BhiUN533G6 (gene) Wax gourd (B227) v1

Overview


Name	BhiUN533G6
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	AT-hook motif nuclear-localized protein 20-like
Location	Contig533: 133189 .. 133494 (-)
RNA-Seq Expression	BhiUN533G6
Synteny	BhiUN533G6

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGATGCAAAGAGAAAAACCACTGCAGGATCCCAGAGCCAGGTGCCGACACGGCTGCAGAGCCAGGCTCCGGCATCGATTGAGATAAAGCGGGCGCCGAATTGGAACGTGGCTATACCATTGTTATCCCCTCTTGTATCACCGTCGTGTTGTGGGAATTCAGGGCAAGAGGGAGCGTTGTTAATGGCTGAGAATAAGGCGAGGGAGGAGGCCAAAGGGCTAACCTTTAACAAATGGCAGCACCCTGCGGCTCCATTTTATTATGGGCCAGTCCCAAGGGCCACCCCCTTTGTGCCTGTGTGA

mRNA sequence

ATGGCCGATGCAAAGAGAAAAACCACTGCAGGATCCCAGAGCCAGGTGCCGACACGGCTGCAGAGCCAGGCTCCGGCATCGATTGAGATAAAGCGGGCGCCGAATTGGAACGTGGCTATACCATTGTTATCCCCTCTTGTATCACCGTCGTGTTGTGGGAATTCAGGGCAAGAGGGAGCGTTGTTAATGGCTGAGAATAAGGCGAGGGAGGAGGCCAAAGGGCTAACCTTTAACAAATGGCAGCACCCTGCGGCTCCATTTTATTATGGGCCAGTCCCAAGGGCCACCCCCTTTGTGCCTGTGTGA

Coding sequence (CDS)

ATGGCCGATGCAAAGAGAAAAACCACTGCAGGATCCCAGAGCCAGGTGCCGACACGGCTGCAGAGCCAGGCTCCGGCATCGATTGAGATAAAGCGGGCGCCGAATTGGAACGTGGCTATACCATTGTTATCCCCTCTTGTATCACCGTCGTGTTGTGGGAATTCAGGGCAAGAGGGAGCGTTGTTAATGGCTGAGAATAAGGCGAGGGAGGAGGCCAAAGGGCTAACCTTTAACAAATGGCAGCACCCTGCGGCTCCATTTTATTATGGGCCAGTCCCAAGGGCCACCCCCTTTGTGCCTGTGTGA

Protein sequence

MADAKRKTTAGSQSQVPTRLQSQAPASIEIKRAPNWNVAIPLLSPLVSPSCCGNSGQEGALLMAENKAREEAKGLTFNKWQHPAAPFYYGPVPRATPFVPV

Homology

[Close]

BLAST of BhiUN533G6 vs. TAIR 10
Match: AT1G04330.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.3 bits (155), Expect = 6.4e-11
Identity = 41/97 (42.27%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 7  KTTAGSQSQVPTRLQSQAPASIEIKRA-PNWNVAIPLLSPLVSPSCCGNSGQEGALLMAE 66
          +  +GS ++  +RLQ +AP  ++I     NW VAIPLLSP  SP       Q+   +M  
Sbjct: 6  RNISGSGNRKSSRLQRRAPPPLKINPCEANWKVAIPLLSPTESPP------QKPPAVMKR 65

Query: 67 NKAR---EEAKGLTFNKWQHPAAPFYYGPVPRAT-PF 99
           + R   E  K   F KWQHPAAPFYY P P +  PF
Sbjct: 66 EEQRWGKEAEKPPVFKKWQHPAAPFYYQPAPSSNQPF 96

[Close]

BLAST of BhiUN533G6 vs. TAIR 10
Match: AT3G23170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14450.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 59.3 bits (142), Expect = 2.1e-09
Identity = 39/96 (40.62%), Postives = 50/96 (52.08%), Query Frame = 0


Query: 10  AGSQSQVPTRLQSQAPASIEIKRAP---NWNVAIPLLSPL-VSPSCCGNSGQEGALLMAE 69
           +G   + P+RL  + PA   +   P   NWN AIPLLSPL +SP    +   +  +   +
Sbjct: 14  SGDLRRQPSRLLKRPPALKIVPATPAANNWNTAIPLLSPLALSPE--SSPVDQPPVEKNQ 73

Query: 70  NKAREEAKGLTFNKWQHPAAPFYYGPVPRATPFVPV 102
           + A    K   F KWQHPAAPFYY       PFVPV
Sbjct: 74  STAVAVEKTPVFKKWQHPAAPFYYESSTFVPPFVPV 107

[Close]

BLAST of BhiUN533G6 vs. TAIR 10
Match: AT4G14450.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 7.8e-09
Identity = 43/109 (39.45%), Postives = 59/109 (54.13%), Query Frame = 0


Query: 1   MADAKRKT--TAGSQSQVPTRLQSQAPA-SIEIKRAPNWNVAIPLLSPLVSPSCCGNSGQ 60
           MA   ++T  +A S  +  ++LQ +AP+  I+     NWNVAIPLLSPL +PS   +S  
Sbjct: 19  MASTMQRTSSSAASNERQLSQLQRRAPSLMIKPTSFSNWNVAIPLLSPL-APSLT-SSFD 78

Query: 61  EGALLMAENKA-----REEAKGLTFNKWQHPAAPFYYGPVPRATPFVPV 102
           +  +   +NK       E  K   F KWQHPA+PF Y P     PF+ V
Sbjct: 79  QSHVPPPQNKTEIPVEEEVKKTPVFKKWQHPASPFCYEPTTFVPPFIQV 125

[Close]

BLAST of BhiUN533G6 vs. ExPASy Swiss-Prot
Match: Q6NN02 (Uncharacterized protein At4g14450, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g14450 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.1e-07
Identity = 43/109 (39.45%), Postives = 59/109 (54.13%), Query Frame = 0


Query: 1   MADAKRKT--TAGSQSQVPTRLQSQAPA-SIEIKRAPNWNVAIPLLSPLVSPSCCGNSGQ 60
           MA   ++T  +A S  +  ++LQ +AP+  I+     NWNVAIPLLSPL +PS   +S  
Sbjct: 19  MASTMQRTSSSAASNERQLSQLQRRAPSLMIKPTSFSNWNVAIPLLSPL-APSLT-SSFD 78

Query: 61  EGALLMAENKA-----REEAKGLTFNKWQHPAAPFYYGPVPRATPFVPV 102
           +  +   +NK       E  K   F KWQHPA+PF Y P     PF+ V
Sbjct: 79  QSHVPPPQNKTEIPVEEEVKKTPVFKKWQHPASPFCYEPTTFVPPFIQV 125

[Close]

BLAST of BhiUN533G6 vs. NCBI nr
Match: KAE8650334.1 (hypothetical protein Csa_009641 [Cucumis sativus])

HSP 1 Score: 153.3 bits (386), Expect = 1.1e-33
Identity = 79/101 (78.22%), Postives = 83/101 (82.18%), Query Frame = 0


Query: 1   MADAKRKTTAGSQSQVPTRLQSQAPASIEIKRAPNWNVAIPLLSPLVSPSCCGNSGQEGA 60
           M+DA+RKT   + +  PTRLQSQAPASIEIKRA NWNVAIPLLSPLVSPS CGNS  E  
Sbjct: 1   MSDAERKT---ATTVAPTRLQSQAPASIEIKRALNWNVAIPLLSPLVSPSSCGNSAPEKM 60

Query: 61  LLMAENKAREEAKGLTFNKWQHPAAPFYYGPVPRATPFVPV 102
           L MAEN AREE KGLTF KWQHPAAPFYY PVPRA PFVPV
Sbjct: 61  LSMAENNAREETKGLTFTKWQHPAAPFYYEPVPRANPFVPV 98

[Close]

BLAST of BhiUN533G6 vs. NCBI nr
Match: KAA0049279.1 (hypothetical protein E6C27_scaffold171G005190 [Cucumis melo var. makuwa] >TYK17278.1 hypothetical protein E5676_scaffold434G001320 [Cucumis melo var. makuwa])

HSP 1 Score: 146.4 bits (368), Expect = 1.4e-31
Identity = 75/101 (74.26%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 1   MADAKRKTTAGSQSQVPTRLQSQAPASIEIKRAPNWNVAIPLLSPLVSPSCCGNSGQEGA 60
           M+DA+RKT     +  PTRLQSQAPASIEIKR  +WNV IPLLSPLVSPS CGNSG E  
Sbjct: 1   MSDAERKTA----NPAPTRLQSQAPASIEIKRVLDWNVVIPLLSPLVSPSSCGNSGPEKV 60

Query: 61  LLMAENKAREEAKGLTFNKWQHPAAPFYYGPVPRATPFVPV 102
           L MA+N AREE KGLTF KWQHPAAPFYY PVPRA  FVPV
Sbjct: 61  LSMADNNAREENKGLTFTKWQHPAAPFYYEPVPRANAFVPV 97

[Close]

BLAST of BhiUN533G6 vs. NCBI nr
Match: XP_022143991.1 (uncharacterized protein At4g14450, chloroplastic-like [Momordica charantia])

HSP 1 Score: 115.5 bits (288), Expect = 2.6e-22
Identity = 63/105 (60.00%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 1   MADAKRKTTAGSQSQVPTRLQSQAPASIEIKRAPNWNVAIPLLSPLVSPSCCGNSGQEGA 60
           M DA+R+    S SQ  TRLQ +AP+SI+I R  +WNVAIPLLSPLVSP       ++  
Sbjct: 1   MGDAERRGAGDSVSQEATRLQRRAPSSIQISRPASWNVAIPLLSPLVSPCL-----EQVD 60

Query: 61  LLMAENKAREEA----KGLTFNKWQHPAAPFYYGPVPRATPFVPV 102
           +LM ENKAREEA    K  TF +W+HPAAPFYYGPV R TPFVPV
Sbjct: 61  VLMGENKAREEARSRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV 100

[Close]

BLAST of BhiUN533G6 vs. NCBI nr
Match: KAG6582368.1 (AT-hook motif nuclear-localized protein 20, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018779.1 AT-hook motif nuclear-localized protein 20, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 115.5 bits (288), Expect = 2.6e-22
Identity = 65/101 (64.36%), Postives = 71/101 (70.30%), Query Frame = 0


Query: 1   MADAKRKTTAGSQSQVPTRLQSQAPASIEIKRAPNWNVAIPLLSPLVSPSCCGNSGQEGA 60
           MA ++R+ T       PTRLQSQAPASI I RA NWNVAIPLL+PLVS S CGNS Q+  
Sbjct: 1   MAGSERRNTP------PTRLQSQAPASIVINRASNWNVAIPLLTPLVSASPCGNSSQD-V 60

Query: 61  LLMAENKAREEAKGLTFNKWQHPAAPFYYGPVPRATPFVPV 102
           LLM ENKAREE       KWQHPA P Y GP+P  TPFVPV
Sbjct: 61  LLMGENKAREE------TKWQHPACPLYDGPLPMGTPFVPV 88

[Close]

BLAST of BhiUN533G6 vs. NCBI nr
Match: XP_023526926.1 (AT-hook motif nuclear-localized protein 20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 111.7 bits (278), Expect = 3.7e-21
Identity = 61/91 (67.03%), Postives = 66/91 (72.53%), Query Frame = 0


Query: 1  MADAKRKTTAGSQSQVPTRLQSQAPASIEIKRAPNWNVAIPLLSPLVSPSCCGNSGQEGA 60
          MA ++R+ T       PTRLQSQAPASI I RA NWNVAIPLL+PLVS S CGNS Q+  
Sbjct: 1  MAGSERRNTP------PTRLQSQAPASIVINRASNWNVAIPLLTPLVSASPCGNSSQD-V 60

Query: 61 LLMAENKAREEAKGLTFNKWQHPAAPFYYGP 92
          LL AENKAREE KGLT  KWQHPA PF   P
Sbjct: 61 LLTAENKAREETKGLTVTKWQHPACPFLANP 84

[Close]

BLAST of BhiUN533G6 vs. ExPASy TrEMBL
Match: A0A0A0L8D3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G141830 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.4e-34
Identity = 79/101 (78.22%), Postives = 83/101 (82.18%), Query Frame = 0


Query: 1   MADAKRKTTAGSQSQVPTRLQSQAPASIEIKRAPNWNVAIPLLSPLVSPSCCGNSGQEGA 60
           M+DA+RKT   + +  PTRLQSQAPASIEIKRA NWNVAIPLLSPLVSPS CGNS  E  
Sbjct: 1   MSDAERKT---ATTVAPTRLQSQAPASIEIKRALNWNVAIPLLSPLVSPSSCGNSAPEKM 60

Query: 61  LLMAENKAREEAKGLTFNKWQHPAAPFYYGPVPRATPFVPV 102
           L MAEN AREE KGLTF KWQHPAAPFYY PVPRA PFVPV
Sbjct: 61  LSMAENNAREETKGLTFTKWQHPAAPFYYEPVPRANPFVPV 98

[Close]

BLAST of BhiUN533G6 vs. ExPASy TrEMBL
Match: A0A5D3D1A6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001320 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 6.6e-32
Identity = 75/101 (74.26%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 1   MADAKRKTTAGSQSQVPTRLQSQAPASIEIKRAPNWNVAIPLLSPLVSPSCCGNSGQEGA 60
           M+DA+RKT     +  PTRLQSQAPASIEIKR  +WNV IPLLSPLVSPS CGNSG E  
Sbjct: 1   MSDAERKTA----NPAPTRLQSQAPASIEIKRVLDWNVVIPLLSPLVSPSSCGNSGPEKV 60

Query: 61  LLMAENKAREEAKGLTFNKWQHPAAPFYYGPVPRATPFVPV 102
           L MA+N AREE KGLTF KWQHPAAPFYY PVPRA  FVPV
Sbjct: 61  LSMADNNAREENKGLTFTKWQHPAAPFYYEPVPRANAFVPV 97

[Close]

BLAST of BhiUN533G6 vs. ExPASy TrEMBL
Match: A0A6J1CRZ0 (uncharacterized protein At4g14450, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111013769 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.3e-22
Identity = 63/105 (60.00%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 1   MADAKRKTTAGSQSQVPTRLQSQAPASIEIKRAPNWNVAIPLLSPLVSPSCCGNSGQEGA 60
           M DA+R+    S SQ  TRLQ +AP+SI+I R  +WNVAIPLLSPLVSP       ++  
Sbjct: 1   MGDAERRGAGDSVSQEATRLQRRAPSSIQISRPASWNVAIPLLSPLVSPCL-----EQVD 60

Query: 61  LLMAENKAREEA----KGLTFNKWQHPAAPFYYGPVPRATPFVPV 102
           +LM ENKAREEA    K  TF +W+HPAAPFYYGPV R TPFVPV
Sbjct: 61  VLMGENKAREEARSRDKPATFTRWKHPAAPFYYGPVQRTTPFVPV 100

[Close]

BLAST of BhiUN533G6 vs. ExPASy TrEMBL
Match: A0A6J1E8H9 (AT-hook motif nuclear-localized protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111431828 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 4.0e-21
Identity = 60/91 (65.93%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 1  MADAKRKTTAGSQSQVPTRLQSQAPASIEIKRAPNWNVAIPLLSPLVSPSCCGNSGQEGA 60
          MA ++R+ T       PTRLQSQAPASI I RA NWNVAIPLL+PLVS S CGNS Q+  
Sbjct: 1  MAGSERRNTP------PTRLQSQAPASIVINRASNWNVAIPLLTPLVSASPCGNSSQD-V 60

Query: 61 LLMAENKAREEAKGLTFNKWQHPAAPFYYGP 92
          LLM ENKAREE KGL   KWQHPA PF   P
Sbjct: 61 LLMGENKAREETKGLNVTKWQHPACPFLANP 84

[Close]

BLAST of BhiUN533G6 vs. ExPASy TrEMBL
Match: A0A2P5FLQ7 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_056140 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 8.7e-16
Identity = 53/109 (48.62%), Postives = 65/109 (59.63%), Query Frame = 0


Query: 1   MADAKRKTTAGSQSQVPTRLQSQAPASIEIKRAPNWNVAIPLLSPLVSPSCCGNSGQEGA 60
           MAD  R T+     + P+RLQ +APAS++I+   +WNVAIPLLSPL SPS    S  +  
Sbjct: 1   MADVTRPTSGACPRRQPSRLQRRAPASLQIRPVSDWNVAIPLLSPLASPS----SSPKAL 60

Query: 61  LLMAENKAREEA--------KGLTFNKWQHPAAPFYYGPVPRATPFVPV 102
              AE K+RE+         K + F KWQHPAAPF Y P P   PFVPV
Sbjct: 61  DRTAEIKSREDQRRQVAEPDKPIVFKKWQHPAAPFCYEPAPLVRPFVPV 105

The following BLAST results are available for this feature:

BLAST of BhiUN533G6 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04330.1	6.4e-11	42.27	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G23170.1	2.1e-09	40.63	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G14450.1	7.8e-09	39.45	unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc...	[more]

BLAST of BhiUN533G6 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NN02	1.1e-07	39.45	Uncharacterized protein At4g14450, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of BhiUN533G6 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650334.1	1.1e-33	78.22	hypothetical protein Csa_009641 [Cucumis sativus]	[more]
KAA0049279.1	1.4e-31	74.26	hypothetical protein E6C27_scaffold171G005190 [Cucumis melo var. makuwa] >TYK172...	[more]
XP_022143991.1	2.6e-22	60.00	uncharacterized protein At4g14450, chloroplastic-like [Momordica charantia]	[more]
KAG6582368.1	2.6e-22	64.36	AT-hook motif nuclear-localized protein 20, partial [Cucurbita argyrosperma subs...	[more]
XP_023526926.1	3.7e-21	67.03	AT-hook motif nuclear-localized protein 20-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of BhiUN533G6 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8D3	5.4e-34	78.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G141830 PE=4 SV=1	[more]
A0A5D3D1A6	6.6e-32	74.26	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1CRZ0	1.3e-22	60.00	uncharacterized protein At4g14450, chloroplastic-like OS=Momordica charantia OX=...	[more]
A0A6J1E8H9	4.0e-21	65.93	AT-hook motif nuclear-localized protein 20-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A2P5FLQ7	8.7e-16	48.62	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_056140 PE=4 SV...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR33912:SF2	PUTATIVE-RELATED	coord: 1..101
IPR040381	Uncharacterized protein At4g14450-like	PANTHER	PTHR33912	OS01G0939400 PROTEIN	coord: 1..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
BhiUN533M6	BhiUN533M6	mRNA