
BLAST of BhiUN548G15 vs. NCBI nr
Match: KGN58096.1 (hypothetical protein Csa_017649 [Cucumis sativus])

HSP 1 Score: 79.3 bits (194), Expect = 2.9e-11
Identity = 59/122 (48.36%), Postives = 69/122 (56.56%), Query Frame = 0

Query: 1   MADPTIYDFLTQTTTTP----SILLPNLPENLTLNTLPLAFFHVLLPSQILHSQALGGHQ 60
           MADPTIYDFL+QTTT P    S  LP    +   ++    F  +  P +   SQALGGHQ
Sbjct: 1   MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQ 60

Query: 61  MLTSEER-AASRKH---FTSEILH----PLHFNTLPRRP--ITHHHHHLPPHYPPPPTPA 109
                ER AASRK     T+EILH     L  +  P  P  ITHHHHHLPPH+ P PTP 
Sbjct: 61  NAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPPPPPTTITHHHHHLPPHFYPLPTPP 120

BLAST of BhiUN548G15 vs. NCBI nr
Match: XP_023529006.1 (protein LATE FLOWERING-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 69.3 bits (168), Expect = 3.0e-08
Identity = 53/113 (46.90%), Postives = 59/113 (52.21%), Query Frame = 0

Query: 1   MADPTIYDFLTQTTTTPSILLPNLPENLTLNTLPLAFFHVLLPSQILHSQALGGHQMLTS 60
           MADP IYDFLTQTTT  +       +  +  +    F  +  P +   SQALGGHQ    
Sbjct: 1   MADPAIYDFLTQTTTASNSATKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  EERAASRKHFTSEILHPLHFNTLPRRPITHHHHHLPPHYP--PPPTPAAFSTT 112
            ERAASRK F SEILH L     P  P T  HHHLP  Y   P PTP    TT
Sbjct: 61  RERAASRKAFASEILH-LGSLPPPPPPPTTAHHHLPQPYTVVPAPTPTPTPTT 112

BLAST of BhiUN548G15 vs. NCBI nr
Match: XP_022983390.1 (protein LATE FLOWERING-like [Cucurbita maxima])

HSP 1 Score: 68.2 bits (165), Expect = 6.7e-08
Identity = 55/113 (48.67%), Postives = 58/113 (51.33%), Query Frame = 0

Query: 1   MADPTIYDFLTQTTTTPSILLPNLPENLTLNTLPLAFFHVL-LPSQILHSQALGGHQMLT 60
           MADP IYDFLTQTTT  S   P               F  L  P +   SQALGGHQ   
Sbjct: 1   MADPAIYDFLTQTTTA-SNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAH 60

Query: 61  SEERAASRKHFTSEILHPLHFNTLPRRP--ITHHHHHLPPHY----PPPPTPA 107
             ERAASRK F SEI   LH  +LP +P   T  HHHLP  Y     P PTPA
Sbjct: 61  KRERAASRKAFASEI---LHLGSLPPQPTTTTMTHHHLPQPYTVAPAPTPTPA 109

BLAST of BhiUN548G15 vs. NCBI nr
Match: XP_023530190.1 (zinc finger protein 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 67.8 bits (164), Expect = 8.7e-08
Identity = 47/107 (43.93%), Postives = 59/107 (55.14%), Query Frame = 0

Query: 1   MADPTIYDFLTQTTTTPSILLPNLPENLTLNTLPLAFFHVLLPSQILHSQALGGHQMLTS 60
           MADP IYDFL+QT  + S+      ++ +  +    F  +  P +   SQALGGHQ    
Sbjct: 1   MADPAIYDFLSQTNASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  EERAASRKHFTSEILH--PLHFNTLPRRPITHHHHHLPPHYPPPPTP 106
            ERAASRK FTSEILH   LH +  P  P T+HH   P    P P+P
Sbjct: 61  RERAASRKAFTSEILHLGSLHHSRPPPPPTTYHHLASPSATAPAPSP 107

BLAST of BhiUN548G15 vs. NCBI nr
Match: KAG6581122.1 (Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 67.0 bits (162), Expect = 1.5e-07
Identity = 56/120 (46.67%), Postives = 58/120 (48.33%), Query Frame = 0

Query: 1   MADPTIYDFLTQTTTTPSILLPNLPENLTLNTLPLAFFHVL-LPSQILHSQALGGHQMLT 60
           MADP IYDFLTQTTT  S   P               F  L  P +   SQALGGHQ   
Sbjct: 1   MADPAIYDFLTQTTTA-SNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAH 60

Query: 61  SEERAASRKHFTSEILHPLHFNTLPRRP------ITHHHHHLPPHY--PPPPTPAAFSTT 112
             ERAASRK F SEI   LH  +LP  P       T  HHHLP  Y   P PTP    TT
Sbjct: 61  KRERAASRKAFASEI---LHLGSLPPPPPPPTTTTTTTHHHLPQPYTVAPAPTPIPTPTT 116

BLAST of BhiUN548G15 vs. ExPASy TrEMBL
Match: A0A0A0LDF1 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G509430 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.4e-11
Identity = 59/122 (48.36%), Postives = 69/122 (56.56%), Query Frame = 0

Query: 1   MADPTIYDFLTQTTTTP----SILLPNLPENLTLNTLPLAFFHVLLPSQILHSQALGGHQ 60
           MADPTIYDFL+QTTT P    S  LP    +   ++    F  +  P +   SQALGGHQ
Sbjct: 1   MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQ 60

Query: 61  MLTSEER-AASRKH---FTSEILH----PLHFNTLPRRP--ITHHHHHLPPHYPPPPTPA 109
                ER AASRK     T+EILH     L  +  P  P  ITHHHHHLPPH+ P PTP 
Sbjct: 61  NAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPPPPPTTITHHHHHLPPHFYPLPTPP 120

BLAST of BhiUN548G15 vs. ExPASy TrEMBL
Match: A0A6J1J5R2 (protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111481997 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 3.2e-08
Identity = 55/113 (48.67%), Postives = 58/113 (51.33%), Query Frame = 0

Query: 1   MADPTIYDFLTQTTTTPSILLPNLPENLTLNTLPLAFFHVL-LPSQILHSQALGGHQMLT 60
           MADP IYDFLTQTTT  S   P               F  L  P +   SQALGGHQ   
Sbjct: 1   MADPAIYDFLTQTTTA-SNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAH 60

Query: 61  SEERAASRKHFTSEILHPLHFNTLPRRP--ITHHHHHLPPHY----PPPPTPA 107
             ERAASRK F SEI   LH  +LP +P   T  HHHLP  Y     P PTPA
Sbjct: 61  KRERAASRKAFASEI---LHLGSLPPQPTTTTMTHHHLPQPYTVAPAPTPTPA 109

BLAST of BhiUN548G15 vs. ExPASy TrEMBL
Match: A0A6J1F843 (protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111441721 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 7.2e-08
Identity = 56/130 (43.08%), Postives = 58/130 (44.62%), Query Frame = 0

Query: 1   MADPTIYDFLTQTTTTPSILLPNLPENLTLNTLPLAFFHVL-LPSQILHSQALGGHQMLT 60
           MADP IYDFLTQTTT  S   P               F  L  P +   SQALGGHQ   
Sbjct: 1   MADPAIYDFLTQTTTA-SNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAH 60

Query: 61  SEERAASRKHFTSEILHPLHFNTLPRRPITHHHHHLPPHYPPPPTPAAFSTTIGFIRIIS 120
             ERAASRK F SEILH       P    T  HHHLP  Y   P+P              
Sbjct: 61  KRERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYTVAPSP-------------- 113

Query: 121 VLTPPPTPRP 130
             TP PTP P
Sbjct: 121 --TPTPTPAP 113

BLAST of BhiUN548G15 vs. ExPASy TrEMBL
Match: A0A6J1EJQ6 (protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111435120 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.0e-06
Identity = 44/99 (44.44%), Postives = 55/99 (55.56%), Query Frame = 0

Query: 1  MADPTIYDFLTQTTTTPSILLPNLPENLTLNTLPLAFFHVLLPSQILHSQALGGHQMLTS 60
          MADP IYDFL+QTT + S+      ++ +  +    F  +  P +   SQALGGHQ    
Sbjct: 1  MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61 EERAASRKHFTSEILH--PLHFNTLPRRPITHHHHHLPP 98
           ERAASRK FTSEILH   L  +  P  P T +HH   P
Sbjct: 61 RERAASRKAFTSEILHLGSLQHSRPPPPPPTTYHHLASP 99

BLAST of BhiUN548G15 vs. ExPASy TrEMBL
Match: A0A6J1JQI7 (protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111486586 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.4e-06
Identity = 44/99 (44.44%), Postives = 55/99 (55.56%), Query Frame = 0

Query: 1  MADPTIYDFLTQTTTTPSILLPNLPENLTLNTLPLAFFHVLLPSQILHSQALGGHQMLTS 60
          MADP IYDFL+QTT + S+      ++ +  +    F  +  P +   SQALGGHQ    
Sbjct: 1  MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61 EERAASRKHFTSEILH--PLHFNTLPRRPITHHHHHLPP 98
           ERAASRK FTSEILH   L  +  P  P T +HH   P
Sbjct: 61 RERAASRKVFTSEILHLGSLQHSRPPPPPPTTYHHLASP 99

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KGN58096.12.9e-1148.36hypothetical protein Csa_017649 [Cucumis sativus][more]
XP_023529006.13.0e-0846.90protein LATE FLOWERING-like [Cucurbita pepo subsp. pepo][more]
XP_022983390.16.7e-0848.67protein LATE FLOWERING-like [Cucurbita maxima][more]
XP_023530190.18.7e-0843.93zinc finger protein 7-like [Cucurbita pepo subsp. pepo][more]
KAG6581122.11.5e-0746.67Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. sororia][more]
Match NameE-valueIdentityDescription
A0A0A0LDF11.4e-1148.36C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G509430 P... [more]
A0A6J1J5R23.2e-0848.67protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111481997 PE=4 SV=... [more]
A0A6J1F8437.2e-0843.08protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111441721 PE=4 S... [more]
A0A6J1EJQ61.0e-0644.44protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111435120 PE=4 S... [more]
A0A6J1JQI71.4e-0644.44protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111486586 PE=4 SV=... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
BhiUN548M15BhiUN548M15mRNA