Bhi12G001359 (gene) Wax gourd (B227) v1

Overview
NameBhi12G001359
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionMonocarboxylate transporter 9
Locationchr12: 50219849 .. 50220074 (+)
RNA-Seq ExpressionBhi12G001359
SyntenyBhi12G001359
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAATAATGCCCTTGGAAGTTCCAACTCCCAAGTCCCACATCGAAAAGAAGCTGGTTGGTGAATGCGTTAGTGCCTATATAAACCTATCAGTCTTCACATTTGAAGCCACGGAGTCGTGCGGTGGGCACAGAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCGCCGCTATAAGCGGCATACGCCTATTTTTGGAGGGTCCTCCCTTTATG

mRNA sequence

ATGTCAATAATGCCCTTGGAAGTTCCAACTCCCAAGTCCCACATCGAAAAGAAGCTGCCACGGAGTCGTGCGGTGGGCACAGAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCGCCGCTATAAGCGGCATACGCCTATTTTTGGAGGGTCCTCCCTTTATG

Coding sequence (CDS)

ATGTCAATAATGCCCTTGGAAGTTCCAACTCCCAAGTCCCACATCGAAAAGAAGCTGCCACGGAGTCGTGCGGTGGGCACAGAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCGCCGCTATAAGCGGCATACGCCTATTTTTGGAGGGTCCTCCCTTTATG

Protein sequence

MSIMPLEVPTPKSHIEKKLPRSRAVGTERTILSPFTKEYRVLAAISGIRLFLEGPPFM
Homology
[Close]
BLAST of Bhi12G001359 vs. NCBI nr
Match: PPR85392.1 (hypothetical protein GOBAR_AA35300 [Gossypium barbadense])

HSP 1 Score: 66.2 bits (160), Expect = 1.0e-07
Identity = 33/37 (89.19%), Postives = 34/37 (91.89%), Query Frame = 0 

Query: 21  RSRAVGTERTILSPFTKEYRVLAAISGIRLFLEGPPF 58
           RSRAVGTERTILSPFTKEYRVLAA+ GIRLFLEG  F
Sbjct: 108 RSRAVGTERTILSPFTKEYRVLAALCGIRLFLEGCSF 144

[Close]
BLAST of Bhi12G001359 vs. NCBI nr
Match: OMP02649.1 (monocarboxylate transporter 9 [Corchorus olitorius])

HSP 1 Score: 65.5 bits (158), Expect = 1.8e-07
Identity = 34/38 (89.47%), Postives = 35/38 (92.11%), Query Frame = 0 

Query: 21 RSRAVGTERTILSPFTKEYRVLAAISGIRLFLEGP-PF 58
          RSRAV TERTILSPFTKEYRVLAA+SGIRLFL GP PF
Sbjct: 5  RSRAVSTERTILSPFTKEYRVLAALSGIRLFLGGPFPF 42

[Close]
BLAST of Bhi12G001359 vs. NCBI nr
Match: OMO58839.1 (hypothetical protein CCACVL1_25320, partial [Corchorus capsularis])

HSP 1 Score: 65.1 bits (157), Expect = 2.3e-07
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 0 

Query: 21 RSRAVGTERTILSPFTKEYRVLAAISGIRLFLEGP 56
          RSRAV TERTILSPFTKEYRVLAA+SGIRLFL GP
Sbjct: 5  RSRAVSTERTILSPFTKEYRVLAALSGIRLFLGGP 39

[Close]
BLAST of Bhi12G001359 vs. NCBI nr
Match: KAG8498941.1 (hypothetical protein CXB51_005368 [Gossypium anomalum])

HSP 1 Score: 64.3 bits (155), Expect = 3.9e-07
Identity = 32/37 (86.49%), Postives = 33/37 (89.19%), Query Frame = 0 

Query: 21  RSRAVGTERTILSPFTKEYRVLAAISGIRLFLEGPPF 58
           RSRAVGTERTILSPFTKEYRVLAA+ GI LFLEG  F
Sbjct: 211 RSRAVGTERTILSPFTKEYRVLAALCGIHLFLEGCSF 247

[Close]
BLAST of Bhi12G001359 vs. NCBI nr
Match: GAY49587.1 (hypothetical protein CUMW_120240 [Citrus unshiu])

HSP 1 Score: 63.2 bits (152), Expect = 8.8e-07
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 21 RSRAVGTERTILSPFTKEYRVLAAISGIRLFLEG 55
          RSRAV TERTILSPFTKEYRVLAA SGIRLFLEG
Sbjct: 9  RSRAVSTERTILSPFTKEYRVLAAESGIRLFLEG 42

[Close]
BLAST of Bhi12G001359 vs. ExPASy TrEMBL
Match: A0A2P5W2R8 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA35300 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.0e-08
Identity = 33/37 (89.19%), Postives = 34/37 (91.89%), Query Frame = 0 

Query: 21  RSRAVGTERTILSPFTKEYRVLAAISGIRLFLEGPPF 58
           RSRAVGTERTILSPFTKEYRVLAA+ GIRLFLEG  F
Sbjct: 108 RSRAVGTERTILSPFTKEYRVLAALCGIRLFLEGCSF 144

[Close]
BLAST of Bhi12G001359 vs. ExPASy TrEMBL
Match: A0A1R3K6E7 (Monocarboxylate transporter 9 OS=Corchorus olitorius OX=93759 GN=COLO4_10930 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.5e-08
Identity = 34/38 (89.47%), Postives = 35/38 (92.11%), Query Frame = 0 

Query: 21 RSRAVGTERTILSPFTKEYRVLAAISGIRLFLEGP-PF 58
          RSRAV TERTILSPFTKEYRVLAA+SGIRLFL GP PF
Sbjct: 5  RSRAVSTERTILSPFTKEYRVLAALSGIRLFLGGPFPF 42

[Close]
BLAST of Bhi12G001359 vs. ExPASy TrEMBL
Match: A0A1R3GLA3 (Uncharacterized protein (Fragment) OS=Corchorus capsularis OX=210143 GN=CCACVL1_25320 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-07
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 0 

Query: 21 RSRAVGTERTILSPFTKEYRVLAAISGIRLFLEGP 56
          RSRAV TERTILSPFTKEYRVLAA+SGIRLFL GP
Sbjct: 5  RSRAVSTERTILSPFTKEYRVLAALSGIRLFLGGP 39

[Close]
BLAST of Bhi12G001359 vs. ExPASy TrEMBL
Match: A0A5A7URK2 (Monocarboxylate transporter 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00740 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.2e-07
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 21 RSRAVGTERTILSPFTKEYRVLAAISGIRLFLEG 55
          RSRAV TERTILSPFTKEYRVLAA SGIRLFLEG
Sbjct: 42 RSRAVRTERTILSPFTKEYRVLAAYSGIRLFLEG 75

[Close]
BLAST of Bhi12G001359 vs. ExPASy TrEMBL
Match: A0A2H5PB56 (DYW_deaminase domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_120240 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.2e-07
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 21 RSRAVGTERTILSPFTKEYRVLAAISGIRLFLEG 55
          RSRAV TERTILSPFTKEYRVLAA SGIRLFLEG
Sbjct: 9  RSRAVSTERTILSPFTKEYRVLAAESGIRLFLEG 42

The following BLAST results are available for this feature:
BLAST of Bhi12G001359 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi12G001359 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi12G001359 vs. NCBI nr
Match NameE-valueIdentityDescription
PPR85392.11.0e-0789.19hypothetical protein GOBAR_AA35300 [Gossypium barbadense][more]
OMP02649.11.8e-0789.47monocarboxylate transporter 9 [Corchorus olitorius][more]
OMO58839.12.3e-0791.43hypothetical protein CCACVL1_25320, partial [Corchorus capsularis][more]
KAG8498941.13.9e-0786.49hypothetical protein CXB51_005368 [Gossypium anomalum][more]
GAY49587.18.8e-0794.12hypothetical protein CUMW_120240 [Citrus unshiu][more]
BLAST of Bhi12G001359 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2P5W2R85.0e-0889.19Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA35300 PE=4 SV... [more]
A0A1R3K6E78.5e-0889.47Monocarboxylate transporter 9 OS=Corchorus olitorius OX=93759 GN=COLO4_10930 PE=... [more]
A0A1R3GLA31.1e-0791.43Uncharacterized protein (Fragment) OS=Corchorus capsularis OX=210143 GN=CCACVL1_... [more]
A0A5A7URK24.2e-0794.12Monocarboxylate transporter 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A2H5PB564.2e-0794.12DYW_deaminase domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_120240... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M001359Bhi12M001359mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003723 RNA binding
molecular_function GO:0008270 zinc ion binding