Bhi12G001455 (gene) Wax gourd (B227) v1

Overview
NameBhi12G001455
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr12: 53097947 .. 53098282 (+)
RNA-Seq ExpressionBhi12G001455
SyntenyBhi12G001455
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGACTCACACAGACGAACCTCCGGTGCCAGCGGCCGCCATCCCCAGCAGCCAAGCCGCCTTCAACGCCGGGCTCCGGCGTCCCTGCAAATCAACCGCTCCGATTGGAAGGTCGCCATCCCTCTCTTGTCCCCGCTCGTCTCTCCTTCCTCTCCTAAAGATATTCAAAATTGGACGCCCGATTCAAGAGAAGCTTCCTCCAGTTCTTCTCAGCACCATCATCATAAAGAATCGGAGCCGGAGAAGCCGCCGGTTTTTAAGAAATGGCAGCATCCGGCGGCTCCTTTCCATTACGATTCCGGTCCTAGGGCCCCCAGATTCGTACCCGTTTAG

mRNA sequence

ATGGCCGACTCACACAGACGAACCTCCGGTGCCAGCGGCCGCCATCCCCAGCAGCCAAGCCGCCTTCAACGCCGGGCTCCGGCGTCCCTGCAAATCAACCGCTCCGATTGGAAGGTCGCCATCCCTCTCTTGTCCCCGCTCGTCTCTCCTTCCTCTCCTAAAGATATTCAAAATTGGACGCCCGATTCAAGAGAAGCTTCCTCCAGTTCTTCTCAGCACCATCATCATAAAGAATCGGAGCCGGAGAAGCCGCCGGTTTTTAAGAAATGGCAGCATCCGGCGGCTCCTTTCCATTACGATTCCGGTCCTAGGGCCCCCAGATTCGTACCCGTTTAG

Coding sequence (CDS)

ATGGCCGACTCACACAGACGAACCTCCGGTGCCAGCGGCCGCCATCCCCAGCAGCCAAGCCGCCTTCAACGCCGGGCTCCGGCGTCCCTGCAAATCAACCGCTCCGATTGGAAGGTCGCCATCCCTCTCTTGTCCCCGCTCGTCTCTCCTTCCTCTCCTAAAGATATTCAAAATTGGACGCCCGATTCAAGAGAAGCTTCCTCCAGTTCTTCTCAGCACCATCATCATAAAGAATCGGAGCCGGAGAAGCCGCCGGTTTTTAAGAAATGGCAGCATCCGGCGGCTCCTTTCCATTACGATTCCGGTCCTAGGGCCCCCAGATTCGTACCCGTTTAG

Protein sequence

MADSHRRTSGASGRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSREASSSSSQHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV
Homology
BLAST of Bhi12G001455 vs. TAIR 10
Match: AT1G04330.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.2 bits (178), Expect = 1.5e-13
Identity = 50/105 (47.62%), Postives = 60/105 (57.14%), Query Frame = 0

Query: 1   MADSHRRTSGASGRHPQQPSRLQRRAPASLQIN--RSDWKVAIPLLSPLVSPSSPKDIQN 60
           M+ + R  SG+  R   + SRLQRRAP  L+IN   ++WKVAIPLLSP  SP        
Sbjct: 1   MSSTARNISGSGNR---KSSRLQRRAPPPLKINPCEANWKVAIPLLSPTESP-------- 60

Query: 61  WTPDSREASSSSSQHHHHKESEPEKPPVFKKWQHPAAPFHYDSGP 104
             P    A     +    KE+  EKPPVFKKWQHPAAPF+Y   P
Sbjct: 61  --PQKPPAVMKREEQRWGKEA--EKPPVFKKWQHPAAPFYYQPAP 90

BLAST of Bhi12G001455 vs. TAIR 10
Match: AT4G14450.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-11
Identity = 45/113 (39.82%), Postives = 64/113 (56.64%), Query Frame = 0

Query: 1   MADSHRRTSGASGRHPQQPSRLQRRAPASL--QINRSDWKVAIPLLSPLVSPSSPKDIQN 60
           MA + +RTS ++  + +Q S+LQRRAP+ +    + S+W VAIPLLSPL    +    Q+
Sbjct: 19  MASTMQRTSSSAASNERQLSQLQRRAPSLMIKPTSFSNWNVAIPLLSPLAPSLTSSFDQS 78

Query: 61  WTPDSREASSSSSQHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV 112
             P  +  +          E E +K PVFKKWQHPA+PF Y+     P F+ V
Sbjct: 79  HVPPPQNKTEIP------VEEEVKKTPVFKKWQHPASPFCYEPTTFVPPFIQV 125

BLAST of Bhi12G001455 vs. TAIR 10
Match: AT3G23170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14450.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.9 bits (154), Expect = 9.2e-11
Identity = 44/107 (41.12%), Postives = 55/107 (51.40%), Query Frame = 0

Query: 9   SGASGRHPQQPSRLQRRAPASLQI----NRSDWKVAIPLLSPLVSPSSPKDIQNWTPDSR 68
           S  SG   +QPSRL +R PA   +      ++W  AIPLLSPL            +P+S 
Sbjct: 11  SSDSGDLRRQPSRLLKRPPALKIVPATPAANNWNTAIPLLSPLA----------LSPESS 70

Query: 69  EASSSSSQHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV 112
                  + +       EK PVFKKWQHPAAPF+Y+S    P FVPV
Sbjct: 71  PVDQPPVEKNQSTAVAVEKTPVFKKWQHPAAPFYYESSTFVPPFVPV 107

BLAST of Bhi12G001455 vs. ExPASy Swiss-Prot
Match: Q6NN02 (Uncharacterized protein At4g14450, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g14450 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.5e-10
Identity = 45/113 (39.82%), Postives = 64/113 (56.64%), Query Frame = 0

Query: 1   MADSHRRTSGASGRHPQQPSRLQRRAPASL--QINRSDWKVAIPLLSPLVSPSSPKDIQN 60
           MA + +RTS ++  + +Q S+LQRRAP+ +    + S+W VAIPLLSPL    +    Q+
Sbjct: 19  MASTMQRTSSSAASNERQLSQLQRRAPSLMIKPTSFSNWNVAIPLLSPLAPSLTSSFDQS 78

Query: 61  WTPDSREASSSSSQHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV 112
             P  +  +          E E +K PVFKKWQHPA+PF Y+     P F+ V
Sbjct: 79  HVPPPQNKTEIP------VEEEVKKTPVFKKWQHPASPFCYEPTTFVPPFIQV 125

BLAST of Bhi12G001455 vs. NCBI nr
Match: XP_038875425.1 (uncharacterized protein At4g14450, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 225.7 bits (574), Expect = 2.0e-55
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0

Query: 1   MADSHRRTSGASGRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWT 60
           MADSHRRTSGASGRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWT
Sbjct: 1   MADSHRRTSGASGRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWT 60

Query: 61  PDSREASSSSSQHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV 112
           PDSREASSSSSQHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV
Sbjct: 61  PDSREASSSSSQHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV 111

BLAST of Bhi12G001455 vs. NCBI nr
Match: XP_008460625.2 (PREDICTED: uncharacterized protein At4g14450, chloroplastic-like [Cucumis melo])

HSP 1 Score: 194.1 bits (492), Expect = 6.3e-46
Identity = 102/127 (80.31%), Postives = 104/127 (81.89%), Query Frame = 0

Query: 1   MADSHRRTSGASGRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWT 60
           MADSHRRTS  + RHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWT
Sbjct: 1   MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWT 60

Query: 61  PDSREASSSSS----------------QHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPR 112
           PDSREASS+SS                QH HHKE E EK PVFKKWQHPAAPFHYDSGPR
Sbjct: 61  PDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKAPVFKKWQHPAAPFHYDSGPR 120

BLAST of Bhi12G001455 vs. NCBI nr
Match: XP_023000559.1 (uncharacterized protein At4g14450, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 174.1 bits (440), Expect = 6.7e-40
Identity = 95/116 (81.90%), Postives = 99/116 (85.34%), Query Frame = 0

Query: 1   MADSHRRTSGASGRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWT 60
           MA+S RR SGA+ R  QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQNWT
Sbjct: 1   MAESQRRASGAAAR-KQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWT 60

Query: 61  PDSREASSSSS----QHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPR-FVPV 112
            DS   SSSSS     HHHHKESEPEKPPVFKKWQHPAAPFHYDSG RAPR FVPV
Sbjct: 61  ADSGSISSSSSHHHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAFVPV 115

BLAST of Bhi12G001455 vs. NCBI nr
Match: XP_022930471.1 (uncharacterized protein At4g14450, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 172.9 bits (437), Expect = 1.5e-39
Identity = 94/114 (82.46%), Postives = 98/114 (85.96%), Query Frame = 0

Query: 1   MADSHRRTSGASGRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWT 60
           MA+S RR SG + R  QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQNWT
Sbjct: 1   MAESQRRPSGTAAR-KQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWT 60

Query: 61  PDSREASSSSS--QHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPR-FVPV 112
            DS   SSSSS   HHHHKESEPEKPPVFKKWQHPAAPFHYDSG RAPR FVPV
Sbjct: 61  ADSGSISSSSSHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAFVPV 113

BLAST of Bhi12G001455 vs. NCBI nr
Match: KAG6593848.1 (putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026180.1 putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 171.8 bits (434), Expect = 3.3e-39
Identity = 94/117 (80.34%), Postives = 98/117 (83.76%), Query Frame = 0

Query: 1   MADSHRRTSGASGRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWT 60
           MA+S RR SG + R  QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQNWT
Sbjct: 1   MAESQRRPSGTAAR-KQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWT 60

Query: 61  PDSREASSSSS-----QHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPR-FVPV 112
            DS   SSSSS      HHHHKESEPEKPPVFKKWQHPAAPFHYDSG RAPR FVPV
Sbjct: 61  ADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAFVPV 116

BLAST of Bhi12G001455 vs. ExPASy TrEMBL
Match: A0A1S3CDB1 (uncharacterized protein At4g14450, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103499403 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.0e-46
Identity = 102/127 (80.31%), Postives = 104/127 (81.89%), Query Frame = 0

Query: 1   MADSHRRTSGASGRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWT 60
           MADSHRRTS  + RHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWT
Sbjct: 1   MADSHRRTSPTTTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWT 60

Query: 61  PDSREASSSSS----------------QHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPR 112
           PDSREASS+SS                QH HHKE E EK PVFKKWQHPAAPFHYDSGPR
Sbjct: 61  PDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKAPVFKKWQHPAAPFHYDSGPR 120

BLAST of Bhi12G001455 vs. ExPASy TrEMBL
Match: A0A6J1KKB8 (uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111494801 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.3e-40
Identity = 95/116 (81.90%), Postives = 99/116 (85.34%), Query Frame = 0

Query: 1   MADSHRRTSGASGRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWT 60
           MA+S RR SGA+ R  QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQNWT
Sbjct: 1   MAESQRRASGAAAR-KQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWT 60

Query: 61  PDSREASSSSS----QHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPR-FVPV 112
            DS   SSSSS     HHHHKESEPEKPPVFKKWQHPAAPFHYDSG RAPR FVPV
Sbjct: 61  ADSGSISSSSSHHHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAFVPV 115

BLAST of Bhi12G001455 vs. ExPASy TrEMBL
Match: A0A6J1ER11 (uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111436912 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 7.3e-40
Identity = 94/114 (82.46%), Postives = 98/114 (85.96%), Query Frame = 0

Query: 1   MADSHRRTSGASGRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQNWT 60
           MA+S RR SG + R  QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQNWT
Sbjct: 1   MAESQRRPSGTAAR-KQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWT 60

Query: 61  PDSREASSSSS--QHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPR-FVPV 112
            DS   SSSSS   HHHHKESEPEKPPVFKKWQHPAAPFHYDSG RAPR FVPV
Sbjct: 61  ADSGSISSSSSHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAFVPV 113

BLAST of Bhi12G001455 vs. ExPASy TrEMBL
Match: A0A0A0LLJ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G190740 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.7e-36
Identity = 91/123 (73.98%), Postives = 97/123 (78.86%), Query Frame = 0

Query: 1   MADSHRRTSGASGRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSP-SSPKDIQNW 60
           MADSH  TS A+      PSRLQRRAPASLQINRSDWKVAIPLLSPLVSP SSPKDI +W
Sbjct: 1   MADSHPPTSPAA-----TPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIHSW 60

Query: 61  -TPDSREASSSSS----------QHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRF 112
            TPDSR+ SS++S           HHHHKES+PEK PVFKKWQHPAAPFHYDSG RAPRF
Sbjct: 61  STPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPVFKKWQHPAAPFHYDSGARAPRF 118

BLAST of Bhi12G001455 vs. ExPASy TrEMBL
Match: A0A6J1H320 (uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111459957 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.7e-36
Identity = 87/116 (75.00%), Postives = 94/116 (81.03%), Query Frame = 0

Query: 1   MADSHRRTS---GASGRHP---QQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPK 60
           MADSHRRTS   GAS RHP   QQP   + RAPASLQINR DWKVAIPLL+PLVSPSSPK
Sbjct: 37  MADSHRRTSTPAGASRRHPPPQQQPGCFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPK 96

Query: 61  DIQNWTPDSREASSSSSQHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVP 111
           +IQ W P+S E SS+SS   +HKESEPEKPPVFKKWQHPAAPF YDSGP  PRF+P
Sbjct: 97  EIQTWAPNSGEGSSNSS---NHKESEPEKPPVFKKWQHPAAPFQYDSGPMDPRFIP 149

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G04330.11.5e-1347.62unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G14450.11.1e-1139.82unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc... [more]
AT3G23170.19.2e-1141.12unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
Match NameE-valueIdentityDescription
Q6NN021.5e-1039.82Uncharacterized protein At4g14450, chloroplastic OS=Arabidopsis thaliana OX=3702... [more]
Match NameE-valueIdentityDescription
XP_038875425.12.0e-55100.00uncharacterized protein At4g14450, chloroplastic-like [Benincasa hispida][more]
XP_008460625.26.3e-4680.31PREDICTED: uncharacterized protein At4g14450, chloroplastic-like [Cucumis melo][more]
XP_023000559.16.7e-4081.90uncharacterized protein At4g14450, chloroplastic-like [Cucurbita maxima][more]
XP_022930471.11.5e-3982.46uncharacterized protein At4g14450, chloroplastic-like [Cucurbita moschata][more]
KAG6593848.13.3e-3980.34putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]... [more]
Match NameE-valueIdentityDescription
A0A1S3CDB13.0e-4680.31uncharacterized protein At4g14450, chloroplastic-like OS=Cucumis melo OX=3656 GN... [more]
A0A6J1KKB83.3e-4081.90uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita maxima OX=366... [more]
A0A6J1ER117.3e-4082.46uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita moschata OX=3... [more]
A0A0A0LLJ83.7e-3673.98Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G190740 PE=4 SV=1[more]
A0A6J1H3203.7e-3675.00uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita moschata OX=3... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..67
NoneNo IPR availablePANTHERPTHR33912:SF2PUTATIVE-RELATEDcoord: 1..110
IPR040381Uncharacterized protein At4g14450-likePANTHERPTHR33912OS01G0939400 PROTEINcoord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M001455Bhi12M001455mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus